Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:01:08 (22318): wrapper (7.7.26015): starting
01:01:08 (22318): wrapper: running run_atlas (--nthreads 8)
[2025-04-04 01:01:08] Arguments: --nthreads 8
[2025-04-04 01:01:08] Threads: 8
[2025-04-04 01:01:08] Checking for CVMFS
[2025-04-04 01:01:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-04 01:01:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-04 01:01:09] Running cvmfs_config stat atlas.cern.ch
[2025-04-04 01:01:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-04 01:01:10] 2.11.2.0 15592 101503 81292 144468 0 110 19890834 25165824 1847 130560 0 33717898 99.854 27716424 5399 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-04-04 01:01:10] CVMFS is ok
[2025-04-04 01:01:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-04 01:01:10] Checking for apptainer binary...
[2025-04-04 01:01:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-04 01:01:10] Running /usr/bin/apptainer --version
[2025-04-04 01:01:10] apptainer version 1.3.2-1.el7
[2025-04-04 01:01:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-04 01:02:13] cg-vwn487.simple-grid.lan
[2025-04-04 01:02:13] apptainer works
[2025-04-04 01:02:13] Set ATHENA_PROC_NUMBER=8
[2025-04-04 01:02:13] Set ATHENA_CORE_NUMBER=8
[2025-04-04 01:02:13] Starting ATLAS job with PandaID=6584884843
[2025-04-04 01:02:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-04 05:00:38]  *** The last 200 lines of the pilot log: ***
[2025-04-04 05:00:39] 2025-04-04 03:00:17,104 | INFO     | sum of square deviations: 3212467674.5
[2025-04-04 05:00:39] 2025-04-04 03:00:17,105 | INFO     | sum of deviations: 137799684694.5
[2025-04-04 05:00:39] 2025-04-04 03:00:17,106 | INFO     | mean x: 1743728552.5
[2025-04-04 05:00:39] 2025-04-04 03:00:17,106 | INFO     | mean y: 2402566.279816514
[2025-04-04 05:00:39] 2025-04-04 03:00:17,106 | INFO     | -- intersect: -74795313418.42523
[2025-04-04 05:00:39] 2025-04-04 03:00:17,106 | INFO     | intersect: -74795313418.42523
[2025-04-04 05:00:39] 2025-04-04 03:00:17,106 | INFO     | chi2: 7.024809168153752
[2025-04-04 05:00:39] 2025-04-04 03:00:17,106 | INFO     | current chi2=7.024809168153752 (change=9.378538915752287 %)
[2025-04-04 05:00:39] 2025-04-04 03:00:17,107 | INFO     | right removable region: 217
[2025-04-04 05:00:39] 2025-04-04 03:00:17,107 | INFO     | model: linear, x: [1743722239.0, 1743722300.0, 1743722361.0, 1743722422.0, 1743722483.0, 1743722544.0, 1743722605.0, 1743722666.0, 1743722727.0, 1743722788.0, 1743
[2025-04-04 05:00:39] 2025-04-04 03:00:17,107 | INFO     | sum of square deviations: 3212467674.5
[2025-04-04 05:00:39] 2025-04-04 03:00:17,109 | INFO     | sum of deviations: 59354736547.99999
[2025-04-04 05:00:39] 2025-04-04 03:00:17,109 | INFO     | mean x: 1743728857.5
[2025-04-04 05:00:39] 2025-04-04 03:00:17,109 | INFO     | mean y: 2439898.6146788993
[2025-04-04 05:00:39] 2025-04-04 03:00:17,109 | INFO     | -- intersect: -32215337036.422157
[2025-04-04 05:00:39] 2025-04-04 03:00:17,109 | INFO     | intersect: -32215337036.422157
[2025-04-04 05:00:39] 2025-04-04 03:00:17,110 | INFO     | chi2: 3.826617307388055
[2025-04-04 05:00:39] 2025-04-04 03:00:17,110 | INFO     | current chi2=3.826617307388055 (change=50.635861686060025 %)
