Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:44:58 (1273404): wrapper (7.7.26015): starting
01:44:58 (1273404): wrapper: running run_atlas (--nthreads 8)
[2025-04-03 01:44:58] Arguments: --nthreads 8
[2025-04-03 01:44:58] Threads: 8
[2025-04-03 01:44:58] Checking for CVMFS
[2025-04-03 01:44:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 01:44:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 01:44:59] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 01:45:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 01:45:00] 2.12.6.0 2303914 10178 317704 144433 2 375 22279560 32935936 25394 130560 0 5090993 99.579 4995014 18491 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-03 01:45:00] CVMFS is ok
[2025-04-03 01:45:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-03 01:45:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-03 01:45:00] Further information can be found at the LHC@home message board.
[2025-04-03 01:45:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 01:45:00] Checking for apptainer binary...
[2025-04-03 01:45:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 01:45:00] Running /usr/bin/apptainer --version
[2025-04-03 01:45:00] apptainer version 1.4.0-1.el9
[2025-04-03 01:45:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 01:45:00] c6-2-11-1.aglt2.org
[2025-04-03 01:45:00] apptainer works
[2025-04-03 01:45:01] Set ATHENA_PROC_NUMBER=8
[2025-04-03 01:45:01] Set ATHENA_CORE_NUMBER=8
[2025-04-03 01:45:01] Starting ATLAS job with PandaID=6584895255
[2025-04-03 01:45:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-03 03:57:01]  *** The last 200 lines of the pilot log: ***
[2025-04-03 03:57:01] 2025-04-03 07:56:46,176 | INFO     | mean x: 1743663414.059829
[2025-04-03 03:57:01] 2025-04-03 07:56:46,176 | INFO     | mean y: 2176082.683760684
[2025-04-03 03:57:01] 2025-04-03 07:56:46,176 | INFO     | -- intersect: -21076965247.904434
[2025-04-03 03:57:01] 2025-04-03 07:56:46,177 | INFO     | intersect: -21076965247.904434
[2025-04-03 03:57:01] 2025-04-03 07:56:46,177 | INFO     | chi2: 1.385006533827909
[2025-04-03 03:57:01] 2025-04-03 07:56:46,177 | INFO     | current chi2=1.385006533827909 (change=44.332993262537585 %)
[2025-04-03 03:57:01] 2025-04-03 07:56:46,177 | INFO     | model: linear, x: [1743660181.0, 1743660242.0, 1743660303.0, 1743660365.0, 1743660425.0, 1743660486.0, 1743660547.0, 1743660609.0, 1743660670.0, 1743660730.0, 1743
[2025-04-03 03:57:01] 2025-04-03 07:56:46,177 | INFO     | sum of square deviations: 435585207.5625
[2025-04-03 03:57:01] 2025-04-03 07:56:46,178 | INFO     | sum of deviations: -9518043371.125
[2025-04-03 03:57:01] 2025-04-03 07:56:46,178 | INFO     | mean x: 1743663566.5625
[2025-04-03 03:57:01] 2025-04-03 07:56:46,178 | INFO     | mean y: 2214818.0178571427
[2025-04-03 03:57:01] 2025-04-03 07:56:46,178 | INFO     | -- intersect: 38103291629.28919
[2025-04-03 03:57:01] 2025-04-03 07:56:46,179 | INFO     | intersect: 38103291629.28919
[2025-04-03 03:57:01] 2025-04-03 07:56:46,179 | INFO     | chi2: 0.4378295094917949
[2025-04-03 03:57:01] 2025-04-03 07:56:46,179 | INFO     | current chi2=0.4378295094917949 (change=68.38791017962112 %)
[2025-04-03 03:57:01] 2025-04-03 07:56:46,179 | INFO     | model: linear, x: [1743660486.0, 1743660547.0, 1743660609.0, 1743660670.0, 1743660730.0, 1743660792.0, 1743660852.0, 1743660913.0, 1743660974.0, 1743661035.0, 1743
