Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:31:52 (996742): wrapper (7.7.26015): starting
02:31:52 (996742): wrapper: running run_atlas (--nthreads 8)
[2025-04-03 02:31:52] Arguments: --nthreads 8
[2025-04-03 02:31:52] Threads: 8
[2025-04-03 02:31:52] Checking for CVMFS
[2025-04-03 02:31:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 02:31:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 02:31:52] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 02:31:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 02:31:54] 2.12.6.0 981265 15746 232520 144433 1 679 29203854 32935936 17591 130560 0 3339231 99.825 967807 8725 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-03 02:31:54] CVMFS is ok
[2025-04-03 02:31:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-03 02:31:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-03 02:31:54] Further information can be found at the LHC@home message board.
[2025-04-03 02:31:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 02:31:54] Checking for apptainer binary...
[2025-04-03 02:31:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 02:31:54] Running /usr/bin/apptainer --version
[2025-04-03 02:31:54] apptainer version 1.4.0-1.el9
[2025-04-03 02:31:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 02:31:54] c6-4-5-1.aglt2.org
[2025-04-03 02:31:54] apptainer works
[2025-04-03 02:31:54] Set ATHENA_PROC_NUMBER=8
[2025-04-03 02:31:54] Set ATHENA_CORE_NUMBER=8
[2025-04-03 02:31:55] Starting ATLAS job with PandaID=6584906466
[2025-04-03 02:31:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-03 09:56:20]  *** The last 200 lines of the pilot log: ***
[2025-04-03 09:56:20] 2025-04-03 13:55:42,869 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-03 09:56:20] 2025-04-03 13:55:42,892 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-03 09:56:20] 2025-04-03 13:55:42,892 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-03 09:56:20] 2025-04-03 13:55:42,954 | INFO     | fitting pss+swap vs Time
[2025-04-03 09:56:20] 2025-04-03 13:55:42,955 | INFO     | model: linear, x: [1743662104.0, 1743662165.0, 1743662226.0, 1743662287.0, 1743662348.0, 1743662409.0, 1743662470.0, 1743662531.0, 1743662592.0, 1743662653.0, 1743
[2025-04-03 09:56:20] 2025-04-03 13:55:42,956 | INFO     | sum of square deviations: 25172944275.293358
[2025-04-03 09:56:20] 2025-04-03 13:55:42,993 | INFO     | sum of deviations: 46229815191.15251
[2025-04-03 09:56:20] 2025-04-03 13:55:42,993 | INFO     | mean x: 1743675280.2078521
[2025-04-03 09:56:20] 2025-04-03 13:55:42,994 | INFO     | mean y: 2086315.131639723
[2025-04-03 09:56:20] 2025-04-03 13:55:42,994 | INFO     | -- intersect: -3200152766.4725986
[2025-04-03 09:56:20] 2025-04-03 13:55:42,994 | INFO     | intersect: -3200152766.4725986
[2025-04-03 09:56:20] 2025-04-03 13:55:42,994 | INFO     | chi2: 7.938234067353177
