Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-03 18:45:50 (496): Detected: vboxwrapper 26206
2025-04-03 18:45:50 (496): Detected: BOINC client v8.0.2
2025-04-03 18:45:50 (496): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-03 18:45:50 (496): Successfully copied 'init_data.xml' to the shared directory.
2025-04-03 18:45:51 (496): Create VM. (boinc_a593ed77979d05f8, slot#3)
2025-04-03 18:45:51 (496): Setting Memory Size for VM. (4400MB)
2025-04-03 18:45:52 (496): Setting CPU Count for VM. (4)
2025-04-03 18:45:52 (496): Setting Chipset Options for VM.
2025-04-03 18:45:52 (496): Setting Graphics Controller Options for VM.
2025-04-03 18:45:52 (496): Setting Boot Options for VM.
2025-04-03 18:45:53 (496): Setting Network Configuration for NAT.
2025-04-03 18:45:53 (496): Enabling VM Network Access.
2025-04-03 18:45:53 (496): Disabling USB Support for VM.
2025-04-03 18:45:53 (496): Disabling COM Port Support for VM.
2025-04-03 18:45:54 (496): Disabling LPT Port Support for VM.
2025-04-03 18:45:54 (496): Disabling Audio Support for VM.
2025-04-03 18:45:54 (496): Disabling Clipboard Support for VM.
2025-04-03 18:45:55 (496): Disabling Drag and Drop Support for VM.
2025-04-03 18:45:55 (496): Adding storage controller(s) to VM.
2025-04-03 18:45:55 (496): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-03 18:45:56 (496): Adding VirtualBox Guest Additions to VM.
2025-04-03 18:45:56 (496): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-03 18:45:56 (496): forwarding host port 58950 to guest port 80
2025-04-03 18:45:56 (496): Enabling remote desktop for VM.
2025-04-03 18:45:57 (496): Required extension pack not installed, remote desktop not enabled.
2025-04-03 18:45:57 (496): Enabling shared directory for VM.
2025-04-03 18:45:57 (496): Starting VM using VBoxManage interface. (boinc_a593ed77979d05f8, slot#3)
2025-04-03 18:46:02 (496): Successfully started VM. (PID = '13580')
2025-04-03 18:46:02 (496): Reporting VM Process ID to BOINC.
2025-04-03 18:46:02 (496): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-03 18:46:02 (496): Guest Log: CPUID EDX: 0x178bfbff
2025-04-03 18:46:02 (496): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-03 18:46:02 (496): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-03 18:46:02 (496): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-03 18:46:02 (496): Detected: Web Application Enabled (http://localhost:58950)
2025-04-03 18:46:02 (496): Preference change detected
2025-04-03 18:46:02 (496): Setting CPU throttle for VM. (100%)
2025-04-03 18:46:02 (496): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-03 18:46:04 (496): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-03 18:46:04 (496): Guest Log: BIOS: Booting from Hard Disk...
2025-04-03 18:46:07 (496): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-03 18:46:07 (496): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-03 18:46:07 (496): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-03 18:46:12 (496): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-03 18:46:12 (496): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-03 18:46:16 (496): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-03 18:46:16 (496): Guest Log: 00:00:00.000121 main     Log opened 2025-04-03T18:46:14.633276000Z
2025-04-03 18:46:16 (496): Guest Log: 00:00:00.000214 main     OS Product: Linux
2025-04-03 18:46:16 (496): Guest Log: 00:00:00.000243 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-03 18:46:16 (496): Guest Log: 00:00:00.000268 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-03 18:46:16 (496): Guest Log: 00:00:00.000291 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-03 18:46:16 (496): Guest Log: 00:00:00.000292 main     Process ID: 1312
2025-04-03 18:46:16 (496): Guest Log: 00:00:00.000292 main     Package type: LINUX_64BITS_GENERIC
2025-04-03 18:46:16 (496): Guest Log: 00:00:00.001384 main     5.2.32 r132073 started. Verbose level = 0
2025-04-03 18:46:16 (496): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-03 18:46:16 (496): Guest Log: [INFO] Mounting shared directory
2025-04-03 18:46:16 (496): Guest Log: [INFO] Checking for init_data.xml
2025-04-03 18:46:26 (496): Guest Log: 00:00:10.004180 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 424 714 000ns (GuestNow=1 743 723 986 061 004 000 ns GuestLast=1 743 705 974 636 290 000 ns fSetTimeLastLoop=true )
2025-04-03 18:48:11 (496): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-03 18:48:11 (496): Guest Log: [INFO] Detected branch: prod
2025-04-03 18:48:12 (496): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-03 18:48:12 (496): Guest Log: Copying input files
2025-04-03 18:48:13 (496): Guest Log: Copied input files into RunAtlas.
