Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:14:40 (18445): wrapper (7.7.26015): starting
16:14:40 (18445): wrapper: running run_atlas (--nthreads 8)
[2025-04-03 16:14:40] Arguments: --nthreads 8
[2025-04-03 16:14:40] Threads: 8
[2025-04-03 16:14:40] Checking for CVMFS
[2025-04-03 16:14:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 16:14:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 16:14:41] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 16:14:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 16:14:45] 2.11.2.0 82244 2808 157960 144463 2 831 14939651 18432000 23018 130560 0 22801644 98.575 60368316 56549 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-03 16:14:45] CVMFS is ok
[2025-04-03 16:14:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-03 16:14:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-03 16:14:45] Further information can be found at the LHC@home message board.
[2025-04-03 16:14:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 16:14:45] Checking for apptainer binary...
[2025-04-03 16:14:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 16:14:45] Running /usr/bin/apptainer --version
[2025-04-03 16:14:47] apptainer version 1.3.2-1.el7
[2025-04-03 16:14:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 16:15:00] c-212-8.aglt2.org
[2025-04-03 16:15:00] apptainer works
[2025-04-03 16:15:00] Set ATHENA_PROC_NUMBER=8
[2025-04-03 16:15:00] Set ATHENA_CORE_NUMBER=8
[2025-04-03 16:15:00] Starting ATLAS job with PandaID=6585757509
[2025-04-03 16:15:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:00:10 (18445): BOINC client no longer exists - exiting
17:00:10 (18445): timer handler: client dead, exiting
17:13:03 (40878): wrapper (7.7.26015): starting
17:13:03 (40878): wrapper: running run_atlas (--nthreads 8)
[2025-04-03 17:13:03] Arguments: --nthreads 8
[2025-04-03 17:13:03] Threads: 8
[2025-04-03 17:13:03] This job has been restarted, cleaning up previous attempt
[2025-04-03 17:13:03] Checking for CVMFS
[2025-04-03 17:13:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 17:13:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 17:13:03] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 17:13:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 17:13:04] 2.11.2.0 82244 2866 146220 144464 0 702 17644981 18432001 17566 130560 0 23074641 98.545 61548992 56645 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-03 17:13:04] CVMFS is ok
[2025-04-03 17:13:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-03 17:13:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-03 17:13:04] Further information can be found at the LHC@home message board.
[2025-04-03 17:13:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 17:13:04] Checking for apptainer binary...
[2025-04-03 17:13:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 17:13:04] Running /usr/bin/apptainer --version
[2025-04-03 17:13:04] apptainer version 1.3.2-1.el7
[2025-04-03 17:13:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 17:13:06] c-212-8.aglt2.org
[2025-04-03 17:13:06] apptainer works
[2025-04-03 17:13:06] Set ATHENA_PROC_NUMBER=8
[2025-04-03 17:13:06] Set ATHENA_CORE_NUMBER=8
