Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:12:20 (56013): wrapper (7.7.26015): starting
16:12:20 (56013): wrapper: running run_atlas (--nthreads 8)
[2025-04-03 16:12:20] Arguments: --nthreads 8
[2025-04-03 16:12:20] Threads: 8
[2025-04-03 16:12:20] Checking for CVMFS
[2025-04-03 16:12:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 16:12:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 16:12:21] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 16:12:22] /usr/bin/cvmfs_config: line 944: cd: /cvmfs/ligo.storage.igwn.org: Permission denied
[2025-04-03 16:12:22] 
[2025-04-03 16:12:22] CVMFS is ok
[2025-04-03 16:12:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-03 16:12:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-03 16:12:22] Further information can be found at the LHC@home message board.
[2025-04-03 16:12:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 16:12:22] Checking for apptainer binary...
[2025-04-03 16:12:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 16:12:22] Running /usr/bin/apptainer --version
[2025-04-03 16:12:22] apptainer version 1.3.2-1.el7
[2025-04-03 16:12:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 16:12:33] c-212-17.aglt2.org
[2025-04-03 16:12:33] apptainer works
[2025-04-03 16:12:33] Set ATHENA_PROC_NUMBER=8
[2025-04-03 16:12:33] Set ATHENA_CORE_NUMBER=8
[2025-04-03 16:12:33] Starting ATLAS job with PandaID=6585556085
[2025-04-03 16:12:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 00:07:21]  *** The last 200 lines of the pilot log: ***
[2025-04-04 00:07:21] 2025-04-04 04:06:58,562 | INFO     | -- intersect: -15547482926.245178
[2025-04-04 00:07:21] 2025-04-04 04:06:58,562 | INFO     | intersect: -15547482926.245178
[2025-04-04 00:07:21] 2025-04-04 04:06:58,562 | INFO     | chi2: 8.011267052643143
[2025-04-04 00:07:21] 2025-04-04 04:06:58,563 | INFO     | sum of square deviations: 29401478443.155617
[2025-04-04 00:07:21] 2025-04-04 04:06:58,567 | INFO     | sum of deviations: 331784065948.58795
[2025-04-04 00:07:21] 2025-04-04 04:06:58,567 | INFO     | mean x: 1743725331.6030703
[2025-04-04 00:07:21] 2025-04-04 04:06:58,567 | INFO     | mean y: 2517334.00877193
[2025-04-04 00:07:21] 2025-04-04 04:06:58,567 | INFO     | -- intersect: -19674733982.973724
[2025-04-04 00:07:21] 2025-04-04 04:06:58,567 | INFO     | intersect: -19674733982.973724
[2025-04-04 00:07:21] 2025-04-04 04:06:58,567 | INFO     | chi2: 6.440497464906237
[2025-04-04 00:07:21] 2025-04-04 04:06:58,567 | INFO     | current chi2=6.440497464906237 (change=19.607005701035334 %)
[2025-04-04 00:07:21] 2025-04-04 04:06:58,568 | INFO     | right removable region: 455
[2025-04-04 00:07:21] 2025-04-04 04:06:58,568 | INFO     | sum of square deviations: 29401449773.155617
[2025-04-04 00:07:21] 2025-04-04 04:06:58,572 | INFO     | sum of deviations: 132973516642.41234
[2025-04-04 00:07:21] 2025-04-04 04:06:58,572 | INFO     | mean x: 1743725636.6030703
[2025-04-04 00:07:21] 2025-04-04 04:06:58,572 | INFO     | mean y: 2529394.99122807
[2025-04-04 00:07:21] 2025-04-04 04:06:58,572 | INFO     | -- intersect: -7883793617.90805
[2025-04-04 00:07:21] 2025-04-04 04:06:58,572 | INFO     | intersect: -7883793617.90805
[2025-04-04 00:07:21] 2025-04-04 04:06:58,573 | INFO     | chi2: 4.67160561743495
[2025-04-04 00:07:21] 2025-04-04 04:06:58,573 | INFO     | current chi2=4.67160561743495 (change=41.68705665736539 %)
[2025-04-04 00:07:21] 2025-04-04 04:06:58,573 | INFO     | sum of square deviations: 28444840758.101967
[2025-04-04 00:07:21] 2025-04-04 04:06:58,577 | INFO     | sum of deviations: 36358510729.83597
[2025-04-04 00:07:21] 2025-04-04 04:06:58,577 | INFO     | mean x: 1743725789.1042128
[2025-04-04 00:07:21] 2025-04-04 04:06:58,577 | INFO     | mean y: 2544792.8758314857
[2025-04-04 00:07:21] 2025-04-04 04:06:58,578 | INFO     | -- intersect: -2226304837.613984
[2025-04-04 00:07:21] 2025-04-04 04:06:58,578 | INFO     | intersect: -2226304837.613984
[2025-04-04 00:07:21] 2025-04-04 04:06:58,578 | INFO     | chi2: 3.128013727420538
[2025-04-04 00:07:21] 2025-04-04 04:06:58,578 | INFO     | current chi2=3.128013727420538 (change=33.041999184467876 %)
[2025-04-04 00:07:21] 2025-04-04 04:06:58,579 | INFO     | sum of square deviations: 27509208880.547028
[2025-04-04 00:07:21] 2025-04-04 04:06:58,583 | INFO     | sum of deviations: -48759251433.17488
[2025-04-04 00:07:21] 2025-04-04 04:06:58,583 | INFO     | mean x: 1743725941.6053813
[2025-04-04 00:07:21] 2025-04-04 04:06:58,583 | INFO     | mean y: 2558658.322869955
[2025-04-04 00:07:21] 2025-04-04 04:06:58,583 | INFO     | -- intersect: 3093260829.6023116
[2025-04-04 00:07:21] 2025-04-04 04:06:58,583 | INFO     | intersect: 3093260829.6023116
[2025-04-04 00:07:21] 2025-04-04 04:06:58,583 | INFO     | chi2: 1.911834970238968
[2025-04-04 00:07:21] 2025-04-04 04:06:58,584 | INFO     | current chi2=1.911834970238968 (change=38.88022442230363 %)
[2025-04-04 00:07:21] 2025-04-04 04:06:58,584 | INFO     | sum of square deviations: 26594321577.99093
[2025-04-04 00:07:21] 2025-04-04 04:06:58,588 | INFO     | sum of deviations: -72317190477.025
[2025-04-04 00:07:21] 2025-04-04 04:06:58,588 | INFO     | mean x: 1743726094.106576
[2025-04-04 00:07:21] 2025-04-04 04:06:58,588 | INFO     | mean y: 2562574.0430839
[2025-04-04 00:07:21] 2025-04-04 04:06:58,588 | INFO     | -- intersect: 4744227884.716912
[2025-04-04 00:07:21] 2025-04-04 04:06:58,588 | INFO     | intersect: 4744227884.716912
[2025-04-04 00:07:21] 2025-04-04 04:06:58,588 | INFO     | chi2: 1.791764046636748
[2025-04-04 00:07:21] 2025-04-04 04:06:58,588 | INFO     | current chi2=1.791764046636748 (change=6.280402099100217 %)
[2025-04-04 00:07:21] 2025-04-04 04:06:58,588 | INFO     | left removable region: 40
[2025-04-04 00:07:21] 2025-04-04 04:06:58,589 | INFO     | sum of square deviations: 22162398784.120758
[2025-04-04 00:07:21] 2025-04-04 04:06:58,593 | INFO     | sum of deviations: -18580267967.83134
[2025-04-04 00:07:21] 2025-04-04 04:06:58,593 | INFO     | mean x: 1743726521.1084337
[2025-04-04 00:07:21] 2025-04-04 04:06:58,599 | INFO     | mean y: 2574356.551807229
[2025-04-04 00:07:21] 2025-04-04 04:06:58,599 | INFO     | -- intersect: 1464460605.4366822
[2025-04-04 00:07:21] 2025-04-04 04:06:58,599 | INFO     | intersect: 1464460605.4366822
[2025-04-04 00:07:21] 2025-04-04 04:06:58,600 | INFO     | chi2: 0.0682365215133352
[2025-04-04 00:07:21] 2025-04-04 04:06:58,600 | INFO     | -- intersect: 1464460605.4366822
[2025-04-04 00:07:21] 2025-04-04 04:06:58,600 | INFO     | current memory leak: -0.84 B/s (using 415 data points, chi2=0.07)
[2025-04-04 00:07:21] 2025-04-04 04:06:58,601 | INFO     | ..............................