2025-04-03 18:48:13 (496): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-03 18:48:13 (496): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-03 18:48:13 (496): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-03 18:48:13 (496): Guest Log: Further information can be found at the LHC@home message board.
2025-04-03 18:48:24 (496): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-03 18:48:25 (496): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-03 18:48:25 (496): Guest Log: 2.6.3.0 1632 2 32192 144469 4 1 3117321 4096000 0 65024 0 0 n/a 1 1 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-03 18:48:25 (496): Guest Log: copied the webapp to /var/www
2025-04-03 18:48:25 (496): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-03 18:48:25 (496): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-03 18:48:26 (496): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-03 18:48:26 (496): Guest Log:  *** Starting ATLAS job. (PandaID=6586320645 taskID=43634898) ***
2025-04-03 20:26:05 (496): Status Report: Elapsed Time: '6000.000000'
2025-04-03 20:26:05 (496): Status Report: CPU Time: '17050.375000'
2025-04-03 22:06:08 (496): Status Report: Elapsed Time: '12000.000000'
2025-04-03 22:06:08 (496): Status Report: CPU Time: '40263.875000'
2025-04-03 23:36:40 (496): Guest Log:  *** Job finished ***
2025-04-03 23:36:40 (496): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:21,844 | INFO     | [payload] validate_post thread has finished
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:22,277 | INFO     | [data] copytool_out thread has finished
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:25,846 | INFO     | [data] queue_monitor thread has finished
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:27,062 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140547921377088)>', '<ExcThread(monitor, started 140546798499584)>']
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:27,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:27,647 | INFO     | [monitor] control thread has ended
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:32,069 | INFO     | all workflow threads have been joined
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:32,069 | INFO     | end of generic workflow (traces error code: 0)
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:32,069 | INFO     | traces error code: 0
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:32,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:32,150 [wrapper] ==== pilot stdout END ====
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:32,154 [wrapper] ==== wrapper stdout RESUME ====
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:32,158 [wrapper] pilotpid: 6011
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:32,163 [wrapper] Pilot exit status: 0
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:32,289 [wrapper] pandaids: 6586320645
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:32,316 [wrapper] cleanup supervisor_pilot 17380 6012
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:32,320 [wrapper] Test setup, not cleaning
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:32,324 [wrapper] apfmon messages muted
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:32,328 [wrapper] ==== wrapper stdout END ====
2025-04-03 23:36:40 (496): Guest Log: 2025-04-04 04:36:32,331 [wrapper] ==== wrapper stderr END ====
2025-04-03 23:36:40 (496): Guest Log:  *** Error codes and diagnostics ***
2025-04-03 23:36:40 (496): Guest Log:     "exeErrorCode": 0,
2025-04-03 23:36:40 (496): Guest Log:     "exeErrorDiag": "",
2025-04-03 23:36:40 (496): Guest Log:     "pilotErrorCode": 0,
2025-04-03 23:36:40 (496): Guest Log:     "pilotErrorDiag": "",
2025-04-03 23:36:40 (496): Guest Log:  *** Listing of results directory ***
2025-04-03 23:36:40 (496): Guest Log: total 323748
2025-04-03 23:36:40 (496): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr  3 18:20 pilot3.tar.gz
2025-04-03 23:36:40 (496): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr  3 18:22 queuedata.json
