Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-03 12:25:22 (6064): Detected: vboxwrapper 26206
2025-04-03 12:25:23 (6064): Detected: BOINC client v8.0.2
2025-04-03 12:25:23 (6064): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2025-04-03 12:25:23 (6064): Successfully copied 'init_data.xml' to the shared directory.
2025-04-03 12:25:24 (6064): Create VM. (boinc_cbeff7969759ddcf, slot#4)
2025-04-03 12:25:24 (6064): Setting Memory Size for VM. (4400MB)
2025-04-03 12:25:25 (6064): Setting CPU Count for VM. (4)
2025-04-03 12:25:25 (6064): Setting Chipset Options for VM.
2025-04-03 12:25:25 (6064): Setting Graphics Controller Options for VM.
2025-04-03 12:25:26 (6064): Setting Boot Options for VM.
2025-04-03 12:25:26 (6064): Setting Network Configuration for NAT.
2025-04-03 12:25:26 (6064): Enabling VM Network Access.
2025-04-03 12:25:26 (6064): Disabling USB Support for VM.
2025-04-03 12:25:27 (6064): Disabling COM Port Support for VM.
2025-04-03 12:25:27 (6064): Disabling LPT Port Support for VM.
2025-04-03 12:25:27 (6064): Disabling Audio Support for VM.
2025-04-03 12:25:27 (6064): Disabling Clipboard Support for VM.
2025-04-03 12:25:28 (6064): Disabling Drag and Drop Support for VM.
2025-04-03 12:25:28 (6064): Adding storage controller(s) to VM.
2025-04-03 12:25:28 (6064): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-03 12:25:29 (6064): Adding VirtualBox Guest Additions to VM.
2025-04-03 12:25:29 (6064): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-03 12:25:29 (6064): forwarding host port 61490 to guest port 80
2025-04-03 12:25:30 (6064): Enabling remote desktop for VM.
2025-04-03 12:25:30 (6064): Required extension pack not installed, remote desktop not enabled.
2025-04-03 12:25:30 (6064): Enabling shared directory for VM.
2025-04-03 12:25:30 (6064): Starting VM using VBoxManage interface. (boinc_cbeff7969759ddcf, slot#4)
2025-04-03 12:25:39 (6064): Successfully started VM. (PID = '8392')
2025-04-03 12:25:39 (6064): Reporting VM Process ID to BOINC.
2025-04-03 12:25:39 (6064): Guest Log: BIOS: VirtualBox 7.0.18
2025-04-03 12:25:39 (6064): Guest Log: CPUID EDX: 0x178bfbff
2025-04-03 12:25:39 (6064): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-03 12:25:39 (6064): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-03 12:25:39 (6064): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-03 12:25:39 (6064): Detected: Web Application Enabled (http://localhost:61490)
2025-04-03 12:25:39 (6064): Preference change detected
2025-04-03 12:25:39 (6064): Setting CPU throttle for VM. (100%)
2025-04-03 12:25:39 (6064): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-03 12:25:41 (6064): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-03 12:25:41 (6064): Guest Log: BIOS: Booting from Hard Disk...
2025-04-03 12:25:45 (6064): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-03 12:25:45 (6064): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-03 12:25:45 (6064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-03 12:25:53 (6064): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-03 12:25:53 (6064): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-03 12:26:07 (6064): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-03 12:26:07 (6064): Guest Log: 00:00:00.000278 main     Log opened 2025-04-03T12:26:05.719852000Z
2025-04-03 12:26:07 (6064): Guest Log: 00:00:00.000452 main     OS Product: Linux
2025-04-03 12:26:07 (6064): Guest Log: 00:00:00.000517 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-03 12:26:07 (6064): Guest Log: 00:00:00.000637 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-03 12:26:07 (6064): Guest Log: 00:00:00.000699 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-03 12:26:07 (6064): Guest Log: 00:00:00.000701 main     Process ID: 1318
2025-04-03 12:26:07 (6064): Guest Log: 00:00:00.000702 main     Package type: LINUX_64BITS_GENERIC
2025-04-03 12:26:07 (6064): Guest Log: 00:00:00.002922 main     5.2.32 r132073 started. Verbose level = 0
2025-04-03 12:26:07 (6064): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-03 12:26:07 (6064): Guest Log: [INFO] Mounting shared directory
2025-04-03 12:26:08 (6064): Guest Log: [INFO] Checking for init_data.xml
2025-04-03 12:26:12 (6064): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-03 12:26:12 (6064): Guest Log: [INFO] Detected branch: prod
2025-04-03 12:26:12 (6064): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-03 12:26:12 (6064): Guest Log: Copying input files
2025-04-03 12:26:14 (6064): Guest Log: Copied input files into RunAtlas.
2025-04-03 12:26:14 (6064): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-03 12:26:14 (6064): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-03 12:26:14 (6064): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-03 12:26:14 (6064): Guest Log: Further information can be found at the LHC@home message board.
2025-04-03 12:26:17 (6064): Guest Log: 00:00:10.007474 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 141 283 000ns (GuestNow=1 743 675 977 584 304 000 ns GuestLast=1 743 683 165 725 587 000 ns fSetTimeLastLoop=true )
2025-04-03 12:26:29 (6064): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-03 12:26:29 (6064): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-03 12:26:29 (6064): Guest Log: 2.6.3.0 1593 0 30344 144444 3 1 3119944 4096000 0 65024 0 0 n/a 1170 346 http://s1sampa-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-03 12:26:30 (6064): Guest Log: copied the webapp to /var/www
2025-04-03 12:26:30 (6064): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-03 12:26:30 (6064): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-03 12:26:31 (6064): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-03 12:26:31 (6064): Guest Log:  *** Starting ATLAS job. (PandaID=6584907812 taskID=44004367) ***
2025-04-03 14:12:45 (6064): Status Report: Elapsed Time: '6000.697235'
2025-04-03 14:12:45 (6064): Status Report: CPU Time: '20262.406250'
2025-04-03 16:02:08 (6064): Status Report: Elapsed Time: '12001.580368'
2025-04-03 16:02:08 (6064): Status Report: CPU Time: '45957.203125'
2025-04-03 17:52:18 (6064): Status Report: Elapsed Time: '18002.072319'
2025-04-03 17:52:18 (6064): Status Report: CPU Time: '71673.187500'
2025-04-03 19:42:44 (6064): Status Report: Elapsed Time: '24003.020288'
2025-04-03 19:42:44 (6064): Status Report: CPU Time: '97477.421875'
2025-04-03 21:31:48 (6064): Status Report: Elapsed Time: '30003.734644'
2025-04-03 21:31:48 (6064): Status Report: CPU Time: '123008.000000'
2025-04-03 23:21:14 (6064): Status Report: Elapsed Time: '36003.851151'
2025-04-03 23:21:14 (6064): Status Report: CPU Time: '147873.078125'
2025-04-03 23:22:27 (6064): Guest Log:  *** Job finished ***
2025-04-03 23:22:27 (6064): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:17,750 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:18,017 | INFO     | [data] copytool_out thread has finished
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:21,756 | INFO     | [data] queue_monitor thread has finished
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:22,072 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140068380641088)>', '<ExcThread(monitor, started 140067767035648)>']
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:22,723 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:22,723 | INFO     | [monitor] control thread has ended
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:27,100 | INFO     | all workflow threads have been joined
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:27,100 | INFO     | end of generic workflow (traces error code: 0)
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:27,103 | INFO     | traces error code: 0
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:27,104 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:27,300 [wrapper] ==== pilot stdout END ====
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:27,309 [wrapper] ==== wrapper stdout RESUME ====
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:27,320 [wrapper] pilotpid: 5918
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:27,330 [wrapper] Pilot exit status: 0
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:27,419 [wrapper] pandaids: 6584907812
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:27,482 [wrapper] cleanup supervisor_pilot 20520 5919
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:27,493 [wrapper] Test setup, not cleaning
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:27,503 [wrapper] apfmon messages muted
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:27,515 [wrapper] ==== wrapper stdout END ====
2025-04-03 23:22:27 (6064): Guest Log: 2025-04-03 21:22:27,524 [wrapper] ==== wrapper stderr END ====
2025-04-03 23:22:27 (6064): Guest Log:  *** Error codes and diagnostics ***
2025-04-03 23:22:27 (6064): Guest Log:     "exeErrorCode": 0,
2025-04-03 23:22:27 (6064): Guest Log:     "exeErrorDiag": "",
2025-04-03 23:22:27 (6064): Guest Log:     "pilotErrorCode": 0,
2025-04-03 23:22:27 (6064): Guest Log:     "pilotErrorDiag": "",
2025-04-03 23:22:27 (6064): Guest Log:  *** Listing of results directory ***
2025-04-03 23:22:27 (6064): Guest Log: total 206620
2025-04-03 23:22:28 (6064): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Apr  3 02:25 queuedata.json
2025-04-03 23:22:28 (6064): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Apr  3 02:26 pilot3.tar.gz
2025-04-03 23:22:28 (6064): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  3 02:28 runpilot2-wrapper.sh
2025-04-03 23:22:28 (6064): Guest Log: -rwxr-xr-x. 1 atlas atlas      8291 Apr  3 10:26 init_data.xml
2025-04-03 23:22:28 (6064): Guest Log: -rwxr-xr-x. 1 atlas atlas    507237 Apr  3 10:26 input.tar.gz
2025-04-03 23:22:28 (6064): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  3 10:26 start_atlas.sh
2025-04-03 23:22:28 (6064): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  3 10:26 EVNT.44004365._000255.pool.root.1 -> /data/./ATLAS.root_0
2025-04-03 23:22:28 (6064): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Apr  3 10:26 pandaJob.out
2025-04-03 23:22:28 (6064): Guest Log: -rw-------. 1 atlas atlas       424 Apr  3 10:26 setup.sh.local
2025-04-03 23:22:28 (6064): Guest Log: -rw-------. 1 atlas atlas    990626 Apr  3 10:27 agis_schedconf.cvmfs.json
2025-04-03 23:22:28 (6064): Guest Log: drwx------. 4 atlas atlas      4096 Apr  3 10:27 pilot3
2025-04-03 23:22:28 (6064): Guest Log: -rw-------. 1 atlas atlas 198135541 Apr  3 21:20 HITS.44004367._006353.pool.root.1
2025-04-03 23:22:28 (6064): Guest Log: -rw-------. 1 atlas atlas        95 Apr  3 21:21 pilot_heartbeat.json
2025-04-03 23:22:28 (6064): Guest Log: -rw-------. 1 atlas atlas      1030 Apr  3 21:21 memory_monitor_summary.json
2025-04-03 23:22:28 (6064): Guest Log: -rw-------. 1 atlas atlas   1603525 Apr  3 21:21 agis_ddmendpoints.agis.ALL.json
2025-04-03 23:22:28 (6064): Guest Log: -rw-------. 1 atlas atlas    580231 Apr  3 21:21 log.44004367._006353.job.log.tgz.1
2025-04-03 23:22:28 (6064): Guest Log: -rw-------. 1 atlas atlas      7727 Apr  3 21:22 heartbeat.json
2025-04-03 23:22:28 (6064): Guest Log: -rw-------. 1 atlas atlas      4402 Apr  3 21:22 pilotlog.txt
2025-04-03 23:22:28 (6064): Guest Log: -rw-------. 1 atlas atlas   4258048 Apr  3 21:22 log.44004367._006353.job.log.1
2025-04-03 23:22:28 (6064): Guest Log: -rw-------. 1 atlas atlas       357 Apr  3 21:22 output.list
2025-04-03 23:22:28 (6064): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  3 21:22 runtime_log
2025-04-03 23:22:28 (6064): Guest Log: -rw-------. 1 atlas atlas   4853760 Apr  3 21:22 result.tar.gz
2025-04-03 23:22:28 (6064): Guest Log: -rw-r--r--. 1 atlas atlas     11033 Apr  3 21:22 runtime_log.err
2025-04-03 23:22:28 (6064): Guest Log: -rw-------. 1 atlas atlas       689 Apr  3 21:22 cYDLDmKVPK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmJasKDml7OjSo.diag
2025-04-03 23:22:28 (6064): Guest Log: Looking for outputfile HITS.44004367._006353.pool.root.1
2025-04-03 23:22:28 (6064): Guest Log: HITS file was successfully produced
2025-04-03 23:22:28 (6064): Guest Log: -rw-------. 1 atlas atlas 198135541 Apr  3 21:20 /home/atlas/RunAtlas/HITS.44004367._006353.pool.root.1
2025-04-03 23:22:30 (6064): Guest Log: Successfully finished the ATLAS job!
2025-04-03 23:22:30 (6064): Guest Log: Copying the results back to the shared directory!
2025-04-03 23:22:30 (6064): Guest Log:  *** Contents of shared directory: ***
2025-04-03 23:22:30 (6064): Guest Log: total 414152
2025-04-03 23:22:30 (6064): Guest Log: -rwxrwxrwx. 1 root root 220560503 Apr  3 10:25 ATLAS.root_0
2025-04-03 23:22:30 (6064): Guest Log: -rwxrwxrwx. 1 root root 198135541 Apr  3 21:22 HITS.pool.root.1
2025-04-03 23:22:30 (6064): Guest Log: -rwxrwxrwx. 1 root root      8291 Apr  3 10:25 init_data.xml
2025-04-03 23:22:30 (6064): Guest Log: -rwxrwxrwx. 1 root root    507237 Apr  3 06:54 input.tar.gz
2025-04-03 23:22:30 (6064): Guest Log: -rwxrwxrwx. 1 root root   4853760 Apr  3 21:22 result.tar.gz
2025-04-03 23:22:30 (6064): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  3 06:54 start_atlas.sh
2025-04-03 23:22:30 (6064): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-03 23:22:30 (6064): VM Completion File Detected.
2025-04-03 23:22:30 (6064): Powering off VM.
2025-04-03 23:22:32 (6064): Successfully stopped VM.
2025-04-03 23:22:32 (6064): Deregistering VM. (boinc_cbeff7969759ddcf, slot#4)
2025-04-03 23:22:32 (6064): Removing network bandwidth throttle group from VM.
2025-04-03 23:22:32 (6064): Removing VM from VirtualBox.
23:22:38 (6064): called boinc_finish(0)

</stderr_txt>
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