Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:24:13 (4034610): wrapper (7.7.26015): starting
21:24:13 (4034610): wrapper: running run_atlas (--nthreads 8)
[2025-04-03 21:24:13] Arguments: --nthreads 8
[2025-04-03 21:24:13] Threads: 8
[2025-04-03 21:24:13] Checking for CVMFS
[2025-04-03 21:24:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 21:24:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 21:24:15] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 21:24:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 21:24:16] 2.12.6.0 1669502 56238 942472 144471 3 276 29868514 32935937 30663 130560 0 20431493 99.722 11730827 11805 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-03 21:24:16] CVMFS is ok
[2025-04-03 21:24:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-03 21:24:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-03 21:24:16] Further information can be found at the LHC@home message board.
[2025-04-03 21:24:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 21:24:16] Checking for apptainer binary...
[2025-04-03 21:24:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 21:24:16] Running /usr/bin/apptainer --version
[2025-04-03 21:24:16] apptainer version 1.4.0-1.el9
[2025-04-03 21:24:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 21:24:17] lc-12-33.aglt2.org
[2025-04-03 21:24:17] apptainer works
[2025-04-03 21:24:17] Set ATHENA_PROC_NUMBER=8
[2025-04-03 21:24:17] Set ATHENA_CORE_NUMBER=8
[2025-04-03 21:24:17] Starting ATLAS job with PandaID=6586324293
[2025-04-03 21:24:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 08:33:17]  *** The last 200 lines of the pilot log: ***
[2025-04-04 08:33:17] 2025-04-04 12:32:50,166 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 08:33:17] 2025-04-04 12:32:50,883 | INFO     | PID=4047986 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-04 08:33:17] 2025-04-04 12:32:50,883 | INFO     | .. there are 52 such processes running
[2025-04-04 08:33:17] 2025-04-04 12:32:52,685 | INFO     | monitor loop #1898: job 0:6586324293 is in state 'finished'
[2025-04-04 08:33:17] 2025-04-04 12:32:52,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 08:33:17] 2025-04-04 12:32:55,233 | INFO     | monitor loop #1899: job 0:6586324293 is in state 'finished'
[2025-04-04 08:33:17] 2025-04-04 12:32:55,234 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 08:33:17] 2025-04-04 12:32:55,688 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-04 08:33:17] 2025-04-04 12:32:55,688 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6586324293/memory_monitor_summary.json (trf name=prmon)
[2025-04-04 08:33:17] 2025-04-04 12:32:55,689 | INFO     | extracted standard info from prmon json
[2025-04-04 08:33:17] 2025-04-04 12:32:55,689 | INFO     | extracted standard memory fields from prmon json
[2025-04-04 08:33:17] 2025-04-04 12:32:55,689 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-04 08:33:17] 2025-04-04 12:32:55,690 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-04 08:33:17] 2025-04-04 12:32:55,690 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-04 08:33:17] 2025-04-04 12:32:55,747 | INFO     | fitting pss+swap vs Time
[2025-04-04 08:33:17] 2025-04-04 12:32:55,752 | INFO     | sum of square deviations: 86340937336.39221
[2025-04-04 08:33:17] 2025-04-04 12:32:55,773 | INFO     | sum of deviations: 448932890845.79626
[2025-04-04 08:33:17] 2025-04-04 12:32:55,774 | INFO     | mean x: 1743749999.3491578
[2025-04-04 08:33:17] 2025-04-04 12:32:55,774 | INFO     | mean y: 2133210.0842266465
[2025-04-04 08:33:17] 2025-04-04 12:32:55,774 | INFO     | -- intersect: -9064559279.831745