2025-04-03 23:36:40 (496): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  3 18:22 runpilot2-wrapper.sh
2025-04-03 23:36:40 (496): Guest Log: -rwxr-xr-x. 1 atlas atlas      9184 Apr  3 23:48 init_data.xml
2025-04-03 23:36:40 (496): Guest Log: -rwxr-xr-x. 1 atlas atlas    508889 Apr  3 23:48 input.tar.gz
2025-04-03 23:36:40 (496): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr  3 23:48 start_atlas.sh
2025-04-03 23:36:40 (496): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  3 23:48 EVNT.43634896._000447.pool.root.1 -> /data/./ATLAS.root_0
2025-04-03 23:36:40 (496): Guest Log: -rw-r--r--. 1 atlas atlas      2599 Apr  3 23:48 pandaJob.out
2025-04-03 23:36:40 (496): Guest Log: -rw-------. 1 atlas atlas       424 Apr  3 23:49 setup.sh.local
2025-04-03 23:36:40 (496): Guest Log: -rw-------. 1 atlas atlas    980026 Apr  3 23:53 agis_schedconf.cvmfs.json
2025-04-03 23:36:40 (496): Guest Log: drwx------. 4 atlas atlas      4096 Apr  3 23:53 pilot3
2025-04-03 23:36:40 (496): Guest Log: -rw-------. 1 atlas atlas 324263120 Apr  4 04:34 HITS.43634898._016512.pool.root.1
2025-04-03 23:36:40 (496): Guest Log: -rw-------. 1 atlas atlas      1025 Apr  4 04:34 memory_monitor_summary.json
2025-04-03 23:36:40 (496): Guest Log: -rw-------. 1 atlas atlas   1603525 Apr  4 04:34 agis_ddmendpoints.agis.ALL.json
2025-04-03 23:36:40 (496): Guest Log: -rw-------. 1 atlas atlas    341438 Apr  4 04:34 log.43634898._016512.job.log.tgz.1
2025-04-03 23:36:40 (496): Guest Log: -rw-------. 1 atlas atlas        95 Apr  4 04:36 pilot_heartbeat.json
2025-04-03 23:36:40 (496): Guest Log: -rw-------. 1 atlas atlas      7676 Apr  4 04:36 heartbeat.json
2025-04-03 23:36:40 (496): Guest Log: -rw-------. 1 atlas atlas      4536 Apr  4 04:36 pilotlog.txt
2025-04-03 23:36:40 (496): Guest Log: -rw-------. 1 atlas atlas   1401812 Apr  4 04:36 log.43634898._016512.job.log.1
2025-04-03 23:36:40 (496): Guest Log: -rw-------. 1 atlas atlas       357 Apr  4 04:36 output.list
2025-04-03 23:36:40 (496): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  4 04:36 runtime_log
2025-04-03 23:36:40 (496): Guest Log: -rw-------. 1 atlas atlas   1761280 Apr  4 04:36 result.tar.gz
2025-04-03 23:36:40 (496): Guest Log: -rw-r--r--. 1 atlas atlas     10953 Apr  4 04:36 runtime_log.err
2025-04-03 23:36:40 (496): Guest Log: -rw-------. 1 atlas atlas       665 Apr  4 04:36 k2uMDmSOeK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmPnHLDmnkHDpn.diag
2025-04-03 23:36:40 (496): Guest Log: Looking for outputfile HITS.43634898._016512.pool.root.1
2025-04-03 23:36:40 (496): Guest Log: HITS file was successfully produced
2025-04-03 23:36:40 (496): Guest Log: -rw-------. 1 atlas atlas 324263120 Apr  4 04:34 /home/atlas/RunAtlas/HITS.43634898._016512.pool.root.1
2025-04-03 23:36:42 (496): Guest Log: Successfully finished the ATLAS job!
2025-04-03 23:36:42 (496): Guest Log: Copying the results back to the shared directory!
2025-04-03 23:36:42 (496): Guest Log:  *** Contents of shared directory: ***
2025-04-03 23:36:42 (496): Guest Log: total 671796
2025-04-03 23:36:42 (496): Guest Log: -rwxrwxrwx. 1 root root 361348082 Apr  3 23:45 ATLAS.root_0
2025-04-03 23:36:42 (496): Guest Log: -rwxrwxrwx. 1 root root 324263120 Apr  4  2025 HITS.pool.root.1
2025-04-03 23:36:42 (496): Guest Log: -rwxrwxrwx. 1 root root      9184 Apr  3 23:45 init_data.xml
2025-04-03 23:36:42 (496): Guest Log: -rwxrwxrwx. 1 root root    508889 Apr  3 22:55 input.tar.gz
2025-04-03 23:36:42 (496): Guest Log: -rwxrwxrwx. 1 root root   1761280 Apr  4  2025 result.tar.gz
2025-04-03 23:36:42 (496): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr  3 22:55 start_atlas.sh
2025-04-03 23:36:42 (496): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-03 23:36:42 (496): VM Completion File Detected.
2025-04-03 23:36:42 (496): Powering off VM.
2025-04-03 23:36:42 (496): Successfully stopped VM.
2025-04-03 23:36:42 (496): Deregistering VM. (boinc_a593ed77979d05f8, slot#3)
2025-04-03 23:36:42 (496): Removing network bandwidth throttle group from VM.
2025-04-03 23:36:43 (496): Removing VM from VirtualBox.
23:36:48 (496): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN