Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:45:11 (4056770): wrapper (7.7.26015): starting
12:45:11 (4056770): wrapper: running run_atlas (--nthreads 8)
[2025-04-03 12:45:11] Arguments: --nthreads 8
[2025-04-03 12:45:11] Threads: 8
[2025-04-03 12:45:11] Checking for CVMFS
[2025-04-03 12:45:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 12:45:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 12:45:12] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 12:45:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 12:45:13] 2.12.6.0 2445012 23500 274064 144459 0 371 26996535 32935936 24628 130560 0 10015181 99.827 3097344 26298 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-03 12:45:13] CVMFS is ok
[2025-04-03 12:45:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-03 12:45:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-03 12:45:13] Further information can be found at the LHC@home message board.
[2025-04-03 12:45:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 12:45:13] Checking for apptainer binary...
[2025-04-03 12:45:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 12:45:13] Running /usr/bin/apptainer --version
[2025-04-03 12:45:13] apptainer version 1.4.0-1.el9
[2025-04-03 12:45:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 12:45:14] c6-12-27-1.aglt2.org
[2025-04-03 12:45:14] apptainer works
[2025-04-03 12:45:14] Set ATHENA_PROC_NUMBER=8
[2025-04-03 12:45:14] Set ATHENA_CORE_NUMBER=8
[2025-04-03 12:45:15] Starting ATLAS job with PandaID=6585159978
[2025-04-03 12:45:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-03 23:28:03]  *** The last 200 lines of the pilot log: ***
[2025-04-03 23:28:03] 2025-04-04 03:27:43,197 | INFO     | extracted standard info from prmon json
[2025-04-03 23:28:03] 2025-04-04 03:27:43,198 | INFO     | extracted standard memory fields from prmon json
[2025-04-03 23:28:03] 2025-04-04 03:27:43,198 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-03 23:28:03] 2025-04-04 03:27:43,198 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-03 23:28:03] 2025-04-04 03:27:43,198 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-03 23:28:03] 2025-04-04 03:27:43,264 | INFO     | fitting pss+swap vs Time
[2025-04-03 23:28:03] 2025-04-04 03:27:43,289 | INFO     | sum of square deviations: 76800005856.10667
[2025-04-03 23:28:03] 2025-04-04 03:27:43,315 | INFO     | sum of deviations: 379073047213.05725
[2025-04-03 23:28:03] 2025-04-04 03:27:43,316 | INFO     | mean x: 1743718068.1640127
[2025-04-03 23:28:03] 2025-04-04 03:27:43,316 | INFO     | mean y: 2470515.8343949043
[2025-04-03 23:28:03] 2025-04-04 03:27:43,316 | INFO     | -- intersect: -8604254369.289286
[2025-04-03 23:28:03] 2025-04-04 03:27:43,316 | INFO     | intersect: -8604254369.289286
[2025-04-03 23:28:03] 2025-04-04 03:27:43,317 | INFO     | chi2: 8.58827628285691
[2025-04-03 23:28:03] 2025-04-04 03:27:43,318 | INFO     | sum of square deviations: 74980322173.88431
[2025-04-03 23:28:03] 2025-04-04 03:27:43,342 | INFO     | sum of deviations: 539790275236.1607
[2025-04-03 23:28:03] 2025-04-04 03:27:43,351 | INFO     | mean x: 1743717915.6693418
[2025-04-03 23:28:03] 2025-04-04 03:27:43,351 | INFO     | mean y: 2483963.903691814
[2025-04-03 23:28:03] 2025-04-04 03:27:43,351 | INFO     | -- intersect: -12550702610.176056
[2025-04-03 23:28:03] 2025-04-04 03:27:43,351 | INFO     | intersect: -12550702610.176056
[2025-04-03 23:28:03] 2025-04-04 03:27:43,352 | INFO     | chi2: 5.64501799048121
[2025-04-03 23:28:03] 2025-04-04 03:27:43,352 | INFO     | current chi2=5.64501799048121 (change=34.27065217092222 %)
[2025-04-03 23:28:03] 2025-04-04 03:27:43,353 | INFO     | sum of square deviations: 73189425637.8334
[2025-04-03 23:28:03] 2025-04-04 03:27:43,377 | INFO     | sum of deviations: 534417098388.8329
[2025-04-03 23:28:03] 2025-04-04 03:27:43,378 | INFO     | mean x: 1743717763.1666667
[2025-04-03 23:28:03] 2025-04-04 03:27:43,378 | INFO     | mean y: 2483506.409385113
[2025-04-03 23:28:03] 2025-04-04 03:27:43,378 | INFO     | -- intersect: -12729855616.072926
[2025-04-03 23:28:03] 2025-04-04 03:27:43,378 | INFO     | intersect: -12729855616.072926
[2025-04-03 23:28:03] 2025-04-04 03:27:43,388 | INFO     | chi2: 5.644705915788212
[2025-04-03 23:28:03] 2025-04-04 03:27:43,388 | INFO     | current chi2=5.644705915788212 (change=0.005528320609868244 %)
[2025-04-03 23:28:03] 2025-04-04 03:27:43,388 | INFO     | right removable region: 617
[2025-04-03 23:28:03] 2025-04-04 03:27:43,389 | INFO     | sum of square deviations: 74980067803.88435
[2025-04-03 23:28:03] 2025-04-04 03:27:43,414 | INFO     | sum of deviations: 198460521435.64252
[2025-04-03 23:28:03] 2025-04-04 03:27:43,414 | INFO     | mean x: 1743718220.6693418
[2025-04-03 23:28:03] 2025-04-04 03:27:43,414 | INFO     | mean y: 2485638.6147672553
[2025-04-03 23:28:03] 2025-04-04 03:27:43,414 | INFO     | -- intersect: -4612863979.5799055
[2025-04-03 23:28:03] 2025-04-04 03:27:43,414 | INFO     | intersect: -4612863979.5799055
[2025-04-03 23:28:03] 2025-04-04 03:27:43,415 | INFO     | chi2: 5.519155541246979
[2025-04-03 23:28:03] 2025-04-04 03:27:43,415 | INFO     | current chi2=5.519155541246979 (change=35.73616684568257 %)
[2025-04-03 23:28:03] 2025-04-04 03:27:43,424 | INFO     | sum of square deviations: 73189145164.47418
[2025-04-03 23:28:03] 2025-04-04 03:27:43,449 | INFO     | sum of deviations: 80913097255.06494
[2025-04-03 23:28:03] 2025-04-04 03:27:43,449 | INFO     | mean x: 1743718373.173139
[2025-04-03 23:28:03] 2025-04-04 03:27:43,449 | INFO     | mean y: 2495645.3171521034
[2025-04-03 23:28:03] 2025-04-04 03:27:43,449 | INFO     | -- intersect: -1925244513.376304
[2025-04-03 23:28:03] 2025-04-04 03:27:43,449 | INFO     | intersect: -1925244513.376304
[2025-04-03 23:28:03] 2025-04-04 03:27:43,450 | INFO     | chi2: 4.295057285883522
[2025-04-03 23:28:03] 2025-04-04 03:27:43,450 | INFO     | current chi2=4.295057285883522 (change=22.17908602530322 %)
[2025-04-03 23:28:03] 2025-04-04 03:27:43,450 | INFO     | left removable region: 20
[2025-04-03 23:28:03] 2025-04-04 03:27:43,451 | INFO     | sum of square deviations: 65978854719.89258
[2025-04-03 23:28:03] 2025-04-04 03:27:43,475 | INFO     | sum of deviations: 85680346484.63643
[2025-04-03 23:28:03] 2025-04-04 03:27:43,480 | INFO     | mean x: 1743718342.680067
[2025-04-03 23:28:03] 2025-04-04 03:27:43,480 | INFO     | mean y: 2522956.0871021776
[2025-04-03 23:28:03] 2025-04-04 03:27:43,480 | INFO     | -- intersect: -2261875121.247202
[2025-04-03 23:28:03] 2025-04-04 03:27:43,480 | INFO     | intersect: -2261875121.247202
[2025-04-03 23:28:03] 2025-04-04 03:27:43,481 | INFO     | chi2: 0.03524448980290962
[2025-04-03 23:28:03] 2025-04-04 03:27:43,481 | INFO     | -- intersect: -2261875121.247202
[2025-04-03 23:28:03] 2025-04-04 03:27:43,481 | INFO     | current memory leak: 1.30 B/s (using 597 data points, chi2=0.04)
[2025-04-03 23:28:03] 2025-04-04 03:27:43,482 | INFO     | ..............................
[2025-04-03 23:28:03] 2025-04-04 03:27:43,482 | INFO     | . Timing measurements:
[2025-04-03 23:28:03] 2025-04-04 03:27:43,482 | INFO     | . get job = 0 s
[2025-04-03 23:28:03] 2025-04-04 03:27:43,482 | INFO     | . initial setup = 8 s
[2025-04-03 23:28:03] 2025-04-04 03:27:43,482 | INFO     | . payload setup = 47 s
[2025-04-03 23:28:03] 2025-04-04 03:27:43,483 | INFO     | . stage-in = 0 s
[2025-04-03 23:28:03] 2025-04-04 03:27:43,483 | INFO     | . payload execution = 38298 s
[2025-04-03 23:28:03] 2025-04-04 03:27:43,483 | INFO     | . stage-out = 10 s
[2025-04-03 23:28:03] 2025-04-04 03:27:43,483 | INFO     | . log creation = 2 s
[2025-04-03 23:28:03] 2025-04-04 03:27:43,483 | INFO     | ..............................
[2025-04-03 23:28:03] 2025-04-04 03:27:43,820 | INFO     | 
[2025-04-03 23:28:03] 2025-04-04 03:27:43,820 | INFO     | job summary report
[2025-04-03 23:28:03] 2025-04-04 03:27:43,820 | INFO     | --------------------------------------------------
[2025-04-03 23:28:03] 2025-04-04 03:27:43,820 | INFO     | PanDA job id: 6585159978
[2025-04-03 23:28:03] 2025-04-04 03:27:43,820 | INFO     | task id: 43634898
[2025-04-03 23:28:03] 2025-04-04 03:27:43,820 | INFO     | errors: (none)
[2025-04-03 23:28:03] 2025-04-04 03:27:43,821 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-03 23:28:03] 2025-04-04 03:27:43,821 | INFO     | pilot state: finished 
[2025-04-03 23:28:03] 2025-04-04 03:27:43,821 | INFO     | transexitcode: 0
[2025-04-03 23:28:03] 2025-04-04 03:27:43,821 | INFO     | exeerrorcode: 0
[2025-04-03 23:28:03] 2025-04-04 03:27:43,821 | INFO     | exeerrordiag: 
[2025-04-03 23:28:03] 2025-04-04 03:27:43,821 | INFO     | exitcode: 0
[2025-04-03 23:28:03] 2025-04-04 03:27:43,821 | INFO     | exitmsg: OK
[2025-04-03 23:28:03] 2025-04-04 03:27:43,821 | INFO     | cpuconsumptiontime: 82339 s
[2025-04-03 23:28:03] 2025-04-04 03:27:43,821 | INFO     | nevents: 400
[2025-04-03 23:28:03] 2025-04-04 03:27:43,821 | INFO     | neventsw: 0
[2025-04-03 23:28:03] 2025-04-04 03:27:43,821 | INFO     | pid: 4086946
[2025-04-03 23:28:03] 2025-04-04 03:27:43,821 | INFO     | pgrp: 4086946
[2025-04-03 23:28:03] 2025-04-04 03:27:43,821 | INFO     | corecount: 8
[2025-04-03 23:28:03] 2025-04-04 03:27:43,822 | INFO     | event service: False
[2025-04-03 23:28:03] 2025-04-04 03:27:43,822 | INFO     | sizes: {0: 2416521, 1: 2417206, 2: 2417206, 3: 2417433, 4: 2417433, 15: 2417461, 26: 2417617, 37: 2417851, 38: 2417879, 38350: 2458856, 38363: 2467797, 38366: 2468
[2025-04-03 23:28:03] 2025-04-04 03:27:43,822 | INFO     | --------------------------------------------------
[2025-04-03 23:28:03] 2025-04-04 03:27:43,822 | INFO     | 
[2025-04-03 23:28:03] 2025-04-04 03:27:43,822 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-04-03 23:28:03] 2025-04-04 03:27:43,879 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,879 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,879 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,879 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,879 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,879 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,880 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,880 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,880 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,880 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,880 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,880 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,880 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-03 23:28:03] 2025-04-04 03:27:43,880 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,881 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-03 23:28:03] 2025-04-04 03:27:43,881 | INFO     | job 6585159978 has completed (purged errors)
[2025-04-03 23:28:03] 2025-04-04 03:27:43,881 | INFO     | overall cleanup function is called
[2025-04-03 23:28:03] 2025-04-04 03:27:44,895 | INFO     | --- collectZombieJob: --- 10, [4086946]
[2025-04-03 23:28:03] 2025-04-04 03:27:44,895 | INFO     | zombie collector waiting for pid 4086946
[2025-04-03 23:28:03] 2025-04-04 03:27:44,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-03 23:28:03] 2025-04-04 03:27:44,895 | INFO     | collected zombie processes
[2025-04-03 23:28:03] 2025-04-04 03:27:44,895 | INFO     | will attempt to kill all subprocesses of pid=4086946
[2025-04-03 23:28:03] 2025-04-04 03:27:47,862 | INFO     | process IDs to be killed: [4086946] (in reverse order)
[2025-04-03 23:28:03] 2025-04-04 03:27:48,666 | WARNING  | found no corresponding commands to process id(s)
[2025-04-03 23:28:03] 2025-04-04 03:27:48,666 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-03 23:28:03] 2025-04-04 03:27:48,734 | INFO     | did not find any defunct processes belonging to 4086946
[2025-04-03 23:28:03] 2025-04-04 03:27:48,806 | INFO     | did not find any defunct processes belonging to 4086946
[2025-04-03 23:28:03] 2025-04-04 03:27:48,822 | INFO     | ready for new job
[2025-04-03 23:28:03] 2025-04-04 03:27:48,822 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-03 23:28:03] 2025-04-04 03:27:48,824 | INFO     | **************************************
[2025-04-03 23:28:03] 2025-04-04 03:27:48,824 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-03 23:28:03] 2025-04-04 03:27:48,824 | INFO     | **************************************
[2025-04-03 23:28:03] 2025-04-04 03:27:48,824 | INFO     | 
[2025-04-03 23:28:03] 2025-04-04 03:27:48,864 | INFO     | architecture information:
[2025-04-03 23:28:03] 2025-04-04 03:27:48,874 | INFO     | executing command: cat /etc/os-release
[2025-04-03 23:28:03] 2025-04-04 03:27:49,150 | INFO     | cat /etc/os-release:
[2025-04-03 23:28:03] NAME="CentOS Linux"
[2025-04-03 23:28:03] VERSION="7 (Core)"
[2025-04-03 23:28:03] ID="centos"
[2025-04-03 23:28:03] ID_LIKE="rhel fedora"
[2025-04-03 23:28:03] VERSION_ID="7"
[2025-04-03 23:28:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-03 23:28:03] ANSI_COLOR="0;31"
[2025-04-03 23:28:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-03 23:28:03] HOME_URL="https://www.centos.org/"
[2025-04-03 23:28:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-03 23:28:03] 