[2025-04-03 03:57:01] 2025-04-03 07:56:46,179 | INFO     | sum of square deviations: 379811991.6635508
[2025-04-03 03:57:01] 2025-04-03 07:56:46,180 | INFO     | sum of deviations: -14137565176.102798
[2025-04-03 03:57:01] 2025-04-03 07:56:46,180 | INFO     | mean x: 1743663719.0560749
[2025-04-03 03:57:01] 2025-04-03 07:56:46,180 | INFO     | mean y: 2227341.85046729
[2025-04-03 03:57:01] 2025-04-03 07:56:46,180 | INFO     | -- intersect: 64905811258.17351
[2025-04-03 03:57:01] 2025-04-03 07:56:46,180 | INFO     | intersect: 64905811258.17351
[2025-04-03 03:57:01] 2025-04-03 07:56:46,181 | INFO     | chi2: 0.28127914418299693
[2025-04-03 03:57:01] 2025-04-03 07:56:46,181 | INFO     | current chi2=0.28127914418299693 (change=35.7560104823706 %)
[2025-04-03 03:57:01] 2025-04-03 07:56:46,181 | INFO     | model: linear, x: [1743660792.0, 1743660852.0, 1743660913.0, 1743660974.0, 1743661035.0, 1743661096.0, 1743661157.0, 1743661218.0, 1743661279.0, 1743661340.0, 1743
[2025-04-03 03:57:01] 2025-04-03 07:56:46,181 | INFO     | sum of square deviations: 329022139.3431378
[2025-04-03 03:57:01] 2025-04-03 07:56:46,182 | INFO     | sum of deviations: -15483696915.519613
[2025-04-03 03:57:01] 2025-04-03 07:56:46,182 | INFO     | mean x: 1743663871.5392158
[2025-04-03 03:57:01] 2025-04-03 07:56:46,182 | INFO     | mean y: 2231148.754901961
[2025-04-03 03:57:01] 2025-04-03 07:56:46,182 | INFO     | -- intersect: 82058602684.58672
[2025-04-03 03:57:01] 2025-04-03 07:56:46,182 | INFO     | intersect: 82058602684.58672
[2025-04-03 03:57:01] 2025-04-03 07:56:46,182 | INFO     | chi2: 0.2049687476884955
[2025-04-03 03:57:01] 2025-04-03 07:56:46,182 | INFO     | current chi2=0.2049687476884955 (change=27.12977413101584 %)
[2025-04-03 03:57:01] 2025-04-03 07:56:46,182 | INFO     | model: linear, x: [1743661096.0, 1743661157.0, 1743661218.0, 1743661279.0, 1743661340.0, 1743661401.0, 1743661462.0, 1743661524.0, 1743661584.0, 1743661645.0, 1743
[2025-04-03 03:57:01] 2025-04-03 07:56:46,183 | INFO     | sum of square deviations: 282970706.90721655
[2025-04-03 03:57:01] 2025-04-03 07:56:46,169 | INFO     | monitor loop #570: job 0:6584895255 is in state 'finished'
[2025-04-03 03:57:01] 2025-04-03 07:56:46,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-03 03:57:01] 2025-04-03 07:56:46,183 | INFO     | sum of deviations: -12210196408.907223
[2025-04-03 03:57:01] 2025-04-03 07:56:46,184 | INFO     | mean x: 1743664024.030928
[2025-04-03 03:57:01] 2025-04-03 07:56:46,184 | INFO     | mean y: 2220278.969072165
[2025-04-03 03:57:01] 2025-04-03 07:56:46,184 | INFO     | -- intersect: 75241387036.7639
[2025-04-03 03:57:01] 2025-04-03 07:56:46,184 | INFO     | intersect: 75241387036.7639
[2025-04-03 03:57:01] 2025-04-03 07:56:46,184 | INFO     | chi2: 0.19879588888153168
[2025-04-03 03:57:01] 2025-04-03 07:56:46,184 | INFO     | current chi2=0.19879588888153168 (change=3.01160975835453 %)
[2025-04-03 03:57:01] 2025-04-03 07:56:46,185 | INFO     | left removable region: 60
[2025-04-03 03:57:01] 2025-04-03 07:56:46,185 | INFO     | model: linear, x: [1743662926.0, 1743662987.0, 1743663048.0, 1743663109.0, 1743663170.0, 1743663231.0, 1743663292.0, 1743663353.0, 1743663414.0, 1743663475.0, 1743
[2025-04-03 03:57:01] 2025-04-03 07:56:46,185 | INFO     | sum of square deviations: 70364110.0
[2025-04-03 03:57:01] 2025-04-03 07:56:46,185 | INFO     | sum of deviations: 450152123.0