[2025-04-04 05:00:39] 2025-04-04 03:00:17,110 | INFO     | model: linear, x: [1743722544.0, 1743722605.0, 1743722666.0, 1743722727.0, 1743722788.0, 1743722849.0, 1743722910.0, 1743722971.0, 1743723032.0, 1743723093.0, 1743
[2025-04-04 05:00:39] 2025-04-04 03:00:17,110 | INFO     | sum of square deviations: 2996454322.0
[2025-04-04 05:00:39] 2025-04-04 03:00:17,112 | INFO     | sum of deviations: 12256765685.0
[2025-04-04 05:00:39] 2025-04-04 03:00:17,112 | INFO     | mean x: 1743729010.0
[2025-04-04 05:00:39] 2025-04-04 03:00:17,112 | INFO     | mean y: 2473155.352112676
[2025-04-04 05:00:39] 2025-04-04 03:00:17,112 | INFO     | -- intersect: -7130116097.482498
[2025-04-04 05:00:39] 2025-04-04 03:00:17,112 | INFO     | intersect: -7130116097.482498
[2025-04-04 05:00:39] 2025-04-04 03:00:17,113 | INFO     | chi2: 2.0401333475300056
[2025-04-04 05:00:39] 2025-04-04 03:00:17,113 | INFO     | current chi2=2.0401333475300056 (change=46.685723090440284 %)
[2025-04-04 05:00:39] 2025-04-04 03:00:17,113 | INFO     | model: linear, x: [1743722849.0, 1743722910.0, 1743722971.0, 1743723032.0, 1743723093.0, 1743723154.0, 1743723215.0, 1743723276.0, 1743723337.0, 1743723398.0, 1743
[2025-04-04 05:00:39] 2025-04-04 03:00:17,113 | INFO     | sum of square deviations: 2790348132.0
[2025-04-04 05:00:39] 2025-04-04 03:00:17,115 | INFO     | sum of deviations: -24132551386.5
[2025-04-04 05:00:39] 2025-04-04 03:00:17,115 | INFO     | mean x: 1743729162.5
[2025-04-04 05:00:39] 2025-04-04 03:00:17,115 | INFO     | mean y: 2499973.9951923075
[2025-04-04 05:00:39] 2025-04-04 03:00:17,115 | INFO     | -- intersect: 15083282595.914232
[2025-04-04 05:00:39] 2025-04-04 03:00:17,115 | INFO     | intersect: 15083282595.914232
[2025-04-04 05:00:39] 2025-04-04 03:00:17,115 | INFO     | chi2: 0.8542929725982136
[2025-04-04 05:00:39] 2025-04-04 03:00:17,115 | INFO     | current chi2=0.8542929725982136 (change=58.12563067838148 %)
[2025-04-04 05:00:39] 2025-04-04 03:00:17,116 | INFO     | model: linear, x: [1743723154.0, 1743723215.0, 1743723276.0, 1743723337.0, 1743723398.0, 1743723459.0, 1743723520.0, 1743723581.0, 1743723642.0, 1743723703.0, 1743
[2025-04-04 05:00:39] 2025-04-04 03:00:17,116 | INFO     | sum of square deviations: 2593916542.0
[2025-04-04 05:00:39] 2025-04-04 03:00:17,117 | INFO     | sum of deviations: -27708634998.0
[2025-04-04 05:00:39] 2025-04-04 03:00:17,118 | INFO     | mean x: 1743729315.0
[2025-04-04 05:00:39] 2025-04-04 03:00:17,118 | INFO     | mean y: 2502707.773399015
[2025-04-04 05:00:39] 2025-04-04 03:00:17,118 | INFO     | -- intersect: 18629300579.76429
[2025-04-04 05:00:39] 2025-04-04 03:00:17,118 | INFO     | intersect: 18629300579.76429
[2025-04-04 05:00:39] 2025-04-04 03:00:17,118 | INFO     | chi2: 0.8205009019214187
[2025-04-04 05:00:39] 2025-04-04 03:00:17,118 | INFO     | current chi2=0.8205009019214187 (change=3.955559949652987 %)
[2025-04-04 05:00:39] 2025-04-04 03:00:17,118 | INFO     | left removable region: 40
[2025-04-04 05:00:39] 2025-04-04 03:00:17,119 | INFO     | model: linear, x: [1743724374.0, 1743724435.0, 1743724496.0, 1743724557.0, 1743724618.0, 1743724679.0, 1743724740.0, 1743724801.0, 1743724862.0, 1743724923.0, 1743
[2025-04-04 05:00:39] 2025-04-04 03:00:17,119 | INFO     | sum of square deviations: 1719429448.0
[2025-04-04 05:00:39] 2025-04-04 03:00:17,120 | INFO     | sum of deviations: -7194594492.000003
[2025-04-04 05:00:39] 2025-04-04 03:00:17,120 | INFO     | mean x: 1743729742.0
[2025-04-04 05:00:39] 2025-04-04 03:00:17,120 | INFO     | mean y: 2507614.9096045196
[2025-04-04 05:00:39] 2025-04-04 03:00:17,121 | INFO     | -- intersect: 7298781627.153801
[2025-04-04 05:00:39] 2025-04-04 03:00:17,121 | INFO     | intersect: 7298781627.153801
[2025-04-04 05:00:39] 2025-04-04 03:00:17,121 | INFO     | chi2: 0.022611946125841328
[2025-04-04 05:00:39] 2025-04-04 03:00:17,121 | INFO     | -- intersect: 7298781627.153801
[2025-04-04 05:00:39] 2025-04-04 03:00:17,121 | INFO     | current memory leak: -4.18 B/s (using 177 data points, chi2=0.02)
[2025-04-04 05:00:39] 2025-04-04 03:00:17,122 | INFO     | ..............................
[2025-04-04 05:00:39] 2025-04-04 03:00:17,122 | INFO     | . Timing measurements:
[2025-04-04 05:00:39] 2025-04-04 03:00:17,122 | INFO     | . get job = 0 s
[2025-04-04 05:00:39] 2025-04-04 03:00:17,122 | INFO     | . initial setup = 14 s
[2025-04-04 05:00:39] 2025-04-04 03:00:17,122 | INFO     | . payload setup = 118 s
[2025-04-04 05:00:39] 2025-04-04 03:00:17,122 | INFO     | . stage-in = 0 s
[2025-04-04 05:00:39] 2025-04-04 03:00:17,123 | INFO     | . payload execution = 13709 s
[2025-04-04 05:00:39] 2025-04-04 03:00:17,123 | INFO     | . stage-out = 3 s
[2025-04-04 05:00:39] 2025-04-04 03:00:17,123 | INFO     | . log creation = 1 s
[2025-04-04 05:00:39] 2025-04-04 03:00:17,123 | INFO     | ..............................
[2025-04-04 05:00:39] 2025-04-04 03:00:17,589 | INFO     | 
[2025-04-04 05:00:39] 2025-04-04 03:00:17,590 | INFO     | job summary report
[2025-04-04 05:00:39] 2025-04-04 03:00:17,590 | INFO     | --------------------------------------------------
[2025-04-04 05:00:39] 2025-04-04 03:00:17,590 | INFO     | PanDA job id: 6584884843
[2025-04-04 05:00:39] 2025-04-04 03:00:17,590 | INFO     | task id: 44004367
[2025-04-04 05:00:39] 2025-04-04 03:00:17,590 | INFO     | errors: (none)
[2025-04-04 05:00:39] 2025-04-04 03:00:17,590 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-04 05:00:39] 2025-04-04 03:00:17,590 | INFO     | pilot state: finished 
[2025-04-04 05:00:39] 2025-04-04 03:00:17,590 | INFO     | transexitcode: 0
[2025-04-04 05:00:39] 2025-04-04 03:00:17,590 | INFO     | exeerrorcode: 0
[2025-04-04 05:00:39] 2025-04-04 03:00:17,590 | INFO     | exeerrordiag: 
[2025-04-04 05:00:39] 2025-04-04 03:00:17,590 | INFO     | exitcode: 0
[2025-04-04 05:00:39] 2025-04-04 03:00:17,591 | INFO     | exitmsg: OK
[2025-04-04 05:00:39] 2025-04-04 03:00:17,591 | INFO     | cpuconsumptiontime: 47353 s
[2025-04-04 05:00:39] 2025-04-04 03:00:17,591 | INFO     | nevents: 400
[2025-04-04 05:00:39] 2025-04-04 03:00:17,591 | INFO     | neventsw: 0
[2025-04-04 05:00:39] 2025-04-04 03:00:17,591 | INFO     | pid: 2458
[2025-04-04 05:00:39] 2025-04-04 03:00:17,591 | INFO     | pgrp: 2458
[2025-04-04 05:00:39] 2025-04-04 03:00:17,591 | INFO     | corecount: 8
[2025-04-04 05:00:39] 2025-04-04 03:00:17,591 | INFO     | event service: False
[2025-04-04 05:00:39] 2025-04-04 03:00:17,591 | INFO     | sizes: {0: 2417139, 1: 2417338, 12: 2417338, 22: 2417366, 33: 2417394, 44: 2417450, 55: 2417606, 65: 2417634, 74: 2417868, 76: 2417896, 13832: 2448229, 13836: 2457
[2025-04-04 05:00:39] 2025-04-04 03:00:17,591 | INFO     | --------------------------------------------------
[2025-04-04 05:00:39] 2025-04-04 03:00:17,591 | INFO     | 
[2025-04-04 05:00:39] 2025-04-04 03:00:17,592 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-04-04 05:00:39] 2025-04-04 03:00:17,803 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,803 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,803 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,803 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,803 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,804 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,804 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,804 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,804 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,805 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-04 05:00:39] 2025-04-04 03:00:17,805 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,805 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-04 05:00:39] 2025-04-04 03:00:17,805 | INFO     | job 6584884843 has completed (purged errors)
[2025-04-04 05:00:39] 2025-04-04 03:00:17,805 | INFO     | overall cleanup function is called
[2025-04-04 05:00:39] 2025-04-04 03:00:18,812 | INFO     | --- collectZombieJob: --- 10, [2458]
[2025-04-04 05:00:39] 2025-04-04 03:00:18,813 | INFO     | zombie collector waiting for pid 2458
[2025-04-04 05:00:39] 2025-04-04 03:00:18,813 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-04 05:00:39] 2025-04-04 03:00:18,813 | INFO     | collected zombie processes
[2025-04-04 05:00:39] 2025-04-04 03:00:18,813 | INFO     | will attempt to kill all subprocesses of pid=2458
[2025-04-04 05:00:39] 2025-04-04 03:00:19,572 | INFO     | process IDs to be killed: [2458] (in reverse order)
[2025-04-04 05:00:39] 2025-04-04 03:00:20,372 | WARNING  | found no corresponding commands to process id(s)
[2025-04-04 05:00:39] 2025-04-04 03:00:20,372 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-04 05:00:39] 2025-04-04 03:00:20,376 | INFO     | did not find any defunct processes belonging to 2458
[2025-04-04 05:00:39] 2025-04-04 03:00:20,378 | INFO     | did not find any defunct processes belonging to 2458
[2025-04-04 05:00:39] 2025-04-04 03:00:20,378 | INFO     | ready for new job
[2025-04-04 05:00:39] 2025-04-04 03:00:20,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-04 05:00:39] 2025-04-04 03:00:20,380 | INFO     | ***************************************
[2025-04-04 05:00:39] 2025-04-04 03:00:20,380 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-04 05:00:39] 2025-04-04 03:00:20,380 | INFO     | ***************************************
[2025-04-04 05:00:39] 2025-04-04 03:00:20,380 | INFO     | 
[2025-04-04 05:00:39] 2025-04-04 03:00:20,381 | INFO     | pilot is running in a VM
[2025-04-04 05:00:39] 2025-04-04 03:00:20,381 | INFO     | architecture information:
[2025-04-04 05:00:39] 2025-04-04 03:00:20,389 | INFO     | executing command: cat /etc/os-release
[2025-04-04 05:00:39] 2025-04-04 03:00:20,644 | INFO     | cat /etc/os-release:
[2025-04-04 05:00:39] NAME="CentOS Linux"
[2025-04-04 05:00:39] VERSION="7 (Core)"
[2025-04-04 05:00:39] ID="centos"
[2025-04-04 05:00:39] ID_LIKE="rhel fedora"
[2025-04-04 05:00:39] VERSION_ID="7"
[2025-04-04 05:00:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-04 05:00:39] ANSI_COLOR="0;31"
[2025-04-04 05:00:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-04 05:00:39] HOME_URL="https://www.centos.org/"
[2025-04-04 05:00:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-04 05:00:39] 
[2025-04-04 05:00:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-04 05:00:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-04 05:00:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-04 05:00:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-04 05:00:39] 
[2025-04-04 05:00:39] 2025-04-04 03:00:20,644 | INFO     | ***************************************
[2025-04-04 05:00:39] 2025-04-04 03:00:20,989 | INFO     | PID=26112 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-04 05:00:39] 2025-04-04 03:00:20,989 | INFO     | .. there are 9 such processes running
[2025-04-04 05:00:39] 2025-04-04 03:00:21,148 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-04-04 05:00:39] 2025-04-04 03:00:21,324 | INFO     | sufficient remaining disk space (387686858752 B)
[2025-04-04 05:00:39] 2025-04-04 03:00:21,325 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-04 05:00:39] 2025-04-04 03:00:21,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-04 05:00:39] 2025-04-04 03:00:21,325 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-04 05:00:39] 2025-04-04 03:00:21,325 | INFO     | found 0 job(s) in 20 queues
[2025-04-04 05:00:39] 2025-04-04 03:00:21,326 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-04 05:00:39] 2025-04-04 03:00:21,326 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-04 05:00:39] 2025-04-04 03:00:21,329 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-04 05:00:39] 2025-04-04 03:00:21,330 | INFO     | aborting loop
[2025-04-04 05:00:39] 2025-04-04 03:00:21,566 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-04 05:00:39] 2025-04-04 03:00:21,981 | INFO     | all data control threads have been joined
[2025-04-04 05:00:39] 2025-04-04 03:00:22,195 | INFO     | all payload control threads have been joined
[2025-04-04 05:00:39] 2025-04-04 03:00:22,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-04 05:00:39] 2025-04-04 03:00:22,331 | INFO     | [job] retrieve thread has finished
[2025-04-04 05:00:39] 2025-04-04 03:00:22,336 | INFO     | [job] job monitor thread has finished
[2025-04-04 05:00:39] 2025-04-04 03:00:22,518 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-04 05:00:39] 2025-04-04 03:00:22,593 | INFO     | all job control threads have been joined
[2025-04-04 05:00:39] 2025-04-04 03:00:22,604 | INFO     | [data] copytool_in thread has finished
[2025-04-04 05:00:39] 2025-04-04 03:00:22,988 | INFO     | [data] control thread has finished
[2025-04-04 05:00:39] 2025-04-04 03:00:23,124 | INFO     | [payload] execute_payloads thread has finished
[2025-04-04 05:00:39] 2025-04-04 03:00:23,201 | INFO     | [payload] control thread has finished
[2025-04-04 05:00:39] 2025-04-04 03:00:23,254 | INFO     | [job] queue monitor thread has finished
[2025-04-04 05:00:39] 2025-04-04 03:00:23,473 | INFO     | [job] validate thread has finished
[2025-04-04 05:00:39] 2025-04-04 03:00:23,490 | INFO     | [payload] failed_post thread has finished
[2025-04-04 05:00:39] 2025-04-04 03:00:23,573 | INFO     | [data] copytool_out thread has finished
[2025-04-04 05:00:39] 2025-04-04 03:00:23,586 | INFO     | [payload] validate_pre thread has finished
[2025-04-04 05:00:39] 2025-04-04 03:00:23,594 | INFO     | [payload] validate_post thread has finished
[2025-04-04 05:00:39] 2025-04-04 03:00:23,599 | INFO     | [job] control thread has finished
[2025-04-04 05:00:39] 2025-04-04 03:00:23,787 | INFO     | [job] create_data_payload thread has finished
[2025-04-04 05:00:39] 2025-04-04 03:00:24,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-04 05:00:39] 2025-04-04 03:00:28,530 | INFO     | [data] queue_monitor thread has finished
[2025-04-04 05:00:39] 2025-04-04 03:00:29,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140099939288896)>', '<ExcThread(monitor, started 140099274663680)>']
[2025-04-04 05:00:39] 2025-04-04 03:00:29,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-04 05:00:39] 2025-04-04 03:00:29,373 | INFO     | [monitor] control thread has ended
[2025-04-04 05:00:39] 2025-04-04 03:00:34,236 | INFO     | all workflow threads have been joined
[2025-04-04 05:00:39] 2025-04-04 03:00:34,237 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-04 05:00:39] 2025-04-04 03:00:34,237 | INFO     | traces error code: 0
[2025-04-04 05:00:39] 2025-04-04 03:00:34,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-04 05:00:39] 2025-04-04 03:00:34,564 [wrapper] ==== pilot stdout END ====
[2025-04-04 05:00:39] 2025-04-04 03:00:34,657 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-04 05:00:39] 2025-04-04 03:00:34,712 [wrapper] pilotpid: 26112
[2025-04-04 05:00:39] 2025-04-04 03:00:34,780 [wrapper] Pilot exit status: 0
[2025-04-04 05:00:39] 2025-04-04 03:00:35,115 [wrapper] pandaids: 6584884843
[2025-04-04 05:00:39] 2025-04-04 03:00:35,952 [wrapper] cleanup supervisor_pilot   611 26113
[2025-04-04 05:00:39] 2025-04-04 03:00:36,021 [wrapper] Test setup, not cleaning
[2025-04-04 05:00:39] 2025-04-04 03:00:36,124 [wrapper] apfmon messages muted
[2025-04-04 05:00:39] 2025-04-04 03:00:36,244 [wrapper] ==== wrapper stdout END ====
[2025-04-04 05:00:39] 2025-04-04 03:00:36,341 [wrapper] ==== wrapper stderr END ====
[2025-04-04 05:00:39]  *** Error codes and diagnostics ***
[2025-04-04 05:00:39]     "exeErrorCode": 0,
[2025-04-04 05:00:39]     "exeErrorDiag": "",
[2025-04-04 05:00:39]     "pilotErrorCode": 0,
[2025-04-04 05:00:39]     "pilotErrorDiag": "",
[2025-04-04 05:00:39]  *** Listing of results directory ***
[2025-04-04 05:00:39] total 412752
[2025-04-04 05:00:39] -rw-r--r--. 1 boinc boinc      5112 Apr  2 15:15 queuedata.json
[2025-04-04 05:00:39] -rwx------. 1 boinc boinc     37140 Apr  2 15:18 runpilot2-wrapper.sh
[2025-04-04 05:00:39] -rw-r--r--. 1 boinc boinc    494584 Apr  2 15:18 pilot3.tar.gz
[2025-04-04 05:00:39] -rw-r--r--. 1 boinc boinc       100 Apr  4 01:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-04 05:00:39] -rwxr-xr-x. 1 boinc boinc      7986 Apr  4 01:01 run_atlas
[2025-04-04 05:00:39] -rw-r--r--. 1 boinc boinc       105 Apr  4 01:01 job.xml
[2025-04-04 05:00:39] -rw-r--r--. 1 boinc boinc      6314 Apr  4 01:01 init_data.xml
[2025-04-04 05:00:39] -rw-r--r--. 2 boinc boinc 223926572 Apr  4 01:01 EVNT.44004365._000008.pool.root.1
[2025-04-04 05:00:39] -rw-r--r--. 2 boinc boinc     17571 Apr  4 01:01 start_atlas.sh
[2025-04-04 05:00:39] drwxrwx--x. 2 boinc boinc        68 Apr  4 01:01 shared
[2025-04-04 05:00:39] -rw-r--r--. 2 boinc boinc    507224 Apr  4 01:01 input.tar.gz
[2025-04-04 05:00:39] -rw-r--r--. 1 boinc boinc         0 Apr  4 01:01 boinc_lockfile
[2025-04-04 05:00:39] -rw-r--r--. 1 boinc boinc      2543 Apr  4 01:02 pandaJob.out
[2025-04-04 05:00:39] -rw-------. 1 boinc boinc       424 Apr  4 01:02 setup.sh.local
[2025-04-04 05:00:39] -rw-------. 1 boinc boinc    980050 Apr  4 01:05 agis_schedconf.cvmfs.json
[2025-04-04 05:00:39] drwx------. 4 boinc boinc      4096 Apr  4 01:05 pilot3
[2025-04-04 05:00:39] -rw-------. 1 boinc boinc 191529733 Apr  4 04:57 HITS.44004367._000176.pool.root.1
[2025-04-04 05:00:39] -rw-r--r--. 1 boinc boinc       531 Apr  4 04:57 boinc_task_state.xml
[2025-04-04 05:00:39] -rw-------. 1 boinc boinc      1016 Apr  4 04:58 memory_monitor_summary.json
[2025-04-04 05:00:39] -rw-------. 1 boinc boinc   1603525 Apr  4 04:58 agis_ddmendpoints.agis.ALL.json
[2025-04-04 05:00:39] -rw-------. 1 boinc boinc    377278 Apr  4 04:58 log.44004367._000176.job.log.tgz.1
[2025-04-04 05:00:39] -rw-------. 1 boinc boinc        95 Apr  4 04:59 pilot_heartbeat.json
[2025-04-04 05:00:39] -rw-------. 1 boinc boinc      7683 Apr  4 05:00 heartbeat.json
[2025-04-04 05:00:39] -rw-r--r--. 1 boinc boinc      8192 Apr  4 05:00 boinc_mmap_file
[2025-04-04 05:00:39] -rw-r--r--. 1 boinc boinc        28 Apr  4 05:00 wrapper_checkpoint.txt
[2025-04-04 05:00:39] -rw-------. 1 boinc boinc      4797 Apr  4 05:00 pilotlog.txt
[2025-04-04 05:00:39] -rw-------. 1 boinc boinc   1314127 Apr  4 05:00 log.44004367._000176.job.log.1
[2025-04-04 05:00:39] -rw-------. 1 boinc boinc       357 Apr  4 05:00 output.list
[2025-04-04 05:00:39] -rw-r--r--. 1 boinc boinc       620 Apr  4 05:00 runtime_log
[2025-04-04 05:00:39] -rw-------. 1 boinc boinc   1710080 Apr  4 05:00 result.tar.gz
[2025-04-04 05:00:39] -rw-r--r--. 1 boinc boinc     11014 Apr  4 05:00 runtime_log.err
[2025-04-04 05:00:39] -rw-------. 1 boinc boinc       657 Apr  4 05:00 9J0NDmVADK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmVSFLDmJxzWUo.diag
[2025-04-04 05:00:39] -rw-r--r--. 1 boinc boinc     21284 Apr  4 05:00 stderr.txt
[2025-04-04 05:00:39] HITS file was successfully produced:
[2025-04-04 05:00:39] -rw-------. 1 boinc boinc 191529733 Apr  4 04:57 shared/HITS.pool.root.1
[2025-04-04 05:00:39]  *** Contents of shared directory: ***
[2025-04-04 05:00:39] total 407912
[2025-04-04 05:00:39] -rw-r--r--. 2 boinc boinc 223926572 Apr  4 01:01 ATLAS.root_0
[2025-04-04 05:00:39] -rw-r--r--. 2 boinc boinc     17571 Apr  4 01:01 start_atlas.sh
[2025-04-04 05:00:39] -rw-r--r--. 2 boinc boinc    507224 Apr  4 01:01 input.tar.gz
[2025-04-04 05:00:39] -rw-------. 1 boinc boinc 191529733 Apr  4 04:57 HITS.pool.root.1
[2025-04-04 05:00:39] -rw-------. 1 boinc boinc   1710080 Apr  4 05:00 result.tar.gz
05:00:40 (22318): run_atlas exited; CPU time 47370.722711
05:00:40 (22318): called boinc_finish(0)

</stderr_txt>
]]>

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