Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:15:43 (33244): wrapper (7.7.26015): starting
04:15:43 (33244): wrapper: running run_atlas (--nthreads 8)
[2025-04-03 04:15:43] Arguments: --nthreads 8
[2025-04-03 04:15:43] Threads: 8
[2025-04-03 04:15:43] Checking for CVMFS
[2025-04-03 04:15:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 04:15:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 04:15:43] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 04:15:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 04:15:44] 2.11.2.0 44558 19198 382964 144437 0 448 14653165 18432001 16045 130560 0 82580007 99.045 184643735 35919 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-03 04:15:44] CVMFS is ok
[2025-04-03 04:15:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-03 04:15:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-03 04:15:44] Further information can be found at the LHC@home message board.
[2025-04-03 04:15:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 04:15:44] Checking for apptainer binary...
[2025-04-03 04:15:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 04:15:44] Running /usr/bin/apptainer --version
[2025-04-03 04:15:44] apptainer version 1.3.2-1.el7
[2025-04-03 04:15:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 04:15:45] c-211-12.aglt2.org
[2025-04-03 04:15:45] apptainer works
[2025-04-03 04:15:45] Set ATHENA_PROC_NUMBER=8
[2025-04-03 04:15:45] Set ATHENA_CORE_NUMBER=8
[2025-04-03 04:15:45] Starting ATLAS job with PandaID=6583913629
[2025-04-03 04:15:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-03 23:12:13]  *** The last 200 lines of the pilot log: ***
[2025-04-03 23:12:14] 2025-04-04 03:11:35,952 | INFO     | intersect: -936873894.9890276
[2025-04-03 23:12:14] 2025-04-04 03:11:35,953 | INFO     | chi2: 11.267851587450233
[2025-04-03 23:12:14] 2025-04-04 03:11:35,955 | INFO     | model: linear, x: [1743668193.0, 1743668254.0, 1743668315.0, 1743668376.0, 1743668437.0, 1743668498.0, 1743668559.0, 1743668620.0, 1743668681.0, 1743668742.0, 1743
[2025-04-03 23:12:14] 2025-04-04 03:11:35,956 | INFO     | sum of square deviations: 424086309074.24176
[2025-04-03 23:12:14] 2025-04-04 03:11:36,236 | INFO     | sum of deviations: 611216951044.0277
[2025-04-03 23:12:14] 2025-04-04 03:11:36,236 | INFO     | mean x: 1743702018.2261262
[2025-04-03 23:12:14] 2025-04-04 03:11:36,237 | INFO     | mean y: 2545002.736936937
[2025-04-03 23:12:14] 2025-04-04 03:11:36,237 | INFO     | -- intersect: -2510576049.0509243
[2025-04-03 23:12:14] 2025-04-04 03:11:36,237 | INFO     | intersect: -2510576049.0509243
[2025-04-03 23:12:14] 2025-04-04 03:11:36,239 | INFO     | chi2: 7.296188475188111
[2025-04-03 23:12:14] 2025-04-04 03:11:36,239 | INFO     | current chi2=7.296188475188111 (change=35.24774072002893 %)
[2025-04-03 23:12:14] 2025-04-04 03:11:36,273 | INFO     | model: linear, x: [1743668193.0, 1743668254.0, 1743668315.0, 1743668376.0, 1743668437.0, 1743668498.0, 1743668559.0, 1743668620.0, 1743668681.0, 1743668742.0, 1743
[2025-04-03 23:12:14] 2025-04-04 03:11:36,274 | INFO     | sum of square deviations: 418381527004.09424
[2025-04-03 23:12:14] 2025-04-04 03:11:37,165 | INFO     | sum of deviations: 880547948927.6709
[2025-04-03 23:12:14] 2025-04-04 03:11:37,166 | INFO     | mean x: 1743701865.7294118
[2025-04-03 23:12:14] 2025-04-04 03:11:37,166 | INFO     | mean y: 2552193.139366516
[2025-04-03 23:12:14] 2025-04-04 03:11:37,166 | INFO     | -- intersect: -3667335223.745465
[2025-04-03 23:12:14] 2025-04-04 03:11:37,166 | INFO     | intersect: -3667335223.745465
[2025-04-03 23:12:14] 2025-04-04 03:11:37,246 | INFO     | chi2: 4.68159554183251
[2025-04-03 23:12:14] 2025-04-04 03:11:37,247 | INFO     | current chi2=4.68159554183251 (change=35.83505198977458 %)
[2025-04-03 23:12:14] 2025-04-04 03:11:37,268 | INFO     | model: linear, x: [1743668193.0, 1743668254.0, 1743668315.0, 1743668376.0, 1743668437.0, 1743668498.0, 1743668559.0, 1743668620.0, 1743668681.0, 1743668742.0, 1743
[2025-04-03 23:12:14] 2025-04-04 03:11:37,269 | INFO     | sum of square deviations: 412727737303.18146
[2025-04-03 23:12:14] 2025-04-04 03:11:37,301 | INFO     | monitor loop #3502: job 0:6583913629 is in state 'finished'
[2025-04-03 23:12:14] 2025-04-04 03:11:37,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-03 23:12:14] 2025-04-04 03:11:37,877 | INFO     | sum of deviations: 875362529352.4998
[2025-04-03 23:12:14] 2025-04-04 03:11:37,878 | INFO     | mean x: 1743701713.2272727
[2025-04-03 23:12:14] 2025-04-04 03:11:37,897 | INFO     | mean y: 2552053.27
[2025-04-03 23:12:14] 2025-04-04 03:11:37,897 | INFO     | -- intersect: -3695699855.119843
[2025-04-03 23:12:14] 2025-04-04 03:11:37,898 | INFO     | intersect: -3695699855.119843
[2025-04-03 23:12:14] 2025-04-04 03:11:37,918 | INFO     | chi2: 4.681608576679563
[2025-04-03 23:12:14] 2025-04-04 03:11:37,919 | INFO     | current chi2=4.681608576679563 (change=-0.0002784274492918181 %)
[2025-04-03 23:12:14] 2025-04-04 03:11:37,929 | INFO     | right removable region: 1099
[2025-04-03 23:12:14] 2025-04-04 03:11:37,942 | INFO     | model: linear, x: [1743668498.0, 1743668559.0, 1743668620.0, 1743668681.0, 1743668742.0, 1743668803.0, 1743668864.0, 1743668925.0, 1743668986.0, 1743669047.0, 1743
[2025-04-03 23:12:14] 2025-04-04 03:11:37,942 | INFO     | sum of square deviations: 424085952223.33466
[2025-04-03 23:12:14] 2025-04-04 03:11:38,276 | INFO     | sum of deviations: -61032309763.030716
[2025-04-03 23:12:14] 2025-04-04 03:11:38,277 | INFO     | mean x: 1743702323.227928
[2025-04-03 23:12:14] 2025-04-04 03:11:38,277 | INFO     | mean y: 2542692.917117117
[2025-04-03 23:12:14] 2025-04-04 03:11:38,277 | INFO     | -- intersect: 253487530.32054642
[2025-04-03 23:12:14] 2025-04-04 03:11:38,309 | INFO     | intersect: 253487530.32054642
[2025-04-03 23:12:14] 2025-04-04 03:11:38,331 | INFO     | chi2: 8.831495385740059
[2025-04-03 23:12:14] 2025-04-04 03:11:38,367 | INFO     | current chi2=8.831495385740059 (change=21.62218931267881 %)
[2025-04-03 23:12:14] 2025-04-04 03:11:38,367 | INFO     | left removable region: 10
[2025-04-03 23:12:14] 2025-04-04 03:11:38,369 | INFO     | model: linear, x: [1743668803.0, 1743668864.0, 1743668925.0, 1743668986.0, 1743669047.0, 1743669108.0, 1743669169.0, 1743669230.0, 1743669291.0, 1743669352.0, 1743
[2025-04-03 23:12:14] 2025-04-04 03:11:38,444 | INFO     | sum of square deviations: 400468878087.7046
[2025-04-03 23:12:14] 2025-04-04 03:11:38,529 | INFO     | sum of deviations: 358960701279.22156
[2025-04-03 23:12:14] 2025-04-04 03:11:38,529 | INFO     | mean x: 1743701987.7318642
[2025-04-03 23:12:14] 2025-04-04 03:11:38,529 | INFO     | mean y: 2566130.846648301
[2025-04-03 23:12:14] 2025-04-04 03:11:38,529 | INFO     | -- intersect: -1560402985.0733235
[2025-04-03 23:12:14] 2025-04-04 03:11:38,530 | INFO     | intersect: -1560402985.0733235
[2025-04-03 23:12:14] 2025-04-04 03:11:38,531 | INFO     | chi2: 0.8280284358616333
[2025-04-03 23:12:14] 2025-04-04 03:11:38,532 | INFO     | -- intersect: -1560402985.0733235
[2025-04-03 23:12:14] 2025-04-04 03:11:38,532 | INFO     | current memory leak: 0.90 B/s (using 1089 data points, chi2=0.83)
[2025-04-03 23:12:14] 2025-04-04 03:11:38,534 | INFO     | ..............................
[2025-04-03 23:12:14] 2025-04-04 03:11:38,534 | INFO     | . Timing measurements:
[2025-04-03 23:12:14] 2025-04-04 03:11:38,534 | INFO     | . get job = 0 s
[2025-04-03 23:12:14] 2025-04-04 03:11:38,534 | INFO     | . initial setup = 2 s
[2025-04-03 23:12:14] 2025-04-04 03:11:38,534 | INFO     | . payload setup = 9 s
[2025-04-03 23:12:14] 2025-04-04 03:11:38,534 | INFO     | . stage-in = 0 s
[2025-04-03 23:12:14] 2025-04-04 03:11:38,534 | INFO     | . payload execution = 67980 s
[2025-04-03 23:12:14] 2025-04-04 03:11:38,534 | INFO     | . stage-out = 15 s
[2025-04-03 23:12:14] 2025-04-04 03:11:38,535 | INFO     | . log creation = 5 s
[2025-04-03 23:12:14] 2025-04-04 03:11:38,535 | INFO     | ..............................
[2025-04-03 23:12:14] 2025-04-04 03:11:41,429 | INFO     | 
[2025-04-03 23:12:14] 2025-04-04 03:11:41,429 | INFO     | job summary report
[2025-04-03 23:12:14] 2025-04-04 03:11:41,430 | INFO     | --------------------------------------------------
[2025-04-03 23:12:14] 2025-04-04 03:11:41,430 | INFO     | PanDA job id: 6583913629
[2025-04-03 23:12:14] 2025-04-04 03:11:41,430 | INFO     | task id: 43634898
[2025-04-03 23:12:14] 2025-04-04 03:11:41,476 | INFO     | errors: (none)
[2025-04-03 23:12:14] 2025-04-04 03:11:41,476 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-03 23:12:14] 2025-04-04 03:11:41,476 | INFO     | pilot state: finished 
[2025-04-03 23:12:14] 2025-04-04 03:11:41,477 | INFO     | transexitcode: 0
[2025-04-03 23:12:14] 2025-04-04 03:11:41,477 | INFO     | exeerrorcode: 0
[2025-04-03 23:12:14] 2025-04-04 03:11:41,477 | INFO     | exeerrordiag: 
[2025-04-03 23:12:14] 2025-04-04 03:11:41,564 | INFO     | exitcode: 0
[2025-04-03 23:12:14] 2025-04-04 03:11:41,564 | INFO     | exitmsg: OK
[2025-04-03 23:12:14] 2025-04-04 03:11:41,564 | INFO     | cpuconsumptiontime: 117449 s
[2025-04-03 23:12:14] 2025-04-04 03:11:41,565 | INFO     | nevents: 400
[2025-04-03 23:12:14] 2025-04-04 03:11:41,565 | INFO     | neventsw: 0
[2025-04-03 23:12:14] 2025-04-04 03:11:41,692 | INFO     | pid: 10405
[2025-04-03 23:12:14] 2025-04-04 03:11:41,692 | INFO     | pgrp: 10405
[2025-04-03 23:12:14] 2025-04-04 03:11:41,692 | INFO     | corecount: 8
[2025-04-03 23:12:14] 2025-04-04 03:11:41,693 | INFO     | event service: False
[2025-04-03 23:12:14] 2025-04-04 03:11:41,693 | INFO     | sizes: {0: 2417080, 1: 2417279, 5: 2417485, 11: 2417541, 67994: 2470306, 67995: 2470305, 68012: 2479519, 68015: 2479575, 68126: 2479745}
[2025-04-03 23:12:14] 2025-04-04 03:11:41,742 | INFO     | --------------------------------------------------
[2025-04-03 23:12:14] 2025-04-04 03:11:41,742 | INFO     | 
[2025-04-03 23:12:14] 2025-04-04 03:11:41,742 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-03 23:12:14] 2025-04-04 03:11:42,289 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,293 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,293 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,293 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,294 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,294 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,294 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,294 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,294 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,294 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,294 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,294 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,295 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,295 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,295 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,295 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,295 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-03 23:12:14] 2025-04-04 03:11:42,295 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,295 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-03 23:12:14] 2025-04-04 03:11:42,296 | INFO     | job 6583913629 has completed (purged errors)
[2025-04-03 23:12:14] 2025-04-04 03:11:42,296 | INFO     | overall cleanup function is called
[2025-04-03 23:12:14] 2025-04-04 03:11:42,561 | INFO     | PID=38548 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-03 23:12:14] 2025-04-04 03:11:42,562 | INFO     | .. there are 41 such processes running
[2025-04-03 23:12:14] 2025-04-04 03:11:43,313 | INFO     | --- collectZombieJob: --- 10, [10405]
[2025-04-03 23:12:14] 2025-04-04 03:11:43,313 | INFO     | zombie collector waiting for pid 10405
[2025-04-03 23:12:14] 2025-04-04 03:11:43,313 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-03 23:12:14] 2025-04-04 03:11:43,314 | INFO     | collected zombie processes
[2025-04-03 23:12:14] 2025-04-04 03:11:43,314 | INFO     | will attempt to kill all subprocesses of pid=10405
[2025-04-03 23:12:14] 2025-04-04 03:11:43,314 | INFO     | killing group process 26021
[2025-04-03 23:12:14] 2025-04-04 03:11:43,314 | WARNING  | exception thrown when killing child group process under SIGTERM: [Errno 1] Operation not permitted
[2025-04-03 23:12:14] 2025-04-04 03:11:43,314 | WARNING  | exception thrown when killing child group process with SIGKILL: [Errno 1] Operation not permitted
[2025-04-03 23:12:14] 2025-04-04 03:11:53,240 | INFO     | process IDs to be killed: [10405] (in reverse order)
[2025-04-03 23:12:14] 2025-04-04 03:11:56,111 | WARNING  | found no corresponding commands to process id(s)
[2025-04-03 23:12:14] 2025-04-04 03:11:56,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-03 23:12:14] 2025-04-04 03:11:56,226 | INFO     | did not find any defunct processes belonging to 10405
[2025-04-03 23:12:14] 2025-04-04 03:11:56,396 | INFO     | did not find any defunct processes belonging to 10405
[2025-04-03 23:12:14] 2025-04-04 03:11:56,396 | INFO     | ready for new job
[2025-04-03 23:12:14] 2025-04-04 03:11:56,396 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-03 23:12:14] 2025-04-04 03:11:56,459 | INFO     | ***************************************
[2025-04-03 23:12:14] 2025-04-04 03:11:56,479 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-03 23:12:14] 2025-04-04 03:11:56,479 | INFO     | ***************************************
[2025-04-03 23:12:14] 2025-04-04 03:11:56,479 | INFO     | 
[2025-04-03 23:12:14] 2025-04-04 03:11:56,510 | INFO     | architecture information:
[2025-04-03 23:12:14] 2025-04-04 03:11:56,527 | INFO     | executing command: cat /etc/os-release
[2025-04-03 23:12:14] 2025-04-04 03:11:56,788 | INFO     | cat /etc/os-release:
[2025-04-03 23:12:14] NAME="CentOS Linux"
[2025-04-03 23:12:14] VERSION="7 (Core)"
[2025-04-03 23:12:14] ID="centos"
[2025-04-03 23:12:14] ID_LIKE="rhel fedora"
[2025-04-03 23:12:14] VERSION_ID="7"
[2025-04-03 23:12:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-03 23:12:14] ANSI_COLOR="0;31"
[2025-04-03 23:12:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-03 23:12:14] HOME_URL="https://www.centos.org/"
[2025-04-03 23:12:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-03 23:12:14] 
[2025-04-03 23:12:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-03 23:12:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-03 23:12:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-03 23:12:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-03 23:12:14] 
[2025-04-03 23:12:14] 2025-04-04 03:11:56,788 | INFO     | ***************************************
[2025-04-03 23:12:14] 2025-04-04 03:11:57,291 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-03 23:12:14] 2025-04-04 03:11:57,531 | INFO     | sufficient remaining disk space (55784243200 B)
[2025-04-03 23:12:14] 2025-04-04 03:11:57,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-03 23:12:14] 2025-04-04 03:11:57,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-03 23:12:14] 2025-04-04 03:11:57,538 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-03 23:12:14] 2025-04-04 03:11:57,539 | INFO     | found 0 job(s) in 20 queues
[2025-04-03 23:12:14] 2025-04-04 03:11:57,539 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-03 23:12:14] 2025-04-04 03:11:57,539 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-03 23:12:14] 2025-04-04 03:11:57,665 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-03 23:12:14] 2025-04-04 03:11:57,665 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-03 23:12:14] 2025-04-04 03:11:57,666 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-03 23:12:14] 2025-04-04 03:11:57,666 | INFO     | will abort loop
[2025-04-03 23:12:14] 2025-04-04 03:11:57,688 | INFO     | all payload control threads have been joined
[2025-04-03 23:12:14] 2025-04-04 03:11:58,094 | INFO     | all data control threads have been joined
[2025-04-03 23:12:14] 2025-04-04 03:11:58,380 | INFO     | all job control threads have been joined
[2025-04-03 23:12:14] 2025-04-04 03:11:58,525 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-03 23:12:14] 2025-04-04 03:11:58,536 | INFO     | [job] retrieve thread has finished
[2025-04-03 23:12:14] 2025-04-04 03:11:58,583 | INFO     | [data] copytool_in thread has finished
[2025-04-03 23:12:14] 2025-04-04 03:11:58,625 | INFO     | [payload] validate_post thread has finished
[2025-04-03 23:12:14] 2025-04-04 03:11:58,671 | INFO     | [job] job monitor thread has finished
[2025-04-03 23:12:14] 2025-04-04 03:11:58,694 | INFO     | [payload] control thread has finished
[2025-04-03 23:12:14] 2025-04-04 03:11:58,713 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-03 23:12:14] 2025-04-04 03:11:59,099 | INFO     | [data] control thread has finished
[2025-04-03 23:12:14] 2025-04-04 03:11:59,193 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-03 23:12:14] 2025-04-04 03:11:59,233 | INFO     | [payload] failed_post thread has finished
[2025-04-03 23:12:14] 2025-04-04 03:11:59,386 | INFO     | [job] control thread has finished
[2025-04-03 23:12:14] 2025-04-04 03:11:59,531 | INFO     | [job] queue monitor thread has finished
[2025-04-03 23:12:14] 2025-04-04 03:11:59,567 | INFO     | [payload] validate_pre thread has finished
[2025-04-03 23:12:14] 2025-04-04 03:11:59,571 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-03 23:12:14] 2025-04-04 03:11:59,656 | INFO     | [payload] execute_payloads thread has finished
[2025-04-03 23:12:14] 2025-04-04 03:11:59,751 | INFO     | [job] validate thread has finished
[2025-04-03 23:12:14] 2025-04-04 03:11:59,905 | INFO     | [job] create_data_payload thread has finished
[2025-04-03 23:12:14] 2025-04-04 03:12:00,720 | INFO     | [data] copytool_out thread has finished
[2025-04-03 23:12:14] 2025-04-04 03:12:03,202 | INFO     | [data] queue_monitor thread has finished
[2025-04-03 23:12:14] 2025-04-04 03:12:03,324 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139655612065600)>', '<ExcThread(monitor, started 139654879766272)>']
[2025-04-03 23:12:14] 2025-04-04 03:12:03,588 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-03 23:12:14] 2025-04-04 03:12:03,588 | INFO     | [monitor] control thread has ended
[2025-04-03 23:12:14] 2025-04-04 03:12:08,350 | INFO     | all workflow threads have been joined
[2025-04-03 23:12:14] 2025-04-04 03:12:08,350 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-03 23:12:14] 2025-04-04 03:12:08,377 | INFO     | traces error code: 0
[2025-04-03 23:12:14] 2025-04-04 03:12:08,378 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-03 23:12:14] 2025-04-04 03:12:09,637 [wrapper] ==== pilot stdout END ====
[2025-04-03 23:12:14] 2025-04-04 03:12:09,695 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-03 23:12:14] 2025-04-04 03:12:09,813 [wrapper] pilotpid: 38548
[2025-04-03 23:12:14] 2025-04-04 03:12:09,909 [wrapper] Pilot exit status: 0
[2025-04-03 23:12:14] 2025-04-04 03:12:10,346 [wrapper] pandaids: 6583913629
[2025-04-03 23:12:14] 2025-04-04 03:12:11,817 [wrapper] cleanup supervisor_pilot 41297 38549
[2025-04-03 23:12:14] 2025-04-04 03:12:11,852 [wrapper] Test setup, not cleaning
[2025-04-03 23:12:14] 2025-04-04 03:12:11,897 [wrapper] apfmon messages muted
[2025-04-03 23:12:14] 2025-04-04 03:12:11,923 [wrapper] ==== wrapper stdout END ====
[2025-04-03 23:12:14] 2025-04-04 03:12:12,058 [wrapper] ==== wrapper stderr END ====
[2025-04-03 23:12:14]  *** Error codes and diagnostics ***
[2025-04-03 23:12:14]     "exeErrorCode": 0,
[2025-04-03 23:12:14]     "exeErrorDiag": "",
[2025-04-03 23:12:14]     "pilotErrorCode": 0,
[2025-04-03 23:12:14]     "pilotErrorDiag": "",
[2025-04-03 23:12:14]  *** Listing of results directory ***
[2025-04-03 23:12:14] total 690960
[2025-04-03 23:12:14] -rw-r--r-- 1 boincer umatlas    494584 Apr  2 01:08 pilot3.tar.gz
[2025-04-03 23:12:14] -rw-r--r-- 1 boincer umatlas      5112 Apr  2 01:16 queuedata.json
[2025-04-03 23:12:14] -rwx------ 1 boincer umatlas     37140 Apr  2 01:18 runpilot2-wrapper.sh
[2025-04-03 23:12:14] -rw-r--r-- 1 boincer umatlas       100 Apr  3 04:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-03 23:12:14] -rwxr-xr-x 1 boincer umatlas      7986 Apr  3 04:15 run_atlas
[2025-04-03 23:12:14] -rw-r--r-- 1 boincer umatlas       105 Apr  3 04:15 job.xml
[2025-04-03 23:12:14] -rw-r--r-- 2 boincer umatlas 361524935 Apr  3 04:15 EVNT.43634896._000039.pool.root.1
[2025-04-03 23:12:14] -rw-r--r-- 2 boincer umatlas     17571 Apr  3 04:15 start_atlas.sh
[2025-04-03 23:12:14] drwxrwx--x 2 boincer umatlas      4096 Apr  3 04:15 shared
[2025-04-03 23:12:14] -rw-r--r-- 2 boincer umatlas    507252 Apr  3 04:15 input.tar.gz
[2025-04-03 23:12:14] -rw-r--r-- 1 boincer umatlas         0 Apr  3 04:15 boinc_lockfile
[2025-04-03 23:12:14] -rw-r--r-- 1 boincer umatlas      2595 Apr  3 04:15 pandaJob.out
[2025-04-03 23:12:14] -rw------- 1 boincer umatlas       467 Apr  3 04:15 setup.sh.local
[2025-04-03 23:12:14] -rw------- 1 boincer umatlas    990847 Apr  3 04:15 agis_schedconf.cvmfs.json
[2025-04-03 23:12:14] drwx------ 4 boincer umatlas      4096 Apr  3 04:15 pilot3
[2025-04-03 23:12:14] -rw------- 1 boincer umatlas 323535618 Apr  3 23:00 HITS.43634898._011531.pool.root.1
[2025-04-03 23:12:14] -rw-r--r-- 1 boincer umatlas      6134 Apr  3 23:01 init_data.xml
[2025-04-03 23:12:14] -rw-r--r-- 1 boincer umatlas       533 Apr  3 23:01 boinc_task_state.xml
[2025-04-03 23:12:14] -rw------- 1 boincer umatlas      1062 Apr  3 23:09 memory_monitor_summary.json
[2025-04-03 23:12:14] -rw------- 1 boincer umatlas   1603525 Apr  3 23:09 agis_ddmendpoints.agis.ALL.json
[2025-04-03 23:12:14] -rw------- 1 boincer umatlas   1039823 Apr  3 23:09 log.43634898._011531.job.log.tgz.1
[2025-04-03 23:12:14] -rw------- 1 boincer umatlas        95 Apr  3 23:11 pilot_heartbeat.json
[2025-04-03 23:12:14] -rw------- 1 boincer umatlas      7760 Apr  3 23:11 heartbeat.json
[2025-04-03 23:12:14] -rw-r--r-- 1 boincer umatlas      8192 Apr  3 23:12 boinc_mmap_file
[2025-04-03 23:12:14] -rw-r--r-- 1 boincer umatlas        29 Apr  3 23:12 wrapper_checkpoint.txt
[2025-04-03 23:12:14] -rw------- 1 boincer umatlas      4528 Apr  3 23:12 pilotlog.txt
[2025-04-03 23:12:14] -rw------- 1 boincer umatlas   8283599 Apr  3 23:12 log.43634898._011531.job.log.1
[2025-04-03 23:12:14] -rw------- 1 boincer umatlas       357 Apr  3 23:12 output.list
[2025-04-03 23:12:14] -rw-r--r-- 1 boincer umatlas       620 Apr  3 23:12 runtime_log
[2025-04-03 23:12:14] -rw------- 1 boincer umatlas   9338880 Apr  3 23:12 result.tar.gz
[2025-04-03 23:12:14] -rw-r--r-- 1 boincer umatlas     11420 Apr  3 23:12 runtime_log.err
[2025-04-03 23:12:14] -rw------- 1 boincer umatlas       666 Apr  3 23:12 MHxNDmLf5J7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmU3ELDmZIYfEn.diag
[2025-04-03 23:12:14] -rw-r--r-- 1 boincer umatlas     21864 Apr  3 23:12 stderr.txt
[2025-04-03 23:12:14] HITS file was successfully produced:
[2025-04-03 23:12:14] -rw------- 1 boincer umatlas 323535618 Apr  3 23:00 shared/HITS.pool.root.1
[2025-04-03 23:12:14]  *** Contents of shared directory: ***
[2025-04-03 23:12:14] total 678652
[2025-04-03 23:12:14] -rw-r--r-- 2 boincer umatlas 361524935 Apr  3 04:15 ATLAS.root_0
[2025-04-03 23:12:14] -rw-r--r-- 2 boincer umatlas     17571 Apr  3 04:15 start_atlas.sh
[2025-04-03 23:12:14] -rw-r--r-- 2 boincer umatlas    507252 Apr  3 04:15 input.tar.gz
[2025-04-03 23:12:14] -rw------- 1 boincer umatlas 323535618 Apr  3 23:00 HITS.pool.root.1
[2025-04-03 23:12:14] -rw------- 1 boincer umatlas   9338880 Apr  3 23:12 result.tar.gz
23:12:15 (33244): run_atlas exited; CPU time 117009.027576
23:12:15 (33244): called boinc_finish(0)

</stderr_txt>
]]>

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