Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
12:01:39 (354156): wrapper (7.7.26015): starting
12:01:39 (354156): wrapper: running run_atlas (--nthreads 12)
[2025-04-03 12:01:39] Arguments: --nthreads 12
[2025-04-03 12:01:39] Threads: 12
[2025-04-03 12:01:39] Checking for CVMFS
[2025-04-03 12:01:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 12:01:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 12:01:39] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 12:01:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 12:01:39] 2.12.3.3 2468 782 1705340 144442 3 231 2528698 4096000 0 130560 0 1055995 92.042 16847029 3326 http://s1fnal-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-03 12:01:39] CVMFS is ok
[2025-04-03 12:01:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-03 12:01:39] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-03 12:01:39] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-03 12:01:39] Further information can be found at the LHC@home message board.
[2025-04-03 12:01:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 12:01:39] Checking for apptainer binary...
[2025-04-03 12:01:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 12:01:39] Running /usr/bin/apptainer --version
[2025-04-03 12:01:39] apptainer version 1.4.0-1.fc42
[2025-04-03 12:01:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 12:01:41] subzero
[2025-04-03 12:01:41] apptainer works
[2025-04-03 12:01:41] Set ATHENA_PROC_NUMBER=12
[2025-04-03 12:01:41] Set ATHENA_CORE_NUMBER=12
[2025-04-03 12:01:41] Starting ATLAS job with PandaID=6584884834
[2025-04-03 12:01:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/david/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-03 13:11:41]  *** The last 200 lines of the pilot log: ***
[2025-04-03 13:11:41]  guid=120d9dee-9f1b-4779-8bba-134b2d089a51
[2025-04-03 13:11:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-03 13:11:41]  is_altstaged=None
[2025-04-03 13:11:41]  is_tar=False
[2025-04-03 13:11:41]  lfn=log.44004367._000167.job.log.tgz.1
[2025-04-03 13:11:41]  mtime=0
[2025-04-03 13:11:41]  protocol_id=None
[2025-04-03 13:11:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-03 13:11:41]  replicas=None
[2025-04-03 13:11:41]  scope=mc23_13p6TeV
[2025-04-03 13:11:41]  status=None
[2025-04-03 13:11:41]  status_code=0
[2025-04-03 13:11:41]  storage_token=
[2025-04-03 13:11:41]  surl=/home/david/boinc/slots/0/PanDA_Pilot-6584884834/log.44004367._000167.job.log.tgz.1
[2025-04-03 13:11:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/c9/log.44004367._000167.job.log.tgz.1
[2025-04-03 13:11:41]  workdir=None
[2025-04-03 13:11:41] ]
[2025-04-03 13:11:41] 2025-04-03 11:11:17,384 | INFO     | transferring file log.44004367._000167.job.log.tgz.1 from /home/david/boinc/slots/0/PanDA_Pilot-6584884834/log.44004367._000167.job.log.tgz.1 to /home/david/boinc/
[2025-04-03 13:11:41] 2025-04-03 11:11:17,385 | INFO     | executing command: /usr/bin/env mv /home/david/boinc/slots/0/PanDA_Pilot-6584884834/log.44004367._000167.job.log.tgz.1 /home/david/boinc/slots/0/log.44004367._0001
[2025-04-03 13:11:41] 2025-04-03 11:11:17,394 | INFO     | adding to output.list: log.44004367._000167.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/09/c9/log.44004367._000167.job.log.tg
[2025-04-03 13:11:41] 2025-04-03 11:11:17,394 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-03 13:11:41] 2025-04-03 11:11:17,394 | INFO     | summary of transferred files:
[2025-04-03 13:11:41] 2025-04-03 11:11:17,394 | INFO     |  -- lfn=log.44004367._000167.job.log.tgz.1, status_code=0, status=transferred
[2025-04-03 13:11:41] 2025-04-03 11:11:17,394 | INFO     | stage-out finished correctly
[2025-04-03 13:11:41] 2025-04-03 11:11:17,431 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-03 13:11:41] 2025-04-03 11:11:18,426 | INFO     | monitor loop #320: job 0:6584884834 is in state 'finished'
[2025-04-03 13:11:41] 2025-04-03 11:11:18,426 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-03 13:11:41] 2025-04-03 11:11:19,284 | INFO     | job 6584884834 has state=finished
[2025-04-03 13:11:41] 2025-04-03 11:11:19,284 | INFO     | preparing for final server update for job 6584884834 in state='finished'
[2025-04-03 13:11:41] 2025-04-03 11:11:19,285 | INFO     | this job has now completed (state=finished)
[2025-04-03 13:11:41] 2025-04-03 11:11:19,285 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-03 13:11:41] 2025-04-03 11:11:19,285 | INFO     | log transfer has been attempted: DONE
[2025-04-03 13:11:41] 2025-04-03 11:11:19,285 | INFO     | job 6584884834 has finished - writing final server update
[2025-04-03 13:11:41] 2025-04-03 11:11:19,285 | INFO     | total number of processed events: 400 (read)
[2025-04-03 13:11:41] 2025-04-03 11:11:19,286 | INFO     | executing command: lscpu
[2025-04-03 13:11:41] 2025-04-03 11:11:19,308 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-03 13:11:41] 2025-04-03 11:11:20,929 | INFO     | monitor loop #321: job 0:6584884834 is in state 'finished'
[2025-04-03 13:11:41] 2025-04-03 11:11:20,929 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-03 13:11:41] 2025-04-03 11:11:21,411 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-03 13:11:41] 2025-04-03 11:11:21,411 | INFO     | using path: /home/david/boinc/slots/0/PanDA_Pilot-6584884834/memory_monitor_summary.json (trf name=prmon)
[2025-04-03 13:11:41] 2025-04-03 11:11:21,411 | INFO     | extracted standard info from prmon json
[2025-04-03 13:11:41] 2025-04-03 11:11:21,411 | INFO     | extracted standard memory fields from prmon json
[2025-04-03 13:11:41] 2025-04-03 11:11:21,411 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-03 13:11:41] 2025-04-03 11:11:21,412 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-03 13:11:41] 2025-04-03 11:11:21,412 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-03 13:11:41] 2025-04-03 11:11:21,413 | INFO     | fitting pss+swap vs Time
[2025-04-03 13:11:41] 2025-04-03 11:11:21,413 | INFO     | model: linear, x: [1743674950.0, 1743675011.0, 1743675072.0, 1743675133.0, 1743675194.0, 1743675255.0, 1743675316.0, 1743675377.0, 1743675438.0, 1743675499.0, 1743
[2025-04-03 13:11:41] 2025-04-03 11:11:21,413 | INFO     | sum of square deviations: 66959395.0
[2025-04-03 13:11:41] 2025-04-03 11:11:21,413 | INFO     | sum of deviations: 38750401554.50001
[2025-04-03 13:11:41] 2025-04-03 11:11:21,413 | INFO     | mean x: 1743676749.5
[2025-04-03 13:11:41] 2025-04-03 11:11:21,413 | INFO     | mean y: 2193418.783333333
[2025-04-03 13:11:41] 2025-04-03 11:11:21,413 | INFO     | -- intersect: -1009089573679.3262
[2025-04-03 13:11:41] 2025-04-03 11:11:21,413 | INFO     | intersect: -1009089573679.3262
[2025-04-03 13:11:41] 2025-04-03 11:11:21,413 | INFO     | chi2: 2.2387351492076424
[2025-04-03 13:11:41] 2025-04-03 11:11:21,413 | INFO     | -- intersect: -1009089573679.3262
[2025-04-03 13:11:41] 2025-04-03 11:11:21,413 | INFO     | current memory leak: 578.71 B/s (using 60 data points, chi2=2.24)
[2025-04-03 13:11:41] 2025-04-03 11:11:21,414 | INFO     | ..............................
[2025-04-03 13:11:41] 2025-04-03 11:11:21,414 | INFO     | . Timing measurements:
[2025-04-03 13:11:41] 2025-04-03 11:11:21,414 | INFO     | . get job = 0 s
[2025-04-03 13:11:41] 2025-04-03 11:11:21,414 | INFO     | . initial setup = 28 s
[2025-04-03 13:11:41] 2025-04-03 11:11:21,414 | INFO     | . payload setup = 40 s
[2025-04-03 13:11:41] 2025-04-03 11:11:21,414 | INFO     | . stage-in = 0 s
[2025-04-03 13:11:41] 2025-04-03 11:11:21,414 | INFO     | . payload execution = 4032 s
[2025-04-03 13:11:41] 2025-04-03 11:11:21,414 | INFO     | . stage-out = 0 s
[2025-04-03 13:11:41] 2025-04-03 11:11:21,414 | INFO     | . log creation = 0 s
[2025-04-03 13:11:41] 2025-04-03 11:11:21,414 | INFO     | ..............................
[2025-04-03 13:11:41] 2025-04-03 11:11:21,453 | INFO     | 
[2025-04-03 13:11:41] 2025-04-03 11:11:21,453 | INFO     | job summary report
[2025-04-03 13:11:41] 2025-04-03 11:11:21,453 | INFO     | --------------------------------------------------
[2025-04-03 13:11:41] 2025-04-03 11:11:21,453 | INFO     | PanDA job id: 6584884834
[2025-04-03 13:11:41] 2025-04-03 11:11:21,453 | INFO     | task id: 44004367
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | errors: (none)
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | pilot state: finished 
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | transexitcode: 0
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | exeerrorcode: 0
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | exeerrordiag: 
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | exitcode: 0
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | exitmsg: OK
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | cpuconsumptiontime: 24899 s
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | nevents: 400
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | neventsw: 0
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | pid: 364596
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | pgrp: 364596
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | corecount: 12
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | event service: False
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | sizes: {0: 2416488, 1: 2417092, 2: 2417375, 4: 2417581, 13: 2417609, 4075: 2443461, 4076: 2452464, 4080: 2452578}
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | --------------------------------------------------
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | 
[2025-04-03 13:11:41] 2025-04-03 11:11:21,454 | INFO     | executing command: ls -lF /home/david/boinc/slots/0
[2025-04-03 13:11:41] 2025-04-03 11:11:21,466 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,466 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,466 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,466 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | job 6584884834 has completed (purged errors)
[2025-04-03 13:11:41] 2025-04-03 11:11:21,467 | INFO     | overall cleanup function is called
[2025-04-03 13:11:41] 2025-04-03 11:11:22,475 | INFO     | --- collectZombieJob: --- 10, [364596]
[2025-04-03 13:11:41] 2025-04-03 11:11:22,475 | INFO     | zombie collector waiting for pid 364596
[2025-04-03 13:11:41] 2025-04-03 11:11:22,475 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-03 13:11:41] 2025-04-03 11:11:22,475 | INFO     | collected zombie processes
[2025-04-03 13:11:41] 2025-04-03 11:11:22,475 | INFO     | will attempt to kill all subprocesses of pid=364596
[2025-04-03 13:11:41] 2025-04-03 11:11:22,535 | INFO     | process IDs to be killed: [364596] (in reverse order)
[2025-04-03 13:11:41] 2025-04-03 11:11:22,565 | WARNING  | found no corresponding commands to process id(s)
[2025-04-03 13:11:41] 2025-04-03 11:11:22,565 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-03 13:11:41] 2025-04-03 11:11:22,567 | INFO     | did not find any defunct processes belonging to 364596
[2025-04-03 13:11:41] 2025-04-03 11:11:22,570 | INFO     | did not find any defunct processes belonging to 364596
[2025-04-03 13:11:41] 2025-04-03 11:11:22,570 | INFO     | ready for new job
[2025-04-03 13:11:41] 2025-04-03 11:11:22,570 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-03 13:11:41] 2025-04-03 11:11:22,570 | INFO     | ***************************************
[2025-04-03 13:11:41] 2025-04-03 11:11:22,571 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-03 13:11:41] 2025-04-03 11:11:22,571 | INFO     | ***************************************
[2025-04-03 13:11:41] 2025-04-03 11:11:22,571 | INFO     | 
[2025-04-03 13:11:41] 2025-04-03 11:11:22,571 | INFO     | architecture information:
[2025-04-03 13:11:41] 2025-04-03 11:11:22,571 | INFO     | executing command: cat /etc/os-release
[2025-04-03 13:11:41] 2025-04-03 11:11:22,579 | INFO     | cat /etc/os-release:
[2025-04-03 13:11:41] NAME="CentOS Linux"
[2025-04-03 13:11:41] VERSION="7 (Core)"
[2025-04-03 13:11:41] ID="centos"
[2025-04-03 13:11:41] ID_LIKE="rhel fedora"
[2025-04-03 13:11:41] VERSION_ID="7"
[2025-04-03 13:11:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-03 13:11:41] ANSI_COLOR="0;31"
[2025-04-03 13:11:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-03 13:11:41] HOME_URL="https://www.centos.org/"
[2025-04-03 13:11:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-03 13:11:41] 
[2025-04-03 13:11:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-03 13:11:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-03 13:11:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-03 13:11:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-03 13:11:41] 
[2025-04-03 13:11:41] 2025-04-03 11:11:22,579 | INFO     | ***************************************
[2025-04-03 13:11:41] 2025-04-03 11:11:23,082 | INFO     | executing command: df -mP /home/david/boinc/slots/0
[2025-04-03 13:11:41] 2025-04-03 11:11:23,091 | INFO     | sufficient remaining disk space (284674752512 B)
[2025-04-03 13:11:41] 2025-04-03 11:11:23,091 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-03 13:11:41] 2025-04-03 11:11:23,091 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-03 13:11:41] 2025-04-03 11:11:23,091 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-03 13:11:41] 2025-04-03 11:11:23,091 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-03 13:11:41] 2025-04-03 11:11:23,092 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-03 13:11:41] 2025-04-03 11:11:23,092 | INFO     | found 0 job(s) in 20 queues
[2025-04-03 13:11:41] 2025-04-03 11:11:23,092 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-03 13:11:41] 2025-04-03 11:11:23,092 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-03 13:11:41] 2025-04-03 11:11:23,312 | INFO     | all data control threads have been joined
[2025-04-03 13:11:41] 2025-04-03 11:11:23,432 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-03 13:11:41] 2025-04-03 11:11:23,432 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-03 13:11:41] 2025-04-03 11:11:23,432 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-03 13:11:41] 2025-04-03 11:11:23,432 | INFO     | will abort loop
[2025-04-03 13:11:41] 2025-04-03 11:11:23,469 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-03 13:11:41] 2025-04-03 11:11:23,774 | INFO     | all job control threads have been joined
[2025-04-03 13:11:41] 2025-04-03 11:11:23,880 | INFO     | all payload control threads have been joined
[2025-04-03 13:11:41] 2025-04-03 11:11:24,096 | INFO     | [job] retrieve thread has finished
[2025-04-03 13:11:41] 2025-04-03 11:11:24,097 | INFO     | [job] queue monitor thread has finished
[2025-04-03 13:11:41] 2025-04-03 11:11:24,285 | INFO     | [payload] failed_post thread has finished
[2025-04-03 13:11:41] 2025-04-03 11:11:24,313 | INFO     | [data] control thread has finished
[2025-04-03 13:11:41] 2025-04-03 11:11:24,437 | INFO     | [job] job monitor thread has finished
[2025-04-03 13:11:41] 2025-04-03 11:11:24,779 | INFO     | [job] control thread has finished
[2025-04-03 13:11:41] 2025-04-03 11:11:24,803 | INFO     | [job] validate thread has finished
[2025-04-03 13:11:41] 2025-04-03 11:11:24,810 | INFO     | [payload] validate_pre thread has finished
[2025-04-03 13:11:41] 2025-04-03 11:11:24,820 | INFO     | [data] copytool_in thread has finished
[2025-04-03 13:11:41] 2025-04-03 11:11:24,858 | INFO     | [job] create_data_payload thread has finished
[2025-04-03 13:11:41] 2025-04-03 11:11:24,865 | INFO     | [payload] execute_payloads thread has finished
[2025-04-03 13:11:41] 2025-04-03 11:11:24,885 | INFO     | [payload] control thread has finished
[2025-04-03 13:11:41] 2025-04-03 11:11:25,096 | INFO     | [data] copytool_out thread has finished
[2025-04-03 13:11:41] 2025-04-03 11:11:25,405 | INFO     | [payload] validate_post thread has finished
[2025-04-03 13:11:41] 2025-04-03 11:11:27,475 | INFO     | [data] queue_monitor thread has finished
[2025-04-03 13:11:41] 2025-04-03 11:11:33,364 | INFO     | job.realtimelogging is not enabled
[2025-04-03 13:11:41] 2025-04-03 11:11:34,369 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-03 13:11:41] 2025-04-03 11:11:35,230 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139763613124416)>', '<ExcThread(monitor, started 139763126363904)>']
[2025-04-03 13:11:41] 2025-04-03 11:11:36,152 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-03 13:11:41] 2025-04-03 11:11:36,152 | INFO     | [monitor] control thread has ended
[2025-04-03 13:11:41] 2025-04-03 11:11:40,239 | INFO     | all workflow threads have been joined
[2025-04-03 13:11:41] 2025-04-03 11:11:40,239 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-03 13:11:41] 2025-04-03 11:11:40,239 | INFO     | traces error code: 0
[2025-04-03 13:11:41] 2025-04-03 11:11:40,240 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-03 13:11:41] 2025-04-03 11:11:40,294 [wrapper] ==== pilot stdout END ====
[2025-04-03 13:11:41] 2025-04-03 11:11:40,295 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-03 13:11:41] 2025-04-03 11:11:40,297 [wrapper] pilotpid: 357929
[2025-04-03 13:11:41] 2025-04-03 11:11:40,299 [wrapper] Pilot exit status: 0
[2025-04-03 13:11:41] 2025-04-03 11:11:40,842 [wrapper] pandaids: 6584884834
[2025-04-03 13:11:41] 2025-04-03 11:11:40,864 [wrapper] cleanup supervisor_pilot  375669 357930
[2025-04-03 13:11:41] 2025-04-03 11:11:40,866 [wrapper] Test setup, not cleaning
[2025-04-03 13:11:41] 2025-04-03 11:11:40,867 [wrapper] apfmon messages muted
[2025-04-03 13:11:41] 2025-04-03 11:11:40,869 [wrapper] ==== wrapper stdout END ====
[2025-04-03 13:11:41] 2025-04-03 11:11:40,871 [wrapper] ==== wrapper stderr END ====
[2025-04-03 13:11:41]  *** Error codes and diagnostics ***
[2025-04-03 13:11:41]     "exeErrorCode": 0,
[2025-04-03 13:11:41]     "exeErrorDiag": "",
[2025-04-03 13:11:41]     "pilotErrorCode": 0,
[2025-04-03 13:11:41]     "pilotErrorDiag": "",
[2025-04-03 13:11:41]  *** Listing of results directory ***
[2025-04-03 13:11:41] total 408740
[2025-04-03 13:11:41] -rw-r--r-- 1 david david    494584 Apr  2 15:18 pilot3.tar.gz
[2025-04-03 13:11:41] -rw-r--r-- 1 david david      5112 Apr  2 15:21 queuedata.json
[2025-04-03 13:11:41] -rwx------ 1 david david     37140 Apr  2 15:21 runpilot2-wrapper.sh
[2025-04-03 13:11:41] -rw-r--r-- 1 david david       100 Apr  3 12:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-03 13:11:41] -rwxr-xr-x 1 david david      7986 Apr  3 12:01 run_atlas
[2025-04-03 13:11:41] -rw-r--r-- 1 david david       105 Apr  3 12:01 job.xml
[2025-04-03 13:11:41] -rw-r--r-- 2 david david 219590755 Apr  3 12:01 EVNT.44004365._000007.pool.root.1
[2025-04-03 13:11:41] -rw-r--r-- 1 david david      7978 Apr  3 12:01 init_data.xml
[2025-04-03 13:11:41] drwxrwx--x 1 david david        76 Apr  3 12:01 shared
[2025-04-03 13:11:41] -rw-r--r-- 2 david david    507231 Apr  3 12:01 input.tar.gz
[2025-04-03 13:11:41] -rw-r--r-- 2 david david     17571 Apr  3 12:01 start_atlas.sh
[2025-04-03 13:11:41] -rw-r--r-- 1 david david         0 Apr  3 12:01 boinc_lockfile
[2025-04-03 13:11:41] -rw-r--r-- 1 david david      2546 Apr  3 12:01 pandaJob.out
[2025-04-03 13:11:41] -rw------- 1 david david       424 Apr  3 12:01 setup.sh.local
[2025-04-03 13:11:41] -rw------- 1 david david    990847 Apr  3 12:02 agis_schedconf.cvmfs.json
[2025-04-03 13:11:41] -rw------- 1 david david   1603525 Apr  3 12:02 agis_ddmendpoints.agis.ALL.json
[2025-04-03 13:11:41] drwx------ 1 david david       368 Apr  3 12:03 pilot3
[2025-04-03 13:11:41] -rw------- 1 david david 193598616 Apr  3 13:10 HITS.44004367._000167.pool.root.1
[2025-04-03 13:11:41] -rw-r--r-- 1 david david       529 Apr  3 13:10 boinc_task_state.xml
[2025-04-03 13:11:41] -rw------- 1 david david        95 Apr  3 13:11 pilot_heartbeat.json
[2025-04-03 13:11:41] -rw------- 1 david david      1023 Apr  3 13:11 memory_monitor_summary.json
[2025-04-03 13:11:41] -rw------- 1 david david    363497 Apr  3 13:11 log.44004367._000167.job.log.tgz.1
[2025-04-03 13:11:41] -rw------- 1 david david      7668 Apr  3 13:11 heartbeat.json
[2025-04-03 13:11:41] -rw-r--r-- 1 david david      8192 Apr  3 13:11 boinc_mmap_file
[2025-04-03 13:11:41] -rw-r--r-- 1 david david        27 Apr  3 13:11 wrapper_checkpoint.txt
[2025-04-03 13:11:41] -rw------- 1 david david      4604 Apr  3 13:11 pilotlog.txt
[2025-04-03 13:11:41] -rw------- 1 david david    404388 Apr  3 13:11 log.44004367._000167.job.log.1
[2025-04-03 13:11:41] -rw------- 1 david david       357 Apr  3 13:11 output.list
[2025-04-03 13:11:41] -rw-r--r-- 1 david david       620 Apr  3 13:11 runtime_log
[2025-04-03 13:11:41] -rw------- 1 david david    788480 Apr  3 13:11 result.tar.gz
[2025-04-03 13:11:41] -rw-r--r-- 1 david david     11015 Apr  3 13:11 runtime_log.err
[2025-04-03 13:11:41] -rw------- 1 david david       641 Apr  3 13:11 M92NDmbDDK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmnVFLDmuNgTYm.diag
[2025-04-03 13:11:41] -rw-r--r-- 1 david david     21517 Apr  3 13:11 stderr.txt
[2025-04-03 13:11:41] HITS file was successfully produced:
[2025-04-03 13:11:41] -rw------- 1 david david 193598616 Apr  3 13:10 shared/HITS.pool.root.1
[2025-04-03 13:11:41]  *** Contents of shared directory: ***
[2025-04-03 13:11:41] total 404800
[2025-04-03 13:11:41] -rw-r--r-- 2 david david 219590755 Apr  3 12:01 ATLAS.root_0
[2025-04-03 13:11:41] -rw-r--r-- 2 david david    507231 Apr  3 12:01 input.tar.gz
[2025-04-03 13:11:41] -rw-r--r-- 2 david david     17571 Apr  3 12:01 start_atlas.sh
[2025-04-03 13:11:41] -rw------- 1 david david 193598616 Apr  3 13:10 HITS.pool.root.1
[2025-04-03 13:11:41] -rw------- 1 david david    788480 Apr  3 13:11 result.tar.gz
13:11:42 (354156): run_atlas exited; CPU time 24846.762028
13:11:42 (354156): called boinc_finish(0)

</stderr_txt>
]]>

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