Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:20:29 (25493): wrapper (7.7.26015): starting
09:20:29 (25493): wrapper: running run_atlas (--nthreads 12)
[2025-04-03 09:20:29] Arguments: --nthreads 12
[2025-04-03 09:20:29] Threads: 12
[2025-04-03 09:20:29] Checking for CVMFS
[2025-04-03 09:20:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 09:20:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 09:20:30] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 09:20:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 09:20:30] 2.11.2.0 15118 3998 98572 144436 3 12 24103083 25165824 0 130560 0 29076296 99.999 1118628 11398 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-04-03 09:20:30] CVMFS is ok
[2025-04-03 09:20:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 09:20:30] Checking for apptainer binary...
[2025-04-03 09:20:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 09:20:30] Running /usr/bin/apptainer --version
[2025-04-03 09:20:31] apptainer version 1.3.2-1.el7
[2025-04-03 09:20:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 09:20:35] cg-vwn116.simple-grid.lan
[2025-04-03 09:20:35] apptainer works
[2025-04-03 09:20:35] Set ATHENA_PROC_NUMBER=12
[2025-04-03 09:20:35] Set ATHENA_CORE_NUMBER=12
[2025-04-03 09:20:35] Starting ATLAS job with PandaID=6584895396
[2025-04-03 09:20:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-03 09:29:41]  *** The last 200 lines of the pilot log: ***
[2025-04-03 09:29:41] 2025-04-03 07:29:23,798 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-03 09:29:41] 2025-04-03 07:29:26,301 | INFO     | monitor loop #146: job 0:6584895396 is in state 'failed'
[2025-04-03 09:29:41] 2025-04-03 07:29:26,302 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-03 09:29:41] 2025-04-03 07:29:27,842 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-03 09:29:41] 2025-04-03 07:29:27,844 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6584895396/memory_monitor_output.txt
[2025-04-03 09:29:41] 2025-04-03 07:29:27,844 | INFO     | memory summary dictionary not yet available
[2025-04-03 09:29:41] 2025-04-03 07:29:27,845 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-03 09:29:41] 2025-04-03 07:29:27,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-03 09:29:41] 2025-04-03 07:29:27,847 | INFO     | ..............................
[2025-04-03 09:29:41] 2025-04-03 07:29:27,848 | INFO     | . Timing measurements:
[2025-04-03 09:29:41] 2025-04-03 07:29:27,849 | INFO     | . get job = 0 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,849 | INFO     | . initial setup = 3 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,849 | INFO     | . payload setup = 24 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,850 | INFO     | . stage-in = 0 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,851 | INFO     | . payload execution = 233 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,851 | INFO     | . stage-out = 0 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,851 | INFO     | . log creation = 0 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,852 | INFO     | ..............................
[2025-04-03 09:29:41] 2025-04-03 07:29:27,852 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-03 09:29:41] 2025-04-03 07:29:27,853 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6584895396/pilotlog.txt
[2025-04-03 09:29:41] 2025-04-03 07:29:27,911 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-04-03 09:29:41] - Log from pilotlog.txt -
[2025-04-03 09:29:41] 2025-04-03 07:29:23,798 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-03 09:29:41] 2025-04-03 07:29:26,301 | INFO     | monitor loop #146: job 0:6584895396 is in state 'failed'
[2025-04-03 09:29:41] 2025-04-03 07:29:26,302 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-03 09:29:41] 2025-04-03 07:29:27,842 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-03 09:29:41] 2025-04-03 07:29:27,844 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6584895396/memory_monitor_output.txt
[2025-04-03 09:29:41] 2025-04-03 07:29:27,844 | INFO     | memory summary dictionary not yet available
[2025-04-03 09:29:41] 2025-04-03 07:29:27,845 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-03 09:29:41] 2025-04-03 07:29:27,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-03 09:29:41] 2025-04-03 07:29:27,847 | INFO     | ..............................
[2025-04-03 09:29:41] 2025-04-03 07:29:27,848 | INFO     | . Timing measurements:
[2025-04-03 09:29:41] 2025-04-03 07:29:27,849 | INFO     | . get job = 0 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,849 | INFO     | . initial setup = 3 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,849 | INFO     | . payload setup = 24 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,850 | INFO     | . stage-in = 0 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,851 | INFO     | . payload execution = 233 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,851 | INFO     | . stage-out = 0 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,851 | INFO     | . log creation = 0 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,852 | INFO     | ..............................
[2025-04-03 09:29:41] 2025-04-03 07:29:27,852 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-03 09:29:41] 2025-04-03 07:29:27,853 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6584895396/pilotlog.txt
[2025-04-03 09:29:41] 2025-04-03 07:29:27,912 | WARNING  | 
[2025-04-03 09:29:41] [begin log extracts]
[2025-04-03 09:29:41] - Log from pilotlog.txt -
[2025-04-03 09:29:41] 2025-04-03 07:29:23,798 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-03 09:29:41] 2025-04-03 07:29:26,301 | INFO     | monitor loop #146: job 0:6584895396 is in state 'failed'
[2025-04-03 09:29:41] 2025-04-03 07:29:26,302 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-03 09:29:41] 2025-04-03 07:29:27,842 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-03 09:29:41] 2025-04-03 07:29:27,844 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6584895396/memory_monitor_output.txt
[2025-04-03 09:29:41] 2025-04-03 07:29:27,844 | INFO     | memory summary dictionary not yet available
[2025-04-03 09:29:41] 2025-04-03 07:29:27,845 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-03 09:29:41] 2025-04-03 07:29:27,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-03 09:29:41] 2025-04-03 07:29:27,847 | INFO     | ..............................
[2025-04-03 09:29:41] 2025-04-03 07:29:27,848 | INFO     | . Timing measurements:
[2025-04-03 09:29:41] 2025-04-03 07:29:27,849 | INFO     | . get job = 0 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,849 | INFO     | . initial setup = 3 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,849 | INFO     | . payload setup = 24 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,850 | INFO     | . stage-in = 0 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,851 | INFO     | . payload execution = 233 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,851 | INFO     | . stage-out = 0 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,851 | INFO     | . log creation = 0 s
[2025-04-03 09:29:41] 2025-04-03 07:29:27,852 | INFO     | ..............................
[2025-04-03 09:29:41] 2025-04-03 07:29:27,852 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-03 09:29:41] 2025-04-03 07:29:27,853 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6584895396/pilotlog.txt
[2025-04-03 09:29:41] [end log extracts]
[2025-04-03 09:29:41] 2025-04-03 07:29:27,913 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-04-03 09:29:41] 2025-04-03 07:29:27,915 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-04-03 09:29:41] 2025-04-03 07:29:28,090 | INFO     | 
[2025-04-03 09:29:41] 2025-04-03 07:29:28,091 | INFO     | job summary report
[2025-04-03 09:29:41] 2025-04-03 07:29:28,092 | INFO     | --------------------------------------------------
[2025-04-03 09:29:41] 2025-04-03 07:29:28,092 | INFO     | PanDA job id: 6584895396
[2025-04-03 09:29:41] 2025-04-03 07:29:28,093 | INFO     | task id: 44004367
[2025-04-03 09:29:41] 2025-04-03 07:29:28,093 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-04-03 07:26:02,673 CRITICAL Transform executor raised TransformValidationExceptio
[2025-04-03 09:29:41] 2025-04-03 07:29:28,093 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-03 09:29:41] 2025-04-03 07:29:28,094 | INFO     | pilot state: failed 
[2025-04-03 09:29:41] 2025-04-03 07:29:28,094 | INFO     | transexitcode: 65
[2025-04-03 09:29:41] 2025-04-03 07:29:28,094 | INFO     | exeerrorcode: 65
[2025-04-03 09:29:41] 2025-04-03 07:29:28,095 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-04-03 09:29:41] 2025-04-03 07:29:28,095 | INFO     | exitcode: 65
[2025-04-03 09:29:41] 2025-04-03 07:29:28,095 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-04-03 09:29:41] 2025-04-03 07:29:28,096 | INFO     | cpuconsumptiontime: 268 s
[2025-04-03 09:29:41] 2025-04-03 07:29:28,096 | INFO     | nevents: 0
[2025-04-03 09:29:41] 2025-04-03 07:29:28,096 | INFO     | neventsw: 0
[2025-04-03 09:29:41] 2025-04-03 07:29:28,097 | INFO     | pid: 3272
[2025-04-03 09:29:41] 2025-04-03 07:29:28,097 | INFO     | pgrp: 3272
[2025-04-03 09:29:41] 2025-04-03 07:29:28,097 | INFO     | corecount: 12
[2025-04-03 09:29:41] 2025-04-03 07:29:28,098 | INFO     | event service: False
[2025-04-03 09:29:41] 2025-04-03 07:29:28,098 | INFO     | sizes: {0: 2417010, 1: 2417209, 12: 2417209, 17: 2417443, 23: 2417471, 323: 2441018, 324: 2445312, 458: 2445426}
[2025-04-03 09:29:41] 2025-04-03 07:29:28,098 | INFO     | --------------------------------------------------
[2025-04-03 09:29:41] 2025-04-03 07:29:28,099 | INFO     | 
[2025-04-03 09:29:41] 2025-04-03 07:29:28,099 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-04-03 09:29:41] 2025-04-03 07:29:28,178 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,179 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,180 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,180 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,180 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,181 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,181 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,182 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,182 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,183 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,183 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,183 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,184 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,184 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,184 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,185 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,185 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,186 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-03 09:29:41] 2025-04-03 07:29:28,186 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,186 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-03 09:29:41] 2025-04-03 07:29:28,187 | INFO     | job 6584895396 has completed (purged errors)
[2025-04-03 09:29:41] 2025-04-03 07:29:28,187 | INFO     | overall cleanup function is called
[2025-04-03 09:29:41] 2025-04-03 07:29:29,196 | INFO     | --- collectZombieJob: --- 10, [3272]
[2025-04-03 09:29:41] 2025-04-03 07:29:29,197 | INFO     | zombie collector waiting for pid 3272
[2025-04-03 09:29:41] 2025-04-03 07:29:29,198 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-03 09:29:41] 2025-04-03 07:29:29,198 | INFO     | collected zombie processes
