Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:18:43 (3763057): wrapper (7.7.26015): starting
14:18:43 (3763057): wrapper: running run_atlas (--nthreads 8)
[2025-04-03 14:18:43] Arguments: --nthreads 8
[2025-04-03 14:18:43] Threads: 8
[2025-04-03 14:18:43] Checking for CVMFS
[2025-04-03 14:18:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 14:18:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 14:18:45] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 14:18:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 14:18:47] 2.12.6.0 425763 23138 274564 144462 3 97 19852141 32935937 22361 130560 0 7437240 99.498 7953607 9049 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-03 14:18:47] CVMFS is ok
[2025-04-03 14:18:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-03 14:18:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-03 14:18:47] Further information can be found at the LHC@home message board.
[2025-04-03 14:18:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 14:18:47] Checking for apptainer binary...
[2025-04-03 14:18:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 14:18:47] Running /usr/bin/apptainer --version
[2025-04-03 14:18:47] apptainer version 1.4.0-1.el9
[2025-04-03 14:18:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 14:18:49] c6-12-25-1.aglt2.org
[2025-04-03 14:18:49] apptainer works
[2025-04-03 14:18:49] Set ATHENA_PROC_NUMBER=8
[2025-04-03 14:18:49] Set ATHENA_CORE_NUMBER=8
[2025-04-03 14:18:50] Starting ATLAS job with PandaID=6585059132
[2025-04-03 14:18:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 01:31:00]  *** The last 200 lines of the pilot log: ***
[2025-04-04 01:31:00] 2025-04-04 05:30:29,377 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 01:31:00] 2025-04-04 05:30:30,590 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-04 01:31:00] 2025-04-04 05:30:30,595 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6585059132/memory_monitor_summary.json (trf name=prmon)
[2025-04-04 01:31:00] 2025-04-04 05:30:30,597 | INFO     | extracted standard info from prmon json
[2025-04-04 01:31:00] 2025-04-04 05:30:30,597 | INFO     | extracted standard memory fields from prmon json
[2025-04-04 01:31:00] 2025-04-04 05:30:30,598 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-04 01:31:00] 2025-04-04 05:30:30,605 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-04 01:31:00] 2025-04-04 05:30:30,610 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-04 01:31:00] 2025-04-04 05:30:30,643 | INFO     | fitting pss+swap vs Time
[2025-04-04 01:31:00] 2025-04-04 05:30:30,645 | INFO     | model: linear, x: [1743704698.0, 1743704759.0, 1743704820.0, 1743704881.0, 1743704943.0, 1743705003.0, 1743705064.0, 1743705125.0, 1743705186.0, 1743705247.0, 1743
[2025-04-04 01:31:00] 2025-04-04 05:30:30,647 | INFO     | sum of square deviations: 86734454774.12222
[2025-04-04 01:31:00] 2025-04-04 05:30:30,742 | INFO     | sum of deviations: 397818922900.7427
[2025-04-04 01:31:00] 2025-04-04 05:30:30,743 | INFO     | mean x: 1743724615.9051988
[2025-04-04 01:31:00] 2025-04-04 05:30:30,743 | INFO     | mean y: 2045615.3990825687
[2025-04-04 01:31:00] 2025-04-04 05:30:30,743 | INFO     | -- intersect: -7995775439.007121
[2025-04-04 01:31:00] 2025-04-04 05:30:30,744 | INFO     | intersect: -7995775439.007121
[2025-04-04 01:31:00] 2025-04-04 05:30:30,760 | INFO     | chi2: 9.731474774878473
[2025-04-04 01:31:00] 2025-04-04 05:30:30,762 | INFO     | model: linear, x: [1743704698.0, 1743704759.0, 1743704820.0, 1743704881.0, 1743704943.0, 1743705003.0, 1743705064.0, 1743705125.0, 1743705186.0, 1743705247.0, 1743
[2025-04-04 01:31:00] 2025-04-04 05:30:30,775 | INFO     | sum of square deviations: 84760453743.50403
[2025-04-04 01:31:00] 2025-04-04 05:30:30,923 | INFO     | sum of deviations: 509939793343.80707
[2025-04-04 01:31:00] 2025-04-04 05:30:30,924 | INFO     | mean x: 1743724463.4144838
[2025-04-04 01:31:00] 2025-04-04 05:30:30,924 | INFO     | mean y: 2054254.275808937
[2025-04-04 01:31:00] 2025-04-04 05:30:30,948 | INFO     | -- intersect: -10488622154.948462
[2025-04-04 01:31:00] 2025-04-04 05:30:30,948 | INFO     | intersect: -10488622154.948462
[2025-04-04 01:31:00] 2025-04-04 05:30:30,951 | INFO     | chi2: 7.455774152170163
[2025-04-04 01:31:00] 2025-04-04 05:30:30,951 | INFO     | current chi2=7.455774152170163 (change=23.38495115440228 %)
[2025-04-04 01:31:00] 2025-04-04 05:30:30,961 | INFO     | right removable region: 648
[2025-04-04 01:31:00] 2025-04-04 05:30:30,964 | INFO     | model: linear, x: [1743705003.0, 1743705064.0, 1743705125.0, 1743705186.0, 1743705247.0, 1743705308.0, 1743705369.0, 1743705432.0, 1743705491.0, 1743705553.0, 1743
[2025-04-04 01:31:00] 2025-04-04 05:30:31,007 | INFO     | sum of square deviations: 84759972453.5039
[2025-04-04 01:31:00] 2025-04-04 05:30:31,192 | INFO     | sum of deviations: 231321425196.67166
[2025-04-04 01:31:00] 2025-04-04 05:30:31,193 | INFO     | mean x: 1743724768.4144838
[2025-04-04 01:31:00] 2025-04-04 05:30:31,218 | INFO     | mean y: 2058467.8859784284
[2025-04-04 01:31:00] 2025-04-04 05:30:31,218 | INFO     | -- intersect: -4756802193.632559
[2025-04-04 01:31:00] 2025-04-04 05:30:31,218 | INFO     | intersect: -4756802193.632559
[2025-04-04 01:31:00] 2025-04-04 05:30:31,221 | INFO     | chi2: 6.205340479796843
[2025-04-04 01:31:00] 2025-04-04 05:30:31,250 | INFO     | current chi2=6.205340479796843 (change=36.2343260055942 %)
[2025-04-04 01:31:00] 2025-04-04 05:30:31,252 | INFO     | model: linear, x: [1743705308.0, 1743705369.0, 1743705432.0, 1743705491.0, 1743705553.0, 1743705613.0, 1743705675.0, 1743705736.0, 1743705798.0, 1743705858.0, 1743
[2025-04-04 01:31:00] 2025-04-04 05:30:31,253 | INFO     | sum of square deviations: 82815637398.42244
[2025-04-04 01:31:00] 2025-04-04 05:30:31,463 | INFO     | sum of deviations: 125918589949.39105
[2025-04-04 01:31:00] 2025-04-04 05:30:31,464 | INFO     | mean x: 1743724920.9254658
[2025-04-04 01:31:00] 2025-04-04 05:30:31,464 | INFO     | mean y: 2066733.9456521738
[2025-04-04 01:31:00] 2025-04-04 05:30:31,464 | INFO     | -- intersect: -2649212543.737365
[2025-04-04 01:31:00] 2025-04-04 05:30:31,465 | INFO     | intersect: -2649212543.737365
[2025-04-04 01:31:00] 2025-04-04 05:30:31,492 | INFO     | chi2: 4.864413021396679
[2025-04-04 01:31:00] 2025-04-04 05:30:31,493 | INFO     | current chi2=4.864413021396679 (change=21.609248723191165 %)
[2025-04-04 01:31:00] 2025-04-04 05:30:31,493 | INFO     | left removable region: 20
[2025-04-04 01:31:00] 2025-04-04 05:30:31,495 | INFO     | model: linear, x: [1743705918.0, 1743705981.0, 1743706041.0, 1743706102.0, 1743706164.0, 1743706224.0, 1743706284.0, 1743706347.0, 1743706408.0, 1743706469.0, 1743
