Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-04 04:17:13 (228073): Detected: vboxwrapper 26206
2025-04-04 04:17:13 (228073): Detected: BOINC client v8.0.4
2025-04-04 04:17:14 (228073): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-04-04 04:17:14 (228073): Successfully copied 'init_data.xml' to the shared directory.
2025-04-04 04:17:14 (228073): Create VM. (boinc_537fa8550413053c, slot#2)
2025-04-04 04:17:15 (228073): Setting Memory Size for VM. (4300MB)
2025-04-04 04:17:15 (228073): Setting CPU Count for VM. (3)
2025-04-04 04:17:16 (228073): Setting Chipset Options for VM.
2025-04-04 04:17:17 (228073): Setting Graphics Controller Options for VM.
2025-04-04 04:17:17 (228073): Setting Boot Options for VM.
2025-04-04 04:17:18 (228073): Setting Network Configuration for NAT.
2025-04-04 04:17:19 (228073): Enabling VM Network Access.
2025-04-04 04:17:20 (228073): Disabling USB Support for VM.
2025-04-04 04:17:20 (228073): Disabling COM Port Support for VM.
2025-04-04 04:17:20 (228073): Disabling LPT Port Support for VM.
2025-04-04 04:17:20 (228073): Disabling Audio Support for VM.
2025-04-04 04:17:20 (228073): Disabling Clipboard Support for VM.
2025-04-04 04:17:20 (228073): Disabling Drag and Drop Support for VM.
2025-04-04 04:17:20 (228073): Adding storage controller(s) to VM.
2025-04-04 04:17:20 (228073): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-04 04:17:22 (228073): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-04 04:17:22 (228073): forwarding host port 36681 to guest port 80
2025-04-04 04:17:22 (228073): Enabling remote desktop for VM.
2025-04-04 04:17:22 (228073): Required extension pack not installed, remote desktop not enabled.
2025-04-04 04:17:22 (228073): Enabling shared directory for VM.
2025-04-04 04:17:23 (228073): Starting VM using VBoxManage interface. (boinc_537fa8550413053c, slot#2)
2025-04-04 04:17:24 (228073): Successfully started VM. (PID = '228537')
2025-04-04 04:17:24 (228073): Reporting VM Process ID to BOINC.
2025-04-04 04:17:24 (228073): Guest Log: BIOS: VirtualBox 7.0.20
2025-04-04 04:17:24 (228073): Guest Log: CPUID EDX: 0x178bfbff
2025-04-04 04:17:24 (228073): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-04 04:17:24 (228073): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-04 04:17:24 (228073): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-04 04:17:24 (228073): Detected: Web Application Enabled (http://localhost:36681)
2025-04-04 04:17:24 (228073): Preference change detected
2025-04-04 04:17:24 (228073): Setting CPU throttle for VM. (50%)
2025-04-04 04:17:24 (228073): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-04 04:17:26 (228073): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-04 04:17:26 (228073): Guest Log: BIOS: Booting from Hard Disk...
2025-04-04 04:17:30 (228073): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-04 04:17:30 (228073): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-04 04:17:30 (228073): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-04 04:17:46 (228073): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-04 04:17:46 (228073): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-04 04:18:05 (228073): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-04 04:18:05 (228073): Guest Log: 00:00:00.000284 main     Log opened 2025-04-03T19:18:03.938837000Z
2025-04-04 04:18:05 (228073): Guest Log: 00:00:00.000456 main     OS Product: Linux
2025-04-04 04:18:05 (228073): Guest Log: 00:00:00.000507 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-04 04:18:05 (228073): Guest Log: 00:00:00.000553 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-04 04:18:05 (228073): Guest Log: 00:00:00.000634 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-04 04:18:05 (228073): Guest Log: 00:00:00.000636 main     Process ID: 1295
2025-04-04 04:18:05 (228073): Guest Log: 00:00:00.000637 main     Package type: LINUX_64BITS_GENERIC
2025-04-04 04:18:05 (228073): Guest Log: 00:00:00.002422 main     5.2.32 r132073 started. Verbose level = 0
2025-04-04 04:18:05 (228073): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-04 04:18:05 (228073): Guest Log: [INFO] Mounting shared directory
2025-04-04 04:18:05 (228073): Guest Log: [INFO] Checking for init_data.xml
2025-04-04 04:18:13 (228073): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-04 04:18:13 (228073): Guest Log: [INFO] Detected branch: prod
2025-04-04 04:18:13 (228073): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-04 04:18:13 (228073): Guest Log: Copying input files
2025-04-04 04:18:17 (228073): VM state change detected. (old = 'running', new = 'paused')
2025-04-04 04:18:38 (228073): VM state change detected. (old = 'paused', new = 'running')
2025-04-04 04:18:41 (228073): Guest Log: Copied input files into RunAtlas.
2025-04-04 04:18:41 (228073): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-04 04:18:41 (228073): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-04 04:18:41 (228073): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-04 04:18:41 (228073): Guest Log: Further information can be found at the LHC@home message board.
2025-04-04 04:18:55 (228073): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-04 04:18:55 (228073): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-04 04:18:55 (228073): Guest Log: 2.6.3.0 1572 0 30032 144463 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-04 04:18:58 (228073): Guest Log: copied the webapp to /var/www
2025-04-04 04:18:58 (228073): Guest Log: ATHENA_PROC_NUMBER=3
2025-04-04 04:18:58 (228073): Guest Log: ATHENA_CORE_NUMBER=3
2025-04-04 04:18:58 (228073): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-04 04:18:58 (228073): Guest Log:  *** Starting ATLAS job. (PandaID=6584966354 taskID=44004367) ***
2025-04-04 04:29:21 (228073): Guest Log:  *** Job finished ***
2025-04-04 04:29:21 (228073): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:46,586 | INFO     | [data] copytool_out thread has finished
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:46,737 | INFO     | [job] queue monitor thread has finished
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:49,544 | INFO     | [data] queue_monitor thread has finished
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:51,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139949985732416)>', '<ExcThread(monitor, started 139949386999552)>']
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:52,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:52,165 | INFO     | [monitor] control thread has ended
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:56,610 | INFO     | all workflow threads have been joined
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:56,611 | INFO     | end of generic workflow (traces error code: 0)
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:56,612 | INFO     | traces error code: 0
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:56,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:57,029 [wrapper] ==== pilot stdout END ====
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:57,053 [wrapper] ==== wrapper stdout RESUME ====
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:57,074 [wrapper] pilotpid: 5900
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:57,096 [wrapper] Pilot exit status: 0
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:57,190 [wrapper] pandaids: 6584966354
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:57,377 [wrapper] cleanup supervisor_pilot  5906 5901
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:57,405 [wrapper] Test setup, not cleaning
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:57,427 [wrapper] apfmon messages muted
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:57,448 [wrapper] ==== wrapper stdout END ====
2025-04-04 04:29:21 (228073): Guest Log: 2025-04-03 19:28:57,497 [wrapper] ==== wrapper stderr END ====
2025-04-04 04:29:21 (228073): Guest Log:  *** Error codes and diagnostics ***
2025-04-04 04:29:21 (228073): Guest Log:     "exeErrorCode": 65,
2025-04-04 04:29:21 (228073): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-04-04 04:29:21 (228073): Guest Log:     "pilotErrorCode": 1305,
2025-04-04 04:29:21 (228073): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-04-04 04:29:21 (228073): Guest Log:  *** Listing of results directory ***
2025-04-04 04:29:21 (228073): Guest Log: total 3896
2025-04-04 04:29:21 (228073): Guest Log: -rw-r--r--. 1 atlas atlas  494584 Apr  3 07:11 pilot3.tar.gz
2025-04-04 04:29:21 (228073): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Apr  3 07:25 queuedata.json