[2025-04-04 00:07:21] 2025-04-04 04:06:58,601 | INFO     | . Timing measurements:
[2025-04-04 00:07:21] 2025-04-04 04:06:58,601 | INFO     | . get job = 0 s
[2025-04-04 00:07:21] 2025-04-04 04:06:58,601 | INFO     | . initial setup = 6 s
[2025-04-04 00:07:21] 2025-04-04 04:06:58,601 | INFO     | . payload setup = 59 s
[2025-04-04 00:07:21] 2025-04-04 04:06:58,601 | INFO     | . stage-in = 0 s
[2025-04-04 00:07:21] 2025-04-04 04:06:58,601 | INFO     | . payload execution = 28145 s
[2025-04-04 00:07:21] 2025-04-04 04:06:58,601 | INFO     | . stage-out = 5 s
[2025-04-04 00:07:21] 2025-04-04 04:06:58,601 | INFO     | . log creation = 1 s
[2025-04-04 00:07:21] 2025-04-04 04:06:58,601 | INFO     | ..............................
[2025-04-04 00:07:21] 2025-04-04 04:06:58,898 | INFO     | 
[2025-04-04 00:07:21] 2025-04-04 04:06:58,898 | INFO     | job summary report
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | --------------------------------------------------
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | PanDA job id: 6585556085
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | task id: 43634898
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | errors: (none)
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | pilot state: finished 
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | transexitcode: 0
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | exeerrorcode: 0
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | exeerrordiag: 
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | exitcode: 0
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | exitmsg: OK
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | cpuconsumptiontime: 66214 s
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | nevents: 400
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | neventsw: 0
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | pid: 59721
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | pgrp: 59721
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | corecount: 8
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | event service: False
[2025-04-04 00:07:21] 2025-04-04 04:06:58,899 | INFO     | sizes: {0: 2417173, 1: 2417428, 2: 2417456, 12: 2417456, 23: 2417484, 34: 2417512, 45: 2417668, 47: 2417902, 55: 2417958, 28208: 2454280, 28209: 2454279, 28216: 24
[2025-04-04 00:07:21] 2025-04-04 04:06:58,900 | INFO     | --------------------------------------------------
[2025-04-04 00:07:21] 2025-04-04 04:06:58,900 | INFO     | 
[2025-04-04 00:07:21] 2025-04-04 04:06:58,900 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-04 00:07:21] 2025-04-04 04:06:59,092 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,092 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,092 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,092 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,092 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,092 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,092 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,093 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,093 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,093 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,093 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,093 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,093 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,093 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,093 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,093 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,093 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 00:07:21] 2025-04-04 04:06:59,093 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,093 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 00:07:21] 2025-04-04 04:06:59,094 | INFO     | job 6585556085 has completed (purged errors)
[2025-04-04 00:07:21] 2025-04-04 04:06:59,094 | INFO     | overall cleanup function is called
[2025-04-04 00:07:21] 2025-04-04 04:07:00,105 | INFO     | --- collectZombieJob: --- 10, [59721]
[2025-04-04 00:07:21] 2025-04-04 04:07:00,105 | INFO     | zombie collector waiting for pid 59721
[2025-04-04 00:07:21] 2025-04-04 04:07:00,105 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 00:07:21] 2025-04-04 04:07:00,105 | INFO     | collected zombie processes
[2025-04-04 00:07:21] 2025-04-04 04:07:00,106 | INFO     | will attempt to kill all subprocesses of pid=59721
[2025-04-04 00:07:21] 2025-04-04 04:07:02,886 | INFO     | process IDs to be killed: [59721] (in reverse order)
[2025-04-04 00:07:21] 2025-04-04 04:07:05,693 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 00:07:21] 2025-04-04 04:07:05,693 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 00:07:21] 2025-04-04 04:07:05,710 | INFO     | did not find any defunct processes belonging to 59721
[2025-04-04 00:07:21] 2025-04-04 04:07:05,724 | INFO     | did not find any defunct processes belonging to 59721
[2025-04-04 00:07:21] 2025-04-04 04:07:05,725 | INFO     | ready for new job
[2025-04-04 00:07:21] 2025-04-04 04:07:05,725 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 00:07:21] 2025-04-04 04:07:05,727 | INFO     | **************************************
[2025-04-04 00:07:21] 2025-04-04 04:07:05,727 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-04 00:07:21] 2025-04-04 04:07:05,727 | INFO     | **************************************
[2025-04-04 00:07:21] 2025-04-04 04:07:05,727 | INFO     | 
[2025-04-04 00:07:21] 2025-04-04 04:07:05,731 | INFO     | architecture information:
[2025-04-04 00:07:21] 2025-04-04 04:07:05,747 | INFO     | executing command: cat /etc/os-release
[2025-04-04 00:07:21] 2025-04-04 04:07:05,870 | INFO     | cat /etc/os-release:
[2025-04-04 00:07:21] NAME="CentOS Linux"
[2025-04-04 00:07:21] VERSION="7 (Core)"
[2025-04-04 00:07:21] ID="centos"
[2025-04-04 00:07:21] ID_LIKE="rhel fedora"
[2025-04-04 00:07:21] VERSION_ID="7"
[2025-04-04 00:07:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 00:07:21] ANSI_COLOR="0;31"
[2025-04-04 00:07:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 00:07:21] HOME_URL="https://www.centos.org/"
[2025-04-04 00:07:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 00:07:21] 
[2025-04-04 00:07:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 00:07:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 00:07:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 00:07:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 00:07:21] 
[2025-04-04 00:07:21] 2025-04-04 04:07:05,870 | INFO     | **************************************
[2025-04-04 00:07:21] 2025-04-04 04:07:06,373 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-04 00:07:21] 2025-04-04 04:07:06,559 | INFO     | sufficient remaining disk space (102407077888 B)
[2025-04-04 00:07:21] 2025-04-04 04:07:06,559 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 00:07:21] 2025-04-04 04:07:06,560 | INFO     | current server update state: UPDATING_FINAL
[2025-04-04 00:07:21] 2025-04-04 04:07:06,560 | INFO     | update_server=False
[2025-04-04 00:07:21] 2025-04-04 04:07:06,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 00:07:21] 2025-04-04 04:07:06,560 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 00:07:21] 2025-04-04 04:07:06,866 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-04 00:07:21] 2025-04-04 04:07:06,866 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-04 00:07:21] 2025-04-04 04:07:06,866 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 00:07:21] 2025-04-04 04:07:06,867 | INFO     | will abort loop
[2025-04-04 00:07:21] 2025-04-04 04:07:07,297 | INFO     | all job control threads have been joined
[2025-04-04 00:07:21] 2025-04-04 04:07:07,567 | INFO     | [job] retrieve thread has finished
[2025-04-04 00:07:21] 2025-04-04 04:07:07,597 | INFO     | all data control threads have been joined
[2025-04-04 00:07:21] 2025-04-04 04:07:07,773 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 00:07:21] 2025-04-04 04:07:07,835 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 00:07:21] 2025-04-04 04:07:07,855 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 00:07:21] 2025-04-04 04:07:07,879 | INFO     | [job] job monitor thread has finished
[2025-04-04 00:07:21] 2025-04-04 04:07:08,015 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 00:07:21] 2025-04-04 04:07:08,045 | INFO     | all payload control threads have been joined
[2025-04-04 00:07:21] 2025-04-04 04:07:08,215 | INFO     | [job] validate thread has finished
[2025-04-04 00:07:21] 2025-04-04 04:07:08,219 | INFO     | [payload] failed_post thread has finished
[2025-04-04 00:07:21] 2025-04-04 04:07:08,297 | INFO     | [data] copytool_in thread has finished
[2025-04-04 00:07:21] 2025-04-04 04:07:08,322 | INFO     | [job] control thread has finished
[2025-04-04 00:07:21] 2025-04-04 04:07:08,359 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 00:07:21] 2025-04-04 04:07:08,372 | INFO     | [payload] validate_post thread has finished
[2025-04-04 00:07:21] 2025-04-04 04:07:08,573 | INFO     | [data] copytool_out thread has finished
[2025-04-04 00:07:21] 2025-04-04 04:07:08,607 | INFO     | [data] control thread has finished
[2025-04-04 00:07:21] 2025-04-04 04:07:08,839 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 00:07:21] 2025-04-04 04:07:09,067 | INFO     | [job] queue monitor thread has finished
[2025-04-04 00:07:21] 2025-04-04 04:07:09,068 | INFO     | [payload] control thread has finished
[2025-04-04 00:07:21] 2025-04-04 04:07:10,513 | INFO     | PID=86319 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-04 00:07:21] 2025-04-04 04:07:10,513 | INFO     | .. there are 44 such processes running
[2025-04-04 00:07:21] 2025-04-04 04:07:10,517 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 00:07:21] 2025-04-04 04:07:10,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 00:07:21] 2025-04-04 04:07:10,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 00:07:21] 2025-04-04 04:07:11,804 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 00:07:21] 2025-04-04 04:07:13,394 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139994568619840)>', '<ExcThread(monitor, started 139993913747200)>']
[2025-04-04 00:07:21] 2025-04-04 04:07:13,565 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 00:07:21] 2025-04-04 04:07:13,565 | INFO     | [monitor] control thread has ended
[2025-04-04 00:07:21] 2025-04-04 04:07:18,419 | INFO     | all workflow threads have been joined
[2025-04-04 00:07:21] 2025-04-04 04:07:18,419 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 00:07:21] 2025-04-04 04:07:18,423 | INFO     | traces error code: 0
[2025-04-04 00:07:21] 2025-04-04 04:07:18,423 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 00:07:21] 2025-04-04 04:07:19,157 [wrapper] ==== pilot stdout END ====
[2025-04-04 00:07:21] 2025-04-04 04:07:19,203 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 00:07:21] 2025-04-04 04:07:19,243 [wrapper] pilotpid: 86319
[2025-04-04 00:07:21] 2025-04-04 04:07:19,263 [wrapper] Pilot exit status: 0
[2025-04-04 00:07:21] 2025-04-04 04:07:19,413 [wrapper] pandaids: 6585556085
[2025-04-04 00:07:21] 2025-04-04 04:07:20,060 [wrapper] cleanup supervisor_pilot 68035 86320
[2025-04-04 00:07:21] 2025-04-04 04:07:20,068 [wrapper] Test setup, not cleaning
[2025-04-04 00:07:21] 2025-04-04 04:07:20,098 [wrapper] apfmon messages muted
[2025-04-04 00:07:21] 2025-04-04 04:07:20,162 [wrapper] ==== wrapper stdout END ====
[2025-04-04 00:07:21] 2025-04-04 04:07:20,181 [wrapper] ==== wrapper stderr END ====
[2025-04-04 00:07:21]  *** Error codes and diagnostics ***
[2025-04-04 00:07:21]     "exeErrorCode": 0,
[2025-04-04 00:07:21]     "exeErrorDiag": "",
[2025-04-04 00:07:21]     "pilotErrorCode": 0,
[2025-04-04 00:07:21]     "pilotErrorDiag": "",
[2025-04-04 00:07:21]  *** Listing of results directory ***
[2025-04-04 00:07:21] total 679116