[2025-04-03 03:57:01] 2025-04-03 07:56:46,185 | INFO     | mean x: 1743664756.0
[2025-04-03 03:57:01] 2025-04-03 07:56:46,185 | INFO     | mean y: 2185120.655737705
[2025-04-03 03:57:01] 2025-04-03 07:56:46,186 | INFO     | -- intersect: -11152853885.929821
[2025-04-03 03:57:01] 2025-04-03 07:56:46,186 | INFO     | intersect: -11152853885.929821
[2025-04-03 03:57:01] 2025-04-03 07:56:46,186 | INFO     | chi2: 0.010192295800127978
[2025-04-03 03:57:01] 2025-04-03 07:56:46,186 | INFO     | -- intersect: -11152853885.929821
[2025-04-03 03:57:01] 2025-04-03 07:56:46,186 | INFO     | current memory leak: 6.40 B/s (using 61 data points, chi2=0.01)
[2025-04-03 03:57:01] 2025-04-03 07:56:46,187 | INFO     | ..............................
[2025-04-03 03:57:01] 2025-04-03 07:56:46,187 | INFO     | . Timing measurements:
[2025-04-03 03:57:01] 2025-04-03 07:56:46,187 | INFO     | . get job = 0 s
[2025-04-03 03:57:01] 2025-04-03 07:56:46,187 | INFO     | . initial setup = 7 s
[2025-04-03 03:57:01] 2025-04-03 07:56:46,187 | INFO     | . payload setup = 32 s
[2025-04-03 03:57:01] 2025-04-03 07:56:46,187 | INFO     | . stage-in = 0 s
[2025-04-03 03:57:01] 2025-04-03 07:56:46,187 | INFO     | . payload execution = 7750 s
[2025-04-03 03:57:01] 2025-04-03 07:56:46,188 | INFO     | . stage-out = 1 s
[2025-04-03 03:57:01] 2025-04-03 07:56:46,188 | INFO     | . log creation = 0 s
[2025-04-03 03:57:01] 2025-04-03 07:56:46,188 | INFO     | ..............................
[2025-04-03 03:57:01] 2025-04-03 07:56:46,299 | INFO     | 
[2025-04-03 03:57:01] 2025-04-03 07:56:46,300 | INFO     | job summary report
[2025-04-03 03:57:01] 2025-04-03 07:56:46,300 | INFO     | --------------------------------------------------
[2025-04-03 03:57:01] 2025-04-03 07:56:46,300 | INFO     | PanDA job id: 6584895255
[2025-04-03 03:57:01] 2025-04-03 07:56:46,300 | INFO     | task id: 44004367
[2025-04-03 03:57:01] 2025-04-03 07:56:46,300 | INFO     | errors: (none)
[2025-04-03 03:57:01] 2025-04-03 07:56:46,300 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-03 03:57:01] 2025-04-03 07:56:46,300 | INFO     | pilot state: finished 
[2025-04-03 03:57:01] 2025-04-03 07:56:46,301 | INFO     | transexitcode: 0
[2025-04-03 03:57:01] 2025-04-03 07:56:46,301 | INFO     | exeerrorcode: 0
[2025-04-03 03:57:01] 2025-04-03 07:56:46,301 | INFO     | exeerrordiag: 
[2025-04-03 03:57:01] 2025-04-03 07:56:46,301 | INFO     | exitcode: 0
[2025-04-03 03:57:01] 2025-04-03 07:56:46,301 | INFO     | exitmsg: OK
[2025-04-03 03:57:01] 2025-04-03 07:56:46,301 | INFO     | cpuconsumptiontime: 44418 s
[2025-04-03 03:57:01] 2025-04-03 07:56:46,301 | INFO     | nevents: 400
[2025-04-03 03:57:01] 2025-04-03 07:56:46,301 | INFO     | neventsw: 0
[2025-04-03 03:57:01] 2025-04-03 07:56:46,301 | INFO     | pid: 1309877
[2025-04-03 03:57:01] 2025-04-03 07:56:46,301 | INFO     | pgrp: 1309877
[2025-04-03 03:57:01] 2025-04-03 07:56:46,301 | INFO     | corecount: 8
[2025-04-03 03:57:01] 2025-04-03 07:56:46,301 | INFO     | event service: False
[2025-04-03 03:57:01] 2025-04-03 07:56:46,302 | INFO     | sizes: {0: 2417060, 1: 2417259, 2: 2417259, 13: 2417287, 24: 2417343, 26: 2417577, 35: 2417733, 7786: 2445074, 7787: 2445073, 7789: 2454070, 7790: 2454126, 7797: 2
[2025-04-03 03:57:01] 2025-04-03 07:56:46,302 | INFO     | --------------------------------------------------
[2025-04-03 03:57:01] 2025-04-03 07:56:46,302 | INFO     | 
[2025-04-03 03:57:01] 2025-04-03 07:56:46,302 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-04-03 03:57:01] 2025-04-03 07:56:46,330 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,330 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,330 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,330 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,331 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,331 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,331 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,331 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,331 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,331 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,331 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,331 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,331 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,332 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,332 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,332 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,332 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,332 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-03 03:57:01] 2025-04-03 07:56:46,332 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,332 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-03 03:57:01] 2025-04-03 07:56:46,332 | INFO     | job 6584895255 has completed (purged errors)
[2025-04-03 03:57:01] 2025-04-03 07:56:46,333 | INFO     | overall cleanup function is called
[2025-04-03 03:57:01] 2025-04-03 07:56:47,345 | INFO     | --- collectZombieJob: --- 10, [1309877]
[2025-04-03 03:57:01] 2025-04-03 07:56:47,345 | INFO     | zombie collector waiting for pid 1309877
[2025-04-03 03:57:01] 2025-04-03 07:56:47,346 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-03 03:57:01] 2025-04-03 07:56:47,346 | INFO     | collected zombie processes
[2025-04-03 03:57:01] 2025-04-03 07:56:47,346 | INFO     | will attempt to kill all subprocesses of pid=1309877
[2025-04-03 03:57:01] 2025-04-03 07:56:47,609 | INFO     | process IDs to be killed: [1309877] (in reverse order)
[2025-04-03 03:57:01] 2025-04-03 07:56:47,784 | WARNING  | found no corresponding commands to process id(s)
[2025-04-03 03:57:01] 2025-04-03 07:56:47,784 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-03 03:57:01] 2025-04-03 07:56:47,827 | INFO     | did not find any defunct processes belonging to 1309877
[2025-04-03 03:57:01] 2025-04-03 07:56:47,865 | INFO     | did not find any defunct processes belonging to 1309877
[2025-04-03 03:57:01] 2025-04-03 07:56:47,865 | INFO     | ready for new job
[2025-04-03 03:57:01] 2025-04-03 07:56:47,865 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-03 03:57:01] 2025-04-03 07:56:47,867 | INFO     | ***************************************
[2025-04-03 03:57:01] 2025-04-03 07:56:47,867 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-03 03:57:01] 2025-04-03 07:56:47,867 | INFO     | ***************************************
[2025-04-03 03:57:01] 2025-04-03 07:56:47,867 | INFO     | 
[2025-04-03 03:57:01] 2025-04-03 07:56:47,892 | INFO     | architecture information:
[2025-04-03 03:57:01] 2025-04-03 07:56:47,900 | INFO     | executing command: cat /etc/os-release
[2025-04-03 03:57:01] 2025-04-03 07:56:47,935 | INFO     | cat /etc/os-release:
[2025-04-03 03:57:01] NAME="CentOS Linux"
[2025-04-03 03:57:01] VERSION="7 (Core)"
[2025-04-03 03:57:01] ID="centos"
[2025-04-03 03:57:01] ID_LIKE="rhel fedora"
[2025-04-03 03:57:01] VERSION_ID="7"
[2025-04-03 03:57:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-03 03:57:01] ANSI_COLOR="0;31"
[2025-04-03 03:57:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-03 03:57:01] HOME_URL="https://www.centos.org/"
[2025-04-03 03:57:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-03 03:57:01] 
[2025-04-03 03:57:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-03 03:57:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-03 03:57:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-03 03:57:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-03 03:57:01] 
[2025-04-03 03:57:01] 2025-04-03 07:56:47,935 | INFO     | ***************************************
[2025-04-03 03:57:01] 2025-04-03 07:56:48,021 | INFO     | PID=1286103 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-03 03:57:01] 2025-04-03 07:56:48,021 | INFO     | .. there are 23 such processes running
[2025-04-03 03:57:01] 2025-04-03 07:56:48,437 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-04-03 03:57:01] 2025-04-03 07:56:48,453 | INFO     | sufficient remaining disk space (93156540416 B)
[2025-04-03 03:57:01] 2025-04-03 07:56:48,454 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-03 03:57:01] 2025-04-03 07:56:48,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-03 03:57:01] 2025-04-03 07:56:48,454 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-03 03:57:01] 2025-04-03 07:56:48,454 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-03 03:57:01] 2025-04-03 07:56:48,455 | INFO     | found 0 job(s) in 20 queues
[2025-04-03 03:57:01] 2025-04-03 07:56:48,455 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-03 03:57:01] 2025-04-03 07:56:48,455 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-03 03:57:01] 2025-04-03 07:56:48,512 | INFO     | all data control threads have been joined
[2025-04-03 03:57:01] 2025-04-03 07:56:48,688 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-03 03:57:01] 2025-04-03 07:56:48,688 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-03 03:57:01] 2025-04-03 07:56:48,688 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-03 03:57:01] 2025-04-03 07:56:48,689 | INFO     | will abort loop
[2025-04-03 03:57:01] 2025-04-03 07:56:49,459 | INFO     | [job] retrieve thread has finished
[2025-04-03 03:57:01] 2025-04-03 07:56:49,518 | INFO     | [data] control thread has finished
[2025-04-03 03:57:01] 2025-04-03 07:56:49,553 | INFO     | [payload] validate_post thread has finished
[2025-04-03 03:57:01] 2025-04-03 07:56:49,669 | INFO     | all job control threads have been joined
[2025-04-03 03:57:01] 2025-04-03 07:56:49,669 | INFO     | all payload control threads have been joined
[2025-04-03 03:57:01] 2025-04-03 07:56:49,681 | INFO     | [payload] validate_pre thread has finished
[2025-04-03 03:57:01] 2025-04-03 07:56:49,693 | INFO     | [job] job monitor thread has finished
[2025-04-03 03:57:01] 2025-04-03 07:56:49,738 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-03 03:57:01] 2025-04-03 07:56:49,772 | INFO     | [job] validate thread has finished
[2025-04-03 03:57:01] 2025-04-03 07:56:49,777 | INFO     | [job] create_data_payload thread has finished
[2025-04-03 03:57:01] 2025-04-03 07:56:49,778 | INFO     | [payload] execute_payloads thread has finished
