Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:01:12 (650739): wrapper (7.7.26015): starting
11:01:12 (650739): wrapper: running run_atlas (--nthreads 9)
[2025-04-03 11:01:12] Arguments: --nthreads 9
[2025-04-03 11:01:12] Threads: 9
[2025-04-03 11:01:12] Checking for CVMFS
[2025-04-03 11:01:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 11:01:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 11:01:12] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 11:01:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 11:01:13] 2.12.6.0 2555540 189928 340980 144455 1 550 35305050 40960000 11612 130560 0 20491173 99.773 11699962 30491 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-03 11:01:13] CVMFS is ok
[2025-04-03 11:01:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-03 11:01:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-03 11:01:13] Further information can be found at the LHC@home message board.
[2025-04-03 11:01:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 11:01:13] Checking for apptainer binary...
[2025-04-03 11:01:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 11:01:13] Running /usr/bin/apptainer --version
[2025-04-03 11:01:13] apptainer version 1.4.0-1.el9
[2025-04-03 11:01:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 11:01:13] c6-8-12-3.aglt2.org
[2025-04-03 11:01:13] apptainer works
[2025-04-03 11:01:14] Set ATHENA_PROC_NUMBER=9
[2025-04-03 11:01:14] Set ATHENA_CORE_NUMBER=9
[2025-04-03 11:01:14] Starting ATLAS job with PandaID=6584907478
[2025-04-03 11:01:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-03 14:07:43]  *** The last 200 lines of the pilot log: ***
[2025-04-03 14:07:43] 2025-04-03 18:07:27,290 | INFO     | current chi2=4.15691311740408 (change=0.1877430153255187 %)
[2025-04-03 14:07:43] 2025-04-03 18:07:27,290 | INFO     | right removable region: 175
[2025-04-03 14:07:43] 2025-04-03 18:07:27,290 | INFO     | model: linear, x: [1743692872.0, 1743692933.0, 1743692994.0, 1743693055.0, 1743693116.0, 1743693177.0, 1743693238.0, 1743693299.0, 1743693360.0, 1743693422.0, 1743
[2025-04-03 14:07:43] 2025-04-03 18:07:27,290 | INFO     | sum of square deviations: 1690464668.4488585
[2025-04-03 14:07:43] 2025-04-03 18:07:27,323 | INFO     | sum of deviations: 55552995023.60799
[2025-04-03 14:07:43] 2025-04-03 18:07:27,323 | INFO     | mean x: 1743698210.6420455
[2025-04-03 14:07:43] 2025-04-03 18:07:27,323 | INFO     | mean y: 2484601.7556818184
[2025-04-03 14:07:43] 2025-04-03 18:07:27,324 | INFO     | -- intersect: -57299900846.711464
[2025-04-03 14:07:43] 2025-04-03 18:07:27,324 | INFO     | intersect: -57299900846.711464
[2025-04-03 14:07:43] 2025-04-03 18:07:27,324 | INFO     | chi2: 1.6659966844119047
[2025-04-03 14:07:43] 2025-04-03 18:07:27,324 | INFO     | current chi2=1.6659966844119047 (change=59.99750668255969 %)
[2025-04-03 14:07:43] 2025-04-03 18:07:27,324 | INFO     | model: linear, x: [1743693177.0, 1743693238.0, 1743693299.0, 1743693360.0, 1743693422.0, 1743693482.0, 1743693543.0, 1743693604.0, 1743693665.0, 1743693727.0, 1743
[2025-04-03 14:07:43] 2025-04-03 18:07:27,324 | INFO     | sum of square deviations: 1550382126.736846
[2025-04-03 14:07:43] 2025-04-03 18:07:27,325 | INFO     | sum of deviations: 25502515503.298256
[2025-04-03 14:07:43] 2025-04-03 18:07:27,325 | INFO     | mean x: 1743698363.1754386
[2025-04-03 14:07:43] 2025-04-03 18:07:27,326 | INFO     | mean y: 2517313.023391813
[2025-04-03 14:07:43] 2025-04-03 18:07:27,326 | INFO     | -- intersect: -28679891864.095116
[2025-04-03 14:07:43] 2025-04-03 18:07:27,326 | INFO     | intersect: -28679891864.095116
[2025-04-03 14:07:43] 2025-04-03 18:07:27,326 | INFO     | chi2: 0.6783271967075011
[2025-04-03 14:07:43] 2025-04-03 18:07:27,326 | INFO     | current chi2=0.6783271967075011 (change=59.284000799380344 %)
[2025-04-03 14:07:43] 2025-04-03 18:07:27,326 | INFO     | model: linear, x: [1743693482.0, 1743693543.0, 1743693604.0, 1743693665.0, 1743693727.0, 1743693787.0, 1743693849.0, 1743693910.0, 1743693972.0, 1743694032.0, 1743
[2025-04-03 14:07:43] 2025-04-03 18:07:27,327 | INFO     | sum of square deviations: 1418263410.5361488
[2025-04-03 14:07:43] 2025-04-03 18:07:27,359 | INFO     | sum of deviations: 4482840287.524096
[2025-04-03 14:07:43] 2025-04-03 18:07:27,360 | INFO     | mean x: 1743698515.7048192
[2025-04-03 14:07:43] 2025-04-03 18:07:27,360 | INFO     | mean y: 2541418.9698795183
[2025-04-03 14:07:43] 2025-04-03 18:07:27,360 | INFO     | -- intersect: -5508932611.473141
[2025-04-03 14:07:43] 2025-04-03 18:07:27,360 | INFO     | intersect: -5508932611.473141
[2025-04-03 14:07:43] 2025-04-03 18:07:27,360 | INFO     | chi2: 0.06762532328787199
[2025-04-03 14:07:43] 2025-04-03 18:07:27,360 | INFO     | current chi2=0.06762532328787199 (change=90.03057468193592 %)
[2025-04-03 14:07:43] 2025-04-03 18:07:27,361 | INFO     | model: linear, x: [1743693787.0, 1743693849.0, 1743693910.0, 1743693972.0, 1743694032.0, 1743694093.0, 1743694153.0, 1743694214.0, 1743694276.0, 1743694336.0, 1743
[2025-04-03 14:07:43] 2025-04-03 18:07:27,361 | INFO     | sum of square deviations: 1293865769.0310514
[2025-04-03 14:07:43] 2025-04-03 18:07:27,362 | INFO     | sum of deviations: -1283020419.5652168
[2025-04-03 14:07:43] 2025-04-03 18:07:27,362 | INFO     | mean x: 1743698668.2360249
[2025-04-03 14:07:43] 2025-04-03 18:07:27,362 | INFO     | mean y: 2548440.304347826
[2025-04-03 14:07:43] 2025-04-03 18:07:27,362 | INFO     | -- intersect: 1731631201.7958174
[2025-04-03 14:07:43] 2025-04-03 18:07:27,362 | INFO     | intersect: 1731631201.7958174
[2025-04-03 14:07:43] 2025-04-03 18:07:27,362 | INFO     | chi2: 0.004558809198224545
[2025-04-03 14:07:43] 2025-04-03 18:07:27,362 | INFO     | current chi2=0.004558809198224545 (change=93.25872472532471 %)