[2025-04-03 17:13:06] Starting ATLAS job with PandaID=6585757509
[2025-04-03 17:13:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 00:05:36]  *** The last 200 lines of the pilot log: ***
[2025-04-04 00:05:36] 2025-04-04 04:05:19,874 | INFO     | sum of deviations: 260110543975.0842
[2025-04-04 00:05:36] 2025-04-04 04:05:19,874 | INFO     | mean x: 1743727166.6584158
[2025-04-04 00:05:36] 2025-04-04 04:05:19,874 | INFO     | mean y: 2483348.7252475247
[2025-04-04 00:05:36] 2025-04-04 04:05:19,875 | INFO     | -- intersect: -22180727241.22116
[2025-04-04 00:05:36] 2025-04-04 04:05:19,875 | INFO     | intersect: -22180727241.22116
[2025-04-04 00:05:36] 2025-04-04 04:05:19,875 | INFO     | chi2: 7.694599425927578
[2025-04-04 00:05:36] 2025-04-04 04:05:19,883 | INFO     | sum of square deviations: 19696395139.734314
[2025-04-04 00:05:36] 2025-04-04 04:05:19,886 | INFO     | sum of deviations: 313736691164.9147
[2025-04-04 00:05:36] 2025-04-04 04:05:19,886 | INFO     | mean x: 1743727014.160401
[2025-04-04 00:05:36] 2025-04-04 04:05:19,886 | INFO     | mean y: 2494169.0325814537
[2025-04-04 00:05:36] 2025-04-04 04:05:19,893 | INFO     | -- intersect: -27772697171.129578
[2025-04-04 00:05:36] 2025-04-04 04:05:19,893 | INFO     | intersect: -27772697171.129578
[2025-04-04 00:05:36] 2025-04-04 04:05:19,893 | INFO     | chi2: 6.037007734616819
[2025-04-04 00:05:36] 2025-04-04 04:05:19,893 | INFO     | current chi2=6.037007734616819 (change=21.54227399707604 %)
[2025-04-04 00:05:36] 2025-04-04 04:05:19,893 | INFO     | right removable region: 398
[2025-04-04 00:05:36] 2025-04-04 04:05:19,894 | INFO     | sum of square deviations: 19696356099.73432
[2025-04-04 00:05:36] 2025-04-04 04:05:19,905 | INFO     | sum of deviations: 144271498408.01257
[2025-04-04 00:05:36] 2025-04-04 04:05:19,905 | INFO     | mean x: 1743727319.160401
[2025-04-04 00:05:36] 2025-04-04 04:05:19,905 | INFO     | mean y: 2506885.671679198
[2025-04-04 00:05:36] 2025-04-04 04:05:19,905 | INFO     | -- intersect: -12769914158.932161
[2025-04-04 00:05:36] 2025-04-04 04:05:19,905 | INFO     | intersect: -12769914158.932161
[2025-04-04 00:05:36] 2025-04-04 04:05:19,906 | INFO     | chi2: 4.610579760559656
[2025-04-04 00:05:36] 2025-04-04 04:05:19,906 | INFO     | current chi2=4.610579760559656 (change=40.080314707170686 %)
[2025-04-04 00:05:36] 2025-04-04 04:05:19,906 | INFO     | sum of square deviations: 18965094962.10397
[2025-04-04 00:05:36] 2025-04-04 04:05:19,917 | INFO     | sum of deviations: 51388069519.02803
[2025-04-04 00:05:36] 2025-04-04 04:05:19,918 | INFO     | mean x: 1743727471.6624365
[2025-04-04 00:05:36] 2025-04-04 04:05:19,918 | INFO     | mean y: 2526256.616751269
[2025-04-04 00:05:36] 2025-04-04 04:05:19,918 | INFO     | -- intersect: -4722300522.003679
[2025-04-04 00:05:36] 2025-04-04 04:05:19,918 | INFO     | intersect: -4722300522.003679
[2025-04-04 00:05:36] 2025-04-04 04:05:19,918 | INFO     | chi2: 2.749898310898814
[2025-04-04 00:05:36] 2025-04-04 04:05:19,918 | INFO     | current chi2=2.749898310898814 (change=40.35677824246082 %)
[2025-04-04 00:05:36] 2025-04-04 04:05:19,919 | INFO     | sum of square deviations: 18252159749.47047