[2025-04-03 23:28:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-03 23:28:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-03 23:28:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-03 23:28:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-03 23:28:03] 
[2025-04-03 23:28:03] 2025-04-04 03:27:49,150 | INFO     | **************************************
[2025-04-03 23:28:03] 2025-04-04 03:27:49,677 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-04-03 23:28:03] 2025-04-04 03:27:49,788 | INFO     | sufficient remaining disk space (92005203968 B)
[2025-04-03 23:28:03] 2025-04-04 03:27:49,788 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-03 23:28:03] 2025-04-04 03:27:49,788 | INFO     | current server update state: UPDATING_FINAL
[2025-04-03 23:28:03] 2025-04-04 03:27:49,788 | INFO     | update_server=False
[2025-04-03 23:28:03] 2025-04-04 03:27:49,789 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-03 23:28:03] 2025-04-04 03:27:49,789 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-03 23:28:03] 2025-04-04 03:27:49,790 | INFO     | aborting loop
[2025-04-03 23:28:03] 2025-04-04 03:27:49,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-03 23:28:03] 2025-04-04 03:27:50,384 | INFO     | all payload control threads have been joined
[2025-04-03 23:28:03] 2025-04-04 03:27:50,453 | INFO     | all data control threads have been joined
[2025-04-03 23:28:03] 2025-04-04 03:27:50,821 | INFO     | [job] retrieve thread has finished
[2025-04-03 23:28:03] 2025-04-04 03:27:50,821 | INFO     | [job] job monitor thread has finished
[2025-04-03 23:28:03] 2025-04-04 03:27:50,821 | INFO     | [job] queue monitor thread has finished
[2025-04-03 23:28:03] 2025-04-04 03:27:51,167 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-03 23:28:03] 2025-04-04 03:27:51,378 | INFO     | all job control threads have been joined
[2025-04-03 23:28:03] 2025-04-04 03:27:51,402 | INFO     | [payload] control thread has finished
[2025-04-03 23:28:03] 2025-04-04 03:27:51,405 | INFO     | [job] create_data_payload thread has finished
[2025-04-03 23:28:03] 2025-04-04 03:27:51,451 | INFO     | [data] copytool_in thread has finished
[2025-04-03 23:28:03] 2025-04-04 03:27:51,456 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-03 23:28:03] 2025-04-04 03:27:51,460 | INFO     | [payload] validate_pre thread has finished
[2025-04-03 23:28:03] 2025-04-04 03:27:51,460 | INFO     | [data] control thread has finished
[2025-04-03 23:28:03] 2025-04-04 03:27:51,668 | INFO     | [payload] execute_payloads thread has finished
[2025-04-03 23:28:03] 2025-04-04 03:27:51,830 | INFO     | [job] validate thread has finished
[2025-04-03 23:28:03] 2025-04-04 03:27:51,863 | INFO     | [payload] failed_post thread has finished
[2025-04-03 23:28:03] 2025-04-04 03:27:52,291 | INFO     | [payload] validate_post thread has finished
[2025-04-03 23:28:03] 2025-04-04 03:27:52,298 | INFO     | PID=4063504 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-03 23:28:03] 2025-04-04 03:27:52,298 | INFO     | .. there are 25 such processes running
[2025-04-03 23:28:03] 2025-04-04 03:27:52,319 | INFO     | found 0 job(s) in 20 queues
[2025-04-03 23:28:03] 2025-04-04 03:27:52,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-03 23:28:03] 2025-04-04 03:27:52,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-03 23:28:03] 2025-04-04 03:27:52,385 | INFO     | [job] control thread has finished
[2025-04-03 23:28:03] 2025-04-04 03:27:52,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-03 23:28:03] 2025-04-04 03:27:53,181 | INFO     | [data] copytool_out thread has finished
[2025-04-03 23:28:03] 2025-04-04 03:27:56,596 | INFO     | [data] queue_monitor thread has finished
[2025-04-03 23:28:03] 2025-04-04 03:27:56,846 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139702333237056)>', '<ExcThread(monitor, started 139701218420480)>']
[2025-04-03 23:28:03] 2025-04-04 03:27:57,348 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-03 23:28:03] 2025-04-04 03:27:57,349 | INFO     | [monitor] control thread has ended
[2025-04-03 23:28:03] 2025-04-04 03:28:01,885 | INFO     | all workflow threads have been joined
[2025-04-03 23:28:03] 2025-04-04 03:28:01,886 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-03 23:28:03] 2025-04-04 03:28:01,886 | INFO     | traces error code: 0
[2025-04-03 23:28:03] 2025-04-04 03:28:01,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-03 23:28:03] 2025-04-04 03:28:03,050 [wrapper] ==== pilot stdout END ====
[2025-04-03 23:28:03] 2025-04-04 03:28:03,070 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-03 23:28:03] 2025-04-04 03:28:03,085 [wrapper] pilotpid: 4063504
[2025-04-03 23:28:03] 2025-04-04 03:28:03,117 [wrapper] Pilot exit status: 0
[2025-04-03 23:28:03] 2025-04-04 03:28:03,363 [wrapper] pandaids: 6585159978
[2025-04-03 23:28:03] 2025-04-04 03:28:03,500 [wrapper] cleanup supervisor_pilot 3302985 4063505
[2025-04-03 23:28:03] 2025-04-04 03:28:03,515 [wrapper] Test setup, not cleaning
[2025-04-03 23:28:03] 2025-04-04 03:28:03,533 [wrapper] apfmon messages muted
[2025-04-03 23:28:03] 2025-04-04 03:28:03,570 [wrapper] ==== wrapper stdout END ====
[2025-04-03 23:28:03] 2025-04-04 03:28:03,620 [wrapper] ==== wrapper stderr END ====
[2025-04-03 23:28:03]  *** Error codes and diagnostics ***
[2025-04-03 23:28:03]     "exeErrorCode": 0,
[2025-04-03 23:28:03]     "exeErrorDiag": "",
[2025-04-03 23:28:03]     "pilotErrorCode": 0,
[2025-04-03 23:28:03]     "pilotErrorDiag": "",
[2025-04-03 23:28:03]  *** Listing of results directory ***
[2025-04-03 23:28:03] total 680636
[2025-04-03 23:28:03] -rw-r--r--. 1 boincer umatlas    495897 Apr  3 08:41 pilot3.tar.gz
[2025-04-03 23:28:03] -rw-r--r--. 1 boincer umatlas      5111 Apr  3 08:48 queuedata.json
[2025-04-03 23:28:03] -rwx------. 1 boincer umatlas     37140 Apr  3 08:49 runpilot2-wrapper.sh
[2025-04-03 23:28:03] -rw-r--r--. 1 boincer umatlas       100 Apr  3 12:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-03 23:28:03] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  3 12:45 run_atlas
[2025-04-03 23:28:03] -rw-r--r--. 1 boincer umatlas       105 Apr  3 12:45 job.xml
[2025-04-03 23:28:03] -rw-r--r--. 2 boincer umatlas 359571386 Apr  3 12:45 EVNT.43634896._000561.pool.root.1
[2025-04-03 23:28:03] -rw-r--r--. 2 boincer umatlas     17569 Apr  3 12:45 start_atlas.sh
[2025-04-03 23:28:03] drwxrwx--x. 2 boincer umatlas      4096 Apr  3 12:45 shared
[2025-04-03 23:28:03] -rw-r--r--. 2 boincer umatlas    508888 Apr  3 12:45 input.tar.gz
[2025-04-03 23:28:03] -rw-r--r--. 1 boincer umatlas         0 Apr  3 12:45 boinc_lockfile
[2025-04-03 23:28:03] -rw-r--r--. 1 boincer umatlas      2599 Apr  3 12:45 pandaJob.out
[2025-04-03 23:28:03] -rw-------. 1 boincer umatlas       467 Apr  3 12:45 setup.sh.local
[2025-04-03 23:28:03] -rw-------. 1 boincer umatlas    979671 Apr  3 12:46 agis_schedconf.cvmfs.json
[2025-04-03 23:28:03] drwx------. 4 boincer umatlas      4096 Apr  3 12:46 pilot3
[2025-04-03 23:28:03] -rw-r--r--. 1 boincer umatlas      6859 Apr  3 23:20 init_data.xml
[2025-04-03 23:28:03] -rw-------. 1 boincer umatlas 326513022 Apr  3 23:22 HITS.43634898._014522.pool.root.1
[2025-04-03 23:28:03] -rw-r--r--. 1 boincer umatlas       532 Apr  3 23:23 boinc_task_state.xml
[2025-04-03 23:28:03] -rw-------. 1 boincer umatlas      1059 Apr  3 23:26 memory_monitor_summary.json
[2025-04-03 23:28:03] -rw-------. 1 boincer umatlas   1603525 Apr  3 23:26 agis_ddmendpoints.agis.ALL.json
[2025-04-03 23:28:03] -rw-------. 1 boincer umatlas    600689 Apr  3 23:27 log.43634898._014522.job.log.tgz.1
[2025-04-03 23:28:03] -rw-------. 1 boincer umatlas        95 Apr  3 23:27 pilot_heartbeat.json
[2025-04-03 23:28:03] -rw-------. 1 boincer umatlas      7755 Apr  3 23:27 heartbeat.json
[2025-04-03 23:28:03] -rw-------. 1 boincer umatlas      4748 Apr  3 23:28 pilotlog.txt
[2025-04-03 23:28:03] -rw-r--r--. 1 boincer umatlas      8192 Apr  3 23:28 boinc_mmap_file
[2025-04-03 23:28:03] -rw-------. 1 boincer umatlas   2923465 Apr  3 23:28 log.43634898._014522.job.log.1
[2025-04-03 23:28:03] -rw-r--r--. 1 boincer umatlas        28 Apr  3 23:28 wrapper_checkpoint.txt
[2025-04-03 23:28:03] -rw-------. 1 boincer umatlas       357 Apr  3 23:28 output.list
[2025-04-03 23:28:03] -rw-r--r--. 1 boincer umatlas       620 Apr  3 23:28 runtime_log
[2025-04-03 23:28:03] -rw-------. 1 boincer umatlas   3543040 Apr  3 23:28 result.tar.gz
[2025-04-03 23:28:03] -rw-r--r--. 1 boincer umatlas     11429 Apr  3 23:28 runtime_log.err
[2025-04-03 23:28:03] -rw-------. 1 boincer umatlas       666 Apr  3 23:28 lqRKDmHCZK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmjIHLDmgU2eZn.diag
[2025-04-03 23:28:03] -rw-r--r--. 1 boincer umatlas     21001 Apr  3 23:28 stderr.txt
[2025-04-03 23:28:03] HITS file was successfully produced:
[2025-04-03 23:28:03] -rw-------. 1 boincer umatlas 326513022 Apr  3 23:22 shared/HITS.pool.root.1
[2025-04-03 23:28:03]  *** Contents of shared directory: ***
[2025-04-03 23:28:03] total 673996
[2025-04-03 23:28:03] -rw-r--r--. 2 boincer umatlas 359571386 Apr  3 12:45 ATLAS.root_0
[2025-04-03 23:28:03] -rw-r--r--. 2 boincer umatlas     17569 Apr  3 12:45 start_atlas.sh
[2025-04-03 23:28:03] -rw-r--r--. 2 boincer umatlas    508888 Apr  3 12:45 input.tar.gz
[2025-04-03 23:28:03] -rw-------. 1 boincer umatlas 326513022 Apr  3 23:22 HITS.pool.root.1
[2025-04-03 23:28:03] -rw-------. 1 boincer umatlas   3543040 Apr  3 23:28 result.tar.gz
23:28:05 (4056770): run_atlas exited; CPU time 83955.193721
23:28:05 (4056770): called boinc_finish(0)

</stderr_txt>
]]>

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