Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-04 16:16:58 (4628): Detected: vboxwrapper 26206
2025-04-04 16:16:58 (4628): Detected: BOINC client v7.16.5
2025-04-04 16:16:58 (4628): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2025-04-04 16:16:59 (4628): Successfully copied 'init_data.xml' to the shared directory.
2025-04-04 16:16:59 (4628): Create VM. (boinc_7e89881577547c48, slot#3)
2025-04-04 16:17:00 (4628): Setting Memory Size for VM. (4400MB)
2025-04-04 16:17:00 (4628): Setting CPU Count for VM. (4)
2025-04-04 16:17:00 (4628): Setting Chipset Options for VM.
2025-04-04 16:17:00 (4628): Setting Graphics Controller Options for VM.
2025-04-04 16:17:01 (4628): Setting Boot Options for VM.
2025-04-04 16:17:01 (4628): Setting Network Configuration for NAT.
2025-04-04 16:17:01 (4628): Enabling VM Network Access.
2025-04-04 16:17:01 (4628): Disabling USB Support for VM.
2025-04-04 16:17:02 (4628): Disabling COM Port Support for VM.
2025-04-04 16:17:02 (4628): Disabling LPT Port Support for VM.
2025-04-04 16:17:02 (4628): Disabling Audio Support for VM.
2025-04-04 16:17:02 (4628): Disabling Clipboard Support for VM.
2025-04-04 16:17:03 (4628): Disabling Drag and Drop Support for VM.
2025-04-04 16:17:03 (4628): Adding storage controller(s) to VM.
2025-04-04 16:17:03 (4628): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-04 16:17:04 (4628): Adding VirtualBox Guest Additions to VM.
2025-04-04 16:17:04 (4628): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-04 16:17:04 (4628): forwarding host port 56982 to guest port 80
2025-04-04 16:17:04 (4628): Enabling remote desktop for VM.
2025-04-04 16:17:05 (4628): Enabling shared directory for VM.
2025-04-04 16:17:05 (4628): Starting VM using VBoxManage interface. (boinc_7e89881577547c48, slot#3)
2025-04-04 16:17:09 (4628): Successfully started VM. (PID = '7628')
2025-04-04 16:17:09 (4628): Reporting VM Process ID to BOINC.
2025-04-04 16:17:09 (4628): Guest Log: BIOS: VirtualBox 5.2.44
2025-04-04 16:17:09 (4628): Guest Log: CPUID EDX: 0x178bfbff
2025-04-04 16:17:09 (4628): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-04 16:17:09 (4628): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-04 16:17:09 (4628): Detected: Web Application Enabled (http://localhost:56982)
2025-04-04 16:17:09 (4628): Detected: Remote Desktop Enabled (localhost:56983)
2025-04-04 16:17:09 (4628): Preference change detected
2025-04-04 16:17:09 (4628): Setting CPU throttle for VM. (100%)
2025-04-04 16:17:10 (4628): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-04 16:17:11 (4628): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-04 16:17:11 (4628): Guest Log: BIOS: Booting from Hard Disk...
2025-04-04 16:17:14 (4628): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-04 16:17:14 (4628): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-04 16:17:14 (4628): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-04 16:17:21 (4628): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-04 16:17:21 (4628): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-04 16:17:26 (4628): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-04 16:17:26 (4628): Guest Log: 00:00:00.000150 main     Log opened 2025-04-04T16:17:25.063673000Z
2025-04-04 16:17:26 (4628): Guest Log: 00:00:00.000233 main     OS Product: Linux
2025-04-04 16:17:26 (4628): Guest Log: 00:00:00.000263 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-04 16:17:26 (4628): Guest Log: 00:00:00.000285 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-04 16:17:26 (4628): Guest Log: 00:00:00.000306 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-04 16:17:26 (4628): Guest Log: 00:00:00.000306 main     Process ID: 1301
2025-04-04 16:17:26 (4628): Guest Log: 00:00:00.000307 main     Package type: LINUX_64BITS_GENERIC
2025-04-04 16:17:26 (4628): Guest Log: 00:00:00.001239 main     5.2.32 r132073 started. Verbose level = 0
2025-04-04 16:17:26 (4628): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-04 16:17:26 (4628): Guest Log: [INFO] Mounting shared directory
2025-04-04 16:17:26 (4628): Guest Log: [INFO] Checking for init_data.xml
2025-04-04 16:17:29 (4628): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-04 16:17:29 (4628): Guest Log: [INFO] Detected branch: prod
2025-04-04 16:17:30 (4628): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-04 16:17:30 (4628): Guest Log: Copying input files
2025-04-04 16:17:32 (4628): Guest Log: Copied input files into RunAtlas.
2025-04-04 16:17:32 (4628): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-04 16:17:32 (4628): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-04 16:17:32 (4628): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-04 16:17:32 (4628): Guest Log: Further information can be found at the LHC@home message board.
2025-04-04 16:17:36 (4628): Guest Log: 00:00:10.003942 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 297 186 000ns (GuestNow=1 743 772 656 769 622 000 ns GuestLast=1 743 783 445 066 808 000 ns fSetTimeLastLoop=true )
2025-04-04 16:17:41 (4628): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-04 16:17:42 (4628): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-04 16:17:42 (4628): Guest Log: 2.6.3.0 1578 0 32208 144490 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-04 16:17:42 (4628): Guest Log: copied the webapp to /var/www
2025-04-04 16:17:42 (4628): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-04 16:17:42 (4628): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-04 16:17:43 (4628): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-04 16:17:43 (4628): Guest Log:  *** Starting ATLAS job. (PandaID=6585690236 taskID=43996095) ***
2025-04-04 17:57:13 (4628): Status Report: Elapsed Time: '6000.000000'
2025-04-04 17:57:13 (4628): Status Report: CPU Time: '19645.171875'
2025-04-04 19:37:16 (4628): Status Report: Elapsed Time: '12000.000000'
2025-04-04 19:37:16 (4628): Status Report: CPU Time: '43162.796875'
2025-04-04 20:44:03 (4628): Guest Log:  *** Job finished ***
2025-04-04 20:44:03 (4628): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:43:53,685 | INFO     | [data] copytool_out thread has finished
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:43:54,412 | INFO     | [job] control thread has finished
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:43:56,028 | INFO     | [data] queue_monitor thread has finished
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:43:56,874 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140169710851904)>', '<ExcThread(monitor, started 140169109812992)>']
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:43:57,695 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:43:57,695 | INFO     | [monitor] control thread has ended
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:44:01,880 | INFO     | all workflow threads have been joined
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:44:01,880 | INFO     | end of generic workflow (traces error code: 0)
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:44:01,881 | INFO     | traces error code: 0
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:44:01,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:44:01,979 [wrapper] ==== pilot stdout END ====
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:44:01,984 [wrapper] ==== wrapper stdout RESUME ====
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:44:01,989 [wrapper] pilotpid: 5903
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:44:01,994 [wrapper] Pilot exit status: 0
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:44:02,107 [wrapper] pandaids: 6585690236
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:44:02,145 [wrapper] cleanup supervisor_pilot 14549 5904
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:44:02,154 [wrapper] Test setup, not cleaning
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:44:02,158 [wrapper] apfmon messages muted
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:44:02,164 [wrapper] ==== wrapper stdout END ====
2025-04-04 20:44:03 (4628): Guest Log: 2025-04-04 17:44:02,169 [wrapper] ==== wrapper stderr END ====
2025-04-04 20:44:03 (4628): Guest Log:  *** Error codes and diagnostics ***
2025-04-04 20:44:03 (4628): Guest Log:     "exeErrorCode": 0,
2025-04-04 20:44:03 (4628): Guest Log:     "exeErrorDiag": "",
2025-04-04 20:44:03 (4628): Guest Log:     "pilotErrorCode": 0,
2025-04-04 20:44:03 (4628): Guest Log:     "pilotErrorDiag": "",
2025-04-04 20:44:03 (4628): Guest Log:  *** Listing of results directory ***
2025-04-04 20:44:03 (4628): Guest Log: total 218216
2025-04-04 20:44:03 (4628): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr  3 15:58 pilot3.tar.gz
2025-04-04 20:44:03 (4628): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  3 16:29 runpilot2-wrapper.sh
2025-04-04 20:44:03 (4628): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr  3 16:29 queuedata.json
2025-04-04 20:44:03 (4628): Guest Log: -rwxr-xr-x. 1 atlas atlas      8857 Apr  4 13:17 init_data.xml
2025-04-04 20:44:03 (4628): Guest Log: -rwxr-xr-x. 1 atlas atlas    508881 Apr  4 13:17 input.tar.gz
2025-04-04 20:44:03 (4628): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr  4 13:17 start_atlas.sh
2025-04-04 20:44:03 (4628): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  4 13:17 EVNT.43880722._000003.pool.root.1 -> /data/./ATLAS.root_0
2025-04-04 20:44:03 (4628): Guest Log: -rw-r--r--. 1 atlas atlas      2582 Apr  4 13:17 pandaJob.out
2025-04-04 20:44:03 (4628): Guest Log: -rw-------. 1 atlas atlas       424 Apr  4 13:17 setup.sh.local
2025-04-04 20:44:03 (4628): Guest Log: -rw-------. 1 atlas atlas    979639 Apr  4 13:18 agis_schedconf.cvmfs.json
2025-04-04 20:44:03 (4628): Guest Log: drwx------. 4 atlas atlas      4096 Apr  4 13:18 pilot3
2025-04-04 20:44:03 (4628): Guest Log: -rw-------. 1 atlas atlas 216238367 Apr  4 17:43 HITS.43996095._000057.pool.root.1
2025-04-04 20:44:03 (4628): Guest Log: -rw-------. 1 atlas atlas        95 Apr  4 17:43 pilot_heartbeat.json
2025-04-04 20:44:03 (4628): Guest Log: -rw-------. 1 atlas atlas      1033 Apr  4 17:43 memory_monitor_summary.json
2025-04-04 20:44:03 (4628): Guest Log: -rw-------. 1 atlas atlas   1603525 Apr  4 17:43 agis_ddmendpoints.agis.ALL.json
2025-04-04 20:44:03 (4628): Guest Log: -rw-------. 1 atlas atlas    382104 Apr  4 17:43 log.43996095._000057.job.log.tgz.1
2025-04-04 20:44:03 (4628): Guest Log: -rw-------. 1 atlas atlas      7714 Apr  4 17:43 heartbeat.json
2025-04-04 20:44:03 (4628): Guest Log: -rw-------. 1 atlas atlas      4536 Apr  4 17:44 pilotlog.txt
2025-04-04 20:44:03 (4628): Guest Log: -rw-------. 1 atlas atlas   1341243 Apr  4 17:44 log.43996095._000057.job.log.1
2025-04-04 20:44:03 (4628): Guest Log: -rw-------. 1 atlas atlas       357 Apr  4 17:44 output.list
2025-04-04 20:44:03 (4628): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  4 17:44 runtime_log
2025-04-04 20:44:03 (4628): Guest Log: -rw-------. 1 atlas atlas   1740800 Apr  4 17:44 result.tar.gz
2025-04-04 20:44:03 (4628): Guest Log: -rw-r--r--. 1 atlas atlas     10981 Apr  4 17:44 runtime_log.err
2025-04-04 20:44:03 (4628): Guest Log: -rw-------. 1 atlas atlas       671 Apr  4 17:44 FpwNDmZccK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm6bHLDmejdUIm.diag
2025-04-04 20:44:03 (4628): Guest Log: Looking for outputfile HITS.43996095._000057.pool.root.1
2025-04-04 20:44:03 (4628): Guest Log: HITS file was successfully produced
2025-04-04 20:44:03 (4628): Guest Log: -rw-------. 1 atlas atlas 216238367 Apr  4 17:43 /home/atlas/RunAtlas/HITS.43996095._000057.pool.root.1
2025-04-04 20:44:05 (4628): Guest Log: Successfully finished the ATLAS job!
2025-04-04 20:44:05 (4628): Guest Log: Copying the results back to the shared directory!
2025-04-04 20:44:05 (4628): Guest Log:  *** Contents of shared directory: ***
2025-04-04 20:44:05 (4628): Guest Log: total 534812
2025-04-04 20:44:05 (4628): Guest Log: -rwxrwxrwx. 1 root root 329117897 Apr  4 13:16 ATLAS.root_0
2025-04-04 20:44:05 (4628): Guest Log: -rwxrwxrwx. 1 root root 216238367 Apr  4 17:44 HITS.pool.root.1
2025-04-04 20:44:05 (4628): Guest Log: -rwxrwxrwx. 1 root root      8857 Apr  4 13:16 init_data.xml
2025-04-04 20:44:05 (4628): Guest Log: -rwxrwxrwx. 1 root root    508881 Apr  3 20:36 input.tar.gz
2025-04-04 20:44:05 (4628): Guest Log: -rwxrwxrwx. 1 root root   1740800 Apr  4 17:44 result.tar.gz
2025-04-04 20:44:05 (4628): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr  3 20:36 start_atlas.sh
2025-04-04 20:44:05 (4628): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-04 20:44:05 (4628): VM Completion File Detected.
2025-04-04 20:44:05 (4628): Powering off VM.
2025-04-04 20:44:05 (4628): Successfully stopped VM.
2025-04-04 20:44:05 (4628): Deregistering VM. (boinc_7e89881577547c48, slot#3)
2025-04-04 20:44:05 (4628): Removing network bandwidth throttle group from VM.
2025-04-04 20:44:06 (4628): Removing VM from VirtualBox.
20:44:11 (4628): called boinc_finish(0)

</stderr_txt>
]]>

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