[2025-04-04 00:07:21] -rw-r--r-- 1 boincer umatlas    495897 Apr  3 11:58 pilot3.tar.gz
[2025-04-04 00:07:21] -rw-r--r-- 1 boincer umatlas      5111 Apr  3 12:01 queuedata.json
[2025-04-04 00:07:21] -rwx------ 1 boincer umatlas     37140 Apr  3 12:04 runpilot2-wrapper.sh
[2025-04-04 00:07:21] -rw-r--r-- 1 boincer umatlas       100 Apr  3 16:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 00:07:21] -rwxr-xr-x 1 boincer umatlas      7986 Apr  3 16:12 run_atlas
[2025-04-04 00:07:21] -rw-r--r-- 1 boincer umatlas       105 Apr  3 16:12 job.xml
[2025-04-04 00:07:21] -rw-r--r-- 2 boincer umatlas 362668669 Apr  3 16:12 EVNT.43634896._000597.pool.root.1
[2025-04-04 00:07:21] -rw-r--r-- 2 boincer umatlas     17569 Apr  3 16:12 start_atlas.sh
[2025-04-04 00:07:21] drwxrwx--x 2 boincer umatlas      4096 Apr  3 16:12 shared
[2025-04-04 00:07:21] -rw-r--r-- 2 boincer umatlas    508890 Apr  3 16:12 input.tar.gz
[2025-04-04 00:07:21] -rw-r--r-- 1 boincer umatlas         0 Apr  3 16:12 boinc_lockfile
[2025-04-04 00:07:21] -rw-r--r-- 1 boincer umatlas      2600 Apr  3 16:12 pandaJob.out
[2025-04-04 00:07:21] -rw------- 1 boincer umatlas       424 Apr  3 16:12 setup.sh.local
[2025-04-04 00:07:21] -rw------- 1 boincer umatlas    979952 Apr  3 16:13 agis_schedconf.cvmfs.json
[2025-04-04 00:07:21] drwx------ 4 boincer umatlas      4096 Apr  3 16:14 pilot3
[2025-04-04 00:07:21] -rw-r--r-- 1 boincer umatlas      6303 Apr  4 00:02 init_data.xml
[2025-04-04 00:07:21] -rw------- 1 boincer umatlas 323253038 Apr  4 00:03 HITS.43634898._015556.pool.root.1
[2025-04-04 00:07:21] -rw-r--r-- 1 boincer umatlas       531 Apr  4 00:04 boinc_task_state.xml
[2025-04-04 00:07:21] -rw------- 1 boincer umatlas      1085 Apr  4 00:05 memory_monitor_summary.json
[2025-04-04 00:07:21] -rw------- 1 boincer umatlas   1603525 Apr  4 00:05 agis_ddmendpoints.agis.ALL.json
[2025-04-04 00:07:21] -rw------- 1 boincer umatlas    527693 Apr  4 00:05 log.43634898._015556.job.log.tgz.1
[2025-04-04 00:07:21] -rw------- 1 boincer umatlas        95 Apr  4 00:06 pilot_heartbeat.json
[2025-04-04 00:07:21] -rw------- 1 boincer umatlas      7754 Apr  4 00:06 heartbeat.json
[2025-04-04 00:07:21] -rw-r--r-- 1 boincer umatlas      8192 Apr  4 00:07 boinc_mmap_file
[2025-04-04 00:07:21] -rw-r--r-- 1 boincer umatlas        28 Apr  4 00:07 wrapper_checkpoint.txt
[2025-04-04 00:07:21] -rw------- 1 boincer umatlas      4933 Apr  4 00:07 pilotlog.txt
[2025-04-04 00:07:21] -rw------- 1 boincer umatlas   2301049 Apr  4 00:07 log.43634898._015556.job.log.1
[2025-04-04 00:07:21] -rw------- 1 boincer umatlas       357 Apr  4 00:07 output.list
[2025-04-04 00:07:21] -rw-r--r-- 1 boincer umatlas       620 Apr  4 00:07 runtime_log
[2025-04-04 00:07:21] -rw------- 1 boincer umatlas   2846720 Apr  4 00:07 result.tar.gz
[2025-04-04 00:07:21] -rw-r--r-- 1 boincer umatlas     11014 Apr  4 00:07 runtime_log.err
[2025-04-04 00:07:21] -rw------- 1 boincer umatlas       664 Apr  4 00:07 836MDm7DcK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmsZHLDmbwEnkn.diag
[2025-04-04 00:07:21] -rw-r--r-- 1 boincer umatlas     20714 Apr  4 00:07 stderr.txt
[2025-04-04 00:07:21] HITS file was successfully produced:
[2025-04-04 00:07:21] -rw------- 1 boincer umatlas 323253038 Apr  4 00:03 shared/HITS.pool.root.1
[2025-04-04 00:07:21]  *** Contents of shared directory: ***
[2025-04-04 00:07:21] total 673156
[2025-04-04 00:07:21] -rw-r--r-- 2 boincer umatlas 362668669 Apr  3 16:12 ATLAS.root_0
[2025-04-04 00:07:21] -rw-r--r-- 2 boincer umatlas     17569 Apr  3 16:12 start_atlas.sh
[2025-04-04 00:07:21] -rw-r--r-- 2 boincer umatlas    508890 Apr  3 16:12 input.tar.gz
[2025-04-04 00:07:21] -rw------- 1 boincer umatlas 323253038 Apr  4 00:03 HITS.pool.root.1
[2025-04-04 00:07:21] -rw------- 1 boincer umatlas   2846720 Apr  4 00:07 result.tar.gz
00:07:22 (56013): run_atlas exited; CPU time 65544.808949
00:07:22 (56013): called boinc_finish(0)

</stderr_txt>
]]>

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