[2025-04-04 01:31:00] 2025-04-04 05:30:31,507 | INFO     | sum of square deviations: 76794815624.15935
[2025-04-04 01:31:00] 2025-04-04 05:30:31,866 | INFO     | sum of deviations: 78754742997.66562
[2025-04-04 01:31:00] 2025-04-04 05:30:31,866 | INFO     | mean x: 1743725042.94586
[2025-04-04 01:31:00] 2025-04-04 05:30:31,866 | INFO     | mean y: 2089373.8136942675
[2025-04-04 01:31:00] 2025-04-04 05:30:31,867 | INFO     | -- intersect: -1786138340.5138369
[2025-04-04 01:31:00] 2025-04-04 05:30:31,867 | INFO     | intersect: -1786138340.5138369
[2025-04-04 01:31:00] 2025-04-04 05:30:31,881 | INFO     | chi2: 0.8993424556988499
[2025-04-04 01:31:00] 2025-04-04 05:30:31,882 | INFO     | -- intersect: -1786138340.5138369
[2025-04-04 01:31:00] 2025-04-04 05:30:31,883 | INFO     | current memory leak: 1.03 B/s (using 628 data points, chi2=0.90)
[2025-04-04 01:31:00] 2025-04-04 05:30:31,913 | INFO     | monitor loop #2174: job 0:6585059132 is in state 'finished'
[2025-04-04 01:31:00] 2025-04-04 05:30:31,913 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-04 01:31:00] 2025-04-04 05:30:31,945 | INFO     | ..............................
[2025-04-04 01:31:00] 2025-04-04 05:30:31,946 | INFO     | . Timing measurements:
[2025-04-04 01:31:00] 2025-04-04 05:30:31,946 | INFO     | . get job = 1 s
[2025-04-04 01:31:00] 2025-04-04 05:30:31,946 | INFO     | . initial setup = 16 s
[2025-04-04 01:31:00] 2025-04-04 05:30:31,946 | INFO     | . payload setup = 71 s
[2025-04-04 01:31:00] 2025-04-04 05:30:31,946 | INFO     | . stage-in = 2 s
[2025-04-04 01:31:00] 2025-04-04 05:30:31,947 | INFO     | . payload execution = 39896 s
[2025-04-04 01:31:00] 2025-04-04 05:30:31,947 | INFO     | . stage-out = 14 s
[2025-04-04 01:31:00] 2025-04-04 05:30:31,947 | INFO     | . log creation = 2 s
[2025-04-04 01:31:00] 2025-04-04 05:30:31,947 | INFO     | ..............................
[2025-04-04 01:31:00] 2025-04-04 05:30:34,844 | INFO     | 
[2025-04-04 01:31:00] 2025-04-04 05:30:34,845 | INFO     | job summary report
[2025-04-04 01:31:00] 2025-04-04 05:30:34,846 | INFO     | --------------------------------------------------
[2025-04-04 01:31:00] 2025-04-04 05:30:34,846 | INFO     | PanDA job id: 6585059132
[2025-04-04 01:31:00] 2025-04-04 05:30:34,846 | INFO     | task id: 44004367
[2025-04-04 01:31:00] 2025-04-04 05:30:34,846 | INFO     | errors: (none)
[2025-04-04 01:31:00] 2025-04-04 05:30:34,846 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 01:31:00] 2025-04-04 05:30:34,847 | INFO     | pilot state: finished 
[2025-04-04 01:31:00] 2025-04-04 05:30:34,847 | INFO     | transexitcode: 0
[2025-04-04 01:31:00] 2025-04-04 05:30:34,847 | INFO     | exeerrorcode: 0
[2025-04-04 01:31:00] 2025-04-04 05:30:34,847 | INFO     | exeerrordiag: 
[2025-04-04 01:31:00] 2025-04-04 05:30:34,847 | INFO     | exitcode: 0
[2025-04-04 01:31:00] 2025-04-04 05:30:34,848 | INFO     | exitmsg: OK
[2025-04-04 01:31:00] 2025-04-04 05:30:34,848 | INFO     | cpuconsumptiontime: 112540 s
[2025-04-04 01:31:00] 2025-04-04 05:30:34,848 | INFO     | nevents: 400
[2025-04-04 01:31:00] 2025-04-04 05:30:34,848 | INFO     | neventsw: 0
[2025-04-04 01:31:00] 2025-04-04 05:30:34,848 | INFO     | pid: 3798387
[2025-04-04 01:31:00] 2025-04-04 05:30:34,849 | INFO     | pgrp: 3798387
[2025-04-04 01:31:00] 2025-04-04 05:30:34,849 | INFO     | corecount: 8
[2025-04-04 01:31:00] 2025-04-04 05:30:34,849 | INFO     | event service: False
[2025-04-04 01:31:00] 2025-04-04 05:30:34,849 | INFO     | sizes: {0: 2416444, 1: 2417045, 3: 2417129, 6: 2417185, 8: 2417356, 9: 2417384, 23: 2417540, 34: 2417568, 46: 2417596, 60: 2417596, 64: 2417830, 72: 2418166, 39973
[2025-04-04 01:31:00] 2025-04-04 05:30:34,849 | INFO     | --------------------------------------------------
[2025-04-04 01:31:00] 2025-04-04 05:30:34,850 | INFO     | 
[2025-04-04 01:31:00] 2025-04-04 05:30:34,850 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-04 01:31:00] 2025-04-04 05:30:35,192 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,193 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,193 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,194 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,194 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,194 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,194 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,194 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,195 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,195 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,195 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,195 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,254 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,254 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,255 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 01:31:00] 2025-04-04 05:30:35,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,255 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 01:31:00] 2025-04-04 05:30:35,256 | INFO     | job 6585059132 has completed (purged errors)
[2025-04-04 01:31:00] 2025-04-04 05:30:35,256 | INFO     | overall cleanup function is called
[2025-04-04 01:31:00] 2025-04-04 05:30:36,353 | INFO     | --- collectZombieJob: --- 10, [3798387]
[2025-04-04 01:31:00] 2025-04-04 05:30:36,353 | INFO     | zombie collector waiting for pid 3798387
[2025-04-04 01:31:00] 2025-04-04 05:30:36,353 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 01:31:00] 2025-04-04 05:30:36,354 | INFO     | collected zombie processes
[2025-04-04 01:31:00] 2025-04-04 05:30:36,354 | INFO     | will attempt to kill all subprocesses of pid=3798387
[2025-04-04 01:31:00] 2025-04-04 05:30:37,033 | INFO     | process IDs to be killed: [3798387] (in reverse order)
[2025-04-04 01:31:00] 2025-04-04 05:30:38,056 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 01:31:00] 2025-04-04 05:30:38,142 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 01:31:00] 2025-04-04 05:30:38,377 | INFO     | did not find any defunct processes belonging to 3798387
[2025-04-04 01:31:00] 2025-04-04 05:30:38,627 | INFO     | did not find any defunct processes belonging to 3798387
[2025-04-04 01:31:00] 2025-04-04 05:30:38,628 | INFO     | ready for new job
[2025-04-04 01:31:00] 2025-04-04 05:30:38,653 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 01:31:00] 2025-04-04 05:30:38,706 | INFO     | ***************************************
[2025-04-04 01:31:00] 2025-04-04 05:30:38,706 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-04 01:31:00] 2025-04-04 05:30:38,707 | INFO     | ***************************************
[2025-04-04 01:31:00] 2025-04-04 05:30:38,707 | INFO     | 
[2025-04-04 01:31:00] 2025-04-04 05:30:38,880 | INFO     | architecture information:
[2025-04-04 01:31:00] 2025-04-04 05:30:38,898 | INFO     | executing command: cat /etc/os-release
[2025-04-04 01:31:00] 2025-04-04 05:30:39,129 | INFO     | cat /etc/os-release:
[2025-04-04 01:31:00] NAME="CentOS Linux"
[2025-04-04 01:31:00] VERSION="7 (Core)"
[2025-04-04 01:31:00] ID="centos"
[2025-04-04 01:31:00] ID_LIKE="rhel fedora"
[2025-04-04 01:31:00] VERSION_ID="7"
[2025-04-04 01:31:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 01:31:00] ANSI_COLOR="0;31"
[2025-04-04 01:31:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 01:31:00] HOME_URL="https://www.centos.org/"
[2025-04-04 01:31:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 01:31:00] 
[2025-04-04 01:31:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 01:31:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 01:31:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 01:31:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 01:31:00] 
[2025-04-04 01:31:00] 2025-04-04 05:30:39,148 | INFO     | ***************************************
[2025-04-04 01:31:00] 2025-04-04 05:30:39,673 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-04 01:31:00] 2025-04-04 05:30:39,892 | INFO     | sufficient remaining disk space (72843526144 B)
[2025-04-04 01:31:00] 2025-04-04 05:30:39,893 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 01:31:00] 2025-04-04 05:30:39,894 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 01:31:00] 2025-04-04 05:30:39,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 01:31:00] 2025-04-04 05:30:40,116 | INFO     | all job control threads have been joined
[2025-04-04 01:31:00] 2025-04-04 05:30:40,505 | INFO     | all payload control threads have been joined
[2025-04-04 01:31:00] 2025-04-04 05:30:40,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 01:31:00] 2025-04-04 05:30:40,841 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 01:31:00] 2025-04-04 05:30:40,841 | INFO     | aborting loop
[2025-04-04 01:31:00] 2025-04-04 05:30:40,900 | INFO     | [job] retrieve thread has finished
[2025-04-04 01:31:00] 2025-04-04 05:30:40,911 | INFO     | all data control threads have been joined
[2025-04-04 01:31:00] 2025-04-04 05:30:40,976 | INFO     | [job] queue monitor thread has finished
[2025-04-04 01:31:00] 2025-04-04 05:30:41,251 | INFO     | [payload] failed_post thread has finished
[2025-04-04 01:31:00] 2025-04-04 05:30:41,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 01:31:00] 2025-04-04 05:30:41,415 | INFO     | [job] control thread has finished
[2025-04-04 01:31:00] 2025-04-04 05:30:41,545 | INFO     | [payload] control thread has finished
[2025-04-04 01:31:00] 2025-04-04 05:30:41,617 | INFO     | [payload] validate_post thread has finished
[2025-04-04 01:31:00] 2025-04-04 05:30:41,856 | INFO     | [job] job monitor thread has finished
[2025-04-04 01:31:00] 2025-04-04 05:30:41,976 | INFO     | [data] control thread has finished
[2025-04-04 01:31:00] 2025-04-04 05:30:42,202 | INFO     | PID=3771535 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-04 01:31:00] 2025-04-04 05:30:42,202 | INFO     | .. there are 25 such processes running
[2025-04-04 01:31:00] 2025-04-04 05:30:42,223 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 01:31:00] 2025-04-04 05:30:42,223 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 01:31:00] 2025-04-04 05:30:42,224 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 01:31:00] 2025-04-04 05:30:42,269 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 01:31:00] 2025-04-04 05:30:42,277 | INFO     | [job] validate thread has finished
[2025-04-04 01:31:00] 2025-04-04 05:30:42,285 | INFO     | [data] copytool_in thread has finished
[2025-04-04 01:31:00] 2025-04-04 05:30:42,304 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 01:31:00] 2025-04-04 05:30:42,305 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 01:31:00] 2025-04-04 05:30:42,438 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 01:31:00] 2025-04-04 05:30:42,774 | INFO     | [data] copytool_out thread has finished
[2025-04-04 01:31:00] 2025-04-04 05:30:45,446 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 01:31:00] 2025-04-04 05:30:46,222 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140088448182080)>', '<ExcThread(monitor, started 140087740331776)>']
[2025-04-04 01:31:00] 2025-04-04 05:30:46,247 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 01:31:00] 2025-04-04 05:30:46,248 | INFO     | [monitor] control thread has ended
[2025-04-04 01:31:00] 2025-04-04 05:30:51,259 | INFO     | all workflow threads have been joined
[2025-04-04 01:31:00] 2025-04-04 05:30:51,259 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 01:31:00] 2025-04-04 05:30:51,260 | INFO     | traces error code: 0
[2025-04-04 01:31:00] 2025-04-04 05:30:51,261 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 01:31:00] 2025-04-04 05:30:57,494 [wrapper] ==== pilot stdout END ====
[2025-04-04 01:31:00] 2025-04-04 05:30:57,595 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 01:31:00] 2025-04-04 05:30:57,634 [wrapper] pilotpid: 3771535
[2025-04-04 01:31:00] 2025-04-04 05:30:57,659 [wrapper] Pilot exit status: 0
[2025-04-04 01:31:00] 2025-04-04 05:30:57,812 [wrapper] pandaids: 6585059132
[2025-04-04 01:31:00] 2025-04-04 05:30:59,745 [wrapper] cleanup supervisor_pilot 2554307 3771536
[2025-04-04 01:31:00] 2025-04-04 05:30:59,765 [wrapper] Test setup, not cleaning
[2025-04-04 01:31:00] 2025-04-04 05:30:59,774 [wrapper] apfmon messages muted
[2025-04-04 01:31:00] 2025-04-04 05:30:59,781 [wrapper] ==== wrapper stdout END ====
[2025-04-04 01:31:00] 2025-04-04 05:30:59,788 [wrapper] ==== wrapper stderr END ====
[2025-04-04 01:31:00]  *** Error codes and diagnostics ***
[2025-04-04 01:31:00]     "exeErrorCode": 0,
[2025-04-04 01:31:00]     "exeErrorDiag": "",
[2025-04-04 01:31:00]     "pilotErrorCode": 0,
[2025-04-04 01:31:00]     "pilotErrorDiag": "",
[2025-04-04 01:31:00]  *** Listing of results directory ***
[2025-04-04 01:31:00] total 422184
[2025-04-04 01:31:00] -rw-r--r--. 1 boincer umatlas    494584 Apr  3 06:39 pilot3.tar.gz
[2025-04-04 01:31:00] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 06:41 queuedata.json
[2025-04-04 01:31:00] -rwx------. 1 boincer umatlas     37140 Apr  3 06:41 runpilot2-wrapper.sh
[2025-04-04 01:31:00] -rw-r--r--. 1 boincer umatlas       100 Apr  3 14:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 01:31:00] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  3 14:18 run_atlas
[2025-04-04 01:31:00] -rw-r--r--. 1 boincer umatlas       105 Apr  3 14:18 job.xml
[2025-04-04 01:31:00] -rw-r--r--. 2 boincer umatlas 221885818 Apr  3 14:18 EVNT.44004365._000391.pool.root.1
[2025-04-04 01:31:00] -rw-r--r--. 2 boincer umatlas     17569 Apr  3 14:18 start_atlas.sh
[2025-04-04 01:31:00] drwxrwx--x. 2 boincer umatlas      4096 Apr  3 14:18 shared
[2025-04-04 01:31:00] -rw-r--r--. 2 boincer umatlas    507240 Apr  3 14:18 input.tar.gz
[2025-04-04 01:31:00] -rw-r--r--. 1 boincer umatlas         0 Apr  3 14:18 boinc_lockfile
[2025-04-04 01:31:00] -rw-r--r--. 1 boincer umatlas      2548 Apr  3 14:18 pandaJob.out
[2025-04-04 01:31:00] -rw-------. 1 boincer umatlas       467 Apr  3 14:18 setup.sh.local
[2025-04-04 01:31:00] -rw-------. 1 boincer umatlas    979944 Apr  3 14:20 agis_schedconf.cvmfs.json
[2025-04-04 01:31:00] drwx------. 4 boincer umatlas      4096 Apr  3 14:20 pilot3
[2025-04-04 01:31:00] -rw-------. 1 boincer umatlas 196063303 Apr  4 01:26 HITS.44004367._009738.pool.root.1
[2025-04-04 01:31:00] -rw-r--r--. 1 boincer umatlas       532 Apr  4 01:26 boinc_task_state.xml
[2025-04-04 01:31:00] -rw-r--r--. 1 boincer umatlas      6857 Apr  4 01:27 init_data.xml
[2025-04-04 01:31:00] -rw-------. 1 boincer umatlas      1042 Apr  4 01:29 memory_monitor_summary.json
[2025-04-04 01:31:00] -rw-------. 1 boincer umatlas   1603525 Apr  4 01:29 agis_ddmendpoints.agis.ALL.json
[2025-04-04 01:31:00] -rw-------. 1 boincer umatlas    703201 Apr  4 01:29 log.44004367._009738.job.log.tgz.1
[2025-04-04 01:31:00] -rw-------. 1 boincer umatlas        95 Apr  4 01:29 pilot_heartbeat.json
[2025-04-04 01:31:00] -rw-------. 1 boincer umatlas      7731 Apr  4 01:30 heartbeat.json
[2025-04-04 01:31:00] -rw-r--r--. 1 boincer umatlas      8192 Apr  4 01:30 boinc_mmap_file
[2025-04-04 01:31:00] -rw-r--r--. 1 boincer umatlas        29 Apr  4 01:30 wrapper_checkpoint.txt
[2025-04-04 01:31:00] -rw-------. 1 boincer umatlas      4614 Apr  4 01:30 pilotlog.txt
[2025-04-04 01:31:00] -rw-------. 1 boincer umatlas   4563502 Apr  4 01:30 log.44004367._009738.job.log.1
[2025-04-04 01:31:00] -rw-------. 1 boincer umatlas       357 Apr  4 01:31 output.list
[2025-04-04 01:31:00] -rw-r--r--. 1 boincer umatlas       620 Apr  4 01:31 runtime_log
[2025-04-04 01:31:00] -rw-------. 1 boincer umatlas   5283840 Apr  4 01:31 result.tar.gz
[2025-04-04 01:31:00] -rw-r--r--. 1 boincer umatlas     11429 Apr  4 01:31 runtime_log.err
[2025-04-04 01:31:00] -rw-------. 1 boincer umatlas       662 Apr  4 01:31 rfoLDmACXK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm26GLDmZlNfsm.diag
[2025-04-04 01:31:00] -rw-r--r--. 1 boincer umatlas     21836 Apr  4 01:31 stderr.txt
[2025-04-04 01:31:00] HITS file was successfully produced:
[2025-04-04 01:31:00] -rw-------. 1 boincer umatlas 196063303 Apr  4 01:26 shared/HITS.pool.root.1
[2025-04-04 01:31:00]  *** Contents of shared directory: ***
[2025-04-04 01:31:00] total 413844
[2025-04-04 01:31:00] -rw-r--r--. 2 boincer umatlas 221885818 Apr  3 14:18 ATLAS.root_0
[2025-04-04 01:31:00] -rw-r--r--. 2 boincer umatlas     17569 Apr  3 14:18 start_atlas.sh
[2025-04-04 01:31:00] -rw-r--r--. 2 boincer umatlas    507240 Apr  3 14:18 input.tar.gz
[2025-04-04 01:31:00] -rw-------. 1 boincer umatlas 196063303 Apr  4 01:26 HITS.pool.root.1
[2025-04-04 01:31:00] -rw-------. 1 boincer umatlas   5283840 Apr  4 01:31 result.tar.gz
01:31:22 (3763057): run_atlas exited; CPU time 113194.688984
01:31:22 (3763057): called boinc_finish(0)

</stderr_txt>
]]>

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