Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-04 15:51:11 (17996): Detected: vboxwrapper 26206
2025-04-04 15:51:11 (17996): Detected: BOINC client v7.16.5
2025-04-04 15:51:11 (17996): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2025-04-04 15:51:11 (17996): Successfully copied 'init_data.xml' to the shared directory.
2025-04-04 15:51:12 (17996): Create VM. (boinc_020b7f3257297ef2, slot#2)
2025-04-04 15:51:12 (17996): Setting Memory Size for VM. (4400MB)
2025-04-04 15:51:13 (17996): Setting CPU Count for VM. (4)
2025-04-04 15:51:13 (17996): Setting Chipset Options for VM.
2025-04-04 15:51:13 (17996): Setting Graphics Controller Options for VM.
2025-04-04 15:51:13 (17996): Setting Boot Options for VM.
2025-04-04 15:51:14 (17996): Setting Network Configuration for NAT.
2025-04-04 15:51:14 (17996): Enabling VM Network Access.
2025-04-04 15:51:14 (17996): Disabling USB Support for VM.
2025-04-04 15:51:14 (17996): Disabling COM Port Support for VM.
2025-04-04 15:51:15 (17996): Disabling LPT Port Support for VM.
2025-04-04 15:51:15 (17996): Disabling Audio Support for VM.
2025-04-04 15:51:15 (17996): Disabling Clipboard Support for VM.
2025-04-04 15:51:15 (17996): Disabling Drag and Drop Support for VM.
2025-04-04 15:51:16 (17996): Adding storage controller(s) to VM.
2025-04-04 15:51:16 (17996): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-04 15:51:16 (17996): Adding VirtualBox Guest Additions to VM.
2025-04-04 15:51:17 (17996): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-04 15:51:17 (17996): forwarding host port 56677 to guest port 80
2025-04-04 15:51:17 (17996): Enabling remote desktop for VM.
2025-04-04 15:51:18 (17996): Enabling shared directory for VM.
2025-04-04 15:51:18 (17996): Starting VM using VBoxManage interface. (boinc_020b7f3257297ef2, slot#2)
2025-04-04 15:51:22 (17996): Successfully started VM. (PID = '14548')
2025-04-04 15:51:22 (17996): Reporting VM Process ID to BOINC.
2025-04-04 15:51:22 (17996): Guest Log: BIOS: VirtualBox 5.2.44
2025-04-04 15:51:22 (17996): Guest Log: CPUID EDX: 0x178bfbff
2025-04-04 15:51:22 (17996): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-04 15:51:22 (17996): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-04 15:51:22 (17996): Detected: Web Application Enabled (http://localhost:56677)
2025-04-04 15:51:22 (17996): Detected: Remote Desktop Enabled (localhost:56678)
2025-04-04 15:51:22 (17996): Preference change detected
2025-04-04 15:51:22 (17996): Setting CPU throttle for VM. (100%)
2025-04-04 15:51:23 (17996): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-04 15:51:24 (17996): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-04 15:51:24 (17996): Guest Log: BIOS: Booting from Hard Disk...
2025-04-04 15:51:27 (17996): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-04 15:51:27 (17996): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-04 15:51:27 (17996): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-04 15:51:32 (17996): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-04 15:51:32 (17996): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-04 15:51:38 (17996): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-04 15:51:38 (17996): Guest Log: 00:00:00.000178 main     Log opened 2025-04-04T15:51:36.467163000Z
2025-04-04 15:51:38 (17996): Guest Log: 00:00:00.000285 main     OS Product: Linux
2025-04-04 15:51:38 (17996): Guest Log: 00:00:00.000326 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-04 15:51:38 (17996): Guest Log: 00:00:00.000356 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-04 15:51:38 (17996): Guest Log: 00:00:00.000384 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-04 15:51:38 (17996): Guest Log: 00:00:00.000385 main     Process ID: 1300
2025-04-04 15:51:38 (17996): Guest Log: 00:00:00.000385 main     Package type: LINUX_64BITS_GENERIC
2025-04-04 15:51:38 (17996): Guest Log: 00:00:00.001745 main     5.2.32 r132073 started. Verbose level = 0
2025-04-04 15:51:38 (17996): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-04 15:51:38 (17996): Guest Log: [INFO] Mounting shared directory
2025-04-04 15:51:38 (17996): Guest Log: [INFO] Checking for init_data.xml
2025-04-04 15:51:42 (17996): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-04 15:51:42 (17996): Guest Log: [INFO] Detected branch: prod
2025-04-04 15:51:42 (17996): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-04 15:51:42 (17996): Guest Log: Copying input files
2025-04-04 15:51:45 (17996): Guest Log: Copied input files into RunAtlas.
2025-04-04 15:51:45 (17996): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-04 15:51:45 (17996): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-04 15:51:45 (17996): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-04 15:51:45 (17996): Guest Log: Further information can be found at the LHC@home message board.
2025-04-04 15:51:48 (17996): Guest Log: 00:00:10.003673 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 787 800 087 000ns (GuestNow=1 743 771 108 670 266 000 ns GuestLast=1 743 781 896 470 353 000 ns fSetTimeLastLoop=true )
2025-04-04 15:51:54 (17996): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-04 15:51:54 (17996): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-04 15:51:54 (17996): Guest Log: 2.6.3.0 1577 0 30020 144489 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-04 15:51:55 (17996): Guest Log: copied the webapp to /var/www
2025-04-04 15:51:55 (17996): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-04 15:51:55 (17996): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-04 15:51:56 (17996): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-04 15:51:56 (17996): Guest Log:  *** Starting ATLAS job. (PandaID=6585460676 taskID=43634898) ***
2025-04-04 17:31:26 (17996): Status Report: Elapsed Time: '6000.000000'
2025-04-04 17:31:26 (17996): Status Report: CPU Time: '17223.093750'
2025-04-04 19:11:29 (17996): Status Report: Elapsed Time: '12000.000000'
2025-04-04 19:11:29 (17996): Status Report: CPU Time: '40846.875000'
2025-04-04 20:51:33 (17996): Status Report: Elapsed Time: '18000.000000'
2025-04-04 20:51:33 (17996): Status Report: CPU Time: '64209.843750'
2025-04-04 22:31:36 (17996): Status Report: Elapsed Time: '24000.000000'
2025-04-04 22:31:36 (17996): Status Report: CPU Time: '86880.687500'
2025-04-04 22:35:23 (17996): Guest Log:  *** Job finished ***
2025-04-04 22:35:23 (17996): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:11,424 | INFO     | [job] control thread has finished
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:11,963 | INFO     | [data] copytool_out thread has finished
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:15,254 | INFO     | [data] queue_monitor thread has finished
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:15,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139637244757824)>', '<ExcThread(monitor, started 139636793911040)>']
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:15,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:15,763 | INFO     | [monitor] control thread has ended
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:20,388 | INFO     | all workflow threads have been joined
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:20,388 | INFO     | end of generic workflow (traces error code: 0)
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:20,388 | INFO     | traces error code: 0
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:20,388 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:20,505 [wrapper] ==== pilot stdout END ====
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:20,510 [wrapper] ==== wrapper stdout RESUME ====
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:20,514 [wrapper] pilotpid: 5917
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:20,519 [wrapper] Pilot exit status: 0
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:20,632 [wrapper] pandaids: 6585460676
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:20,666 [wrapper] cleanup supervisor_pilot 26652 5918
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:20,676 [wrapper] Test setup, not cleaning
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:20,680 [wrapper] apfmon messages muted
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:20,685 [wrapper] ==== wrapper stdout END ====
2025-04-04 22:35:23 (17996): Guest Log: 2025-04-04 19:35:20,690 [wrapper] ==== wrapper stderr END ====
2025-04-04 22:35:23 (17996): Guest Log:  *** Error codes and diagnostics ***
2025-04-04 22:35:23 (17996): Guest Log:     "exeErrorCode": 0,
2025-04-04 22:35:23 (17996): Guest Log:     "exeErrorDiag": "",
2025-04-04 22:35:23 (17996): Guest Log:     "pilotErrorCode": 0,
2025-04-04 22:35:23 (17996): Guest Log:     "pilotErrorDiag": "",
2025-04-04 22:35:23 (17996): Guest Log:  *** Listing of results directory ***
2025-04-04 22:35:23 (17996): Guest Log: total 323156
2025-04-04 22:35:23 (17996): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr  3 15:27 pilot3.tar.gz
2025-04-04 22:35:23 (17996): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr  3 15:40 queuedata.json
2025-04-04 22:35:23 (17996): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  3 15:40 runpilot2-wrapper.sh
2025-04-04 22:35:23 (17996): Guest Log: -rwxr-xr-x. 1 atlas atlas      8857 Apr  4 12:51 init_data.xml
2025-04-04 22:35:23 (17996): Guest Log: -rwxr-xr-x. 1 atlas atlas    508890 Apr  4 12:51 input.tar.gz
2025-04-04 22:35:23 (17996): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr  4 12:51 start_atlas.sh
2025-04-04 22:35:23 (17996): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  4 12:51 EVNT.43634896._000263.pool.root.1 -> /data/./ATLAS.root_0
2025-04-04 22:35:23 (17996): Guest Log: -rw-r--r--. 1 atlas atlas      2596 Apr  4 12:51 pandaJob.out
2025-04-04 22:35:23 (17996): Guest Log: -rw-------. 1 atlas atlas       424 Apr  4 12:52 setup.sh.local
2025-04-04 22:35:23 (17996): Guest Log: -rw-------. 1 atlas atlas    979639 Apr  4 12:55 agis_schedconf.cvmfs.json
2025-04-04 22:35:23 (17996): Guest Log: drwx------. 4 atlas atlas      4096 Apr  4 12:55 pilot3
2025-04-04 22:35:23 (17996): Guest Log: -rw-------. 1 atlas atlas 322317726 Apr  4 19:34 HITS.43634898._015385.pool.root.1
2025-04-04 22:35:23 (17996): Guest Log: -rw-------. 1 atlas atlas        95 Apr  4 19:34 pilot_heartbeat.json
2025-04-04 22:35:23 (17996): Guest Log: -rw-------. 1 atlas atlas      1043 Apr  4 19:34 memory_monitor_summary.json
2025-04-04 22:35:23 (17996): Guest Log: -rw-------. 1 atlas atlas   1603525 Apr  4 19:34 agis_ddmendpoints.agis.ALL.json
2025-04-04 22:35:23 (17996): Guest Log: -rw-------. 1 atlas atlas    399163 Apr  4 19:34 log.43634898._015385.job.log.tgz.1
2025-04-04 22:35:23 (17996): Guest Log: -rw-------. 1 atlas atlas      7721 Apr  4 19:35 heartbeat.json
2025-04-04 22:35:23 (17996): Guest Log: -rw-------. 1 atlas atlas      4722 Apr  4 19:35 pilotlog.txt
2025-04-04 22:35:23 (17996): Guest Log: -rw-------. 1 atlas atlas   2012881 Apr  4 19:35 log.43634898._015385.job.log.1
2025-04-04 22:35:23 (17996): Guest Log: -rw-------. 1 atlas atlas       357 Apr  4 19:35 output.list
2025-04-04 22:35:23 (17996): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  4 19:35 runtime_log
2025-04-04 22:35:23 (17996): Guest Log: -rw-------. 1 atlas atlas   2426880 Apr  4 19:35 result.tar.gz
2025-04-04 22:35:23 (17996): Guest Log: -rw-------. 1 atlas atlas       671 Apr  4 19:35 UTENDmRrbK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmqXHLDm8ztQ7n.diag
2025-04-04 22:35:23 (17996): Guest Log: -rw-r--r--. 1 atlas atlas     10981 Apr  4 19:35 runtime_log.err
2025-04-04 22:35:23 (17996): Guest Log: Looking for outputfile HITS.43634898._015385.pool.root.1
2025-04-04 22:35:23 (17996): Guest Log: HITS file was successfully produced
2025-04-04 22:35:23 (17996): Guest Log: -rw-------. 1 atlas atlas 322317726 Apr  4 19:34 /home/atlas/RunAtlas/HITS.43634898._015385.pool.root.1
2025-04-04 22:35:25 (17996): Guest Log: Successfully finished the ATLAS job!
2025-04-04 22:35:25 (17996): Guest Log: Copying the results back to the shared directory!
2025-04-04 22:35:25 (17996): Guest Log:  *** Contents of shared directory: ***
2025-04-04 22:35:25 (17996): Guest Log: total 669372
2025-04-04 22:35:25 (17996): Guest Log: -rwxrwxrwx. 1 root root 360142696 Apr  4 12:51 ATLAS.root_0
2025-04-04 22:35:25 (17996): Guest Log: -rwxrwxrwx. 1 root root 322317726 Apr  4 19:35 HITS.pool.root.1
2025-04-04 22:35:25 (17996): Guest Log: -rwxrwxrwx. 1 root root      8857 Apr  4 12:51 init_data.xml
2025-04-04 22:35:25 (17996): Guest Log: -rwxrwxrwx. 1 root root    508890 Apr  3 19:26 input.tar.gz
2025-04-04 22:35:25 (17996): Guest Log: -rwxrwxrwx. 1 root root   2426880 Apr  4 19:35 result.tar.gz
2025-04-04 22:35:25 (17996): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr  3 19:26 start_atlas.sh
2025-04-04 22:35:25 (17996): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-04 22:35:25 (17996): VM Completion File Detected.
2025-04-04 22:35:25 (17996): Powering off VM.
2025-04-04 22:35:26 (17996): Successfully stopped VM.
2025-04-04 22:35:26 (17996): Deregistering VM. (boinc_020b7f3257297ef2, slot#2)
2025-04-04 22:35:26 (17996): Removing network bandwidth throttle group from VM.
2025-04-04 22:35:26 (17996): Removing VM from VirtualBox.
22:35:32 (17996): called boinc_finish(0)

</stderr_txt>
]]>

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