[2025-04-03 09:29:41] 2025-04-03 07:29:29,199 | INFO     | will attempt to kill all subprocesses of pid=3272
[2025-04-03 09:29:41] 2025-04-03 07:29:29,361 | INFO     | process IDs to be killed: [3272] (in reverse order)
[2025-04-03 09:29:41] 2025-04-03 07:29:29,507 | WARNING  | found no corresponding commands to process id(s)
[2025-04-03 09:29:41] 2025-04-03 07:29:29,509 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-03 09:29:41] 2025-04-03 07:29:29,516 | INFO     | did not find any defunct processes belonging to 3272
[2025-04-03 09:29:41] 2025-04-03 07:29:29,522 | INFO     | did not find any defunct processes belonging to 3272
[2025-04-03 09:29:41] 2025-04-03 07:29:29,523 | INFO     | ready for new job
[2025-04-03 09:29:41] 2025-04-03 07:29:29,524 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-03 09:29:41] 2025-04-03 07:29:29,528 | INFO     | ***************************************
[2025-04-03 09:29:41] 2025-04-03 07:29:29,528 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-03 09:29:41] 2025-04-03 07:29:29,529 | INFO     | ***************************************
[2025-04-03 09:29:41] 2025-04-03 07:29:29,529 | INFO     | 
[2025-04-03 09:29:41] 2025-04-03 07:29:29,531 | INFO     | pilot is running in a VM
[2025-04-03 09:29:41] 2025-04-03 07:29:29,531 | INFO     | architecture information:
[2025-04-03 09:29:41] 2025-04-03 07:29:29,533 | INFO     | executing command: cat /etc/os-release
[2025-04-03 09:29:41] 2025-04-03 07:29:29,592 | INFO     | cat /etc/os-release:
[2025-04-03 09:29:41] NAME="CentOS Linux"
[2025-04-03 09:29:41] VERSION="7 (Core)"
[2025-04-03 09:29:41] ID="centos"
[2025-04-03 09:29:41] ID_LIKE="rhel fedora"
[2025-04-03 09:29:41] VERSION_ID="7"
[2025-04-03 09:29:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-03 09:29:41] ANSI_COLOR="0;31"
[2025-04-03 09:29:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-03 09:29:41] HOME_URL="https://www.centos.org/"
[2025-04-03 09:29:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-03 09:29:41] 
[2025-04-03 09:29:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-03 09:29:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-03 09:29:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-03 09:29:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-03 09:29:41] 
[2025-04-03 09:29:41] 2025-04-03 07:29:29,594 | INFO     | ***************************************
[2025-04-03 09:29:41] 2025-04-03 07:29:30,098 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-04-03 09:29:41] 2025-04-03 07:29:30,162 | INFO     | sufficient remaining disk space (259544580096 B)
[2025-04-03 09:29:41] 2025-04-03 07:29:30,164 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-03 09:29:41] 2025-04-03 07:29:30,164 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-03 09:29:41] 2025-04-03 07:29:30,166 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-03 09:29:41] 2025-04-03 07:29:30,167 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-03 09:29:41] 2025-04-03 07:29:30,168 | INFO     | aborting loop
[2025-04-03 09:29:41] 2025-04-03 07:29:30,169 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-03 09:29:41] 2025-04-03 07:29:30,170 | INFO     | found 0 job(s) in 20 queues
[2025-04-03 09:29:41] 2025-04-03 07:29:30,171 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-03 09:29:41] 2025-04-03 07:29:30,171 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-03 09:29:41] 2025-04-03 07:29:30,703 | INFO     | all job control threads have been joined
[2025-04-03 09:29:41] 2025-04-03 07:29:30,834 | INFO     | all payload control threads have been joined
[2025-04-03 09:29:41] 2025-04-03 07:29:30,902 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-03 09:29:41] 2025-04-03 07:29:31,171 | INFO     | [job] retrieve thread has finished
[2025-04-03 09:29:41] 2025-04-03 07:29:31,175 | INFO     | [job] job monitor thread has finished
[2025-04-03 09:29:41] 2025-04-03 07:29:31,222 | INFO     | all data control threads have been joined
[2025-04-03 09:29:41] 2025-04-03 07:29:31,360 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-03 09:29:41] 2025-04-03 07:29:31,485 | INFO     | [job] create_data_payload thread has finished
[2025-04-03 09:29:41] 2025-04-03 07:29:31,709 | INFO     | [job] control thread has finished
[2025-04-03 09:29:41] 2025-04-03 07:29:31,841 | INFO     | [payload] control thread has finished
[2025-04-03 09:29:41] 2025-04-03 07:29:31,939 | INFO     | [payload] failed_post thread has finished
[2025-04-03 09:29:41] 2025-04-03 07:29:31,974 | INFO     | [payload] validate_pre thread has finished
[2025-04-03 09:29:41] 2025-04-03 07:29:32,095 | INFO     | [payload] execute_payloads thread has finished
[2025-04-03 09:29:41] 2025-04-03 07:29:32,173 | INFO     | [data] copytool_out thread has finished
[2025-04-03 09:29:41] 2025-04-03 07:29:32,229 | INFO     | [job] validate thread has finished
[2025-04-03 09:29:41] 2025-04-03 07:29:32,231 | INFO     | [data] control thread has finished
[2025-04-03 09:29:41] 2025-04-03 07:29:32,368 | INFO     | [data] copytool_in thread has finished
[2025-04-03 09:29:41] 2025-04-03 07:29:32,465 | INFO     | [payload] validate_post thread has finished
[2025-04-03 09:29:41] 2025-04-03 07:29:33,102 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-03 09:29:41] 2025-04-03 07:29:34,109 | INFO     | [job] queue monitor thread has finished
[2025-04-03 09:29:41] 2025-04-03 07:29:34,910 | INFO     | [data] queue_monitor thread has finished
[2025-04-03 09:29:41] 2025-04-03 07:29:36,067 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139727228729152)>', '<ExcThread(monitor, started 139726786897664)>']
[2025-04-03 09:29:41] 2025-04-03 07:29:36,203 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-03 09:29:41] 2025-04-03 07:29:36,204 | INFO     | [monitor] control thread has ended
[2025-04-03 09:29:41] 2025-04-03 07:29:41,073 | INFO     | all workflow threads have been joined
[2025-04-03 09:29:41] 2025-04-03 07:29:41,074 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-03 09:29:41] 2025-04-03 07:29:41,075 | INFO     | traces error code: 0
[2025-04-03 09:29:41] 2025-04-03 07:29:41,076 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-03 09:29:41] 2025-04-03 07:29:41,340 [wrapper] ==== pilot stdout END ====
[2025-04-03 09:29:41] 2025-04-03 07:29:41,351 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-03 09:29:41] 2025-04-03 07:29:41,362 [wrapper] pilotpid: 29168
[2025-04-03 09:29:41] 2025-04-03 07:29:41,374 [wrapper] Pilot exit status: 0
[2025-04-03 09:29:41] 2025-04-03 07:29:41,424 [wrapper] pandaids: 6584895396
[2025-04-03 09:29:41] 2025-04-03 07:29:41,526 [wrapper] cleanup supervisor_pilot 29174 29169
[2025-04-03 09:29:41] 2025-04-03 07:29:41,538 [wrapper] Test setup, not cleaning
[2025-04-03 09:29:41] 2025-04-03 07:29:41,551 [wrapper] apfmon messages muted
[2025-04-03 09:29:41] 2025-04-03 07:29:41,563 [wrapper] ==== wrapper stdout END ====
[2025-04-03 09:29:41] 2025-04-03 07:29:41,575 [wrapper] ==== wrapper stderr END ====
[2025-04-03 09:29:41]  *** Error codes and diagnostics ***
[2025-04-03 09:29:41]     "exeErrorCode": 65,
[2025-04-03 09:29:41]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-04-03 09:29:41]     "pilotErrorCode": 1305,
[2025-04-03 09:29:41]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-04-03 09:29:41]  *** Listing of results directory ***
[2025-04-03 09:29:41] total 222080
[2025-04-03 09:29:41] -rw-r--r--. 1 boinc boinc    494584 Apr  2 22:30 pilot3.tar.gz
[2025-04-03 09:29:41] -rw-r--r--. 1 boinc boinc      5112 Apr  2 22:52 queuedata.json
[2025-04-03 09:29:41] -rwx------. 1 boinc boinc     37140 Apr  2 22:53 runpilot2-wrapper.sh
[2025-04-03 09:29:41] -rw-r--r--. 1 boinc boinc       100 Apr  3 09:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-03 09:29:41] -rwxr-xr-x. 1 boinc boinc      7986 Apr  3 09:20 run_atlas
[2025-04-03 09:29:41] -rw-r--r--. 1 boinc boinc       105 Apr  3 09:20 job.xml
[2025-04-03 09:29:41] -rw-r--r--. 2 boinc boinc 223193342 Apr  3 09:20 EVNT.44004365._000161.pool.root.1
[2025-04-03 09:29:41] -rw-r--r--. 1 boinc boinc      6072 Apr  3 09:20 init_data.xml
[2025-04-03 09:29:41] -rw-r--r--. 2 boinc boinc    507238 Apr  3 09:20 input.tar.gz
[2025-04-03 09:29:41] -rw-r--r--. 2 boinc boinc     17571 Apr  3 09:20 start_atlas.sh
[2025-04-03 09:29:41] drwxrwx--x. 2 boinc boinc        68 Apr  3 09:20 shared
[2025-04-03 09:29:41] -rw-r--r--. 1 boinc boinc         0 Apr  3 09:20 boinc_lockfile
[2025-04-03 09:29:41] -rw-r--r--. 1 boinc boinc      2547 Apr  3 09:20 pandaJob.out
[2025-04-03 09:29:41] -rw-------. 1 boinc boinc       424 Apr  3 09:20 setup.sh.local
[2025-04-03 09:29:41] -rw-------. 1 boinc boinc    990847 Apr  3 09:21 agis_schedconf.cvmfs.json
[2025-04-03 09:29:41] -rw-------. 1 boinc boinc   1603449 Apr  3 09:21 agis_ddmendpoints.agis.ALL.json
[2025-04-03 09:29:41] drwx------. 4 boinc boinc      4096 Apr  3 09:21 pilot3
[2025-04-03 09:29:41] -rw-r--r--. 1 boinc boinc       526 Apr  3 09:25 boinc_task_state.xml
[2025-04-03 09:29:41] -rw-------. 1 boinc boinc     48104 Apr  3 09:27 log.44004367._004007.job.log.tgz.1
[2025-04-03 09:29:41] -rw-r--r--. 1 boinc boinc      8192 Apr  3 09:29 boinc_mmap_file
[2025-04-03 09:29:41] -rw-r--r--. 1 boinc boinc        24 Apr  3 09:29 wrapper_checkpoint.txt
[2025-04-03 09:29:41] -rw-------. 1 boinc boinc        95 Apr  3 09:29 pilot_heartbeat.json
[2025-04-03 09:29:41] -rw-------. 1 boinc boinc      8022 Apr  3 09:29 heartbeat.json
[2025-04-03 09:29:41] -rw-------. 1 boinc boinc      4405 Apr  3 09:29 pilotlog.txt
[2025-04-03 09:29:41] -rw-------. 1 boinc boinc    151867 Apr  3 09:29 log.44004367._004007.job.log.1
[2025-04-03 09:29:41] -rw-------. 1 boinc boinc       188 Apr  3 09:29 output.list
[2025-04-03 09:29:41] -rw-r--r--. 1 boinc boinc       620 Apr  3 09:29 runtime_log
[2025-04-03 09:29:41] -rw-------. 1 boinc boinc    215040 Apr  3 09:29 result.tar.gz
[2025-04-03 09:29:41] -rw-------. 1 boinc boinc       643 Apr  3 09:29 ZtIKDmVGKK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmE2FLDmoolBLm.diag
[2025-04-03 09:29:41] -rw-r--r--. 1 boinc boinc     10862 Apr  3 09:29 runtime_log.err
[2025-04-03 09:29:41] -rw-r--r--. 1 boinc boinc     21527 Apr  3 09:29 stderr.txt
[2025-04-03 09:29:41] No HITS result produced
[2025-04-03 09:29:41]  *** Contents of shared directory: ***
[2025-04-03 09:29:41] total 218692
[2025-04-03 09:29:41] -rw-r--r--. 2 boinc boinc 223193342 Apr  3 09:20 ATLAS.root_0
[2025-04-03 09:29:41] -rw-r--r--. 2 boinc boinc    507238 Apr  3 09:20 input.tar.gz
[2025-04-03 09:29:41] -rw-r--r--. 2 boinc boinc     17571 Apr  3 09:20 start_atlas.sh
[2025-04-03 09:29:41] -rw-------. 1 boinc boinc    215040 Apr  3 09:29 result.tar.gz
09:29:43 (25493): run_atlas exited; CPU time 202.658689
09:29:43 (25493): called boinc_finish(0)

</stderr_txt>
]]>

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