Stderr output

<core_client_version>7.16.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-04 08:29:46 (3684): Detected: vboxwrapper 26206
2025-04-04 08:29:46 (3684): Detected: BOINC client v7.16.5
2025-04-04 08:29:46 (3684): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2025-04-04 08:29:47 (3684): Successfully copied 'init_data.xml' to the shared directory.
2025-04-04 08:29:47 (3684): Create VM. (boinc_9874e0a7de14579e, slot#2)
2025-04-04 08:29:48 (3684): Setting Memory Size for VM. (4400MB)
2025-04-04 08:29:48 (3684): Setting CPU Count for VM. (4)
2025-04-04 08:29:48 (3684): Setting Chipset Options for VM.
2025-04-04 08:29:48 (3684): Setting Graphics Controller Options for VM.
2025-04-04 08:29:49 (3684): Setting Boot Options for VM.
2025-04-04 08:29:49 (3684): Setting Network Configuration for NAT.
2025-04-04 08:29:49 (3684): Enabling VM Network Access.
2025-04-04 08:29:49 (3684): Disabling USB Support for VM.
2025-04-04 08:29:50 (3684): Disabling COM Port Support for VM.
2025-04-04 08:29:50 (3684): Disabling LPT Port Support for VM.
2025-04-04 08:29:50 (3684): Disabling Audio Support for VM.
2025-04-04 08:29:50 (3684): Disabling Clipboard Support for VM.
2025-04-04 08:29:51 (3684): Disabling Drag and Drop Support for VM.
2025-04-04 08:29:51 (3684): Adding storage controller(s) to VM.
2025-04-04 08:29:51 (3684): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-04 08:29:52 (3684): Adding VirtualBox Guest Additions to VM.
2025-04-04 08:29:52 (3684): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-04 08:29:52 (3684): forwarding host port 53420 to guest port 80
2025-04-04 08:29:52 (3684): Enabling remote desktop for VM.
2025-04-04 08:29:53 (3684): Enabling shared directory for VM.
2025-04-04 08:29:53 (3684): Starting VM using VBoxManage interface. (boinc_9874e0a7de14579e, slot#2)
2025-04-04 08:29:58 (3684): Successfully started VM. (PID = '1664')
2025-04-04 08:29:58 (3684): Reporting VM Process ID to BOINC.
2025-04-04 08:29:58 (3684): Guest Log: BIOS: VirtualBox 5.2.44
2025-04-04 08:29:58 (3684): Guest Log: CPUID EDX: 0x178bfbff
2025-04-04 08:29:58 (3684): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-04 08:29:58 (3684): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-04 08:29:58 (3684): Detected: Web Application Enabled (http://localhost:53420)
2025-04-04 08:29:58 (3684): Detected: Remote Desktop Enabled (localhost:53421)
2025-04-04 08:29:58 (3684): Preference change detected
2025-04-04 08:29:58 (3684): Setting CPU throttle for VM. (100%)
2025-04-04 08:29:58 (3684): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-04 08:30:00 (3684): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-04 08:30:00 (3684): Guest Log: BIOS: Booting from Hard Disk...
2025-04-04 08:30:03 (3684): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-04 08:30:03 (3684): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-04 08:30:03 (3684): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-04 08:30:08 (3684): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-04 08:30:08 (3684): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-04 08:30:15 (3684): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-04 08:30:15 (3684): Guest Log: 00:00:00.000184 main     Log opened 2025-04-04T08:30:12.734969000Z
2025-04-04 08:30:15 (3684): Guest Log: 00:00:00.000294 main     OS Product: Linux
2025-04-04 08:30:15 (3684): Guest Log: 00:00:00.000471 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-04 08:30:15 (3684): Guest Log: 00:00:00.000508 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-04 08:30:15 (3684): Guest Log: 00:00:00.000536 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-04 08:30:15 (3684): Guest Log: 00:00:00.000537 main     Process ID: 1303
2025-04-04 08:30:15 (3684): Guest Log: 00:00:00.000538 main     Package type: LINUX_64BITS_GENERIC
2025-04-04 08:30:15 (3684): Guest Log: 00:00:00.001988 main     5.2.32 r132073 started. Verbose level = 0
2025-04-04 08:30:15 (3684): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-04 08:30:15 (3684): Guest Log: [INFO] Mounting shared directory
2025-04-04 08:30:15 (3684): Guest Log: [INFO] Checking for init_data.xml
2025-04-04 08:30:25 (3684): Guest Log: 00:00:10.004616 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 330 974 000ns (GuestNow=1 743 744 624 407 193 000 ns GuestLast=1 743 755 412 738 167 000 ns fSetTimeLastLoop=true )
2025-04-04 08:32:55 (3684): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-04 08:32:55 (3684): Guest Log: [INFO] Detected branch: prod
2025-04-04 08:32:55 (3684): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-04 08:32:55 (3684): Guest Log: Copying input files
2025-04-04 08:32:57 (3684): Guest Log: Copied input files into RunAtlas.
2025-04-04 08:32:57 (3684): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-04 08:32:57 (3684): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-04 08:32:57 (3684): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-04 08:32:57 (3684): Guest Log: Further information can be found at the LHC@home message board.
2025-04-04 08:35:36 (3684): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-04 08:35:36 (3684): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-04 08:35:36 (3684): Guest Log: 2.6.3.0 1615 4 32224 144478 3 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-04 08:35:37 (3684): Guest Log: copied the webapp to /var/www
2025-04-04 08:35:37 (3684): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-04 08:35:37 (3684): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-04 08:35:37 (3684): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-04 08:35:37 (3684): Guest Log:  *** Starting ATLAS job. (PandaID=6584906221 taskID=44004367) ***
2025-04-04 10:10:01 (3684): Status Report: Elapsed Time: '6000.000000'
2025-04-04 10:10:01 (3684): Status Report: CPU Time: '18536.531250'
2025-04-04 11:50:05 (3684): Status Report: Elapsed Time: '12000.000000'
2025-04-04 11:50:05 (3684): Status Report: CPU Time: '42278.140625'
2025-04-04 12:09:12 (3684): Guest Log:  *** Job finished ***
2025-04-04 12:09:12 (3684): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:08:57,336 | INFO     | [data] queue_monitor thread has finished
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:03,316 | INFO     | job.realtimelogging is not enabled
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:04,323 | INFO     | [payload] run_realtimelog thread has finished
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:05,519 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139939810559808)>', '<ExcThread(monitor, started 139939161306880)>']
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:06,170 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:06,170 | INFO     | [monitor] control thread has ended
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:10,525 | INFO     | all workflow threads have been joined
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:10,525 | INFO     | end of generic workflow (traces error code: 0)
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:10,525 | INFO     | traces error code: 0
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:10,526 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:10,639 [wrapper] ==== pilot stdout END ====
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:10,646 [wrapper] ==== wrapper stdout RESUME ====
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:10,653 [wrapper] pilotpid: 5978
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:10,658 [wrapper] Pilot exit status: 0
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:10,779 [wrapper] pandaids: 6584906221
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:10,822 [wrapper] cleanup supervisor_pilot 12886 5979
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:10,831 [wrapper] Test setup, not cleaning
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:10,838 [wrapper] apfmon messages muted
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:10,844 [wrapper] ==== wrapper stdout END ====
2025-04-04 12:09:12 (3684): Guest Log: 2025-04-04 09:09:10,849 [wrapper] ==== wrapper stderr END ====
2025-04-04 12:09:12 (3684): Guest Log:  *** Error codes and diagnostics ***
2025-04-04 12:09:12 (3684): Guest Log:     "exeErrorCode": 0,
2025-04-04 12:09:12 (3684): Guest Log:     "exeErrorDiag": "",
2025-04-04 12:09:12 (3684): Guest Log:     "pilotErrorCode": 0,
2025-04-04 12:09:12 (3684): Guest Log:     "pilotErrorDiag": "",
2025-04-04 12:09:12 (3684): Guest Log:  *** Listing of results directory ***
2025-04-04 12:09:12 (3684): Guest Log: total 194712
2025-04-04 12:09:12 (3684): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Apr  3 00:19 pilot3.tar.gz
2025-04-04 12:09:12 (3684): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  3 00:54 runpilot2-wrapper.sh
2025-04-04 12:09:12 (3684): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Apr  3 00:54 queuedata.json
2025-04-04 12:09:12 (3684): Guest Log: -rwxr-xr-x. 1 atlas atlas      8857 Apr  4 05:32 init_data.xml
2025-04-04 12:09:12 (3684): Guest Log: -rwxr-xr-x. 1 atlas atlas    507240 Apr  4 05:32 input.tar.gz
2025-04-04 12:09:12 (3684): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  4 05:32 start_atlas.sh
2025-04-04 12:09:12 (3684): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  4 05:32 EVNT.44004365._000228.pool.root.1 -> /data/./ATLAS.root_0
2025-04-04 12:09:12 (3684): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Apr  4 05:35 pandaJob.out
2025-04-04 12:09:12 (3684): Guest Log: -rw-------. 1 atlas atlas       424 Apr  4 05:35 setup.sh.local
2025-04-04 12:09:12 (3684): Guest Log: -rw-------. 1 atlas atlas    979986 Apr  4 05:37 agis_schedconf.cvmfs.json
2025-04-04 12:09:12 (3684): Guest Log: drwx------. 4 atlas atlas      4096 Apr  4 05:37 pilot3
2025-04-04 12:09:12 (3684): Guest Log: -rw-------. 1 atlas atlas        95 Apr  4 09:07 pilot_heartbeat.json
2025-04-04 12:09:12 (3684): Guest Log: -rw-------. 1 atlas atlas 192817270 Apr  4 09:08 HITS.44004367._005694.pool.root.1
2025-04-04 12:09:12 (3684): Guest Log: -rw-------. 1 atlas atlas      1034 Apr  4 09:08 memory_monitor_summary.json
2025-04-04 12:09:12 (3684): Guest Log: -rw-------. 1 atlas atlas   1603525 Apr  4 09:08 agis_ddmendpoints.agis.ALL.json
2025-04-04 12:09:12 (3684): Guest Log: -rw-------. 1 atlas atlas    319313 Apr  4 09:08 log.44004367._005694.job.log.tgz.1
2025-04-04 12:09:12 (3684): Guest Log: -rw-------. 1 atlas atlas      7726 Apr  4 09:08 heartbeat.json
2025-04-04 12:09:12 (3684): Guest Log: -rw-------. 1 atlas atlas      4474 Apr  4 09:09 pilotlog.txt
2025-04-04 12:09:12 (3684): Guest Log: -rw-------. 1 atlas atlas   1084887 Apr  4 09:09 log.44004367._005694.job.log.1
2025-04-04 12:09:12 (3684): Guest Log: -rw-------. 1 atlas atlas       357 Apr  4 09:09 output.list
2025-04-04 12:09:12 (3684): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  4 09:09 runtime_log
2025-04-04 12:09:12 (3684): Guest Log: -rw-------. 1 atlas atlas   1423360 Apr  4 09:09 result.tar.gz
2025-04-04 12:09:12 (3684): Guest Log: -rw-------. 1 atlas atlas       671 Apr  4 09:09 WXTMDmq1NK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmNXsKDmo0bBtm.diag
2025-04-04 12:09:12 (3684): Guest Log: -rw-r--r--. 1 atlas atlas     10982 Apr  4 09:09 runtime_log.err
2025-04-04 12:09:12 (3684): Guest Log: Looking for outputfile HITS.44004367._005694.pool.root.1
2025-04-04 12:09:12 (3684): Guest Log: HITS file was successfully produced
2025-04-04 12:09:12 (3684): Guest Log: -rw-------. 1 atlas atlas 192817270 Apr  4 09:08 /home/atlas/RunAtlas/HITS.44004367._005694.pool.root.1
2025-04-04 12:09:13 (3684): Guest Log: Successfully finished the ATLAS job!
2025-04-04 12:09:13 (3684): Guest Log: Copying the results back to the shared directory!
2025-04-04 12:09:13 (3684): Guest Log:  *** Contents of shared directory: ***
2025-04-04 12:09:14 (3684): Guest Log: total 406096
2025-04-04 12:09:14 (3684): Guest Log: -rwxrwxrwx. 1 root root 221054025 Apr  4 05:29 ATLAS.root_0
2025-04-04 12:09:14 (3684): Guest Log: -rwxrwxrwx. 1 root root 192817270 Apr  4 09:09 HITS.pool.root.1
2025-04-04 12:09:14 (3684): Guest Log: -rwxrwxrwx. 1 root root      8857 Apr  4 05:29 init_data.xml
2025-04-04 12:09:14 (3684): Guest Log: -rwxrwxrwx. 1 root root    507240 Apr  3 05:11 input.tar.gz
2025-04-04 12:09:14 (3684): Guest Log: -rwxrwxrwx. 1 root root   1423360 Apr  4 09:09 result.tar.gz
2025-04-04 12:09:14 (3684): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  3 05:11 start_atlas.sh
2025-04-04 12:09:14 (3684): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-04 12:09:14 (3684): VM Completion File Detected.
2025-04-04 12:09:14 (3684): Powering off VM.
2025-04-04 12:09:14 (3684): Successfully stopped VM.
2025-04-04 12:09:14 (3684): Deregistering VM. (boinc_9874e0a7de14579e, slot#2)
2025-04-04 12:09:14 (3684): Removing network bandwidth throttle group from VM.
2025-04-04 12:09:15 (3684): Removing VM from VirtualBox.
12:09:20 (3684): called boinc_finish(0)

</stderr_txt>
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