[2025-04-03 09:56:20] 2025-04-03 13:55:43,027 | INFO     | model: linear, x: [1743662104.0, 1743662165.0, 1743662226.0, 1743662287.0, 1743662348.0, 1743662409.0, 1743662470.0, 1743662531.0, 1743662592.0, 1743662653.0, 1743
[2025-04-03 09:56:20] 2025-04-03 13:55:43,028 | INFO     | sum of square deviations: 24310946260.07457
[2025-04-03 09:56:20] 2025-04-03 13:55:43,071 | INFO     | sum of deviations: 136659323470.89728
[2025-04-03 09:56:20] 2025-04-03 13:55:43,071 | INFO     | mean x: 1743675127.7102804
[2025-04-03 09:56:20] 2025-04-03 13:55:43,071 | INFO     | mean y: 2102276.523364486
[2025-04-03 09:56:20] 2025-04-03 13:55:43,071 | INFO     | -- intersect: -9799633153.958658
[2025-04-03 09:56:20] 2025-04-03 13:55:43,072 | INFO     | intersect: -9799633153.958658
[2025-04-03 09:56:20] 2025-04-03 13:55:43,072 | INFO     | chi2: 5.239734127091693
[2025-04-03 09:56:20] 2025-04-03 13:55:43,072 | INFO     | current chi2=5.239734127091693 (change=33.9937058716793 %)
[2025-04-03 09:56:20] 2025-04-03 13:55:43,073 | INFO     | model: linear, x: [1743662104.0, 1743662165.0, 1743662226.0, 1743662287.0, 1743662348.0, 1743662409.0, 1743662470.0, 1743662531.0, 1743662592.0, 1743662653.0, 1743
[2025-04-03 09:56:20] 2025-04-03 13:55:43,073 | INFO     | sum of square deviations: 23468855594.851025
[2025-04-03 09:56:20] 2025-04-03 13:55:43,142 | INFO     | sum of deviations: 135626373869.3619
[2025-04-03 09:56:20] 2025-04-03 13:55:43,143 | INFO     | mean x: 1743674975.212766
[2025-04-03 09:56:20] 2025-04-03 13:55:43,143 | INFO     | mean y: 2102088.11820331
[2025-04-03 09:56:20] 2025-04-03 13:55:43,143 | INFO     | -- intersect: -10074584997.840157
[2025-04-03 09:56:20] 2025-04-03 13:55:43,143 | INFO     | intersect: -10074584997.840157
[2025-04-03 09:56:20] 2025-04-03 13:55:43,143 | INFO     | chi2: 5.240960378069014
[2025-04-03 09:56:20] 2025-04-03 13:55:43,144 | INFO     | current chi2=5.240960378069014 (change=-0.02340292365180143 %)
[2025-04-03 09:56:20] 2025-04-03 13:55:43,144 | INFO     | right removable region: 422
[2025-04-03 09:56:20] 2025-04-03 13:55:43,144 | INFO     | model: linear, x: [1743662409.0, 1743662470.0, 1743662531.0, 1743662592.0, 1743662653.0, 1743662714.0, 1743662775.0, 1743662836.0, 1743662897.0, 1743662958.0, 1743
[2025-04-03 09:56:20] 2025-04-03 13:55:43,172 | INFO     | sum of square deviations: 24310891360.07456
[2025-04-03 09:56:20] 2025-04-03 13:55:43,209 | INFO     | sum of deviations: -44504948971.925156
[2025-04-03 09:56:20] 2025-04-03 13:55:43,214 | INFO     | mean x: 1743675432.7102804
[2025-04-03 09:56:20] 2025-04-03 13:55:43,214 | INFO     | mean y: 2102338.9602803737
[2025-04-03 09:56:20] 2025-04-03 13:55:43,214 | INFO     | -- intersect: 3194177240.986109
[2025-04-03 09:56:20] 2025-04-03 13:55:43,214 | INFO     | intersect: 3194177240.986109
[2025-04-03 09:56:20] 2025-04-03 13:55:43,215 | INFO     | chi2: 5.453419281136982
[2025-04-03 09:56:20] 2025-04-03 13:55:43,215 | INFO     | current chi2=5.453419281136982 (change=31.301858387311317 %)
[2025-04-03 09:56:20] 2025-04-03 13:55:43,215 | INFO     | model: linear, x: [1743662714.0, 1743662775.0, 1743662836.0, 1743662897.0, 1743662958.0, 1743663019.0, 1743663081.0, 1743663141.0, 1743663202.0, 1743663264.0, 1743
[2025-04-03 09:56:20] 2025-04-03 13:55:43,215 | INFO     | sum of square deviations: 23468745794.851025
[2025-04-03 09:56:20] 2025-04-03 13:55:43,219 | INFO     | sum of deviations: -104041434884.51068
[2025-04-03 09:56:20] 2025-04-03 13:55:43,219 | INFO     | mean x: 1743675585.212766
[2025-04-03 09:56:20] 2025-04-03 13:55:43,219 | INFO     | mean y: 2113112.427895981
[2025-04-03 09:56:20] 2025-04-03 13:55:43,220 | INFO     | -- intersect: 7732160190.547719
[2025-04-03 09:56:20] 2025-04-03 13:55:43,220 | INFO     | intersect: 7732160190.547719
[2025-04-03 09:56:20] 2025-04-03 13:55:43,220 | INFO     | chi2: 4.424139639780091
[2025-04-03 09:56:20] 2025-04-03 13:55:43,220 | INFO     | current chi2=4.424139639780091 (change=18.87402358584643 %)
[2025-04-03 09:56:20] 2025-04-03 13:55:43,220 | INFO     | left removable region: 20
[2025-04-03 09:56:20] 2025-04-03 13:55:43,221 | INFO     | model: linear, x: [1743663324.0, 1743663386.0, 1743663446.0, 1743663507.0, 1743663568.0, 1743663629.0, 1743663690.0, 1743663751.0, 1743663812.0, 1743663873.0, 1743
[2025-04-03 09:56:20] 2025-04-03 13:55:43,227 | INFO     | sum of square deviations: 20144019939.67167
[2025-04-03 09:56:20] 2025-04-03 13:55:43,230 | INFO     | sum of deviations: -83032074247.71643
[2025-04-03 09:56:20] 2025-04-03 13:55:43,235 | INFO     | mean x: 1743675554.716418
[2025-04-03 09:56:20] 2025-04-03 13:55:43,235 | INFO     | mean y: 2143882.3358208956
[2025-04-03 09:56:20] 2025-04-03 13:55:43,235 | INFO     | -- intersect: 7189438104.479129
[2025-04-03 09:56:20] 2025-04-03 13:55:43,235 | INFO     | intersect: 7189438104.479129
[2025-04-03 09:56:20] 2025-04-03 13:55:43,236 | INFO     | chi2: 0.634653724219623
[2025-04-03 09:56:20] 2025-04-03 13:55:43,236 | INFO     | -- intersect: 7189438104.479129
[2025-04-03 09:56:20] 2025-04-03 13:55:43,236 | INFO     | current memory leak: -4.12 B/s (using 402 data points, chi2=0.63)
[2025-04-03 09:56:20] 2025-04-03 13:55:43,237 | INFO     | ..............................
[2025-04-03 09:56:20] 2025-04-03 13:55:43,237 | INFO     | . Timing measurements:
[2025-04-03 09:56:20] 2025-04-03 13:55:43,237 | INFO     | . get job = 0 s
[2025-04-03 09:56:20] 2025-04-03 13:55:43,237 | INFO     | . initial setup = 6 s
[2025-04-03 09:56:20] 2025-04-03 13:55:43,237 | INFO     | . payload setup = 34 s
[2025-04-03 09:56:20] 2025-04-03 13:55:43,237 | INFO     | . stage-in = 0 s
[2025-04-03 09:56:20] 2025-04-03 13:55:43,237 | INFO     | . payload execution = 26412 s
[2025-04-03 09:56:20] 2025-04-03 13:55:43,237 | INFO     | . stage-out = 8 s
[2025-04-03 09:56:20] 2025-04-03 13:55:43,237 | INFO     | . log creation = 1 s
[2025-04-03 09:56:20] 2025-04-03 13:55:43,237 | INFO     | ..............................
[2025-04-03 09:56:20] 2025-04-03 13:55:43,725 | INFO     | 
[2025-04-03 09:56:20] 2025-04-03 13:55:43,725 | INFO     | job summary report
[2025-04-03 09:56:20] 2025-04-03 13:55:43,725 | INFO     | --------------------------------------------------
[2025-04-03 09:56:20] 2025-04-03 13:55:43,725 | INFO     | PanDA job id: 6584906466
[2025-04-03 09:56:20] 2025-04-03 13:55:43,725 | INFO     | task id: 44004367
[2025-04-03 09:56:20] 2025-04-03 13:55:43,725 | INFO     | errors: (none)
[2025-04-03 09:56:20] 2025-04-03 13:55:43,725 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-03 09:56:20] 2025-04-03 13:55:43,725 | INFO     | pilot state: finished 
[2025-04-03 09:56:20] 2025-04-03 13:55:43,725 | INFO     | transexitcode: 0
[2025-04-03 09:56:20] 2025-04-03 13:55:43,725 | INFO     | exeerrorcode: 0
[2025-04-03 09:56:20] 2025-04-03 13:55:43,726 | INFO     | exeerrordiag: 
[2025-04-03 09:56:20] 2025-04-03 13:55:43,726 | INFO     | exitcode: 0
[2025-04-03 09:56:20] 2025-04-03 13:55:43,726 | INFO     | exitmsg: OK
[2025-04-03 09:56:20] 2025-04-03 13:55:43,726 | INFO     | cpuconsumptiontime: 44449 s
[2025-04-03 09:56:20] 2025-04-03 13:55:43,726 | INFO     | nevents: 400
[2025-04-03 09:56:20] 2025-04-03 13:55:43,726 | INFO     | neventsw: 0
[2025-04-03 09:56:20] 2025-04-03 13:55:43,726 | INFO     | pid: 1023593
[2025-04-03 09:56:20] 2025-04-03 13:55:43,726 | INFO     | pgrp: 1023593
[2025-04-03 09:56:20] 2025-04-03 13:55:43,726 | INFO     | corecount: 8
[2025-04-03 09:56:20] 2025-04-03 13:55:43,726 | INFO     | event service: False
[2025-04-03 09:56:20] 2025-04-03 13:55:43,726 | INFO     | sizes: {0: 2417061, 1: 2417089, 2: 2417260, 12: 2417288, 23: 2417316, 34: 2417344, 36: 2417706, 45: 2417734, 26452: 2453822, 26453: 2453821, 26461: 2463244, 26502:
[2025-04-03 09:56:20] 2025-04-03 13:55:43,726 | INFO     | --------------------------------------------------
[2025-04-03 09:56:20] 2025-04-03 13:55:43,726 | INFO     | 
[2025-04-03 09:56:20] 2025-04-03 13:55:43,726 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-03 09:56:20] 2025-04-03 13:55:43,759 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,761 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,761 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,763 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,763 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,763 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,763 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,763 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,763 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,763 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,763 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,763 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,763 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,764 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,764 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,764 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,764 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,764 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-03 09:56:20] 2025-04-03 13:55:43,764 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,764 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-03 09:56:20] 2025-04-03 13:55:43,764 | INFO     | job 6584906466 has completed (purged errors)
[2025-04-03 09:56:20] 2025-04-03 13:55:43,764 | INFO     | overall cleanup function is called
[2025-04-03 09:56:20] 2025-04-03 13:55:44,772 | INFO     | --- collectZombieJob: --- 10, [1023593]
[2025-04-03 09:56:20] 2025-04-03 13:55:44,772 | INFO     | zombie collector waiting for pid 1023593
[2025-04-03 09:56:20] 2025-04-03 13:55:44,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-03 09:56:20] 2025-04-03 13:55:44,772 | INFO     | collected zombie processes
[2025-04-03 09:56:20] 2025-04-03 13:55:44,772 | INFO     | will attempt to kill all subprocesses of pid=1023593
[2025-04-03 09:56:20] 2025-04-03 13:55:45,158 | INFO     | process IDs to be killed: [1023593] (in reverse order)
[2025-04-03 09:56:20] 2025-04-03 13:55:45,397 | WARNING  | found no corresponding commands to process id(s)
[2025-04-03 09:56:20] 2025-04-03 13:55:45,397 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-03 09:56:20] 2025-04-03 13:55:45,426 | INFO     | did not find any defunct processes belonging to 1023593
[2025-04-03 09:56:20] 2025-04-03 13:55:45,450 | INFO     | did not find any defunct processes belonging to 1023593
[2025-04-03 09:56:20] 2025-04-03 13:55:45,450 | INFO     | ready for new job
[2025-04-03 09:56:20] 2025-04-03 13:55:45,451 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-03 09:56:20] 2025-04-03 13:55:45,456 | INFO     | ***************************************
[2025-04-03 09:56:20] 2025-04-03 13:55:45,457 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-03 09:56:20] 2025-04-03 13:55:45,458 | INFO     | ***************************************
[2025-04-03 09:56:20] 2025-04-03 13:55:45,458 | INFO     | 
[2025-04-03 09:56:20] 2025-04-03 13:55:45,475 | INFO     | architecture information:
[2025-04-03 09:56:20] 2025-04-03 13:55:45,479 | INFO     | executing command: cat /etc/os-release
[2025-04-03 09:56:20] 2025-04-03 13:55:45,564 | INFO     | cat /etc/os-release:
[2025-04-03 09:56:20] NAME="CentOS Linux"
[2025-04-03 09:56:20] VERSION="7 (Core)"
[2025-04-03 09:56:20] ID="centos"
[2025-04-03 09:56:20] ID_LIKE="rhel fedora"
[2025-04-03 09:56:20] VERSION_ID="7"
[2025-04-03 09:56:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-03 09:56:20] ANSI_COLOR="0;31"
[2025-04-03 09:56:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-03 09:56:20] HOME_URL="https://www.centos.org/"
[2025-04-03 09:56:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-03 09:56:20] 
[2025-04-03 09:56:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-03 09:56:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-03 09:56:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-03 09:56:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-03 09:56:20] 
[2025-04-03 09:56:20] 2025-04-03 13:55:45,564 | INFO     | ***************************************
[2025-04-03 09:56:20] 2025-04-03 13:55:46,070 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-03 09:56:20] 2025-04-03 13:55:46,171 | INFO     | sufficient remaining disk space (71865204736 B)
[2025-04-03 09:56:20] 2025-04-03 13:55:46,171 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-03 09:56:20] 2025-04-03 13:55:46,172 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-03 09:56:20] 2025-04-03 13:55:46,172 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-03 09:56:20] 2025-04-03 13:55:46,172 | INFO     | aborting loop
[2025-04-03 09:56:20] 2025-04-03 13:55:46,172 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-03 09:56:20] 2025-04-03 13:55:46,302 | INFO     | all payload control threads have been joined
[2025-04-03 09:56:20] 2025-04-03 13:55:46,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-03 09:56:20] 2025-04-03 13:55:46,810 | INFO     | found 0 job(s) in 20 queues
[2025-04-03 09:56:20] 2025-04-03 13:55:46,810 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-03 09:56:20] 2025-04-03 13:55:46,810 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-03 09:56:20] 2025-04-03 13:55:47,066 | INFO     | all data control threads have been joined
[2025-04-03 09:56:20] 2025-04-03 13:55:47,178 | INFO     | [job] retrieve thread has finished
[2025-04-03 09:56:20] 2025-04-03 13:55:47,184 | INFO     | [job] job monitor thread has finished
[2025-04-03 09:56:20] 2025-04-03 13:55:47,280 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-03 09:56:20] 2025-04-03 13:55:47,286 | INFO     | [payload] failed_post thread has finished
[2025-04-03 09:56:20] 2025-04-03 13:55:47,321 | INFO     | [payload] control thread has finished
[2025-04-03 09:56:20] 2025-04-03 13:55:47,517 | INFO     | [data] copytool_in thread has finished
[2025-04-03 09:56:20] 2025-04-03 13:55:47,611 | INFO     | [payload] validate_post thread has finished
[2025-04-03 09:56:20] 2025-04-03 13:55:47,674 | INFO     | all job control threads have been joined
[2025-04-03 09:56:20] 2025-04-03 13:55:48,072 | INFO     | [data] control thread has finished
[2025-04-03 09:56:20] 2025-04-03 13:55:48,226 | INFO     | [job] validate thread has finished
[2025-04-03 09:56:20] 2025-04-03 13:55:48,245 | INFO     | [payload] validate_pre thread has finished
[2025-04-03 09:56:20] 2025-04-03 13:55:48,314 | INFO     | [payload] execute_payloads thread has finished
[2025-04-03 09:56:20] 2025-04-03 13:55:48,351 | INFO     | [data] copytool_out thread has finished
[2025-04-03 09:56:20] 2025-04-03 13:55:48,383 | INFO     | [job] create_data_payload thread has finished
[2025-04-03 09:56:20] 2025-04-03 13:55:48,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-03 09:56:20] 2025-04-03 13:55:48,689 | INFO     | [job] control thread has finished
[2025-04-03 09:56:20] 2025-04-03 13:55:49,493 | INFO     | [job] queue monitor thread has finished
[2025-04-03 09:56:20] 2025-04-03 13:55:50,181 | INFO     | [data] queue_monitor thread has finished
[2025-04-03 09:56:20] 2025-04-03 13:55:51,153 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140114502293312)>', '<ExcThread(monitor, started 140113627567872)>']
[2025-04-03 09:56:20] 2025-04-03 13:55:51,850 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-03 09:56:20] 2025-04-03 13:55:51,850 | INFO     | [monitor] control thread has ended
[2025-04-03 09:56:20] 2025-04-03 13:55:56,185 | INFO     | all workflow threads have been joined
[2025-04-03 09:56:20] 2025-04-03 13:55:56,185 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-03 09:56:20] 2025-04-03 13:55:56,185 | INFO     | traces error code: 0
[2025-04-03 09:56:20] 2025-04-03 13:55:56,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-03 09:56:20] 2025-04-03 13:55:58,034 [wrapper] ==== pilot stdout END ====
[2025-04-03 09:56:20] 2025-04-03 13:55:58,042 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-03 09:56:20] 2025-04-03 13:55:58,046 [wrapper] pilotpid: 1005186
[2025-04-03 09:56:20] 2025-04-03 13:55:58,049 [wrapper] Pilot exit status: 0
[2025-04-03 09:56:20] 2025-04-03 13:55:58,182 [wrapper] pandaids: 6584906466
[2025-04-03 09:56:20] 2025-04-03 13:55:58,368 [wrapper] cleanup supervisor_pilot 3773084 1005187
[2025-04-03 09:56:20] 2025-04-03 13:55:58,390 [wrapper] Test setup, not cleaning
[2025-04-03 09:56:20] 2025-04-03 13:55:58,401 [wrapper] apfmon messages muted
[2025-04-03 09:56:20] 2025-04-03 13:55:58,416 [wrapper] ==== wrapper stdout END ====
[2025-04-03 09:56:20] 2025-04-03 13:55:58,463 [wrapper] ==== wrapper stderr END ====
[2025-04-03 09:56:20]  *** Error codes and diagnostics ***
[2025-04-03 09:56:20]     "exeErrorCode": 0,
[2025-04-03 09:56:20]     "exeErrorDiag": "",
[2025-04-03 09:56:20]     "pilotErrorCode": 0,
[2025-04-03 09:56:20]     "pilotErrorDiag": "",
[2025-04-03 09:56:20]  *** Listing of results directory ***
[2025-04-03 09:56:20] total 414836
[2025-04-03 09:56:20] -rw-r--r--. 1 boincer umatlas    494584 Apr  2 21:28 pilot3.tar.gz
[2025-04-03 09:56:20] -rw-r--r--. 1 boincer umatlas      5112 Apr  2 21:35 queuedata.json
[2025-04-03 09:56:20] -rwx------. 1 boincer umatlas     37140 Apr  2 21:38 runpilot2-wrapper.sh
