Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:56:35 (4057989): wrapper (7.7.26015): starting
06:56:35 (4057989): wrapper: running run_atlas (--nthreads 4)
[2025-04-06 06:56:35] Arguments: --nthreads 4
[2025-04-06 06:56:35] Threads: 4
[2025-04-06 06:56:35] Checking for CVMFS
[2025-04-06 06:56:35] No cvmfs_config command found, will try listing directly
[2025-04-06 06:56:35] CVMFS is ok
[2025-04-06 06:56:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-06 06:56:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-06 06:56:35] Further information can be found at the LHC@home message board.
[2025-04-06 06:56:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-06 06:56:35] Checking for apptainer binary...
[2025-04-06 06:56:35] which: no apptainer in ((null))
[2025-04-06 06:56:35] apptainer is not installed, using version from CVMFS
[2025-04-06 06:56:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-06 06:56:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-04-06 06:56:35] apptainer works
[2025-04-06 06:56:35] Set ATHENA_PROC_NUMBER=4
[2025-04-06 06:56:35] Set ATHENA_CORE_NUMBER=4
[2025-04-06 06:56:35] Starting ATLAS job with PandaID=6584051466
[2025-04-06 06:56:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-06 10:01:01]  *** The last 200 lines of the pilot log: ***
[2025-04-06 10:01:01] 2025-04-06 07:59:30,642 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-06 10:01:01] 2025-04-06 07:59:30,642 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-06 10:01:01] 2025-04-06 07:59:30,646 | INFO     | fitting pss+swap vs Time
[2025-04-06 10:01:01] 2025-04-06 07:59:30,646 | INFO     | model: linear, x: [1743915430.0, 1743915491.0, 1743915552.0, 1743915613.0, 1743915674.0, 1743915735.0, 1743915796.0, 1743915857.0, 1743915918.0, 1743915979.0, 1743
[2025-04-06 10:01:01] 2025-04-06 07:59:30,646 | INFO     | sum of square deviations: 1808350185.0
[2025-04-06 10:01:01] 2025-04-06 07:59:30,647 | INFO     | sum of deviations: 36783889776.50001
[2025-04-06 10:01:01] 2025-04-06 07:59:30,647 | INFO     | mean x: 1743920889.5
[2025-04-06 10:01:01] 2025-04-06 07:59:30,647 | INFO     | mean y: 2339500.0944444444
[2025-04-06 10:01:01] 2025-04-06 07:59:30,647 | INFO     | -- intersect: -35470985473.35579
[2025-04-06 10:01:01] 2025-04-06 07:59:30,647 | INFO     | intersect: -35470985473.35579
[2025-04-06 10:01:01] 2025-04-06 07:59:30,648 | INFO     | chi2: 3.5295362041829925
[2025-04-06 10:01:01] 2025-04-06 07:59:30,648 | INFO     | model: linear, x: [1743915430.0, 1743915491.0, 1743915552.0, 1743915613.0, 1743915674.0, 1743915735.0, 1743915796.0, 1743915857.0, 1743915918.0, 1743915979.0, 1743
[2025-04-06 10:01:01] 2025-04-06 07:59:30,648 | INFO     | sum of square deviations: 1661798600.0
[2025-04-06 10:01:01] 2025-04-06 07:59:30,649 | INFO     | sum of deviations: 46734259277.99999
[2025-04-06 10:01:01] 2025-04-06 07:59:30,649 | INFO     | mean x: 1743920737.0
[2025-04-06 10:01:01] 2025-04-06 07:59:30,649 | INFO     | mean y: 2349588.4
[2025-04-06 10:01:01] 2025-04-06 07:59:30,649 | INFO     | -- intersect: -49041405703.750824
[2025-04-06 10:01:01] 2025-04-06 07:59:30,649 | INFO     | intersect: -49041405703.750824
[2025-04-06 10:01:01] 2025-04-06 07:59:30,650 | INFO     | chi2: 2.785256538928111
[2025-04-06 10:01:01] 2025-04-06 07:59:30,650 | INFO     | current chi2=2.785256538928111 (change=21.08718036020728 %)
[2025-04-06 10:01:01] 2025-04-06 07:59:30,650 | INFO     | right removable region: 174
[2025-04-06 10:01:01] 2025-04-06 07:59:30,650 | INFO     | model: linear, x: [1743915735.0, 1743915796.0, 1743915857.0, 1743915918.0, 1743915979.0, 1743916040.0, 1743916101.0, 1743916162.0, 1743916223.0, 1743916284.0, 1743
[2025-04-06 10:01:01] 2025-04-06 07:59:30,650 | INFO     | sum of square deviations: 1661798600.0
[2025-04-06 10:01:01] 2025-04-06 07:59:30,651 | INFO     | sum of deviations: 1506661081.9999886
[2025-04-06 10:01:01] 2025-04-06 07:59:30,651 | INFO     | mean x: 1743921042.0
[2025-04-06 10:01:01] 2025-04-06 07:59:30,651 | INFO     | mean y: 2376023.4057142856
[2025-04-06 10:01:01] 2025-04-06 07:59:30,651 | INFO     | -- intersect: -1578740944.7168171
[2025-04-06 10:01:01] 2025-04-06 07:59:30,651 | INFO     | intersect: -1578740944.7168171
[2025-04-06 10:01:01] 2025-04-06 07:59:30,652 | INFO     | chi2: 1.654263410383344
[2025-04-06 10:01:01] 2025-04-06 07:59:30,652 | INFO     | current chi2=1.654263410383344 (change=53.13085587781161 %)
[2025-04-06 10:01:01] 2025-04-06 07:59:30,652 | INFO     | model: linear, x: [1743916040.0, 1743916101.0, 1743916162.0, 1743916223.0, 1743916284.0, 1743916345.0, 1743916406.0, 1743916467.0, 1743916528.0, 1743916589.0, 1743
[2025-04-06 10:01:01] 2025-04-06 07:59:30,652 | INFO     | sum of square deviations: 1523386702.5
[2025-04-06 10:01:01] 2025-04-06 07:59:30,653 | INFO     | sum of deviations: -23125612308.5
[2025-04-06 10:01:01] 2025-04-06 07:59:30,653 | INFO     | mean x: 1743921194.5
[2025-04-06 10:01:01] 2025-04-06 07:59:30,653 | INFO     | mean y: 2403164.9823529413
[2025-04-06 10:01:01] 2025-04-06 07:59:30,653 | INFO     | -- intersect: 26475816234.953156
[2025-04-06 10:01:01] 2025-04-06 07:59:30,653 | INFO     | intersect: 26475816234.953156
[2025-04-06 10:01:01] 2025-04-06 07:59:30,653 | INFO     | chi2: 0.8447232401323204
[2025-04-06 10:01:01] 2025-04-06 07:59:30,654 | INFO     | current chi2=0.8447232401323204 (change=48.936594085909704 %)
[2025-04-06 10:01:01] 2025-04-06 07:59:30,654 | INFO     | model: linear, x: [1743916345.0, 1743916406.0, 1743916467.0, 1743916528.0, 1743916589.0, 1743916650.0, 1743916711.0, 1743916772.0, 1743916833.0, 1743916894.0, 1743
[2025-04-06 10:01:01] 2025-04-06 07:59:30,654 | INFO     | sum of square deviations: 1392881930.0
[2025-04-06 10:01:01] 2025-04-06 07:59:30,655 | INFO     | sum of deviations: -19745192053.0
[2025-04-06 10:01:01] 2025-04-06 07:59:30,655 | INFO     | mean x: 1743921347.0
[2025-04-06 10:01:01] 2025-04-06 07:59:30,655 | INFO     | mean y: 2399182.303030303
[2025-04-06 10:01:01] 2025-04-06 07:59:30,655 | INFO     | -- intersect: 24723849852.455276
[2025-04-06 10:01:01] 2025-04-06 07:59:30,655 | INFO     | intersect: 24723849852.455276
[2025-04-06 10:01:01] 2025-04-06 07:59:30,655 | INFO     | chi2: 0.8305549287113871
[2025-04-06 10:01:01] 2025-04-06 07:59:30,655 | INFO     | current chi2=0.8305549287113871 (change=1.6772725962545851 %)
[2025-04-06 10:01:01] 2025-04-06 07:59:30,655 | INFO     | left removable region: 30
[2025-04-06 10:01:01] 2025-04-06 07:59:30,656 | INFO     | model: linear, x: [1743917260.0, 1743917321.0, 1743917382.0, 1743917443.0, 1743917504.0, 1743917565.0, 1743917626.0, 1743917687.0, 1743917748.0, 1743917809.0, 1743
[2025-04-06 10:01:01] 2025-04-06 07:59:30,656 | INFO     | sum of square deviations: 925859220.0
[2025-04-06 10:01:01] 2025-04-06 07:59:30,656 | INFO     | sum of deviations: 988098587.4999999
[2025-04-06 10:01:01] 2025-04-06 07:59:30,657 | INFO     | mean x: 1743921621.5
[2025-04-06 10:01:01] 2025-04-06 07:59:30,657 | INFO     | mean y: 2397826.2569444445
[2025-04-06 10:01:01] 2025-04-06 07:59:30,657 | INFO     | -- intersect: -1858756065.9242659
[2025-04-06 10:01:01] 2025-04-06 07:59:30,657 | INFO     | intersect: -1858756065.9242659
[2025-04-06 10:01:01] 2025-04-06 07:59:30,657 | INFO     | chi2: 0.006166652097992831
[2025-04-06 10:01:01] 2025-04-06 07:59:30,657 | INFO     | -- intersect: -1858756065.9242659
[2025-04-06 10:01:01] 2025-04-06 07:59:30,657 | INFO     | current memory leak: 1.07 B/s (using 144 data points, chi2=0.01)
[2025-04-06 10:01:01] 2025-04-06 07:59:30,658 | INFO     | ..............................
[2025-04-06 10:01:01] 2025-04-06 07:59:30,658 | INFO     | . Timing measurements:
[2025-04-06 10:01:01] 2025-04-06 07:59:30,658 | INFO     | . get job = 0 s
[2025-04-06 10:01:01] 2025-04-06 07:59:30,658 | INFO     | . initial setup = 1 s
[2025-04-06 10:01:01] 2025-04-06 07:59:30,658 | INFO     | . payload setup = 5 s
[2025-04-06 10:01:01] 2025-04-06 07:59:30,658 | INFO     | . stage-in = 0 s
[2025-04-06 10:01:01] 2025-04-06 07:59:30,658 | INFO     | . payload execution = 10933 s
[2025-04-06 10:01:01] 2025-04-06 07:59:30,658 | INFO     | . stage-out = 0 s
[2025-04-06 10:01:01] 2025-04-06 07:59:30,658 | INFO     | . log creation = 0 s
[2025-04-06 10:01:01] 2025-04-06 07:59:30,658 | INFO     | ..............................
[2025-04-06 10:01:01] 2025-04-06 07:59:30,798 | INFO     | 
[2025-04-06 10:01:01] 2025-04-06 07:59:30,798 | INFO     | job summary report
[2025-04-06 10:01:01] 2025-04-06 07:59:30,798 | INFO     | --------------------------------------------------
[2025-04-06 10:01:01] 2025-04-06 07:59:30,798 | INFO     | PanDA job id: 6584051466
[2025-04-06 10:01:01] 2025-04-06 07:59:30,798 | INFO     | task id: 43634898
[2025-04-06 10:01:01] 2025-04-06 07:59:30,799 | INFO     | errors: (none)
[2025-04-06 10:01:01] 2025-04-06 07:59:30,799 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-06 10:01:01] 2025-04-06 07:59:30,799 | INFO     | pilot state: finished 
[2025-04-06 10:01:01] 2025-04-06 07:59:30,799 | INFO     | transexitcode: 0
[2025-04-06 10:01:01] 2025-04-06 07:59:30,799 | INFO     | exeerrorcode: 0
[2025-04-06 10:01:01] 2025-04-06 07:59:30,799 | INFO     | exeerrordiag: 
[2025-04-06 10:01:01] 2025-04-06 07:59:30,799 | INFO     | exitcode: 0
[2025-04-06 10:01:01] 2025-04-06 07:59:30,799 | INFO     | exitmsg: OK
[2025-04-06 10:01:01] 2025-04-06 07:59:30,799 | INFO     | cpuconsumptiontime: 40763 s
[2025-04-06 10:01:01] 2025-04-06 07:59:30,799 | INFO     | nevents: 400
[2025-04-06 10:01:01] 2025-04-06 07:59:30,799 | INFO     | neventsw: 0
[2025-04-06 10:01:01] 2025-04-06 07:59:30,799 | INFO     | pid: 4069715
[2025-04-06 10:01:01] 2025-04-06 07:59:30,799 | INFO     | pgrp: 4069715
[2025-04-06 10:01:01] 2025-04-06 07:59:30,799 | INFO     | corecount: 4
[2025-04-06 10:01:01] 2025-04-06 07:59:30,799 | INFO     | event service: False
[2025-04-06 10:01:01] 2025-04-06 07:59:30,799 | INFO     | sizes: {0: 2417412, 1: 2417412, 5: 2417646, 11: 2417702, 10942: 2446765, 10943: 2455730, 10944: 2455914, 10951: 2456084}
[2025-04-06 10:01:01] 2025-04-06 07:59:30,800 | INFO     | --------------------------------------------------
[2025-04-06 10:01:01] 2025-04-06 07:59:30,800 | INFO     | 
[2025-04-06 10:01:01] 2025-04-06 07:59:30,800 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-04-06 10:01:01] 2025-04-06 07:59:30,820 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,821 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,821 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,821 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,821 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,821 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,821 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,821 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,821 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,821 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,821 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,821 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,822 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-06 10:01:01] 2025-04-06 07:59:30,822 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,822 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-06 10:01:01] 2025-04-06 07:59:30,822 | INFO     | job 6584051466 has completed (purged errors)
[2025-04-06 10:01:01] 2025-04-06 07:59:30,822 | INFO     | overall cleanup function is called
[2025-04-06 10:01:01] 2025-04-06 07:59:31,831 | INFO     | --- collectZombieJob: --- 10, [4069715]
[2025-04-06 10:01:01] 2025-04-06 07:59:31,831 | INFO     | zombie collector waiting for pid 4069715
[2025-04-06 10:01:01] 2025-04-06 07:59:31,831 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-06 10:01:01] 2025-04-06 07:59:31,831 | INFO     | collected zombie processes
[2025-04-06 10:01:01] 2025-04-06 07:59:31,831 | INFO     | will attempt to kill all subprocesses of pid=4069715
[2025-04-06 10:01:01] 2025-04-06 07:59:32,008 | INFO     | process IDs to be killed: [4069715] (in reverse order)
[2025-04-06 10:01:01] 2025-04-06 07:59:32,133 | WARNING  | found no corresponding commands to process id(s)
[2025-04-06 10:01:01] 2025-04-06 07:59:32,133 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-06 10:01:01] 2025-04-06 07:59:32,147 | INFO     | did not find any defunct processes belonging to 4069715
[2025-04-06 10:01:01] 2025-04-06 07:59:32,158 | INFO     | did not find any defunct processes belonging to 4069715
[2025-04-06 10:01:01] 2025-04-06 07:59:32,158 | INFO     | ready for new job
[2025-04-06 10:01:01] 2025-04-06 07:59:32,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-06 10:01:01] 2025-04-06 07:59:32,160 | INFO     | ***************************************
[2025-04-06 10:01:01] 2025-04-06 07:59:32,160 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-06 10:01:01] 2025-04-06 07:59:32,160 | INFO     | ***************************************
[2025-04-06 10:01:01] 2025-04-06 07:59:32,160 | INFO     | 
[2025-04-06 10:01:01] 2025-04-06 07:59:32,165 | INFO     | architecture information:
[2025-04-06 10:01:01] 2025-04-06 07:59:32,166 | INFO     | executing command: cat /etc/os-release
[2025-04-06 10:01:01] 2025-04-06 07:59:32,179 | INFO     | cat /etc/os-release:
[2025-04-06 10:01:01] NAME="CentOS Linux"
[2025-04-06 10:01:01] VERSION="7 (Core)"
[2025-04-06 10:01:01] ID="centos"
[2025-04-06 10:01:01] ID_LIKE="rhel fedora"
[2025-04-06 10:01:01] VERSION_ID="7"
[2025-04-06 10:01:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-06 10:01:01] ANSI_COLOR="0;31"
[2025-04-06 10:01:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-06 10:01:01] HOME_URL="https://www.centos.org/"
[2025-04-06 10:01:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-06 10:01:01] 
[2025-04-06 10:01:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-06 10:01:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-06 10:01:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-06 10:01:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-06 10:01:01] 
[2025-04-06 10:01:01] 2025-04-06 07:59:32,180 | INFO     | ***************************************
[2025-04-06 10:01:01] 2025-04-06 07:59:32,683 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-04-06 10:01:01] 2025-04-06 07:59:32,698 | INFO     | sufficient remaining disk space (3355307933696 B)
[2025-04-06 10:01:01] 2025-04-06 07:59:32,698 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-06 10:01:01] 2025-04-06 07:59:32,698 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-06 10:01:01] 2025-04-06 07:59:32,699 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-06 10:01:01] 2025-04-06 07:59:32,699 | INFO     | found 0 job(s) in 20 queues
[2025-04-06 10:01:01] 2025-04-06 07:59:32,699 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-06 10:01:01] 2025-04-06 07:59:32,699 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-06 10:01:01] 2025-04-06 07:59:32,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-06 10:01:01] 2025-04-06 07:59:32,700 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-06 10:01:01] 2025-04-06 07:59:32,700 | INFO     | aborting loop
[2025-04-06 10:01:01] 2025-04-06 07:59:32,807 | INFO     | all job control threads have been joined
[2025-04-06 10:01:01] 2025-04-06 07:59:32,818 | INFO     | all payload control threads have been joined
[2025-04-06 10:01:01] 2025-04-06 07:59:33,308 | INFO     | all data control threads have been joined
[2025-04-06 10:01:01] 2025-04-06 07:59:33,414 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-06 10:01:01] 2025-04-06 07:59:33,704 | INFO     | [job] retrieve thread has finished
[2025-04-06 10:01:01] 2025-04-06 07:59:33,706 | INFO     | [job] job monitor thread has finished
[2025-04-06 10:01:01] 2025-04-06 07:59:33,706 | INFO     | [job] queue monitor thread has finished
[2025-04-06 10:01:01] 2025-04-06 07:59:33,813 | INFO     | [job] control thread has finished
[2025-04-06 10:01:01] 2025-04-06 07:59:33,823 | INFO     | [payload] control thread has finished
[2025-04-06 10:01:01] 2025-04-06 07:59:34,081 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-06 10:01:01] 2025-04-06 07:59:34,178 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-06 10:01:01] 2025-04-06 07:59:34,194 | INFO     | [payload] validate_post thread has finished
[2025-04-06 10:01:01] 2025-04-06 07:59:34,313 | INFO     | [data] control thread has finished
[2025-04-06 10:01:01] 2025-04-06 07:59:34,594 | INFO     | [job] create_data_payload thread has finished
[2025-04-06 10:01:01] 2025-04-06 07:59:34,803 | INFO     | [payload] validate_pre thread has finished
[2025-04-06 10:01:01] 2025-04-06 07:59:34,973 | INFO     | [data] copytool_in thread has finished
[2025-04-06 10:01:01] 2025-04-06 07:59:34,973 | INFO     | [payload] execute_payloads thread has finished
[2025-04-06 10:01:01] 2025-04-06 07:59:34,973 | INFO     | [job] validate thread has finished
[2025-04-06 10:01:01] 2025-04-06 07:59:35,258 | INFO     | [payload] failed_post thread has finished
[2025-04-06 10:01:01] 2025-04-06 07:59:35,419 | INFO     | [data] copytool_out thread has finished
[2025-04-06 10:01:01] 2025-04-06 07:59:38,086 | INFO     | [data] queue_monitor thread has finished
[2025-04-06 10:01:01] 2025-04-06 07:59:39,633 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23230387300160)>', '<ExcThread(monitor, started 23230154770176)>']
[2025-04-06 10:01:01] 2025-04-06 07:59:39,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-06 10:01:01] 2025-04-06 07:59:39,736 | INFO     | [monitor] control thread has ended
[2025-04-06 10:01:01] 2025-04-06 07:59:44,660 | INFO     | all workflow threads have been joined
[2025-04-06 10:01:01] 2025-04-06 07:59:44,661 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-06 10:01:01] 2025-04-06 07:59:44,661 | INFO     | traces error code: 0
[2025-04-06 10:01:01] 2025-04-06 07:59:44,662 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-06 10:01:01] 2025-04-06 07:59:44,833 [wrapper] ==== pilot stdout END ====
[2025-04-06 10:01:01] 2025-04-06 07:59:44,836 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-06 10:01:01] 2025-04-06 07:59:44,839 [wrapper] pilotpid: 4062341
[2025-04-06 10:01:01] 2025-04-06 07:59:44,842 [wrapper] Pilot exit status: 0
[2025-04-06 10:01:01] 2025-04-06 07:59:44,854 [wrapper] pandaids: 6584051466
[2025-04-06 10:01:01] 2025-04-06 07:59:44,936 [wrapper] cleanup supervisor_pilot  129979 4062342
[2025-04-06 10:01:01] 2025-04-06 07:59:44,940 [wrapper] Test setup, not cleaning
[2025-04-06 10:01:01] 2025-04-06 07:59:44,943 [wrapper] apfmon messages muted
[2025-04-06 10:01:01] 2025-04-06 07:59:44,946 [wrapper] ==== wrapper stdout END ====
[2025-04-06 10:01:01] 2025-04-06 07:59:44,949 [wrapper] ==== wrapper stderr END ====
[2025-04-06 10:01:01]  *** Error codes and diagnostics ***
[2025-04-06 10:01:01]     "exeErrorCode": 0,
[2025-04-06 10:01:01]     "exeErrorDiag": "",
[2025-04-06 10:01:01]     "pilotErrorCode": 0,
[2025-04-06 10:01:01]     "pilotErrorDiag": "",
[2025-04-06 10:01:01]  *** Listing of results directory ***
[2025-04-06 10:01:01] total 666480
[2025-04-06 10:01:01] -rw-r--r-- 1 boinc boinc    494584 Apr  2 10:19 pilot3.tar.gz
[2025-04-06 10:01:01] -rwx------ 1 boinc boinc     37140 Apr  2 10:45 runpilot2-wrapper.sh
[2025-04-06 10:01:01] -rw-r--r-- 1 boinc boinc      5112 Apr  2 10:45 queuedata.json
[2025-04-06 10:01:01] -rw-r--r-- 1 boinc boinc       100 Apr  6 06:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-06 10:01:01] -rwxr-xr-x 1 boinc boinc      7986 Apr  6 06:56 run_atlas
[2025-04-06 10:01:01] -rw-r--r-- 1 boinc boinc       105 Apr  6 06:56 job.xml
[2025-04-06 10:01:01] -rw-r--r-- 1 boinc boinc      6678 Apr  6 06:56 init_data.xml
[2025-04-06 10:01:01] -rw-r--r-- 2 boinc boinc 356500530 Apr  6 06:56 EVNT.43634896._000414.pool.root.1
[2025-04-06 10:01:01] -rw-r--r-- 2 boinc boinc     17571 Apr  6 06:56 start_atlas.sh
[2025-04-06 10:01:01] drwxrwx--x 2 boinc boinc      4096 Apr  6 06:56 shared
[2025-04-06 10:01:01] -rw-r--r-- 2 boinc boinc    507248 Apr  6 06:56 input.tar.gz
[2025-04-06 10:01:01] -rw-r--r-- 1 boinc boinc         0 Apr  6 06:56 boinc_lockfile
[2025-04-06 10:01:01] -rw-r--r-- 1 boinc boinc      2600 Apr  6 06:56 pandaJob.out
[2025-04-06 10:01:01] -rw------- 1 boinc boinc       424 Apr  6 06:56 setup.sh.local
[2025-04-06 10:01:01] -rw------- 1 boinc boinc    980067 Apr  6 06:56 agis_schedconf.cvmfs.json
[2025-04-06 10:01:01] drwx------ 4 boinc boinc      4096 Apr  6 06:56 pilot3
[2025-04-06 10:01:01] -rw------- 1 boinc boinc 319256320 Apr  6 09:58 HITS.43634898._013051.pool.root.1
[2025-04-06 10:01:01] -rw-r--r-- 1 boinc boinc       529 Apr  6 09:59 boinc_task_state.xml
[2025-04-06 10:01:01] -rw------- 1 boinc boinc        95 Apr  6 09:59 pilot_heartbeat.json
[2025-04-06 10:01:01] -rw------- 1 boinc boinc      1026 Apr  6 09:59 memory_monitor_summary.json
[2025-04-06 10:01:01] -rw------- 1 boinc boinc   1603525 Apr  6 09:59 agis_ddmendpoints.agis.ALL.json
[2025-04-06 10:01:01] -rw------- 1 boinc boinc    319067 Apr  6 09:59 log.43634898._013051.job.log.tgz.1
[2025-04-06 10:01:01] -rw------- 1 boinc boinc      7696 Apr  6 09:59 heartbeat.json
[2025-04-06 10:01:01] -rw------- 1 boinc boinc      4354 Apr  6 09:59 pilotlog.txt
[2025-04-06 10:01:01] -rw------- 1 boinc boinc   1121903 Apr  6 09:59 log.43634898._013051.job.log.1
[2025-04-06 10:01:01] -rw------- 1 boinc boinc       357 Apr  6 09:59 output.list
[2025-04-06 10:01:01] -rw-r--r-- 1 boinc boinc       620 Apr  6 09:59 runtime_log
[2025-04-06 10:01:01] -rw------- 1 boinc boinc   1464320 Apr  6 09:59 result.tar.gz
[2025-04-06 10:01:01] -rw-r--r-- 1 boinc boinc     11444 Apr  6 09:59 runtime_log.err
[2025-04-06 10:01:01] -rw------- 1 boinc boinc       664 Apr  6 09:59 I4OODmzt8J7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmxIFLDmLwD6Fo.diag
[2025-04-06 10:01:01] -rw-r--r-- 1 boinc boinc        27 Apr  6 10:00 wrapper_checkpoint.txt
[2025-04-06 10:01:01] -rw-r--r-- 1 boinc boinc      8192 Apr  6 10:01 boinc_mmap_file
[2025-04-06 10:01:01] -rw-r--r-- 1 boinc boinc     21340 Apr  6 10:01 stderr.txt
[2025-04-06 10:01:01] HITS file was successfully produced:
[2025-04-06 10:01:01] -rw------- 1 boinc boinc 319256320 Apr  6 09:58 shared/HITS.pool.root.1
[2025-04-06 10:01:01]  *** Contents of shared directory: ***
[2025-04-06 10:01:01] total 661880
[2025-04-06 10:01:01] -rw-r--r-- 2 boinc boinc 356500530 Apr  6 06:56 ATLAS.root_0
[2025-04-06 10:01:01] -rw-r--r-- 2 boinc boinc     17571 Apr  6 06:56 start_atlas.sh
[2025-04-06 10:01:01] -rw-r--r-- 2 boinc boinc    507248 Apr  6 06:56 input.tar.gz
[2025-04-06 10:01:01] -rw------- 1 boinc boinc 319256320 Apr  6 09:58 HITS.pool.root.1
[2025-04-06 10:01:01] -rw------- 1 boinc boinc   1464320 Apr  6 09:59 result.tar.gz
10:01:02 (4057989): run_atlas exited; CPU time 40673.166435
10:01:02 (4057989): called boinc_finish(0)

</stderr_txt>
]]>

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