[2025-04-04 00:05:36] 2025-04-04 04:05:19,930 | INFO     | sum of deviations: -9403434462.532127
[2025-04-04 00:05:36] 2025-04-04 04:05:19,931 | INFO     | mean x: 1743727624.1645243
[2025-04-04 00:05:36] 2025-04-04 04:05:19,931 | INFO     | mean y: 2539221.9614395886
[2025-04-04 00:05:36] 2025-04-04 04:05:19,931 | INFO     | -- intersect: 900900219.2025286
[2025-04-04 00:05:36] 2025-04-04 04:05:19,931 | INFO     | intersect: 900900219.2025286
[2025-04-04 00:05:36] 2025-04-04 04:05:19,931 | INFO     | chi2: 1.8171284637613572
[2025-04-04 00:05:36] 2025-04-04 04:05:19,931 | INFO     | current chi2=1.8171284637613572 (change=33.92015782694808 %)
[2025-04-04 00:05:36] 2025-04-04 04:05:19,932 | INFO     | sum of square deviations: 17557317899.333294
[2025-04-04 00:05:36] 2025-04-04 04:05:19,943 | INFO     | sum of deviations: -27279998060.33334
[2025-04-04 00:05:36] 2025-04-04 04:05:19,943 | INFO     | mean x: 1743727776.6666667
[2025-04-04 00:05:36] 2025-04-04 04:05:19,943 | INFO     | mean y: 2543134.1927083335
[2025-04-04 00:05:36] 2025-04-04 04:05:19,943 | INFO     | -- intersect: 2711891488.9902472
[2025-04-04 00:05:36] 2025-04-04 04:05:19,944 | INFO     | intersect: 2711891488.9902472
[2025-04-04 00:05:36] 2025-04-04 04:05:19,944 | INFO     | chi2: 1.7372232825416334
[2025-04-04 00:05:36] 2025-04-04 04:05:19,944 | INFO     | current chi2=1.7372232825416334 (change=4.397332539402547 %)
[2025-04-04 00:05:36] 2025-04-04 04:05:19,944 | INFO     | left removable region: 40
[2025-04-04 00:05:36] 2025-04-04 04:05:19,952 | INFO     | sum of square deviations: 14226991998.10346
[2025-04-04 00:05:36] 2025-04-04 04:05:19,955 | INFO     | sum of deviations: 12567656835.743017
[2025-04-04 00:05:36] 2025-04-04 04:05:19,956 | INFO     | mean x: 1743728203.6620111
[2025-04-04 00:05:36] 2025-04-04 04:05:19,956 | INFO     | mean y: 2558780.2458100556
[2025-04-04 00:05:36] 2025-04-04 04:05:19,956 | INFO     | -- intersect: -1537793367.3727524
[2025-04-04 00:05:36] 2025-04-04 04:05:19,956 | INFO     | intersect: -1537793367.3727524
[2025-04-04 00:05:36] 2025-04-04 04:05:19,956 | INFO     | chi2: 0.0009344254082574651
[2025-04-04 00:05:36] 2025-04-04 04:05:19,964 | INFO     | -- intersect: -1537793367.3727524
[2025-04-04 00:05:36] 2025-04-04 04:05:19,965 | INFO     | current memory leak: 0.88 B/s (using 358 data points, chi2=0.00)
[2025-04-04 00:05:36] 2025-04-04 04:05:19,965 | INFO     | ..............................
[2025-04-04 00:05:36] 2025-04-04 04:05:19,965 | INFO     | . Timing measurements:
[2025-04-04 00:05:36] 2025-04-04 04:05:19,965 | INFO     | . get job = 0 s
[2025-04-04 00:05:36] 2025-04-04 04:05:19,965 | INFO     | . initial setup = 1 s
[2025-04-04 00:05:36] 2025-04-04 04:05:19,966 | INFO     | . payload setup = 13 s
[2025-04-04 00:05:36] 2025-04-04 04:05:19,966 | INFO     | . stage-in = 0 s
[2025-04-04 00:05:36] 2025-04-04 04:05:19,966 | INFO     | . payload execution = 24600 s
[2025-04-04 00:05:36] 2025-04-04 04:05:19,966 | INFO     | . stage-out = 5 s
[2025-04-04 00:05:36] 2025-04-04 04:05:19,966 | INFO     | . log creation = 0 s
[2025-04-04 00:05:36] 2025-04-04 04:05:19,966 | INFO     | ..............................