2025-04-04 04:29:21 (228073): Guest Log: -rwx------. 1 atlas atlas   37140 Apr  3 07:27 runpilot2-wrapper.sh
2025-04-04 04:29:21 (228073): Guest Log: -rw-r--r--. 1 atlas atlas   17571 Apr  3 19:18 start_atlas.sh
2025-04-04 04:29:21 (228073): Guest Log: -rw-r--r--. 1 atlas atlas    6423 Apr  3 19:18 init_data.xml
2025-04-04 04:29:21 (228073): Guest Log: -rw-r--r--. 1 atlas atlas  507245 Apr  3 19:18 input.tar.gz
2025-04-04 04:29:21 (228073): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr  3 19:18 EVNT.44004365._000341.pool.root.1 -> /data/./ATLAS.root_0
2025-04-04 04:29:21 (228073): Guest Log: -rw-r--r--. 1 atlas atlas    2549 Apr  3 19:18 pandaJob.out
2025-04-04 04:29:21 (228073): Guest Log: -rw-------. 1 atlas atlas     424 Apr  3 19:18 setup.sh.local
2025-04-04 04:29:21 (228073): Guest Log: -rw-------. 1 atlas atlas  979952 Apr  3 19:20 agis_schedconf.cvmfs.json
2025-04-04 04:29:21 (228073): Guest Log: -rw-------. 1 atlas atlas 1603525 Apr  3 19:20 agis_ddmendpoints.agis.ALL.json
2025-04-04 04:29:21 (228073): Guest Log: drwx------. 4 atlas atlas    4096 Apr  3 19:20 pilot3
2025-04-04 04:29:21 (228073): Guest Log: -rw-------. 1 atlas atlas    1012 Apr  3 19:25 memory_monitor_summary.json
2025-04-04 04:29:21 (228073): Guest Log: -rw-------. 1 atlas atlas   22245 Apr  3 19:26 log.44004367._008519.job.log.tgz.1
2025-04-04 04:29:21 (228073): Guest Log: -rw-------. 1 atlas atlas      95 Apr  3 19:28 pilot_heartbeat.json
2025-04-04 04:29:21 (228073): Guest Log: -rw-------. 1 atlas atlas    8397 Apr  3 19:28 heartbeat.json
2025-04-04 04:29:21 (228073): Guest Log: -rw-------. 1 atlas atlas    4588 Apr  3 19:28 pilotlog.txt
2025-04-04 04:29:21 (228073): Guest Log: -rw-------. 1 atlas atlas   93874 Apr  3 19:28 log.44004367._008519.job.log.1
2025-04-04 04:29:21 (228073): Guest Log: -rw-------. 1 atlas atlas     188 Apr  3 19:28 output.list
2025-04-04 04:29:21 (228073): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr  3 19:28 runtime_log
2025-04-04 04:29:21 (228073): Guest Log: -rw-------. 1 atlas atlas  133120 Apr  3 19:28 result.tar.gz
2025-04-04 04:29:21 (228073): Guest Log: -rw-------. 1 atlas atlas     643 Apr  3 19:28 vUxLDmRAUK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmFqGLDmm08kon.diag
2025-04-04 04:29:21 (228073): Guest Log: -rw-r--r--. 1 atlas atlas   10789 Apr  3 19:28 runtime_log.err
2025-04-04 04:29:21 (228073): Guest Log: Looking for outputfile HITS.44004367._008519.pool.root.1
2025-04-04 04:29:21 (228073): Guest Log: No HITS file was produced
2025-04-04 04:29:21 (228073): Guest Log: Successfully finished the ATLAS job!
2025-04-04 04:29:21 (228073): Guest Log: Copying the results back to the shared directory!
2025-04-04 04:29:22 (228073): Guest Log:  *** Contents of shared directory: ***
2025-04-04 04:29:22 (228073): Guest Log: total 218044
2025-04-04 04:29:22 (228073): Guest Log: -rw-r--r--. 1 root root 222601531 Apr  3 19:17 ATLAS.root_0
2025-04-04 04:29:22 (228073): Guest Log: -rw-r--r--. 1 root root      6423 Apr  3 19:17 init_data.xml
2025-04-04 04:29:22 (228073): Guest Log: -rw-r--r--. 1 root root    507245 Apr  3 19:17 input.tar.gz
2025-04-04 04:29:22 (228073): Guest Log: -rw-r--r--. 1 root root    133120 Apr  3  2025 result.tar.gz
2025-04-04 04:29:22 (228073): Guest Log: -rw-r--r--. 1 root root     17571 Apr  3 19:17 start_atlas.sh
2025-04-04 04:29:22 (228073): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-04 04:29:22 (228073): VM Completion File Detected.
2025-04-04 04:29:22 (228073): Powering off VM.
2025-04-04 04:29:22 (228073): Successfully stopped VM.
2025-04-04 04:29:22 (228073): Deregistering VM. (boinc_537fa8550413053c, slot#2)
2025-04-04 04:29:22 (228073): Removing network bandwidth throttle group from VM.
2025-04-04 04:29:22 (228073): Removing VM from VirtualBox.
04:29:27 (228073): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN