Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:03:27 (23875): wrapper (7.7.26015): starting
11:03:27 (23875): wrapper: running run_atlas (--nthreads 12)
[2025-04-03 11:03:27] Arguments: --nthreads 12
[2025-04-03 11:03:27] Threads: 12
[2025-04-03 11:03:27] Checking for CVMFS
[2025-04-03 11:03:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 11:03:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 11:03:28] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 11:03:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 11:03:28] 2.11.2.0 15118 4101 102440 144438 0 185 24110431 25165824 0 130560 0 30149748 99.999 1121122 11395 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-04-03 11:03:28] CVMFS is ok
[2025-04-03 11:03:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 11:03:28] Checking for apptainer binary...
[2025-04-03 11:03:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 11:03:28] Running /usr/bin/apptainer --version
[2025-04-03 11:03:28] apptainer version 1.3.2-1.el7
[2025-04-03 11:03:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 11:03:32] cg-vwn116.simple-grid.lan
[2025-04-03 11:03:32] apptainer works
[2025-04-03 11:03:33] Set ATHENA_PROC_NUMBER=12
[2025-04-03 11:03:33] Set ATHENA_CORE_NUMBER=12
[2025-04-03 11:03:33] Starting ATLAS job with PandaID=6584050248
[2025-04-03 11:03:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-03 11:12:28]  *** The last 200 lines of the pilot log: ***
[2025-04-03 11:12:28] 2025-04-03 09:12:14,498 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-03 11:12:28] 2025-04-03 09:12:16,207 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-03 11:12:28] 2025-04-03 09:12:16,209 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6584050248/memory_monitor_output.txt
[2025-04-03 11:12:28] 2025-04-03 09:12:16,209 | INFO     | memory summary dictionary not yet available
[2025-04-03 11:12:28] 2025-04-03 09:12:16,210 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-03 11:12:28] 2025-04-03 09:12:16,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-03 11:12:28] 2025-04-03 09:12:16,213 | INFO     | ..............................
[2025-04-03 11:12:28] 2025-04-03 09:12:16,213 | INFO     | . Timing measurements:
[2025-04-03 11:12:28] 2025-04-03 09:12:16,213 | INFO     | . get job = 0 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,214 | INFO     | . initial setup = 2 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,214 | INFO     | . payload setup = 24 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,214 | INFO     | . stage-in = 0 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,215 | INFO     | . payload execution = 225 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,215 | INFO     | . stage-out = 0 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,215 | INFO     | . log creation = 0 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,216 | INFO     | ..............................
[2025-04-03 11:12:28] 2025-04-03 09:12:16,216 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-03 11:12:28] 2025-04-03 09:12:16,217 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6584050248/pilotlog.txt
[2025-04-03 11:12:28] 2025-04-03 09:12:16,275 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-04-03 11:12:28] - Log from pilotlog.txt -
[2025-04-03 11:12:28] 2025-04-03 09:12:11,993 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-03 11:12:28] 2025-04-03 09:12:14,498 | INFO     | monitor loop #141: job 0:6584050248 is in state 'failed'
[2025-04-03 11:12:28] 2025-04-03 09:12:14,498 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-03 11:12:28] 2025-04-03 09:12:16,207 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-03 11:12:28] 2025-04-03 09:12:16,209 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6584050248/memory_monitor_output.txt
[2025-04-03 11:12:28] 2025-04-03 09:12:16,209 | INFO     | memory summary dictionary not yet available
[2025-04-03 11:12:28] 2025-04-03 09:12:16,210 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-03 11:12:28] 2025-04-03 09:12:16,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-03 11:12:28] 2025-04-03 09:12:16,213 | INFO     | ..............................
[2025-04-03 11:12:28] 2025-04-03 09:12:16,213 | INFO     | . Timing measurements:
[2025-04-03 11:12:28] 2025-04-03 09:12:16,213 | INFO     | . get job = 0 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,214 | INFO     | . initial setup = 2 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,214 | INFO     | . payload setup = 24 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,214 | INFO     | . stage-in = 0 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,215 | INFO     | . payload execution = 225 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,215 | INFO     | . stage-out = 0 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,215 | INFO     | . log creation = 0 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,216 | INFO     | ..............................
[2025-04-03 11:12:28] 2025-04-03 09:12:16,216 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-03 11:12:28] 2025-04-03 09:12:16,217 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6584050248/pilotlog.txt
[2025-04-03 11:12:28] 2025-04-03 09:12:16,276 | WARNING  | 
[2025-04-03 11:12:28] [begin log extracts]
[2025-04-03 11:12:28] - Log from pilotlog.txt -
[2025-04-03 11:12:28] 2025-04-03 09:12:11,993 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-03 11:12:28] 2025-04-03 09:12:14,498 | INFO     | monitor loop #141: job 0:6584050248 is in state 'failed'
[2025-04-03 11:12:28] 2025-04-03 09:12:14,498 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-03 11:12:28] 2025-04-03 09:12:16,207 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-03 11:12:28] 2025-04-03 09:12:16,209 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6584050248/memory_monitor_output.txt
[2025-04-03 11:12:28] 2025-04-03 09:12:16,209 | INFO     | memory summary dictionary not yet available
[2025-04-03 11:12:28] 2025-04-03 09:12:16,210 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-03 11:12:28] 2025-04-03 09:12:16,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-03 11:12:28] 2025-04-03 09:12:16,213 | INFO     | ..............................
[2025-04-03 11:12:28] 2025-04-03 09:12:16,213 | INFO     | . Timing measurements:
[2025-04-03 11:12:28] 2025-04-03 09:12:16,213 | INFO     | . get job = 0 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,214 | INFO     | . initial setup = 2 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,214 | INFO     | . payload setup = 24 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,214 | INFO     | . stage-in = 0 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,215 | INFO     | . payload execution = 225 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,215 | INFO     | . stage-out = 0 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,215 | INFO     | . log creation = 0 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,216 | INFO     | ..............................
[2025-04-03 11:12:28] 2025-04-03 09:12:16,216 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-03 11:12:28] 2025-04-03 09:12:16,217 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6584050248/pilotlog.txt
[2025-04-03 11:12:28] [end log extracts]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,277 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-04-03 11:12:28] 2025-04-03 09:12:16,279 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-04-03 11:12:28] 2025-04-03 09:12:16,406 | INFO     | 491s have passed since pilot start
[2025-04-03 11:12:28] 2025-04-03 09:12:16,608 | INFO     | 
[2025-04-03 11:12:28] 2025-04-03 09:12:16,608 | INFO     | job summary report
[2025-04-03 11:12:28] 2025-04-03 09:12:16,609 | INFO     | --------------------------------------------------
[2025-04-03 11:12:28] 2025-04-03 09:12:16,609 | INFO     | PanDA job id: 6584050248
[2025-04-03 11:12:28] 2025-04-03 09:12:16,609 | INFO     | task id: 43634898
[2025-04-03 11:12:28] 2025-04-03 09:12:16,610 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-04-03 09:08:50,882 CRITICAL Transform executor raised TransformValidationExceptio
[2025-04-03 11:12:28] 2025-04-03 09:12:16,610 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-03 11:12:28] 2025-04-03 09:12:16,611 | INFO     | pilot state: failed 
[2025-04-03 11:12:28] 2025-04-03 09:12:16,611 | INFO     | transexitcode: 65
[2025-04-03 11:12:28] 2025-04-03 09:12:16,611 | INFO     | exeerrorcode: 65
[2025-04-03 11:12:28] 2025-04-03 09:12:16,612 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-04-03 11:12:28] 2025-04-03 09:12:16,612 | INFO     | exitcode: 65
[2025-04-03 11:12:28] 2025-04-03 09:12:16,612 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-04-03 11:12:28] 2025-04-03 09:12:16,613 | INFO     | cpuconsumptiontime: 262 s
[2025-04-03 11:12:28] 2025-04-03 09:12:16,613 | INFO     | nevents: 0
[2025-04-03 11:12:28] 2025-04-03 09:12:16,613 | INFO     | neventsw: 0
[2025-04-03 11:12:28] 2025-04-03 09:12:16,613 | INFO     | pid: 1650
[2025-04-03 11:12:28] 2025-04-03 09:12:16,614 | INFO     | pgrp: 1650
[2025-04-03 11:12:28] 2025-04-03 09:12:16,614 | INFO     | corecount: 12
[2025-04-03 11:12:28] 2025-04-03 09:12:16,615 | INFO     | event service: False
[2025-04-03 11:12:28] 2025-04-03 09:12:16,615 | INFO     | sizes: {0: 2417089, 1: 2417288, 12: 2417288, 17: 2417522, 23: 2417550, 314: 2440943, 315: 2441075, 317: 2445369, 320: 2445425, 450: 2445595}
[2025-04-03 11:12:28] 2025-04-03 09:12:16,616 | INFO     | --------------------------------------------------
[2025-04-03 11:12:28] 2025-04-03 09:12:16,616 | INFO     | 
[2025-04-03 11:12:28] 2025-04-03 09:12:16,616 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-04-03 11:12:28] 2025-04-03 09:12:16,701 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,702 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,703 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,703 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,704 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,704 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,704 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,705 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,705 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,705 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,706 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,706 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,707 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,707 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,707 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,708 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-03 11:12:28] 2025-04-03 09:12:16,709 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,710 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-03 11:12:28] 2025-04-03 09:12:16,711 | INFO     | job 6584050248 has completed (purged errors)
[2025-04-03 11:12:28] 2025-04-03 09:12:16,711 | INFO     | overall cleanup function is called
[2025-04-03 11:12:28] 2025-04-03 09:12:17,721 | INFO     | --- collectZombieJob: --- 10, [1650]
[2025-04-03 11:12:28] 2025-04-03 09:12:17,722 | INFO     | zombie collector waiting for pid 1650
[2025-04-03 11:12:28] 2025-04-03 09:12:17,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-03 11:12:28] 2025-04-03 09:12:17,724 | INFO     | collected zombie processes
[2025-04-03 11:12:28] 2025-04-03 09:12:17,725 | INFO     | will attempt to kill all subprocesses of pid=1650
[2025-04-03 11:12:28] 2025-04-03 09:12:17,774 | INFO     | PID=27571 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-03 11:12:28] 2025-04-03 09:12:17,888 | INFO     | process IDs to be killed: [1650] (in reverse order)
[2025-04-03 11:12:28] 2025-04-03 09:12:18,039 | WARNING  | found no corresponding commands to process id(s)
[2025-04-03 11:12:28] 2025-04-03 09:12:18,040 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-03 11:12:28] 2025-04-03 09:12:18,047 | INFO     | did not find any defunct processes belonging to 1650
[2025-04-03 11:12:28] 2025-04-03 09:12:18,053 | INFO     | did not find any defunct processes belonging to 1650
[2025-04-03 11:12:28] 2025-04-03 09:12:18,054 | INFO     | ready for new job
[2025-04-03 11:12:28] 2025-04-03 09:12:18,055 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-03 11:12:28] 2025-04-03 09:12:18,059 | INFO     | ***************************************
[2025-04-03 11:12:28] 2025-04-03 09:12:18,059 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-03 11:12:28] 2025-04-03 09:12:18,060 | INFO     | ***************************************
[2025-04-03 11:12:28] 2025-04-03 09:12:18,060 | INFO     | 
[2025-04-03 11:12:28] 2025-04-03 09:12:18,062 | INFO     | pilot is running in a VM
[2025-04-03 11:12:28] 2025-04-03 09:12:18,062 | INFO     | architecture information:
[2025-04-03 11:12:28] 2025-04-03 09:12:18,064 | INFO     | executing command: cat /etc/os-release
[2025-04-03 11:12:28] 2025-04-03 09:12:18,127 | INFO     | cat /etc/os-release:
[2025-04-03 11:12:28] NAME="CentOS Linux"
[2025-04-03 11:12:28] VERSION="7 (Core)"
[2025-04-03 11:12:28] ID="centos"
[2025-04-03 11:12:28] ID_LIKE="rhel fedora"
[2025-04-03 11:12:28] VERSION_ID="7"
[2025-04-03 11:12:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-03 11:12:28] ANSI_COLOR="0;31"
[2025-04-03 11:12:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-03 11:12:28] HOME_URL="https://www.centos.org/"
[2025-04-03 11:12:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-03 11:12:28] 
[2025-04-03 11:12:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-03 11:12:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-03 11:12:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-03 11:12:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-03 11:12:28] 
[2025-04-03 11:12:28] 2025-04-03 09:12:18,128 | INFO     | ***************************************
[2025-04-03 11:12:28] 2025-04-03 09:12:18,632 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-04-03 11:12:28] 2025-04-03 09:12:18,694 | INFO     | sufficient remaining disk space (259627417600 B)
[2025-04-03 11:12:28] 2025-04-03 09:12:18,695 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-03 11:12:28] 2025-04-03 09:12:18,696 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-03 11:12:28] 2025-04-03 09:12:18,697 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-03 11:12:28] 2025-04-03 09:12:18,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-03 11:12:28] 2025-04-03 09:12:18,698 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-03 11:12:28] 2025-04-03 09:12:18,698 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-03 11:12:28] 2025-04-03 09:12:18,701 | INFO     | found 0 job(s) in 20 queues
[2025-04-03 11:12:28] 2025-04-03 09:12:18,701 | INFO     | aborting loop
[2025-04-03 11:12:28] 2025-04-03 09:12:18,703 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-03 11:12:28] 2025-04-03 09:12:18,704 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-03 11:12:28] 2025-04-03 09:12:19,190 | INFO     | all payload control threads have been joined
[2025-04-03 11:12:28] 2025-04-03 09:12:19,478 | INFO     | all data control threads have been joined
[2025-04-03 11:12:28] 2025-04-03 09:12:19,703 | INFO     | [job] retrieve thread has finished
[2025-04-03 11:12:28] 2025-04-03 09:12:19,708 | INFO     | [job] job monitor thread has finished
[2025-04-03 11:12:28] 2025-04-03 09:12:19,760 | INFO     | [payload] failed_post thread has finished
[2025-04-03 11:12:28] 2025-04-03 09:12:19,927 | INFO     | all job control threads have been joined
[2025-04-03 11:12:28] 2025-04-03 09:12:20,124 | INFO     | [job] create_data_payload thread has finished
[2025-04-03 11:12:28] 2025-04-03 09:12:20,196 | INFO     | [payload] control thread has finished
[2025-04-03 11:12:28] 2025-04-03 09:12:20,445 | INFO     | [payload] validate_pre thread has finished
[2025-04-03 11:12:28] 2025-04-03 09:12:20,484 | INFO     | [data] control thread has finished
[2025-04-03 11:12:28] 2025-04-03 09:12:20,507 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-03 11:12:28] 2025-04-03 09:12:20,614 | INFO     | [payload] validate_post thread has finished
[2025-04-03 11:12:28] 2025-04-03 09:12:20,705 | INFO     | [data] copytool_out thread has finished
[2025-04-03 11:12:28] 2025-04-03 09:12:20,751 | INFO     | [job] validate thread has finished
[2025-04-03 11:12:28] 2025-04-03 09:12:20,934 | INFO     | [job] control thread has finished
[2025-04-03 11:12:28] 2025-04-03 09:12:20,977 | INFO     | [data] copytool_in thread has finished
[2025-04-03 11:12:28] 2025-04-03 09:12:20,995 | INFO     | [payload] execute_payloads thread has finished
[2025-04-03 11:12:28] 2025-04-03 09:12:21,461 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-03 11:12:28] 2025-04-03 09:12:22,468 | INFO     | [job] queue monitor thread has finished
[2025-04-03 11:12:28] 2025-04-03 09:12:22,712 | INFO     | [data] queue_monitor thread has finished
[2025-04-03 11:12:28] 2025-04-03 09:12:22,730 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140194300630848)>', '<ExcThread(monitor, started 140193336112896)>']
[2025-04-03 11:12:28] 2025-04-03 09:12:23,731 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-03 11:12:28] 2025-04-03 09:12:23,732 | INFO     | [monitor] control thread has ended
[2025-04-03 11:12:28] 2025-04-03 09:12:27,756 | INFO     | all workflow threads have been joined
[2025-04-03 11:12:28] 2025-04-03 09:12:27,757 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-03 11:12:28] 2025-04-03 09:12:27,758 | INFO     | traces error code: 0
[2025-04-03 11:12:28] 2025-04-03 09:12:27,758 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-03 11:12:28] 2025-04-03 09:12:28,040 [wrapper] ==== pilot stdout END ====
[2025-04-03 11:12:28] 2025-04-03 09:12:28,054 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-03 11:12:28] 2025-04-03 09:12:28,068 [wrapper] pilotpid: 27571
[2025-04-03 11:12:28] 2025-04-03 09:12:28,081 [wrapper] Pilot exit status: 0
[2025-04-03 11:12:28] 2025-04-03 09:12:28,131 [wrapper] pandaids: 6584050248
[2025-04-03 11:12:28] 2025-04-03 09:12:28,240 [wrapper] cleanup supervisor_pilot 27577 27572
[2025-04-03 11:12:28] 2025-04-03 09:12:28,253 [wrapper] Test setup, not cleaning
[2025-04-03 11:12:28] 2025-04-03 09:12:28,266 [wrapper] apfmon messages muted
[2025-04-03 11:12:28] 2025-04-03 09:12:28,279 [wrapper] ==== wrapper stdout END ====
[2025-04-03 11:12:28] 2025-04-03 09:12:28,292 [wrapper] ==== wrapper stderr END ====
[2025-04-03 11:12:28]  *** Error codes and diagnostics ***
[2025-04-03 11:12:28]     "exeErrorCode": 65,
[2025-04-03 11:12:28]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-04-03 11:12:28]     "pilotErrorCode": 1305,
[2025-04-03 11:12:28]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-04-03 11:12:28]  *** Listing of results directory ***
[2025-04-03 11:12:28] total 357188
[2025-04-03 11:12:28] -rw-r--r--. 1 boinc boinc    494584 Apr  2 09:15 pilot3.tar.gz
[2025-04-03 11:12:28] -rw-r--r--. 1 boinc boinc      5112 Apr  2 09:29 queuedata.json
[2025-04-03 11:12:28] -rwx------. 1 boinc boinc     37140 Apr  2 09:30 runpilot2-wrapper.sh
[2025-04-03 11:12:28] -rw-r--r--. 1 boinc boinc       100 Apr  3 11:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-03 11:12:28] -rwxr-xr-x. 1 boinc boinc      7986 Apr  3 11:03 run_atlas
[2025-04-03 11:12:28] -rw-r--r--. 1 boinc boinc       105 Apr  3 11:03 job.xml
[2025-04-03 11:12:28] -rw-r--r--. 2 boinc boinc 361553725 Apr  3 11:03 EVNT.43634896._000392.pool.root.1
[2025-04-03 11:12:28] -rw-r--r--. 1 boinc boinc      6072 Apr  3 11:03 init_data.xml
[2025-04-03 11:12:28] -rw-r--r--. 2 boinc boinc     17571 Apr  3 11:03 start_atlas.sh
[2025-04-03 11:12:28] drwxrwx--x. 2 boinc boinc        68 Apr  3 11:03 shared
[2025-04-03 11:12:28] -rw-r--r--. 2 boinc boinc    507260 Apr  3 11:03 input.tar.gz
[2025-04-03 11:12:28] -rw-r--r--. 1 boinc boinc         0 Apr  3 11:03 boinc_lockfile
[2025-04-03 11:12:28] -rw-r--r--. 1 boinc boinc      2599 Apr  3 11:03 pandaJob.out
[2025-04-03 11:12:28] -rw-------. 1 boinc boinc       424 Apr  3 11:03 setup.sh.local
[2025-04-03 11:12:28] -rw-------. 1 boinc boinc    990847 Apr  3 11:04 agis_schedconf.cvmfs.json
[2025-04-03 11:12:28] -rw-------. 1 boinc boinc   1603485 Apr  3 11:04 agis_ddmendpoints.agis.ALL.json
[2025-04-03 11:12:28] drwx------. 4 boinc boinc      4096 Apr  3 11:04 pilot3
[2025-04-03 11:12:28] -rw-r--r--. 1 boinc boinc       526 Apr  3 11:08 boinc_task_state.xml
[2025-04-03 11:12:28] -rw-------. 1 boinc boinc     47670 Apr  3 11:10 log.43634898._012499.job.log.tgz.1
[2025-04-03 11:12:28] -rw-------. 1 boinc boinc        95 Apr  3 11:12 pilot_heartbeat.json
[2025-04-03 11:12:28] -rw-r--r--. 1 boinc boinc      8192 Apr  3 11:12 boinc_mmap_file
[2025-04-03 11:12:28] -rw-r--r--. 1 boinc boinc        24 Apr  3 11:12 wrapper_checkpoint.txt
[2025-04-03 11:12:28] -rw-------. 1 boinc boinc      8019 Apr  3 11:12 heartbeat.json
[2025-04-03 11:12:28] -rw-------. 1 boinc boinc      4405 Apr  3 11:12 pilotlog.txt
[2025-04-03 11:12:28] -rw-------. 1 boinc boinc    144685 Apr  3 11:12 log.43634898._012499.job.log.1
[2025-04-03 11:12:28] -rw-------. 1 boinc boinc       188 Apr  3 11:12 output.list
[2025-04-03 11:12:28] -rw-r--r--. 1 boinc boinc       620 Apr  3 11:12 runtime_log
[2025-04-03 11:12:28] -rw-------. 1 boinc boinc    215040 Apr  3 11:12 result.tar.gz
[2025-04-03 11:12:28] -rw-r--r--. 1 boinc boinc     10862 Apr  3 11:12 runtime_log.err
[2025-04-03 11:12:28] -rw-------. 1 boinc boinc       639 Apr  3 11:12 MsLODmUj7J7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmNprKDmjRhtRm.diag
[2025-04-03 11:12:28] -rw-r--r--. 1 boinc boinc     21621 Apr  3 11:12 stderr.txt
[2025-04-03 11:12:28] No HITS result produced
[2025-04-03 11:12:28]  *** Contents of shared directory: ***
[2025-04-03 11:12:28] total 353808
[2025-04-03 11:12:28] -rw-r--r--. 2 boinc boinc 361553725 Apr  3 11:03 ATLAS.root_0
[2025-04-03 11:12:28] -rw-r--r--. 2 boinc boinc     17571 Apr  3 11:03 start_atlas.sh
[2025-04-03 11:12:28] -rw-r--r--. 2 boinc boinc    507260 Apr  3 11:03 input.tar.gz
[2025-04-03 11:12:28] -rw-------. 1 boinc boinc    215040 Apr  3 11:12 result.tar.gz
11:12:29 (23875): run_atlas exited; CPU time 196.665948
11:12:29 (23875): called boinc_finish(0)

</stderr_txt>
]]>

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