[2025-04-03 14:07:43] 2025-04-03 18:07:27,383 | INFO     | model: linear, x: [1743694093.0, 1743694153.0, 1743694214.0, 1743694276.0, 1743694336.0, 1743694397.0, 1743694459.0, 1743694523.0, 1743694583.0, 1743694642.0, 1743
[2025-04-03 14:07:43] 2025-04-03 18:07:27,384 | INFO     | sum of square deviations: 1176995805.743593
[2025-04-03 14:07:43] 2025-04-03 18:07:27,385 | INFO     | sum of deviations: -946778785.5641016
[2025-04-03 14:07:43] 2025-04-03 18:07:27,385 | INFO     | mean x: 1743698820.7435896
[2025-04-03 14:07:43] 2025-04-03 18:07:27,385 | INFO     | mean y: 2547989.185897436
[2025-04-03 14:07:43] 2025-04-03 18:07:27,385 | INFO     | -- intersect: 1405184297.5202177
[2025-04-03 14:07:43] 2025-04-03 18:07:27,385 | INFO     | intersect: 1405184297.5202177
[2025-04-03 14:07:43] 2025-04-03 18:07:27,386 | INFO     | chi2: 0.004030490526657214
[2025-04-03 14:07:43] 2025-04-03 18:07:27,386 | INFO     | current chi2=0.004030490526657214 (change=11.588962130134508 %)
[2025-04-03 14:07:43] 2025-04-03 18:07:27,386 | INFO     | left removable region: 50
[2025-04-03 14:07:43] 2025-04-03 18:07:27,386 | INFO     | model: linear, x: [1743695617.0, 1743695680.0, 1743695739.0, 1743695802.0, 1743695862.0, 1743695926.0, 1743695983.0, 1743696045.0, 1743696106.0, 1743696168.0, 1743
[2025-04-03 14:07:43] 2025-04-03 18:07:27,386 | INFO     | sum of square deviations: 605442060.0480018
[2025-04-03 14:07:43] 2025-04-03 18:07:27,409 | INFO     | sum of deviations: 588047012.5919998
[2025-04-03 14:07:43] 2025-04-03 18:07:27,409 | INFO     | mean x: 1743699400.296
[2025-04-03 14:07:43] 2025-04-03 18:07:27,409 | INFO     | mean y: 2545059.984
[2025-04-03 14:07:43] 2025-04-03 18:07:27,409 | INFO     | -- intersect: -1691055848.9472833
[2025-04-03 14:07:43] 2025-04-03 18:07:27,409 | INFO     | intersect: -1691055848.9472833
[2025-04-03 14:07:43] 2025-04-03 18:07:27,410 | INFO     | chi2: 0.00276323606101185
[2025-04-03 14:07:43] 2025-04-03 18:07:27,410 | INFO     | -- intersect: -1691055848.9472833
[2025-04-03 14:07:43] 2025-04-03 18:07:27,410 | INFO     | current memory leak: 0.97 B/s (using 125 data points, chi2=0.00)
[2025-04-03 14:07:43] 2025-04-03 18:07:27,410 | INFO     | ..............................
[2025-04-03 14:07:43] 2025-04-03 18:07:27,411 | INFO     | . Timing measurements:
[2025-04-03 14:07:43] 2025-04-03 18:07:27,411 | INFO     | . get job = 0 s
[2025-04-03 14:07:43] 2025-04-03 18:07:27,411 | INFO     | . initial setup = 5 s
[2025-04-03 14:07:43] 2025-04-03 18:07:27,411 | INFO     | . payload setup = 19 s
[2025-04-03 14:07:43] 2025-04-03 18:07:27,411 | INFO     | . stage-in = 0 s
[2025-04-03 14:07:43] 2025-04-03 18:07:27,411 | INFO     | . payload execution = 11046 s
[2025-04-03 14:07:43] 2025-04-03 18:07:27,411 | INFO     | . stage-out = 4 s
[2025-04-03 14:07:43] 2025-04-03 18:07:27,411 | INFO     | . log creation = 1 s
[2025-04-03 14:07:43] 2025-04-03 18:07:27,411 | INFO     | ..............................