[2025-04-04 08:33:17] 2025-04-04 12:32:55,774 | INFO     | intersect: -9064559279.831745
[2025-04-04 08:33:17] 2025-04-04 12:32:55,775 | INFO     | chi2: 8.610105426653213
[2025-04-04 08:33:17] 2025-04-04 12:32:55,776 | INFO     | sum of square deviations: 84372821135.77754
[2025-04-04 08:33:17] 2025-04-04 12:32:55,793 | INFO     | sum of deviations: 530701524640.22205
[2025-04-04 08:33:17] 2025-04-04 12:32:55,793 | INFO     | mean x: 1743749846.851852
[2025-04-04 08:33:17] 2025-04-04 12:32:55,794 | INFO     | mean y: 2139522.5231481483
[2025-04-04 08:33:17] 2025-04-04 12:32:55,794 | INFO     | -- intersect: -10965974259.357016
[2025-04-04 08:33:17] 2025-04-04 12:32:55,794 | INFO     | intersect: -10965974259.357016
[2025-04-04 08:33:17] 2025-04-04 12:32:55,799 | INFO     | chi2: 7.012692220888101
[2025-04-04 08:33:17] 2025-04-04 12:32:55,799 | INFO     | current chi2=7.012692220888101 (change=18.552771732854772 %)
[2025-04-04 08:33:17] 2025-04-04 12:32:55,799 | INFO     | right removable region: 647
[2025-04-04 08:33:17] 2025-04-04 12:32:55,800 | INFO     | sum of square deviations: 84372682055.7776
[2025-04-04 08:33:17] 2025-04-04 12:32:55,822 | INFO     | sum of deviations: 296965845146.11115
[2025-04-04 08:33:17] 2025-04-04 12:32:55,822 | INFO     | mean x: 1743750151.851852
[2025-04-04 08:33:17] 2025-04-04 12:32:55,823 | INFO     | mean y: 2144974.324074074
[2025-04-04 08:33:17] 2025-04-04 12:32:55,823 | INFO     | -- intersect: -6135318301.123445
[2025-04-04 08:33:17] 2025-04-04 12:32:55,823 | INFO     | intersect: -6135318301.123445
[2025-04-04 08:33:17] 2025-04-04 12:32:55,824 | INFO     | chi2: 5.850418176757902
[2025-04-04 08:33:17] 2025-04-04 12:32:55,824 | INFO     | current chi2=5.850418176757902 (change=32.051724260570566 %)
[2025-04-04 08:33:17] 2025-04-04 12:32:55,825 | INFO     | sum of square deviations: 82434645808.56602
[2025-04-04 08:33:17] 2025-04-04 12:32:55,868 | INFO     | sum of deviations: 183923908761.1182
[2025-04-04 08:33:17] 2025-04-04 12:32:55,868 | INFO     | mean x: 1743750304.3514774
[2025-04-04 08:33:17] 2025-04-04 12:32:55,868 | INFO     | mean y: 2153866.8755832035
[2025-04-04 08:33:17] 2025-04-04 12:32:55,868 | INFO     | -- intersect: -3888411425.592581
[2025-04-04 08:33:17] 2025-04-04 12:32:55,868 | INFO     | intersect: -3888411425.592581
[2025-04-04 08:33:17] 2025-04-04 12:32:55,869 | INFO     | chi2: 4.423426165501548
[2025-04-04 08:33:17] 2025-04-04 12:32:55,869 | INFO     | current chi2=4.423426165501548 (change=24.39128226637542 %)
[2025-04-04 08:33:17] 2025-04-04 12:32:55,869 | INFO     | left removable region: 20
[2025-04-04 08:33:17] 2025-04-04 12:32:55,898 | INFO     | sum of square deviations: 76432793463.68759
[2025-04-04 08:33:17] 2025-04-04 12:32:55,938 | INFO     | sum of deviations: 85220669371.34148
[2025-04-04 08:33:17] 2025-04-04 12:32:55,961 | INFO     | mean x: 1743750426.3556619
[2025-04-04 08:33:17] 2025-04-04 12:32:55,961 | INFO     | mean y: 2176038.2137161084
[2025-04-04 08:33:17] 2025-04-04 12:32:55,961 | INFO     | -- intersect: -1942062446.5564578
[2025-04-04 08:33:17] 2025-04-04 12:32:55,961 | INFO     | intersect: -1942062446.5564578
[2025-04-04 08:33:17] 2025-04-04 12:32:55,962 | INFO     | chi2: 0.7881794296137187
[2025-04-04 08:33:17] 2025-04-04 12:32:55,962 | INFO     | -- intersect: -1942062446.5564578
[2025-04-04 08:33:17] 2025-04-04 12:32:55,963 | INFO     | current memory leak: 1.11 B/s (using 627 data points, chi2=0.79)
[2025-04-04 08:33:17] 2025-04-04 12:32:55,964 | INFO     | ..............................
[2025-04-04 08:33:17] 2025-04-04 12:32:55,964 | INFO     | . Timing measurements:
[2025-04-04 08:33:17] 2025-04-04 12:32:55,964 | INFO     | . get job = 0 s
[2025-04-04 08:33:17] 2025-04-04 12:32:55,986 | INFO     | . initial setup = 7 s
[2025-04-04 08:33:17] 2025-04-04 12:32:55,987 | INFO     | . payload setup = 52 s
[2025-04-04 08:33:17] 2025-04-04 12:32:55,987 | INFO     | . stage-in = 0 s
[2025-04-04 08:33:17] 2025-04-04 12:32:55,987 | INFO     | . payload execution = 39848 s
[2025-04-04 08:33:17] 2025-04-04 12:32:55,987 | INFO     | . stage-out = 7 s
[2025-04-04 08:33:17] 2025-04-04 12:32:55,987 | INFO     | . log creation = 0 s
[2025-04-04 08:33:17] 2025-04-04 12:32:55,987 | INFO     | ..............................
[2025-04-04 08:33:17] 2025-04-04 12:32:56,332 | INFO     | 
[2025-04-04 08:33:17] 2025-04-04 12:32:56,332 | INFO     | job summary report
[2025-04-04 08:33:17] 2025-04-04 12:32:56,332 | INFO     | --------------------------------------------------
[2025-04-04 08:33:17] 2025-04-04 12:32:56,333 | INFO     | PanDA job id: 6586324293
[2025-04-04 08:33:17] 2025-04-04 12:32:56,333 | INFO     | task id: 43634898
[2025-04-04 08:33:17] 2025-04-04 12:32:56,333 | INFO     | errors: (none)
[2025-04-04 08:33:17] 2025-04-04 12:32:56,333 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 08:33:17] 2025-04-04 12:32:56,333 | INFO     | pilot state: finished 
[2025-04-04 08:33:17] 2025-04-04 12:32:56,333 | INFO     | transexitcode: 0
[2025-04-04 08:33:17] 2025-04-04 12:32:56,333 | INFO     | exeerrorcode: 0
[2025-04-04 08:33:17] 2025-04-04 12:32:56,333 | INFO     | exeerrordiag: 
[2025-04-04 08:33:17] 2025-04-04 12:32:56,333 | INFO     | exitcode: 0
[2025-04-04 08:33:17] 2025-04-04 12:32:56,333 | INFO     | exitmsg: OK
[2025-04-04 08:33:17] 2025-04-04 12:32:56,333 | INFO     | cpuconsumptiontime: 85707 s
[2025-04-04 08:33:17] 2025-04-04 12:32:56,333 | INFO     | nevents: 400
[2025-04-04 08:33:17] 2025-04-04 12:32:56,333 | INFO     | neventsw: 0
[2025-04-04 08:33:17] 2025-04-04 12:32:56,333 | INFO     | pid: 4092336
[2025-04-04 08:33:17] 2025-04-04 12:32:56,334 | INFO     | pgrp: 4092336
[2025-04-04 08:33:17] 2025-04-04 12:32:56,334 | INFO     | corecount: 8
[2025-04-04 08:33:17] 2025-04-04 12:32:56,334 | INFO     | event service: False
[2025-04-04 08:33:17] 2025-04-04 12:32:56,334 | INFO     | sizes: {0: 2417170, 1: 2417226, 3: 2417453, 4: 2417453, 15: 2417481, 26: 2417509, 38: 2417665, 40: 2417899, 49: 2417927, 39907: 2458739, 39915: 2467680, 39916: 246
[2025-04-04 08:33:17] 2025-04-04 12:32:56,334 | INFO     | --------------------------------------------------
[2025-04-04 08:33:17] 2025-04-04 12:32:56,334 | INFO     | 
[2025-04-04 08:33:17] 2025-04-04 12:32:56,334 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-04-04 08:33:17] 2025-04-04 12:32:56,458 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,458 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,458 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,458 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,458 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,459 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,459 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,459 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,459 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,459 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,459 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,459 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,459 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,459 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,459 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,459 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,459 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,460 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 08:33:17] 2025-04-04 12:32:56,460 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,460 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 08:33:17] 2025-04-04 12:32:56,460 | INFO     | job 6586324293 has completed (purged errors)
[2025-04-04 08:33:17] 2025-04-04 12:32:56,460 | INFO     | overall cleanup function is called
[2025-04-04 08:33:17] 2025-04-04 12:32:57,473 | INFO     | --- collectZombieJob: --- 10, [4092336]
[2025-04-04 08:33:17] 2025-04-04 12:32:57,474 | INFO     | zombie collector waiting for pid 4092336
[2025-04-04 08:33:17] 2025-04-04 12:32:57,474 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 08:33:17] 2025-04-04 12:32:57,474 | INFO     | collected zombie processes
[2025-04-04 08:33:17] 2025-04-04 12:32:57,474 | INFO     | will attempt to kill all subprocesses of pid=4092336
[2025-04-04 08:33:17] 2025-04-04 12:32:58,481 | INFO     | process IDs to be killed: [4092336] (in reverse order)
[2025-04-04 08:33:17] 2025-04-04 12:32:59,894 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 08:33:17] 2025-04-04 12:32:59,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 08:33:17] 2025-04-04 12:33:00,132 | INFO     | did not find any defunct processes belonging to 4092336
[2025-04-04 08:33:17] 2025-04-04 12:33:00,354 | INFO     | did not find any defunct processes belonging to 4092336
[2025-04-04 08:33:17] 2025-04-04 12:33:00,378 | INFO     | ready for new job
[2025-04-04 08:33:17] 2025-04-04 12:33:00,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 08:33:17] 2025-04-04 12:33:00,381 | INFO     | **************************************
[2025-04-04 08:33:17] 2025-04-04 12:33:00,381 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 08:33:17] 2025-04-04 12:33:00,381 | INFO     | **************************************
[2025-04-04 08:33:17] 2025-04-04 12:33:00,381 | INFO     | 
[2025-04-04 08:33:17] 2025-04-04 12:33:00,433 | INFO     | architecture information:
[2025-04-04 08:33:17] 2025-04-04 12:33:00,444 | INFO     | executing command: cat /etc/os-release
[2025-04-04 08:33:17] 2025-04-04 12:33:00,518 | INFO     | cat /etc/os-release:
[2025-04-04 08:33:17] NAME="CentOS Linux"
[2025-04-04 08:33:17] VERSION="7 (Core)"
[2025-04-04 08:33:17] ID="centos"
[2025-04-04 08:33:17] ID_LIKE="rhel fedora"
[2025-04-04 08:33:17] VERSION_ID="7"
[2025-04-04 08:33:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 08:33:17] ANSI_COLOR="0;31"
[2025-04-04 08:33:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 08:33:17] HOME_URL="https://www.centos.org/"
[2025-04-04 08:33:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 08:33:17] 
[2025-04-04 08:33:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 08:33:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 08:33:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 08:33:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 08:33:17] 
[2025-04-04 08:33:17] 2025-04-04 12:33:00,518 | INFO     | **************************************
[2025-04-04 08:33:17] 2025-04-04 12:33:01,022 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-04-04 08:33:17] 2025-04-04 12:33:01,091 | INFO     | sufficient remaining disk space (72789000192 B)
[2025-04-04 08:33:17] 2025-04-04 12:33:01,091 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 08:33:17] 2025-04-04 12:33:01,091 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 08:33:17] 2025-04-04 12:33:01,092 | INFO     | update_server=False
[2025-04-04 08:33:17] 2025-04-04 12:33:01,092 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 08:33:17] 2025-04-04 12:33:01,092 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-04 08:33:17] 2025-04-04 12:33:01,092 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 08:33:17] 2025-04-04 12:33:01,093 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 08:33:17] 2025-04-04 12:33:01,093 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 08:33:17] 2025-04-04 12:33:01,097 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 08:33:17] 2025-04-04 12:33:01,334 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 08:33:17] 2025-04-04 12:33:01,335 | INFO     | aborting loop
[2025-04-04 08:33:17] 2025-04-04 12:33:01,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 08:33:17] 2025-04-04 12:33:01,540 | INFO     | all job control threads have been joined
[2025-04-04 08:33:17] 2025-04-04 12:33:01,883 | INFO     | all data control threads have been joined
[2025-04-04 08:33:17] 2025-04-04 12:33:02,097 | INFO     | [job] retrieve thread has finished
[2025-04-04 08:33:17] 2025-04-04 12:33:02,180 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 08:33:17] 2025-04-04 12:33:02,341 | INFO     | [job] job monitor thread has finished
[2025-04-04 08:33:17] 2025-04-04 12:33:02,415 | INFO     | [job] queue monitor thread has finished
[2025-04-04 08:33:17] 2025-04-04 12:33:02,435 | INFO     | all payload control threads have been joined
[2025-04-04 08:33:17] 2025-04-04 12:33:02,547 | INFO     | [job] control thread has finished
[2025-04-04 08:33:17] 2025-04-04 12:33:02,578 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 08:33:17] 2025-04-04 12:33:02,692 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 08:33:17] 2025-04-04 12:33:02,782 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 08:33:17] 2025-04-04 12:33:02,888 | INFO     | [job] validate thread has finished
[2025-04-04 08:33:17] 2025-04-04 12:33:02,890 | INFO     | [data] control thread has finished
[2025-04-04 08:33:17] 2025-04-04 12:33:03,110 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 08:33:17] 2025-04-04 12:33:03,118 | INFO     | [data] copytool_out thread has finished
[2025-04-04 08:33:17] 2025-04-04 12:33:03,196 | INFO     | [data] copytool_in thread has finished
[2025-04-04 08:33:17] 2025-04-04 12:33:03,311 | INFO     | [payload] validate_post thread has finished
[2025-04-04 08:33:17] 2025-04-04 12:33:03,311 | INFO     | [payload] failed_post thread has finished
[2025-04-04 08:33:17] 2025-04-04 12:33:03,463 | INFO     | [payload] control thread has finished
[2025-04-04 08:33:17] 2025-04-04 12:33:06,190 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 08:33:17] 2025-04-04 12:33:07,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140107376797504)>', '<ExcThread(monitor, started 140107025721088)>']
[2025-04-04 08:33:17] 2025-04-04 12:33:08,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 08:33:17] 2025-04-04 12:33:08,161 | INFO     | [monitor] control thread has ended
[2025-04-04 08:33:17] 2025-04-04 12:33:12,543 | INFO     | all workflow threads have been joined
[2025-04-04 08:33:17] 2025-04-04 12:33:12,544 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 08:33:17] 2025-04-04 12:33:12,544 | INFO     | traces error code: 0
[2025-04-04 08:33:17] 2025-04-04 12:33:12,544 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 08:33:17] 2025-04-04 12:33:14,289 [wrapper] ==== pilot stdout END ====
[2025-04-04 08:33:17] 2025-04-04 12:33:14,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 08:33:17] 2025-04-04 12:33:14,363 [wrapper] pilotpid: 4047986
[2025-04-04 08:33:17] 2025-04-04 12:33:14,389 [wrapper] Pilot exit status: 0
[2025-04-04 08:33:17] 2025-04-04 12:33:14,664 [wrapper] pandaids: 6586324293
[2025-04-04 08:33:17] 2025-04-04 12:33:16,438 [wrapper] cleanup supervisor_pilot 2789104 4047987
[2025-04-04 08:33:17] 2025-04-04 12:33:16,454 [wrapper] Test setup, not cleaning
[2025-04-04 08:33:17] 2025-04-04 12:33:16,457 [wrapper] apfmon messages muted
[2025-04-04 08:33:17] 2025-04-04 12:33:16,483 [wrapper] ==== wrapper stdout END ====
[2025-04-04 08:33:17] 2025-04-04 12:33:16,495 [wrapper] ==== wrapper stderr END ====
[2025-04-04 08:33:17]  *** Error codes and diagnostics ***
[2025-04-04 08:33:17]     "exeErrorCode": 0,
[2025-04-04 08:33:17]     "exeErrorDiag": "",
[2025-04-04 08:33:17]     "pilotErrorCode": 0,
[2025-04-04 08:33:17]     "pilotErrorDiag": "",
[2025-04-04 08:33:17]  *** Listing of results directory ***
[2025-04-04 08:33:17] total 685980
[2025-04-04 08:33:17] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 17:05 queuedata.json
[2025-04-04 08:33:17] -rwx------. 1 boincer umatlas     37140 Apr  3 17:06 runpilot2-wrapper.sh
[2025-04-04 08:33:17] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 17:07 pilot3.tar.gz
[2025-04-04 08:33:17] -rw-r--r--. 1 boincer umatlas       100 Apr  3 21:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 08:33:17] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  3 21:24 run_atlas
[2025-04-04 08:33:17] -rw-r--r--. 1 boincer umatlas       105 Apr  3 21:24 job.xml
[2025-04-04 08:33:17] -rw-r--r--. 2 boincer umatlas 362153954 Apr  3 21:24 EVNT.43634896._000681.pool.root.1
[2025-04-04 08:33:17] -rw-r--r--. 2 boincer umatlas     17569 Apr  3 21:24 start_atlas.sh
[2025-04-04 08:33:17] drwxrwx--x. 2 boincer umatlas      4096 Apr  3 21:24 shared
[2025-04-04 08:33:17] -rw-r--r--. 2 boincer umatlas    508887 Apr  3 21:24 input.tar.gz
[2025-04-04 08:33:17] -rw-r--r--. 1 boincer umatlas         0 Apr  3 21:24 boinc_lockfile
[2025-04-04 08:33:17] -rw-r--r--. 1 boincer umatlas      2598 Apr  3 21:24 pandaJob.out
[2025-04-04 08:33:17] -rw-------. 1 boincer umatlas       467 Apr  3 21:24 setup.sh.local
[2025-04-04 08:33:17] -rw-------. 1 boincer umatlas    979994 Apr  3 21:25 agis_schedconf.cvmfs.json
[2025-04-04 08:33:17] drwx------. 4 boincer umatlas      4096 Apr  3 21:25 pilot3
[2025-04-04 08:33:17] -rw-r--r--. 1 boincer umatlas      6879 Apr  4 08:27 init_data.xml
[2025-04-04 08:33:17] -rw-------. 1 boincer umatlas 329848231 Apr  4 08:29 HITS.43634898._017756.pool.root.1
[2025-04-04 08:33:17] -rw-r--r--. 1 boincer umatlas       532 Apr  4 08:29 boinc_task_state.xml
[2025-04-04 08:33:17] -rw-------. 1 boincer umatlas      1045 Apr  4 08:32 memory_monitor_summary.json
[2025-04-04 08:33:17] -rw-------. 1 boincer umatlas   1603525 Apr  4 08:32 agis_ddmendpoints.agis.ALL.json
[2025-04-04 08:33:17] -rw-------. 1 boincer umatlas    577559 Apr  4 08:32 log.43634898._017756.job.log.tgz.1
[2025-04-04 08:33:17] -rw-------. 1 boincer umatlas        95 Apr  4 08:32 pilot_heartbeat.json
[2025-04-04 08:33:17] -rw-------. 1 boincer umatlas      7723 Apr  4 08:32 heartbeat.json
[2025-04-04 08:33:17] -rw-------. 1 boincer umatlas      4476 Apr  4 08:33 pilotlog.txt
[2025-04-04 08:33:17] -rw-r--r--. 1 boincer umatlas        28 Apr  4 08:33 wrapper_checkpoint.txt
[2025-04-04 08:33:17] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 08:33 boinc_mmap_file
[2025-04-04 08:33:17] -rw-------. 1 boincer umatlas   2722367 Apr  4 08:33 log.43634898._017756.job.log.1
[2025-04-04 08:33:17] -rw-------. 1 boincer umatlas       357 Apr  4 08:33 output.list
[2025-04-04 08:33:17] -rw-r--r--. 1 boincer umatlas       620 Apr  4 08:33 runtime_log
[2025-04-04 08:33:17] -rw-------. 1 boincer umatlas   3317760 Apr  4 08:33 result.tar.gz
[2025-04-04 08:33:17] -rw-r--r--. 1 boincer umatlas     11419 Apr  4 08:33 runtime_log.err
[2025-04-04 08:33:17] -rw-------. 1 boincer umatlas       659 Apr  4 08:33 IAcLDmHxgK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmw1HLDmYrT2km.diag
[2025-04-04 08:33:17] -rw-r--r--. 1 boincer umatlas     21304 Apr  4 08:33 stderr.txt
[2025-04-04 08:33:17] HITS file was successfully produced:
[2025-04-04 08:33:17] -rw-------. 1 boincer umatlas 329848231 Apr  4 08:29 shared/HITS.pool.root.1
[2025-04-04 08:33:17]  *** Contents of shared directory: ***
[2025-04-04 08:33:17] total 679556
[2025-04-04 08:33:17] -rw-r--r--. 2 boincer umatlas 362153954 Apr  3 21:24 ATLAS.root_0
[2025-04-04 08:33:17] -rw-r--r--. 2 boincer umatlas     17569 Apr  3 21:24 start_atlas.sh
[2025-04-04 08:33:17] -rw-r--r--. 2 boincer umatlas    508887 Apr  3 21:24 input.tar.gz
[2025-04-04 08:33:17] -rw-------. 1 boincer umatlas 329848231 Apr  4 08:29 HITS.pool.root.1
[2025-04-04 08:33:17] -rw-------. 1 boincer umatlas   3317760 Apr  4 08:33 result.tar.gz
08:33:18 (4034610): run_atlas exited; CPU time 88320.263784
08:33:18 (4034610): called boinc_finish(0)

</stderr_txt>
]]>

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