[2025-04-03 03:57:01] 2025-04-03 07:56:49,900 | INFO     | [payload] failed_post thread has finished
[2025-04-03 03:57:01] 2025-04-03 07:56:50,251 | INFO     | [data] copytool_in thread has finished
[2025-04-03 03:57:01] 2025-04-03 07:56:50,461 | INFO     | [data] copytool_out thread has finished
[2025-04-03 03:57:01] 2025-04-03 07:56:50,483 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-03 03:57:01] 2025-04-03 07:56:50,675 | INFO     | [job] control thread has finished
[2025-04-03 03:57:01] 2025-04-03 07:56:50,676 | INFO     | [payload] control thread has finished
[2025-04-03 03:57:01] 2025-04-03 07:56:51,323 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-03 03:57:01] 2025-04-03 07:56:52,329 | INFO     | [job] queue monitor thread has finished
[2025-04-03 03:57:01] 2025-04-03 07:56:53,747 | INFO     | [data] queue_monitor thread has finished
[2025-04-03 03:57:01] 2025-04-03 07:56:55,775 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140176062228288)>', '<ExcThread(monitor, started 140175585834752)>']
[2025-04-03 03:57:01] 2025-04-03 07:56:56,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-03 03:57:01] 2025-04-03 07:56:56,500 | INFO     | [monitor] control thread has ended
[2025-04-03 03:57:01] 2025-04-03 07:57:00,801 | INFO     | all workflow threads have been joined
[2025-04-03 03:57:01] 2025-04-03 07:57:00,801 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-03 03:57:01] 2025-04-03 07:57:00,802 | INFO     | traces error code: 0
[2025-04-03 03:57:01] 2025-04-03 07:57:00,802 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-03 03:57:01] 2025-04-03 07:57:00,991 [wrapper] ==== pilot stdout END ====
[2025-04-03 03:57:01] 2025-04-03 07:57:00,994 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-03 03:57:01] 2025-04-03 07:57:00,997 [wrapper] pilotpid: 1286103
[2025-04-03 03:57:01] 2025-04-03 07:57:01,000 [wrapper] Pilot exit status: 0
[2025-04-03 03:57:01] 2025-04-03 07:57:01,051 [wrapper] pandaids: 6584895255
[2025-04-03 03:57:01] 2025-04-03 07:57:01,177 [wrapper] cleanup supervisor_pilot 2421422 1286105
[2025-04-03 03:57:01] 2025-04-03 07:57:01,180 [wrapper] Test setup, not cleaning
[2025-04-03 03:57:01] 2025-04-03 07:57:01,183 [wrapper] apfmon messages muted
[2025-04-03 03:57:01] 2025-04-03 07:57:01,186 [wrapper] ==== wrapper stdout END ====
[2025-04-03 03:57:01] 2025-04-03 07:57:01,188 [wrapper] ==== wrapper stderr END ====
[2025-04-03 03:57:01]  *** Error codes and diagnostics ***
[2025-04-03 03:57:01]     "exeErrorCode": 0,
[2025-04-03 03:57:01]     "exeErrorDiag": "",
[2025-04-03 03:57:01]     "pilotErrorCode": 0,
[2025-04-03 03:57:01]     "pilotErrorDiag": "",
[2025-04-03 03:57:01]  *** Listing of results directory ***
[2025-04-03 03:57:01] total 414404
[2025-04-03 03:57:01] -rw-r--r--. 1 boincer umatlas    494584 Apr  2 16:15 pilot3.tar.gz
[2025-04-03 03:57:01] -rw-r--r--. 1 boincer umatlas      5112 Apr  2 16:24 queuedata.json
[2025-04-03 03:57:01] -rwx------. 1 boincer umatlas     37140 Apr  2 16:26 runpilot2-wrapper.sh
[2025-04-03 03:57:01] -rw-r--r--. 1 boincer umatlas       100 Apr  3 01:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-03 03:57:01] -rwxr-xr-x. 1 boincer umatlas      7986 Apr  3 01:44 run_atlas
[2025-04-03 03:57:01] -rw-r--r--. 1 boincer umatlas       105 Apr  3 01:44 job.xml
[2025-04-03 03:57:01] -rw-r--r--. 2 boincer umatlas 221456938 Apr  3 01:44 EVNT.44004365._000155.pool.root.1
[2025-04-03 03:57:01] -rw-r--r--. 2 boincer umatlas     17571 Apr  3 01:44 start_atlas.sh
[2025-04-03 03:57:01] drwxrwx--x. 2 boincer umatlas      4096 Apr  3 01:44 shared
[2025-04-03 03:57:01] -rw-r--r--. 2 boincer umatlas    507241 Apr  3 01:44 input.tar.gz
[2025-04-03 03:57:01] -rw-r--r--. 1 boincer umatlas         0 Apr  3 01:44 boinc_lockfile
[2025-04-03 03:57:01] -rw-r--r--. 1 boincer umatlas      2547 Apr  3 01:45 pandaJob.out
[2025-04-03 03:57:01] -rw-------. 1 boincer umatlas       467 Apr  3 01:45 setup.sh.local
[2025-04-03 03:57:01] -rw-------. 1 boincer umatlas    991169 Apr  3 01:45 agis_schedconf.cvmfs.json
[2025-04-03 03:57:01] -rw-------. 1 boincer umatlas   1603449 Apr  3 01:45 agis_ddmendpoints.agis.ALL.json
[2025-04-03 03:57:01] drwx------. 4 boincer umatlas      4096 Apr  3 01:45 pilot3
[2025-04-03 03:57:01] -rw-r--r--. 1 boincer umatlas      6856 Apr  3 03:48 init_data.xml
[2025-04-03 03:57:01] -rw-------. 1 boincer umatlas 196797689 Apr  3 03:55 HITS.44004367._003866.pool.root.1
[2025-04-03 03:57:01] -rw-r--r--. 1 boincer umatlas       530 Apr  3 03:55 boinc_task_state.xml
[2025-04-03 03:57:01] -rw-------. 1 boincer umatlas      1043 Apr  3 03:56 memory_monitor_summary.json
[2025-04-03 03:57:01] -rw-------. 1 boincer umatlas    349035 Apr  3 03:56 log.44004367._003866.job.log.tgz.1
[2025-04-03 03:57:01] -rw-------. 1 boincer umatlas        95 Apr  3 03:56 pilot_heartbeat.json
[2025-04-03 03:57:01] -rw-------. 1 boincer umatlas      7723 Apr  3 03:56 heartbeat.json
[2025-04-03 03:57:01] -rw-r--r--. 1 boincer umatlas      8192 Apr  3 03:56 boinc_mmap_file
[2025-04-03 03:57:01] -rw-r--r--. 1 boincer umatlas        27 Apr  3 03:56 wrapper_checkpoint.txt
[2025-04-03 03:57:01] -rw-------. 1 boincer umatlas      4923 Apr  3 03:57 pilotlog.txt
[2025-04-03 03:57:01] -rw-------. 1 boincer umatlas    776231 Apr  3 03:57 log.44004367._003866.job.log.1
[2025-04-03 03:57:01] -rw-------. 1 boincer umatlas       357 Apr  3 03:57 output.list
[2025-04-03 03:57:01] -rw-r--r--. 1 boincer umatlas       620 Apr  3 03:57 runtime_log
[2025-04-03 03:57:01] -rw-------. 1 boincer umatlas   1146880 Apr  3 03:57 result.tar.gz
[2025-04-03 03:57:01] -rw-r--r--. 1 boincer umatlas     11424 Apr  3 03:57 runtime_log.err
[2025-04-03 03:57:01] -rw-------. 1 boincer umatlas       653 Apr  3 03:57 5rSLDmpqJK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm1NsKDmzdF3Ao.diag
[2025-04-03 03:57:01] -rw-r--r--. 1 boincer umatlas     21782 Apr  3 03:57 stderr.txt
[2025-04-03 03:57:01] HITS file was successfully produced:
[2025-04-03 03:57:01] -rw-------. 1 boincer umatlas 196797689 Apr  3 03:55 shared/HITS.pool.root.1
[2025-04-03 03:57:01]  *** Contents of shared directory: ***
[2025-04-03 03:57:01] total 410100
[2025-04-03 03:57:01] -rw-r--r--. 2 boincer umatlas 221456938 Apr  3 01:44 ATLAS.root_0
[2025-04-03 03:57:01] -rw-r--r--. 2 boincer umatlas     17571 Apr  3 01:44 start_atlas.sh
[2025-04-03 03:57:01] -rw-r--r--. 2 boincer umatlas    507241 Apr  3 01:44 input.tar.gz
[2025-04-03 03:57:01] -rw-------. 1 boincer umatlas 196797689 Apr  3 03:55 HITS.pool.root.1
[2025-04-03 03:57:01] -rw-------. 1 boincer umatlas   1146880 Apr  3 03:57 result.tar.gz
03:57:02 (1273404): run_atlas exited; CPU time 44458.097185
03:57:02 (1273404): called boinc_finish(0)

</stderr_txt>
]]>

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