[2025-04-03 14:07:43] 2025-04-03 18:07:27,693 | INFO     | 
[2025-04-03 14:07:43] 2025-04-03 18:07:27,693 | INFO     | job summary report
[2025-04-03 14:07:43] 2025-04-03 18:07:27,693 | INFO     | --------------------------------------------------
[2025-04-03 14:07:43] 2025-04-03 18:07:27,693 | INFO     | PanDA job id: 6584907478
[2025-04-03 14:07:43] 2025-04-03 18:07:27,693 | INFO     | task id: 44004367
[2025-04-03 14:07:43] 2025-04-03 18:07:27,693 | INFO     | errors: (none)
[2025-04-03 14:07:43] 2025-04-03 18:07:27,693 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-03 14:07:43] 2025-04-03 18:07:27,693 | INFO     | pilot state: finished 
[2025-04-03 14:07:43] 2025-04-03 18:07:27,694 | INFO     | transexitcode: 0
[2025-04-03 14:07:43] 2025-04-03 18:07:27,694 | INFO     | exeerrorcode: 0
[2025-04-03 14:07:43] 2025-04-03 18:07:27,694 | INFO     | exeerrordiag: 
[2025-04-03 14:07:43] 2025-04-03 18:07:27,694 | INFO     | exitcode: 0
[2025-04-03 14:07:43] 2025-04-03 18:07:27,694 | INFO     | exitmsg: OK
[2025-04-03 14:07:43] 2025-04-03 18:07:27,694 | INFO     | cpuconsumptiontime: 43131 s
[2025-04-03 14:07:43] 2025-04-03 18:07:27,694 | INFO     | nevents: 400
[2025-04-03 14:07:43] 2025-04-03 18:07:27,694 | INFO     | neventsw: 0
[2025-04-03 14:07:43] 2025-04-03 18:07:27,694 | INFO     | pid: 668219
[2025-04-03 14:07:43] 2025-04-03 18:07:27,694 | INFO     | pgrp: 668219
[2025-04-03 14:07:43] 2025-04-03 18:07:27,694 | INFO     | corecount: 9
[2025-04-03 14:07:43] 2025-04-03 18:07:27,694 | INFO     | event service: False
[2025-04-03 14:07:43] 2025-04-03 18:07:27,694 | INFO     | sizes: {0: 2417101, 1: 2417300, 12: 2417300, 15: 2417534, 23: 2417562, 11069: 2446685, 11074: 2455626, 11076: 2455682, 11108: 2455852}
[2025-04-03 14:07:43] 2025-04-03 18:07:27,694 | INFO     | --------------------------------------------------
[2025-04-03 14:07:43] 2025-04-03 18:07:27,694 | INFO     | 
[2025-04-03 14:07:43] 2025-04-03 18:07:27,694 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-04-03 14:07:43] 2025-04-03 18:07:27,724 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,724 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,724 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,726 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-03 14:07:43] 2025-04-03 18:07:27,726 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,726 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-03 14:07:43] 2025-04-03 18:07:27,726 | INFO     | job 6584907478 has completed (purged errors)
[2025-04-03 14:07:43] 2025-04-03 18:07:27,726 | INFO     | overall cleanup function is called
[2025-04-03 14:07:43] 2025-04-03 18:07:28,741 | INFO     | --- collectZombieJob: --- 10, [668219]
[2025-04-03 14:07:43] 2025-04-03 18:07:28,741 | INFO     | zombie collector waiting for pid 668219
[2025-04-03 14:07:43] 2025-04-03 18:07:28,741 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-03 14:07:43] 2025-04-03 18:07:28,741 | INFO     | collected zombie processes
[2025-04-03 14:07:43] 2025-04-03 18:07:28,741 | INFO     | will attempt to kill all subprocesses of pid=668219
[2025-04-03 14:07:43] 2025-04-03 18:07:28,996 | INFO     | process IDs to be killed: [668219] (in reverse order)
[2025-04-03 14:07:43] 2025-04-03 18:07:29,451 | WARNING  | found no corresponding commands to process id(s)
[2025-04-03 14:07:43] 2025-04-03 18:07:29,451 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-03 14:07:43] 2025-04-03 18:07:29,475 | INFO     | did not find any defunct processes belonging to 668219
[2025-04-03 14:07:43] 2025-04-03 18:07:29,498 | INFO     | did not find any defunct processes belonging to 668219
[2025-04-03 14:07:43] 2025-04-03 18:07:29,498 | INFO     | ready for new job
[2025-04-03 14:07:43] 2025-04-03 18:07:29,498 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-03 14:07:43] 2025-04-03 18:07:29,504 | INFO     | ***************************************
[2025-04-03 14:07:43] 2025-04-03 18:07:29,504 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-03 14:07:43] 2025-04-03 18:07:29,504 | INFO     | ***************************************
[2025-04-03 14:07:43] 2025-04-03 18:07:29,504 | INFO     | 
[2025-04-03 14:07:43] 2025-04-03 18:07:29,525 | INFO     | architecture information:
[2025-04-03 14:07:43] 2025-04-03 18:07:29,530 | INFO     | executing command: cat /etc/os-release
[2025-04-03 14:07:43] 2025-04-03 18:07:29,580 | INFO     | cat /etc/os-release:
[2025-04-03 14:07:43] NAME="CentOS Linux"
[2025-04-03 14:07:43] VERSION="7 (Core)"
[2025-04-03 14:07:43] ID="centos"
[2025-04-03 14:07:43] ID_LIKE="rhel fedora"
[2025-04-03 14:07:43] VERSION_ID="7"
[2025-04-03 14:07:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-03 14:07:43] ANSI_COLOR="0;31"
[2025-04-03 14:07:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-03 14:07:43] HOME_URL="https://www.centos.org/"
[2025-04-03 14:07:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-03 14:07:43] 
[2025-04-03 14:07:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-03 14:07:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-03 14:07:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-03 14:07:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-03 14:07:43] 
[2025-04-03 14:07:43] 2025-04-03 18:07:29,581 | INFO     | ***************************************
[2025-04-03 14:07:43] 2025-04-03 18:07:30,084 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-04-03 14:07:43] 2025-04-03 18:07:30,113 | INFO     | sufficient remaining disk space (55047094272 B)
[2025-04-03 14:07:43] 2025-04-03 18:07:30,113 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-03 14:07:43] 2025-04-03 18:07:30,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-03 14:07:43] 2025-04-03 18:07:30,135 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-03 14:07:43] 2025-04-03 18:07:30,153 | INFO     | all payload control threads have been joined
[2025-04-03 14:07:43] 2025-04-03 18:07:30,568 | INFO     | all job control threads have been joined
[2025-04-03 14:07:43] 2025-04-03 18:07:30,869 | INFO     | all data control threads have been joined
[2025-04-03 14:07:43] 2025-04-03 18:07:31,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-03 14:07:43] 2025-04-03 18:07:31,054 | INFO     | aborting loop
[2025-04-03 14:07:43] 2025-04-03 18:07:31,160 | INFO     | [job] retrieve thread has finished
[2025-04-03 14:07:43] 2025-04-03 18:07:31,190 | INFO     | [payload] failed_post thread has finished
[2025-04-03 14:07:43] 2025-04-03 18:07:31,200 | INFO     | [payload] control thread has finished
[2025-04-03 14:07:43] 2025-04-03 18:07:31,200 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-03 14:07:43] 2025-04-03 18:07:31,596 | INFO     | [job] control thread has finished
[2025-04-03 14:07:43] 2025-04-03 18:07:31,597 | INFO     | [payload] validate_pre thread has finished
[2025-04-03 14:07:43] 2025-04-03 18:07:31,644 | INFO     | [job] validate thread has finished
[2025-04-03 14:07:43] 2025-04-03 18:07:31,694 | INFO     | [job] create_data_payload thread has finished
[2025-04-03 14:07:43] 2025-04-03 18:07:31,875 | INFO     | [data] control thread has finished
[2025-04-03 14:07:43] 2025-04-03 18:07:32,059 | INFO     | [data] copytool_in thread has finished
[2025-04-03 14:07:43] 2025-04-03 18:07:32,060 | INFO     | [job] job monitor thread has finished
[2025-04-03 14:07:43] 2025-04-03 18:07:32,198 | INFO     | [payload] validate_post thread has finished
[2025-04-03 14:07:43] 2025-04-03 18:07:32,199 | INFO     | [data] copytool_out thread has finished
[2025-04-03 14:07:43] 2025-04-03 18:07:32,199 | INFO     | [payload] execute_payloads thread has finished
[2025-04-03 14:07:43] 2025-04-03 18:07:32,838 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-03 14:07:43] 2025-04-03 18:07:33,324 | INFO     | PID=656257 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-03 14:07:43] 2025-04-03 18:07:33,325 | INFO     | .. there are 11 such processes running
[2025-04-03 14:07:43] 2025-04-03 18:07:33,325 | INFO     | found 0 job(s) in 20 queues
[2025-04-03 14:07:43] 2025-04-03 18:07:33,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-03 14:07:43] 2025-04-03 18:07:33,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-03 14:07:43] 2025-04-03 18:07:33,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-03 14:07:43] 2025-04-03 18:07:33,844 | INFO     | [job] queue monitor thread has finished
[2025-04-03 14:07:43] 2025-04-03 18:07:37,354 | INFO     | [data] queue_monitor thread has finished
[2025-04-03 14:07:43] 2025-04-03 18:07:38,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140068921292608)>', '<ExcThread(monitor, started 140068060649216)>']
[2025-04-03 14:07:43] 2025-04-03 18:07:38,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-03 14:07:43] 2025-04-03 18:07:38,355 | INFO     | [monitor] control thread has ended
[2025-04-03 14:07:43] 2025-04-03 18:07:43,144 | INFO     | all workflow threads have been joined
[2025-04-03 14:07:43] 2025-04-03 18:07:43,144 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-03 14:07:43] 2025-04-03 18:07:43,144 | INFO     | traces error code: 0
[2025-04-03 14:07:43] 2025-04-03 18:07:43,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-03 14:07:43] 2025-04-03 18:07:43,322 [wrapper] ==== pilot stdout END ====
[2025-04-03 14:07:43] 2025-04-03 18:07:43,325 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-03 14:07:43] 2025-04-03 18:07:43,327 [wrapper] pilotpid: 656257
[2025-04-03 14:07:43] 2025-04-03 18:07:43,330 [wrapper] Pilot exit status: 0
[2025-04-03 14:07:43] 2025-04-03 18:07:43,345 [wrapper] pandaids: 6584907478
[2025-04-03 14:07:43] 2025-04-03 18:07:43,428 [wrapper] cleanup supervisor_pilot 1603001 656258
[2025-04-03 14:07:43] 2025-04-03 18:07:43,430 [wrapper] Test setup, not cleaning
[2025-04-03 14:07:43] 2025-04-03 18:07:43,433 [wrapper] apfmon messages muted
[2025-04-03 14:07:43] 2025-04-03 18:07:43,435 [wrapper] ==== wrapper stdout END ====
[2025-04-03 14:07:43] 2025-04-03 18:07:43,438 [wrapper] ==== wrapper stderr END ====
[2025-04-03 14:07:43]  *** Error codes and diagnostics ***
[2025-04-03 14:07:43]     "exeErrorCode": 0,
[2025-04-03 14:07:43]     "exeErrorDiag": "",
[2025-04-03 14:07:43]     "pilotErrorCode": 0,
[2025-04-03 14:07:43]     "pilotErrorDiag": "",
[2025-04-03 14:07:43]  *** Listing of results directory ***
[2025-04-03 14:07:43] total 413200
[2025-04-03 14:07:43] -rw-r--r--. 1 boincer umatlas    494584 Apr  2 21:28 pilot3.tar.gz
[2025-04-03 14:07:43] -rw-r--r--. 1 boincer umatlas      5112 Apr  2 21:59 queuedata.json
[2025-04-03 14:07:43] -rwx------. 1 boincer umatlas     37140 Apr  2 22:02 runpilot2-wrapper.sh
[2025-04-03 14:07:43] -rw-r--r--. 1 boincer umatlas       100 Apr  3 11:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-03 14:07:43] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  3 11:01 run_atlas
[2025-04-03 14:07:43] -rw-r--r--. 1 boincer umatlas       105 Apr  3 11:01 job.xml
[2025-04-03 14:07:43] -rw-r--r--. 2 boincer umatlas 224077396 Apr  3 11:01 EVNT.44004365._000245.pool.root.1
[2025-04-03 14:07:43] drwxrwx--x. 2 boincer umatlas      4096 Apr  3 11:01 shared
[2025-04-03 14:07:43] -rw-r--r--. 2 boincer umatlas    507248 Apr  3 11:01 input.tar.gz
[2025-04-03 14:07:43] -rw-r--r--. 2 boincer umatlas     17571 Apr  3 11:01 start_atlas.sh
[2025-04-03 14:07:43] -rw-r--r--. 1 boincer umatlas         0 Apr  3 11:01 boinc_lockfile
[2025-04-03 14:07:43] -rw-r--r--. 1 boincer umatlas      2548 Apr  3 11:01 pandaJob.out
[2025-04-03 14:07:43] -rw-------. 1 boincer umatlas       467 Apr  3 11:01 setup.sh.local
[2025-04-03 14:07:43] -rw-------. 1 boincer umatlas    988211 Apr  3 11:01 agis_schedconf.cvmfs.json
[2025-04-03 14:07:43] drwx------. 4 boincer umatlas      4096 Apr  3 11:01 pilot3
[2025-04-03 14:07:43] -rw-r--r--. 1 boincer umatlas      6841 Apr  3 14:00 init_data.xml
[2025-04-03 14:07:43] -rw-r--r--. 1 boincer umatlas       530 Apr  3 14:06 boinc_task_state.xml
[2025-04-03 14:07:43] -rw-------. 1 boincer umatlas 192182195 Apr  3 14:06 HITS.44004367._006119.pool.root.1
[2025-04-03 14:07:43] -rw-------. 1 boincer umatlas      1041 Apr  3 14:06 memory_monitor_summary.json
[2025-04-03 14:07:43] -rw-------. 1 boincer umatlas   1603525 Apr  3 14:06 agis_ddmendpoints.agis.ALL.json
[2025-04-03 14:07:43] -rw-------. 1 boincer umatlas    400675 Apr  3 14:06 log.44004367._006119.job.log.tgz.1
[2025-04-03 14:07:43] -rw-------. 1 boincer umatlas        95 Apr  3 14:07 pilot_heartbeat.json
[2025-04-03 14:07:43] -rw-------. 1 boincer umatlas      7724 Apr  3 14:07 heartbeat.json
[2025-04-03 14:07:43] -rw-r--r--. 1 boincer umatlas        28 Apr  3 14:07 wrapper_checkpoint.txt
[2025-04-03 14:07:43] -rw-------. 1 boincer umatlas      4613 Apr  3 14:07 pilotlog.txt
[2025-04-03 14:07:43] -rw-r--r--. 1 boincer umatlas      8192 Apr  3 14:07 boinc_mmap_file
[2025-04-03 14:07:43] -rw-------. 1 boincer umatlas   1110439 Apr  3 14:07 log.44004367._006119.job.log.1
[2025-04-03 14:07:43] -rw-------. 1 boincer umatlas       357 Apr  3 14:07 output.list
[2025-04-03 14:07:43] -rw-r--r--. 1 boincer umatlas       620 Apr  3 14:07 runtime_log
[2025-04-03 14:07:43] -rw-------. 1 boincer umatlas   1525760 Apr  3 14:07 result.tar.gz
[2025-04-03 14:07:43] -rw-r--r--. 1 boincer umatlas     11425 Apr  3 14:07 runtime_log.err
[2025-04-03 14:07:43] -rw-------. 1 boincer umatlas       655 Apr  3 14:07 ivfKDmJ5OK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmOPGLDmPPzLMn.diag
[2025-04-03 14:07:43] -rw-r--r--. 1 boincer umatlas     21785 Apr  3 14:07 stderr.txt
[2025-04-03 14:07:43] HITS file was successfully produced:
[2025-04-03 14:07:43] -rw-------. 1 boincer umatlas 192182195 Apr  3 14:06 shared/HITS.pool.root.1
[2025-04-03 14:07:43]  *** Contents of shared directory: ***
[2025-04-03 14:07:43] total 408520
[2025-04-03 14:07:43] -rw-r--r--. 2 boincer umatlas 224077396 Apr  3 11:01 ATLAS.root_0
[2025-04-03 14:07:43] -rw-r--r--. 2 boincer umatlas    507248 Apr  3 11:01 input.tar.gz
[2025-04-03 14:07:43] -rw-r--r--. 2 boincer umatlas     17571 Apr  3 11:01 start_atlas.sh
[2025-04-03 14:07:43] -rw-------. 1 boincer umatlas 192182195 Apr  3 14:06 HITS.pool.root.1
[2025-04-03 14:07:43] -rw-------. 1 boincer umatlas   1525760 Apr  3 14:07 result.tar.gz
14:07:44 (650739): run_atlas exited; CPU time 43021.549732
14:07:44 (650739): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN