Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
19:03:23 (2473492): wrapper (7.7.26015): starting
19:03:23 (2473492): wrapper: running run_atlas (--nthreads 4)
[2025-04-03 19:03:23] Arguments: --nthreads 4
[2025-04-03 19:03:23] Threads: 4
[2025-04-03 19:03:23] Checking for CVMFS
[2025-04-03 19:03:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 19:03:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 19:03:23] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 19:03:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 19:03:23] 2.12.7.0 2558 1132 119652 144459 0 186 2525445 4096001 6403 130560 0 9376514 99.999 227768 5809 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-03 19:03:23] CVMFS is ok
[2025-04-03 19:03:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-03 19:03:23] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-03 19:03:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-03 19:03:23] Further information can be found at the LHC@home message board.
[2025-04-03 19:03:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 19:03:23] Checking for apptainer binary...
[2025-04-03 19:03:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 19:03:23] Running /usr/bin/apptainer --version
[2025-04-03 19:03:23] apptainer version 1.2.3
[2025-04-03 19:03:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 19:03:24] Ryzen-9-7950X3D-Zen4-Deb12
[2025-04-03 19:03:24] apptainer works
[2025-04-03 19:03:24] Set ATHENA_PROC_NUMBER=4
[2025-04-03 19:03:24] Set ATHENA_CORE_NUMBER=4
[2025-04-03 19:03:24] Starting ATLAS job with PandaID=6584884937
[2025-04-03 19:03:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-03 20:29:32]  *** The last 200 lines of the pilot log: ***
[2025-04-03 20:29:32]  is_altstaged=None
[2025-04-03 20:29:32]  is_tar=False
[2025-04-03 20:29:32]  lfn=log.44004367._000270.job.log.tgz.1
[2025-04-03 20:29:32]  mtime=0
[2025-04-03 20:29:32]  protocol_id=None
[2025-04-03 20:29:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-03 20:29:32]  replicas=None
[2025-04-03 20:29:32]  scope=mc23_13p6TeV
[2025-04-03 20:29:32]  status=None
[2025-04-03 20:29:32]  status_code=0
[2025-04-03 20:29:32]  storage_token=
[2025-04-03 20:29:32]  surl=/var/lib/boinc-client/slots/7/PanDA_Pilot-6584884937/log.44004367._000270.job.log.tgz.1
[2025-04-03 20:29:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/09/log.44004367._000270.job.log.tgz.1
[2025-04-03 20:29:32]  workdir=None
[2025-04-03 20:29:32] ]
[2025-04-03 20:29:32] 2025-04-03 18:29:06,088 | INFO     | transferring file log.44004367._000270.job.log.tgz.1 from /var/lib/boinc-client/slots/7/PanDA_Pilot-6584884937/log.44004367._000270.job.log.tgz.1 to /var/lib/boinc
[2025-04-03 20:29:32] 2025-04-03 18:29:06,088 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/7/PanDA_Pilot-6584884937/log.44004367._000270.job.log.tgz.1 /var/lib/boinc-client/slots/7/log.440043
[2025-04-03 20:29:32] 2025-04-03 18:29:06,099 | INFO     | adding to output.list: log.44004367._000270.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b5/09/log.44004367._000270.job.log.tg
[2025-04-03 20:29:32] 2025-04-03 18:29:06,099 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-03 20:29:32] 2025-04-03 18:29:06,099 | INFO     | summary of transferred files:
[2025-04-03 20:29:32] 2025-04-03 18:29:06,099 | INFO     |  -- lfn=log.44004367._000270.job.log.tgz.1, status_code=0, status=transferred
[2025-04-03 20:29:32] 2025-04-03 18:29:06,099 | INFO     | stage-out finished correctly
[2025-04-03 20:29:32] 2025-04-03 18:29:06,611 | WARNING  | process 2483987 can no longer be monitored (due to stat problems) - aborting
[2025-04-03 20:29:32] 2025-04-03 18:29:06,612 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6584884937/memory_monitor_summary.json (trf name=prmon)
[2025-04-03 20:29:32] 2025-04-03 18:29:06,649 | INFO     | number of running child processes to parent process 2483987: 1
[2025-04-03 20:29:32] 2025-04-03 18:29:06,649 | INFO     | maximum number of monitored processes: 6
[2025-04-03 20:29:32] 2025-04-03 18:29:08,159 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-03 20:29:32] 2025-04-03 18:29:09,152 | INFO     | monitor loop #385: job 0:6584884937 is in state 'finished'
[2025-04-03 20:29:32] 2025-04-03 18:29:09,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-03 20:29:32] 2025-04-03 18:29:09,156 | INFO     | job 6584884937 has state=finished
[2025-04-03 20:29:32] 2025-04-03 18:29:09,156 | INFO     | preparing for final server update for job 6584884937 in state='finished'
[2025-04-03 20:29:32] 2025-04-03 18:29:09,157 | INFO     | this job has now completed (state=finished)
[2025-04-03 20:29:32] 2025-04-03 18:29:09,157 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-03 20:29:32] 2025-04-03 18:29:09,157 | INFO     | log transfer has been attempted: DONE
[2025-04-03 20:29:32] 2025-04-03 18:29:09,157 | INFO     | job 6584884937 has finished - writing final server update
[2025-04-03 20:29:32] 2025-04-03 18:29:09,157 | INFO     | total number of processed events: 400 (read)
[2025-04-03 20:29:32] 2025-04-03 18:29:09,159 | INFO     | executing command: lscpu
[2025-04-03 20:29:32] 2025-04-03 18:29:09,181 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-03 20:29:32] 2025-04-03 18:29:11,655 | INFO     | monitor loop #386: job 0:6584884937 is in state 'finished'
[2025-04-03 20:29:32] 2025-04-03 18:29:11,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-03 20:29:32] 2025-04-03 18:29:13,380 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-03 20:29:32] 2025-04-03 18:29:13,380 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6584884937/memory_monitor_summary.json (trf name=prmon)
[2025-04-03 20:29:32] 2025-04-03 18:29:13,380 | INFO     | extracted standard info from prmon json
[2025-04-03 20:29:32] 2025-04-03 18:29:13,380 | INFO     | extracted standard memory fields from prmon json
[2025-04-03 20:29:32] 2025-04-03 18:29:13,380 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-03 20:29:32] 2025-04-03 18:29:13,380 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-03 20:29:32] 2025-04-03 18:29:13,380 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-03 20:29:32] 2025-04-03 18:29:13,381 | INFO     | fitting pss+swap vs Time
[2025-04-03 20:29:32] 2025-04-03 18:29:13,381 | INFO     | model: linear, x: [1743700132.0, 1743700193.0, 1743700254.0, 1743700315.0, 1743700376.0, 1743700437.0, 1743700498.0, 1743700559.0, 1743700620.0, 1743700681.0, 1743
[2025-04-03 20:29:32] 2025-04-03 18:29:13,381 | INFO     | sum of square deviations: 141539398.0
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | sum of deviations: 14344553881.0
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | mean x: 1743702450.0
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | mean y: 2248537.3896103897
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | -- intersect: -176716277186.85223
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | intersect: -176716277186.85223
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | chi2: 1.3462322721678703
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | -- intersect: -176716277186.85223
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | current memory leak: 101.35 B/s (using 77 data points, chi2=1.35)
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | ..............................
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | . Timing measurements:
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | . get job = 0 s
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | . initial setup = 1 s
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | . payload setup = 2 s
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | . stage-in = 0 s
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | . payload execution = 5117 s
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | . stage-out = 0 s
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | . log creation = 0 s
[2025-04-03 20:29:32] 2025-04-03 18:29:13,382 | INFO     | ..............................
[2025-04-03 20:29:32] 2025-04-03 18:29:13,410 | INFO     | 
[2025-04-03 20:29:32] 2025-04-03 18:29:13,410 | INFO     | job summary report
[2025-04-03 20:29:32] 2025-04-03 18:29:13,410 | INFO     | --------------------------------------------------
[2025-04-03 20:29:32] 2025-04-03 18:29:13,410 | INFO     | PanDA job id: 6584884937
[2025-04-03 20:29:32] 2025-04-03 18:29:13,410 | INFO     | task id: 44004367
[2025-04-03 20:29:32] 2025-04-03 18:29:13,410 | INFO     | errors: (none)
[2025-04-03 20:29:32] 2025-04-03 18:29:13,410 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-03 20:29:32] 2025-04-03 18:29:13,410 | INFO     | pilot state: finished 
[2025-04-03 20:29:32] 2025-04-03 18:29:13,410 | INFO     | transexitcode: 0
[2025-04-03 20:29:32] 2025-04-03 18:29:13,410 | INFO     | exeerrorcode: 0
[2025-04-03 20:29:32] 2025-04-03 18:29:13,410 | INFO     | exeerrordiag: 
[2025-04-03 20:29:32] 2025-04-03 18:29:13,410 | INFO     | exitcode: 0
[2025-04-03 20:29:32] 2025-04-03 18:29:13,410 | INFO     | exitmsg: OK
[2025-04-03 20:29:32] 2025-04-03 18:29:13,411 | INFO     | cpuconsumptiontime: 17877 s
[2025-04-03 20:29:32] 2025-04-03 18:29:13,411 | INFO     | nevents: 400
[2025-04-03 20:29:32] 2025-04-03 18:29:13,411 | INFO     | neventsw: 0
[2025-04-03 20:29:32] 2025-04-03 18:29:13,411 | INFO     | pid: 2483987
[2025-04-03 20:29:32] 2025-04-03 18:29:13,411 | INFO     | pgrp: 2483987
[2025-04-03 20:29:32] 2025-04-03 18:29:13,411 | INFO     | corecount: 4
[2025-04-03 20:29:32] 2025-04-03 18:29:13,411 | INFO     | event service: False
[2025-04-03 20:29:32] 2025-04-03 18:29:13,411 | INFO     | sizes: {0: 2417325, 2: 2417531, 11: 2417559, 5123: 2443885, 5124: 2452840, 5126: 2452896, 5131: 2453194}
[2025-04-03 20:29:32] 2025-04-03 18:29:13,411 | INFO     | --------------------------------------------------
[2025-04-03 20:29:32] 2025-04-03 18:29:13,411 | INFO     | 
[2025-04-03 20:29:32] 2025-04-03 18:29:13,411 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2025-04-03 20:29:32] 2025-04-03 18:29:13,423 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,423 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,423 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,423 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,423 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,423 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,423 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,423 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,423 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,423 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,423 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,423 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,423 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,424 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,424 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,424 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-03 20:29:32] 2025-04-03 18:29:13,424 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,424 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-03 20:29:32] 2025-04-03 18:29:13,424 | INFO     | job 6584884937 has completed (purged errors)
[2025-04-03 20:29:32] 2025-04-03 18:29:13,424 | INFO     | overall cleanup function is called
[2025-04-03 20:29:32] 2025-04-03 18:29:14,428 | INFO     | --- collectZombieJob: --- 10, [2483987]
[2025-04-03 20:29:32] 2025-04-03 18:29:14,428 | INFO     | zombie collector waiting for pid 2483987
[2025-04-03 20:29:32] 2025-04-03 18:29:14,428 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-03 20:29:32] 2025-04-03 18:29:14,428 | INFO     | collected zombie processes
[2025-04-03 20:29:32] 2025-04-03 18:29:14,429 | INFO     | will attempt to kill all subprocesses of pid=2483987
[2025-04-03 20:29:32] 2025-04-03 18:29:14,469 | INFO     | process IDs to be killed: [2483987] (in reverse order)
[2025-04-03 20:29:32] 2025-04-03 18:29:14,507 | WARNING  | found no corresponding commands to process id(s)
[2025-04-03 20:29:32] 2025-04-03 18:29:14,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-03 20:29:32] 2025-04-03 18:29:14,509 | INFO     | did not find any defunct processes belonging to 2483987
[2025-04-03 20:29:32] 2025-04-03 18:29:14,510 | INFO     | did not find any defunct processes belonging to 2483987
[2025-04-03 20:29:32] 2025-04-03 18:29:14,511 | INFO     | ready for new job
[2025-04-03 20:29:32] 2025-04-03 18:29:14,511 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-03 20:29:32] 2025-04-03 18:29:14,511 | INFO     | ***************************************
[2025-04-03 20:29:32] 2025-04-03 18:29:14,511 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-03 20:29:32] 2025-04-03 18:29:14,511 | INFO     | ***************************************
[2025-04-03 20:29:32] 2025-04-03 18:29:14,511 | INFO     | 
[2025-04-03 20:29:32] 2025-04-03 18:29:14,512 | INFO     | architecture information:
[2025-04-03 20:29:32] 2025-04-03 18:29:14,513 | INFO     | executing command: cat /etc/os-release
[2025-04-03 20:29:32] 2025-04-03 18:29:14,521 | INFO     | cat /etc/os-release:
[2025-04-03 20:29:32] NAME="CentOS Linux"
[2025-04-03 20:29:32] VERSION="7 (Core)"
[2025-04-03 20:29:32] ID="centos"
[2025-04-03 20:29:32] ID_LIKE="rhel fedora"
[2025-04-03 20:29:32] VERSION_ID="7"
[2025-04-03 20:29:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-03 20:29:32] ANSI_COLOR="0;31"
[2025-04-03 20:29:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-03 20:29:32] HOME_URL="https://www.centos.org/"
[2025-04-03 20:29:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-03 20:29:32] 
[2025-04-03 20:29:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-03 20:29:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-03 20:29:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-03 20:29:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-03 20:29:32] 
[2025-04-03 20:29:32] 2025-04-03 18:29:14,522 | INFO     | ***************************************
[2025-04-03 20:29:32] 2025-04-03 18:29:15,024 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2025-04-03 20:29:32] 2025-04-03 18:29:15,036 | INFO     | sufficient remaining disk space (1762381529088 B)
[2025-04-03 20:29:32] 2025-04-03 18:29:15,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-03 20:29:32] 2025-04-03 18:29:15,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-03 20:29:32] 2025-04-03 18:29:15,036 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-03 20:29:32] 2025-04-03 18:29:15,037 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-03 20:29:32] 2025-04-03 18:29:15,037 | INFO     | found 0 job(s) in 20 queues
[2025-04-03 20:29:32] 2025-04-03 18:29:15,037 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-03 20:29:32] 2025-04-03 18:29:15,037 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-03 20:29:32] 2025-04-03 18:29:15,037 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-03 20:29:32] 2025-04-03 18:29:15,037 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-03 20:29:32] 2025-04-03 18:29:15,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-03 20:29:32] 2025-04-03 18:29:15,160 | INFO     | aborting loop
[2025-04-03 20:29:32] 2025-04-03 18:29:15,440 | INFO     | all payload control threads have been joined
[2025-04-03 20:29:32] 2025-04-03 18:29:15,940 | INFO     | all data control threads have been joined
[2025-04-03 20:29:32] 2025-04-03 18:29:16,040 | INFO     | [job] queue monitor thread has finished
[2025-04-03 20:29:32] 2025-04-03 18:29:16,041 | INFO     | [job] retrieve thread has finished
[2025-04-03 20:29:32] 2025-04-03 18:29:16,164 | INFO     | [job] job monitor thread has finished
[2025-04-03 20:29:32] 2025-04-03 18:29:16,180 | INFO     | [data] copytool_in thread has finished
[2025-04-03 20:29:32] 2025-04-03 18:29:16,444 | INFO     | [payload] control thread has finished
[2025-04-03 20:29:32] 2025-04-03 18:29:16,476 | INFO     | [payload] failed_post thread has finished
[2025-04-03 20:29:32] 2025-04-03 18:29:16,598 | INFO     | [payload] execute_payloads thread has finished
[2025-04-03 20:29:32] 2025-04-03 18:29:16,644 | INFO     | all job control threads have been joined
[2025-04-03 20:29:32] 2025-04-03 18:29:16,944 | INFO     | [data] control thread has finished
[2025-04-03 20:29:32] 2025-04-03 18:29:17,042 | INFO     | [data] copytool_out thread has finished
[2025-04-03 20:29:32] 2025-04-03 18:29:17,244 | INFO     | [job] validate thread has finished
[2025-04-03 20:29:32] 2025-04-03 18:29:17,248 | INFO     | [job] create_data_payload thread has finished
[2025-04-03 20:29:32] 2025-04-03 18:29:17,344 | INFO     | [payload] validate_post thread has finished
[2025-04-03 20:29:32] 2025-04-03 18:29:17,380 | INFO     | [payload] validate_pre thread has finished
[2025-04-03 20:29:32] 2025-04-03 18:29:17,648 | INFO     | [job] control thread has finished
[2025-04-03 20:29:32] 2025-04-03 18:29:19,043 | INFO     | [data] queue_monitor thread has finished
[2025-04-03 20:29:32] 2025-04-03 18:29:26,032 | INFO     | job.realtimelogging is not enabled
[2025-04-03 20:29:32] 2025-04-03 18:29:27,036 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-03 20:29:32] 2025-04-03 18:29:27,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747776268096)>', '<ExcThread(monitor, started 139746986665728)>']
[2025-04-03 20:29:32] 2025-04-03 18:29:28,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-03 20:29:32] 2025-04-03 18:29:28,097 | INFO     | [monitor] control thread has ended
[2025-04-03 20:29:32] 2025-04-03 18:29:32,148 | INFO     | all workflow threads have been joined
[2025-04-03 20:29:32] 2025-04-03 18:29:32,148 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-03 20:29:32] 2025-04-03 18:29:32,148 | INFO     | traces error code: 0
[2025-04-03 20:29:32] 2025-04-03 18:29:32,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-03 20:29:32] 2025-04-03 18:29:32,195 [wrapper] ==== pilot stdout END ====
[2025-04-03 20:29:32] 2025-04-03 18:29:32,197 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-03 20:29:32] 2025-04-03 18:29:32,198 [wrapper] pilotpid: 2477286
[2025-04-03 20:29:32] 2025-04-03 18:29:32,199 [wrapper] Pilot exit status: 0
[2025-04-03 20:29:32] 2025-04-03 18:29:32,205 [wrapper] pandaids: 6584884937
[2025-04-03 20:29:32] 2025-04-03 18:29:32,225 [wrapper] cleanup supervisor_pilot 2651344 2477287
[2025-04-03 20:29:32] 2025-04-03 18:29:32,227 [wrapper] Test setup, not cleaning
[2025-04-03 20:29:32] 2025-04-03 18:29:32,228 [wrapper] apfmon messages muted
[2025-04-03 20:29:32] 2025-04-03 18:29:32,229 [wrapper] ==== wrapper stdout END ====
[2025-04-03 20:29:32] 2025-04-03 18:29:32,230 [wrapper] ==== wrapper stderr END ====
[2025-04-03 20:29:32]  *** Error codes and diagnostics ***
[2025-04-03 20:29:32]     "exeErrorCode": 0,
[2025-04-03 20:29:32]     "exeErrorDiag": "",
[2025-04-03 20:29:32]     "pilotErrorCode": 0,
[2025-04-03 20:29:32]     "pilotErrorDiag": "",
[2025-04-03 20:29:32]  *** Listing of results directory ***
[2025-04-03 20:29:32] total 420608
[2025-04-03 20:29:32] -rw-r--r-- 1 boinc boinc    494584 Apr  2 15:18 pilot3.tar.gz
[2025-04-03 20:29:32] -rw-r--r-- 1 boinc boinc      5112 Apr  2 15:21 queuedata.json
[2025-04-03 20:29:32] -rwx------ 1 boinc boinc     37140 Apr  2 15:21 runpilot2-wrapper.sh
[2025-04-03 20:29:32] -rw-r--r-- 1 boinc boinc       100 Apr  3 19:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-03 20:29:32] -rwxr-xr-x 1 boinc boinc      7986 Apr  3 19:03 run_atlas
[2025-04-03 20:29:32] -rw-r--r-- 1 boinc boinc       105 Apr  3 19:03 job.xml
[2025-04-03 20:29:32] -rw-r--r-- 2 boinc boinc     17571 Apr  3 19:03 start_atlas.sh
[2025-04-03 20:29:32] drwxrwx--x 2 boinc boinc      4096 Apr  3 19:03 shared
[2025-04-03 20:29:32] -rw-r--r-- 2 boinc boinc    507240 Apr  3 19:03 input.tar.gz
[2025-04-03 20:29:32] -rw-r--r-- 1 boinc boinc      6751 Apr  3 19:03 init_data.xml
[2025-04-03 20:29:32] -rw-r--r-- 2 boinc boinc 224839988 Apr  3 19:03 EVNT.44004365._000011.pool.root.1
[2025-04-03 20:29:32] -rw-r--r-- 1 boinc boinc         0 Apr  3 19:03 boinc_lockfile
[2025-04-03 20:29:32] -rw-r--r-- 1 boinc boinc      2547 Apr  3 19:03 pandaJob.out
[2025-04-03 20:29:32] -rw------- 1 boinc boinc       424 Apr  3 19:03 setup.sh.local
[2025-04-03 20:29:32] -rw------- 1 boinc boinc    979671 Apr  3 19:03 agis_schedconf.cvmfs.json
[2025-04-03 20:29:32] -rw------- 1 boinc boinc   1603525 Apr  3 19:03 agis_ddmendpoints.agis.ALL.json
[2025-04-03 20:29:32] drwx------ 4 boinc boinc      4096 Apr  3 19:03 pilot3
[2025-04-03 20:29:32] -rw-r--r-- 1 boinc boinc       529 Apr  3 20:28 boinc_task_state.xml
[2025-04-03 20:29:32] -rw------- 1 boinc boinc 200494196 Apr  3 20:28 HITS.44004367._000270.pool.root.1
[2025-04-03 20:29:32] -rw------- 1 boinc boinc      1028 Apr  3 20:29 memory_monitor_summary.json
[2025-04-03 20:29:32] -rw------- 1 boinc boinc    256923 Apr  3 20:29 log.44004367._000270.job.log.tgz.1
[2025-04-03 20:29:32] -rw------- 1 boinc boinc        95 Apr  3 20:29 pilot_heartbeat.json
[2025-04-03 20:29:32] -rw------- 1 boinc boinc      7689 Apr  3 20:29 heartbeat.json
[2025-04-03 20:29:32] -rw-r--r-- 1 boinc boinc      8192 Apr  3 20:29 boinc_mmap_file
[2025-04-03 20:29:32] -rw-r--r-- 1 boinc boinc        27 Apr  3 20:29 wrapper_checkpoint.txt
[2025-04-03 20:29:32] -rw------- 1 boinc boinc      4423 Apr  3 20:29 pilotlog.txt
[2025-04-03 20:29:32] -rw------- 1 boinc boinc    510484 Apr  3 20:29 log.44004367._000270.job.log.1
[2025-04-03 20:29:32] -rw------- 1 boinc boinc       357 Apr  3 20:29 output.list
[2025-04-03 20:29:32] -rw-r--r-- 1 boinc boinc       620 Apr  3 20:29 runtime_log
[2025-04-03 20:29:32] -rw------- 1 boinc boinc    788480 Apr  3 20:29 result.tar.gz
[2025-04-03 20:29:32] -rw-r--r-- 1 boinc boinc     11177 Apr  3 20:29 runtime_log.err
[2025-04-03 20:29:32] -rw------- 1 boinc boinc       657 Apr  3 20:29 aPWLDmcDDK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmA3rKDmBZWYEn.diag
[2025-04-03 20:29:32] -rw-r--r-- 1 boinc boinc     21699 Apr  3 20:29 stderr.txt
[2025-04-03 20:29:32] HITS file was successfully produced:
[2025-04-03 20:29:32] -rw------- 1 boinc boinc 200494196 Apr  3 20:28 shared/HITS.pool.root.1
[2025-04-03 20:29:32]  *** Contents of shared directory: ***
[2025-04-03 20:29:32] total 416664
[2025-04-03 20:29:32] -rw-r--r-- 2 boinc boinc     17571 Apr  3 19:03 start_atlas.sh
[2025-04-03 20:29:32] -rw-r--r-- 2 boinc boinc    507240 Apr  3 19:03 input.tar.gz
[2025-04-03 20:29:32] -rw-r--r-- 2 boinc boinc 224839988 Apr  3 19:03 ATLAS.root_0
[2025-04-03 20:29:32] -rw------- 1 boinc boinc 200494196 Apr  3 20:28 HITS.pool.root.1
[2025-04-03 20:29:32] -rw------- 1 boinc boinc    788480 Apr  3 20:29 result.tar.gz
20:29:33 (2473492): run_atlas exited; CPU time 17875.249837
20:29:33 (2473492): called boinc_finish(0)

</stderr_txt>
]]>

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