[2025-04-04 00:05:36] 2025-04-04 04:05:20,671 | INFO     | 
[2025-04-04 00:05:36] 2025-04-04 04:05:20,671 | INFO     | job summary report
[2025-04-04 00:05:36] 2025-04-04 04:05:20,671 | INFO     | --------------------------------------------------
[2025-04-04 00:05:36] 2025-04-04 04:05:20,671 | INFO     | PanDA job id: 6585757509
[2025-04-04 00:05:36] 2025-04-04 04:05:20,671 | INFO     | task id: 43634882
[2025-04-04 00:05:36] 2025-04-04 04:05:20,671 | INFO     | errors: (none)
[2025-04-04 00:05:36] 2025-04-04 04:05:20,671 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 00:05:36] 2025-04-04 04:05:20,671 | INFO     | pilot state: finished 
[2025-04-04 00:05:36] 2025-04-04 04:05:20,671 | INFO     | transexitcode: 0
[2025-04-04 00:05:36] 2025-04-04 04:05:20,671 | INFO     | exeerrorcode: 0
[2025-04-04 00:05:36] 2025-04-04 04:05:20,671 | INFO     | exeerrordiag: 
[2025-04-04 00:05:36] 2025-04-04 04:05:20,671 | INFO     | exitcode: 0
[2025-04-04 00:05:36] 2025-04-04 04:05:20,672 | INFO     | exitmsg: OK
[2025-04-04 00:05:36] 2025-04-04 04:05:20,672 | INFO     | cpuconsumptiontime: 61704 s
[2025-04-04 00:05:36] 2025-04-04 04:05:20,672 | INFO     | nevents: 400
[2025-04-04 00:05:36] 2025-04-04 04:05:20,672 | INFO     | neventsw: 0
[2025-04-04 00:05:36] 2025-04-04 04:05:20,672 | INFO     | pid: 22085
[2025-04-04 00:05:36] 2025-04-04 04:05:20,672 | INFO     | pgrp: 22085
[2025-04-04 00:05:36] 2025-04-04 04:05:20,672 | INFO     | corecount: 8
[2025-04-04 00:05:36] 2025-04-04 04:05:20,672 | INFO     | event service: False
[2025-04-04 00:05:36] 2025-04-04 04:05:20,672 | INFO     | sizes: {0: 2416538, 1: 2417394, 12: 2417628, 23: 2417628, 24618: 2452828, 24625: 2461953, 24672: 2462067}
[2025-04-04 00:05:36] 2025-04-04 04:05:20,672 | INFO     | --------------------------------------------------
[2025-04-04 00:05:36] 2025-04-04 04:05:20,672 | INFO     | 
[2025-04-04 00:05:36] 2025-04-04 04:05:20,672 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-04 00:05:36] 2025-04-04 04:05:20,912 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,912 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,912 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,912 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,912 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,912 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,912 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,912 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,912 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,912 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,912 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,913 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,913 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,913 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,913 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,913 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,913 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,913 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 00:05:36] 2025-04-04 04:05:20,913 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,913 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 00:05:36] 2025-04-04 04:05:20,913 | INFO     | job 6585757509 has completed (purged errors)
[2025-04-04 00:05:36] 2025-04-04 04:05:20,913 | INFO     | overall cleanup function is called
[2025-04-04 00:05:36] 2025-04-04 04:05:21,932 | INFO     | --- collectZombieJob: --- 10, [22085]
[2025-04-04 00:05:36] 2025-04-04 04:05:21,933 | INFO     | zombie collector waiting for pid 22085
[2025-04-04 00:05:36] 2025-04-04 04:05:21,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 00:05:36] 2025-04-04 04:05:21,933 | INFO     | collected zombie processes
[2025-04-04 00:05:36] 2025-04-04 04:05:21,933 | INFO     | will attempt to kill all subprocesses of pid=22085
[2025-04-04 00:05:36] 2025-04-04 04:05:22,609 | INFO     | process IDs to be killed: [22085] (in reverse order)
[2025-04-04 00:05:36] 2025-04-04 04:05:23,102 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 00:05:36] 2025-04-04 04:05:23,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 00:05:36] 2025-04-04 04:05:23,115 | INFO     | did not find any defunct processes belonging to 22085
[2025-04-04 00:05:36] 2025-04-04 04:05:23,125 | INFO     | did not find any defunct processes belonging to 22085
[2025-04-04 00:05:36] 2025-04-04 04:05:23,126 | INFO     | ready for new job
[2025-04-04 00:05:36] 2025-04-04 04:05:23,126 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 00:05:36] 2025-04-04 04:05:23,128 | INFO     | **************************************
[2025-04-04 00:05:36] 2025-04-04 04:05:23,128 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 00:05:36] 2025-04-04 04:05:23,128 | INFO     | **************************************
[2025-04-04 00:05:36] 2025-04-04 04:05:23,128 | INFO     | 
[2025-04-04 00:05:36] 2025-04-04 04:05:23,132 | INFO     | architecture information:
[2025-04-04 00:05:36] 2025-04-04 04:05:23,133 | INFO     | executing command: cat /etc/os-release
[2025-04-04 00:05:36] 2025-04-04 04:05:23,248 | INFO     | cat /etc/os-release:
[2025-04-04 00:05:36] NAME="CentOS Linux"
[2025-04-04 00:05:36] VERSION="7 (Core)"
[2025-04-04 00:05:36] ID="centos"
[2025-04-04 00:05:36] ID_LIKE="rhel fedora"
[2025-04-04 00:05:36] VERSION_ID="7"
[2025-04-04 00:05:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 00:05:36] ANSI_COLOR="0;31"
[2025-04-04 00:05:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 00:05:36] HOME_URL="https://www.centos.org/"
[2025-04-04 00:05:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 00:05:36] 
[2025-04-04 00:05:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 00:05:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 00:05:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 00:05:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 00:05:36] 
[2025-04-04 00:05:36] 2025-04-04 04:05:23,248 | INFO     | **************************************
[2025-04-04 00:05:36] 2025-04-04 04:05:23,752 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-04 00:05:36] 2025-04-04 04:05:23,775 | INFO     | sufficient remaining disk space (101825118208 B)
[2025-04-04 00:05:36] 2025-04-04 04:05:23,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 00:05:36] 2025-04-04 04:05:23,776 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 00:05:36] 2025-04-04 04:05:23,776 | INFO     | update_server=False
[2025-04-04 00:05:36] 2025-04-04 04:05:23,776 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 00:05:36] 2025-04-04 04:05:23,776 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 00:05:36] 2025-04-04 04:05:23,776 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 00:05:36] 2025-04-04 04:05:23,777 | INFO     | aborting loop
[2025-04-04 00:05:36] 2025-04-04 04:05:23,777 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 00:05:36] 2025-04-04 04:05:23,778 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-04 00:05:36] 2025-04-04 04:05:23,778 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 00:05:36] 2025-04-04 04:05:23,778 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 00:05:36] 2025-04-04 04:05:23,778 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 00:05:36] 2025-04-04 04:05:24,782 | INFO     | [job] retrieve thread has finished
[2025-04-04 00:05:36] 2025-04-04 04:05:24,783 | INFO     | [job] job monitor thread has finished
[2025-04-04 00:05:36] 2025-04-04 04:05:24,815 | INFO     | all job control threads have been joined
[2025-04-04 00:05:36] 2025-04-04 04:05:24,874 | INFO     | all data control threads have been joined
[2025-04-04 00:05:36] 2025-04-04 04:05:25,021 | INFO     | all payload control threads have been joined
[2025-04-04 00:05:36] 2025-04-04 04:05:25,144 | INFO     | [job] validate thread has finished
[2025-04-04 00:05:36] 2025-04-04 04:05:25,148 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 00:05:36] 2025-04-04 04:05:25,254 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 00:05:36] 2025-04-04 04:05:25,450 | INFO     | [payload] validate_post thread has finished
[2025-04-04 00:05:36] 2025-04-04 04:05:25,558 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 00:05:36] 2025-04-04 04:05:25,559 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 00:05:36] 2025-04-04 04:05:25,559 | INFO     | [data] copytool_in thread has finished
[2025-04-04 00:05:36] 2025-04-04 04:05:25,559 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 00:05:36] 2025-04-04 04:05:25,785 | INFO     | [data] copytool_out thread has finished
[2025-04-04 00:05:36] 2025-04-04 04:05:25,822 | INFO     | [job] control thread has finished
[2025-04-04 00:05:36] 2025-04-04 04:05:25,880 | INFO     | [data] control thread has finished
[2025-04-04 00:05:36] 2025-04-04 04:05:26,026 | INFO     | [payload] control thread has finished
[2025-04-04 00:05:36] 2025-04-04 04:05:26,104 | INFO     | [payload] failed_post thread has finished
[2025-04-04 00:05:36] 2025-04-04 04:05:26,260 | INFO     | [job] queue monitor thread has finished
[2025-04-04 00:05:36] 2025-04-04 04:05:27,786 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 00:05:36] 2025-04-04 04:05:29,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139801782978368)>', '<ExcThread(monitor, started 139800891868928)>']
[2025-04-04 00:05:36] 2025-04-04 04:05:29,819 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 00:05:36] 2025-04-04 04:05:29,820 | INFO     | [monitor] control thread has ended
[2025-04-04 00:05:36] 2025-04-04 04:05:34,361 | INFO     | all workflow threads have been joined
[2025-04-04 00:05:36] 2025-04-04 04:05:34,362 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 00:05:36] 2025-04-04 04:05:34,362 | INFO     | traces error code: 0
[2025-04-04 00:05:36] 2025-04-04 04:05:34,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 00:05:36] 2025-04-04 04:05:34,739 [wrapper] ==== pilot stdout END ====
[2025-04-04 00:05:36] 2025-04-04 04:05:34,779 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 00:05:36] 2025-04-04 04:05:34,816 [wrapper] pilotpid: 75766
[2025-04-04 00:05:36] 2025-04-04 04:05:34,844 [wrapper] Pilot exit status: 0
[2025-04-04 00:05:36] 2025-04-04 04:05:35,080 [wrapper] pandaids: 6585757509 6585757509
[2025-04-04 00:05:36] 2025-04-04 04:05:35,549 [wrapper] cleanup supervisor_pilot 81066 75767
[2025-04-04 00:05:36] 2025-04-04 04:05:35,730 [wrapper] Test setup, not cleaning
[2025-04-04 00:05:36] 2025-04-04 04:05:35,773 [wrapper] apfmon messages muted
[2025-04-04 00:05:36] 2025-04-04 04:05:35,776 [wrapper] ==== wrapper stdout END ====
[2025-04-04 00:05:36] 2025-04-04 04:05:35,791 [wrapper] ==== wrapper stderr END ====
[2025-04-04 00:05:36]  *** Error codes and diagnostics ***
[2025-04-04 00:05:37]     "exeErrorCode": 0,
[2025-04-04 00:05:37]     "exeErrorDiag": "",
[2025-04-04 00:05:37]     "pilotErrorCode": 0,
[2025-04-04 00:05:37]     "pilotErrorDiag": "",
[2025-04-04 00:05:37]  *** Listing of results directory ***
[2025-04-04 00:05:37] total 968644
[2025-04-04 00:05:37] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-04 00:05:37] -rw-r--r-- 1 boincer umatlas    495897 Apr  3 12:30 pilot3.tar.gz
[2025-04-04 00:05:37] -rwx------ 1 boincer umatlas     37140 Apr  3 12:33 runpilot2-wrapper.sh
[2025-04-04 00:05:37] -rw-r--r-- 1 boincer umatlas      5111 Apr  3 12:33 queuedata.json
[2025-04-04 00:05:37] -rw-r--r-- 1 boincer umatlas       100 Apr  3 16:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 00:05:37] -rwxr-xr-x 1 boincer umatlas      7986 Apr  3 16:14 run_atlas
[2025-04-04 00:05:37] -rw-r--r-- 1 boincer umatlas       105 Apr  3 16:14 job.xml
[2025-04-04 00:05:37] -rw-r--r-- 3 boincer umatlas 342223511 Apr  3 16:14 EVNT.43634880._000866.pool.root.1
[2025-04-04 00:05:37] -rw-r--r-- 3 boincer umatlas 342223511 Apr  3 16:14 ATLAS.root_0
[2025-04-04 00:05:37] -rw-r--r-- 2 boincer umatlas     17569 Apr  3 16:14 start_atlas.sh
[2025-04-04 00:05:37] drwxrwx--x 2 boincer umatlas      4096 Apr  3 16:14 shared
[2025-04-04 00:05:37] -rw-r--r-- 2 boincer umatlas    508908 Apr  3 16:14 input.tar.gz
[2025-04-04 00:05:37] -rw-r--r-- 1 boincer umatlas         0 Apr  3 16:14 boinc_lockfile
[2025-04-04 00:05:37] -rw-r--r-- 1 boincer umatlas      2618 Apr  3 17:13 pandaJob.out
[2025-04-04 00:05:37] -rw------- 1 boincer umatlas       424 Apr  3 17:13 setup.sh.local
[2025-04-04 00:05:37] -rw------- 1 boincer umatlas    979976 Apr  3 17:13 agis_schedconf.cvmfs.json
[2025-04-04 00:05:37] -rw------- 1 boincer umatlas 298447300 Apr  4 00:03 HITS.43634882._013323.pool.root.1
[2025-04-04 00:05:37] -rw-r--r-- 1 boincer umatlas       532 Apr  4 00:03 boinc_task_state.xml
[2025-04-04 00:05:37] -rw-r--r-- 1 boincer umatlas      6303 Apr  4 00:03 init_data.xml
[2025-04-04 00:05:37] -rw------- 1 boincer umatlas      1087 Apr  4 00:04 memory_monitor_summary.json
[2025-04-04 00:05:37] -rw------- 1 boincer umatlas   1603525 Apr  4 00:04 agis_ddmendpoints.agis.ALL.json
[2025-04-04 00:05:37] -rw------- 1 boincer umatlas    489937 Apr  4 00:04 log.43634882._013323.job.log.tgz.1
[2025-04-04 00:05:37] -rw------- 1 boincer umatlas      7761 Apr  4 00:05 heartbeat.json
[2025-04-04 00:05:37] -rw------- 1 boincer umatlas        96 Apr  4 00:05 pilot_heartbeat.json
[2025-04-04 00:05:37] -rw------- 1 boincer umatlas      4477 Apr  4 00:05 pilotlog.txt
[2025-04-04 00:05:37] -rw------- 1 boincer umatlas   2087560 Apr  4 00:05 log.43634882._013323.job.log.1
[2025-04-04 00:05:37] -rw-r--r-- 1 boincer umatlas      8192 Apr  4 00:05 boinc_mmap_file
[2025-04-04 00:05:37] -rw------- 1 boincer umatlas       357 Apr  4 00:05 output.list
[2025-04-04 00:05:37] -rw-r--r-- 1 boincer umatlas       620 Apr  4 00:05 runtime_log
[2025-04-04 00:05:37] -rw------- 1 boincer umatlas   2600960 Apr  4 00:05 result.tar.gz
[2025-04-04 00:05:37] -rw------- 1 boincer umatlas       788 Apr  4 00:05 v27MDmegcK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmYcHLDmjBzH8n.diag
[2025-04-04 00:05:37] -rw-r--r-- 1 boincer umatlas     11094 Apr  4 00:05 runtime_log.err
[2025-04-04 00:05:37] -rw-r--r-- 1 boincer umatlas        28 Apr  4 00:05 wrapper_checkpoint.txt
[2025-04-04 00:05:37] -rw-r--r-- 1 boincer umatlas     23075 Apr  4 00:05 stderr.txt
[2025-04-04 00:05:37] HITS file was successfully produced:
[2025-04-04 00:05:37] -rw------- 1 boincer umatlas 298447300 Apr  4 00:03 shared/HITS.pool.root.1
[2025-04-04 00:05:37]  *** Contents of shared directory: ***
[2025-04-04 00:05:37] total 628724
[2025-04-04 00:05:37] -rw-r--r-- 3 boincer umatlas 342223511 Apr  3 16:14 ATLAS.root_0
[2025-04-04 00:05:37] -rw-r--r-- 2 boincer umatlas     17569 Apr  3 16:14 start_atlas.sh
[2025-04-04 00:05:37] -rw-r--r-- 2 boincer umatlas    508908 Apr  3 16:14 input.tar.gz
[2025-04-04 00:05:37] -rw------- 1 boincer umatlas 298447300 Apr  4 00:03 HITS.pool.root.1
[2025-04-04 00:05:37] -rw------- 1 boincer umatlas   2600960 Apr  4 00:05 result.tar.gz
00:05:38 (40878): run_atlas exited; CPU time 61151.972754
00:05:38 (40878): called boinc_finish(0)

</stderr_txt>
]]>

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