[2025-04-03 09:56:20] -rw-r--r--. 1 boincer umatlas       100 Apr  3 02:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-03 09:56:20] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  3 02:31 run_atlas
[2025-04-03 09:56:20] -rw-r--r--. 1 boincer umatlas       105 Apr  3 02:31 job.xml
[2025-04-03 09:56:20] -rw-r--r--. 2 boincer umatlas 220879365 Apr  3 02:31 EVNT.44004365._000238.pool.root.1
[2025-04-03 09:56:20] -rw-r--r--. 2 boincer umatlas     17571 Apr  3 02:31 start_atlas.sh
[2025-04-03 09:56:20] drwxrwx--x. 2 boincer umatlas      4096 Apr  3 02:31 shared
[2025-04-03 09:56:20] -rw-r--r--. 2 boincer umatlas    507240 Apr  3 02:31 input.tar.gz
[2025-04-03 09:56:20] -rw-r--r--. 1 boincer umatlas         0 Apr  3 02:31 boinc_lockfile
[2025-04-03 09:56:20] -rw-r--r--. 1 boincer umatlas      2548 Apr  3 02:31 pandaJob.out
[2025-04-03 09:56:20] -rw-------. 1 boincer umatlas       467 Apr  3 02:31 setup.sh.local
[2025-04-03 09:56:20] -rw-------. 1 boincer umatlas    991169 Apr  3 02:32 agis_schedconf.cvmfs.json
[2025-04-03 09:56:20] drwx------. 4 boincer umatlas      4096 Apr  3 02:32 pilot3
[2025-04-03 09:56:20] -rw-------. 1 boincer umatlas 193159465 Apr  3 09:50 HITS.44004367._005939.pool.root.1
[2025-04-03 09:56:20] -rw-r--r--. 1 boincer umatlas       531 Apr  3 09:50 boinc_task_state.xml
[2025-04-03 09:56:20] -rw-r--r--. 1 boincer umatlas      6871 Apr  3 09:54 init_data.xml
[2025-04-03 09:56:20] -rw-------. 1 boincer umatlas      1069 Apr  3 09:54 memory_monitor_summary.json
[2025-04-03 09:56:20] -rw-------. 1 boincer umatlas        95 Apr  3 09:54 pilot_heartbeat.json
[2025-04-03 09:56:20] -rw-------. 1 boincer umatlas   1603525 Apr  3 09:54 agis_ddmendpoints.agis.ALL.json
[2025-04-03 09:56:20] -rw-------. 1 boincer umatlas    558493 Apr  3 09:55 log.44004367._005939.job.log.tgz.1
[2025-04-03 09:56:20] -rw-------. 1 boincer umatlas      7742 Apr  3 09:55 heartbeat.json
[2025-04-03 09:56:20] -rw-------. 1 boincer umatlas      4219 Apr  3 09:55 pilotlog.txt
[2025-04-03 09:56:20] -rw-------. 1 boincer umatlas   2896190 Apr  3 09:55 log.44004367._005939.job.log.1
[2025-04-03 09:56:20] -rw-------. 1 boincer umatlas       357 Apr  3 09:55 output.list
[2025-04-03 09:56:20] -rw-r--r--. 1 boincer umatlas       620 Apr  3 09:55 runtime_log
[2025-04-03 09:56:20] -rw-------. 1 boincer umatlas   3471360 Apr  3 09:55 result.tar.gz
[2025-04-03 09:56:20] -rw-r--r--. 1 boincer umatlas     11420 Apr  3 09:55 runtime_log.err
[2025-04-03 09:56:20] -rw-------. 1 boincer umatlas       661 Apr  3 09:55 hj7LDmCiOK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmVNGLDmFWZZOn.diag
[2025-04-03 09:56:20] -rw-r--r--. 1 boincer umatlas      8192 Apr  3 09:56 boinc_mmap_file
[2025-04-03 09:56:20] -rw-r--r--. 1 boincer umatlas        28 Apr  3 09:56 wrapper_checkpoint.txt
[2025-04-03 09:56:20] -rw-r--r--. 1 boincer umatlas     21621 Apr  3 09:56 stderr.txt
[2025-04-03 09:56:20] HITS file was successfully produced:
[2025-04-03 09:56:20] -rw-------. 1 boincer umatlas 193159465 Apr  3 09:50 shared/HITS.pool.root.1
[2025-04-03 09:56:20]  *** Contents of shared directory: ***
[2025-04-03 09:56:20] total 408256
[2025-04-03 09:56:20] -rw-r--r--. 2 boincer umatlas 220879365 Apr  3 02:31 ATLAS.root_0
[2025-04-03 09:56:20] -rw-r--r--. 2 boincer umatlas     17571 Apr  3 02:31 start_atlas.sh
[2025-04-03 09:56:20] -rw-r--r--. 2 boincer umatlas    507240 Apr  3 02:31 input.tar.gz
[2025-04-03 09:56:20] -rw-------. 1 boincer umatlas 193159465 Apr  3 09:50 HITS.pool.root.1
[2025-04-03 09:56:20] -rw-------. 1 boincer umatlas   3471360 Apr  3 09:55 result.tar.gz
09:56:22 (996742): run_atlas exited; CPU time 44477.013664
09:56:22 (996742): called boinc_finish(0)

</stderr_txt>
]]>

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