Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-03 07:20:49 (30180): Detected: vboxwrapper 26206
2025-04-03 07:20:49 (30180): Detected: BOINC client v8.0.2
2025-04-03 07:20:50 (30180): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-03 07:20:50 (30180): Successfully copied 'init_data.xml' to the shared directory.
2025-04-03 07:20:50 (30180): Create VM. (boinc_768a66fd8b2ec8b5, slot#7)
2025-04-03 07:20:51 (30180): Setting Memory Size for VM. (4800MB)
2025-04-03 07:20:51 (30180): Setting CPU Count for VM. (8)
2025-04-03 07:20:51 (30180): Setting Chipset Options for VM.
2025-04-03 07:20:52 (30180): Setting Graphics Controller Options for VM.
2025-04-03 07:20:52 (30180): Setting Boot Options for VM.
2025-04-03 07:20:52 (30180): Setting Network Configuration for NAT.
2025-04-03 07:20:53 (30180): Enabling VM Network Access.
2025-04-03 07:20:53 (30180): Disabling USB Support for VM.
2025-04-03 07:20:53 (30180): Disabling COM Port Support for VM.
2025-04-03 07:20:53 (30180): Disabling LPT Port Support for VM.
2025-04-03 07:20:54 (30180): Disabling Audio Support for VM.
2025-04-03 07:20:54 (30180): Disabling Clipboard Support for VM.
2025-04-03 07:20:54 (30180): Disabling Drag and Drop Support for VM.
2025-04-03 07:20:54 (30180): Adding storage controller(s) to VM.
2025-04-03 07:20:55 (30180): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-03 07:20:57 (30180): Adding VirtualBox Guest Additions to VM.
2025-04-03 07:20:58 (30180): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-03 07:20:58 (30180): forwarding host port 6874 to guest port 80
2025-04-03 07:20:58 (30180): Enabling remote desktop for VM.
2025-04-03 07:20:59 (30180): Required extension pack not installed, remote desktop not enabled.
2025-04-03 07:20:59 (30180): Enabling shared directory for VM.
2025-04-03 07:20:59 (30180): Starting VM using VBoxManage interface. (boinc_768a66fd8b2ec8b5, slot#7)
2025-04-03 07:21:05 (30180): Successfully started VM. (PID = '38636')
2025-04-03 07:21:05 (30180): Reporting VM Process ID to BOINC.
2025-04-03 07:21:05 (30180): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-03 07:21:05 (30180): Guest Log: CPUID EDX: 0x178bfbff
2025-04-03 07:21:05 (30180): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-03 07:21:05 (30180): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-03 07:21:05 (30180): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-03 07:21:05 (30180): Detected: Web Application Enabled (http://localhost:6874)
2025-04-03 07:21:05 (30180): Preference change detected
2025-04-03 07:21:05 (30180): Setting CPU throttle for VM. (80%)
2025-04-03 07:21:06 (30180): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-03 07:21:07 (30180): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-03 07:21:07 (30180): Guest Log: BIOS: Booting from Hard Disk...
2025-04-03 07:21:10 (30180): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-03 07:21:10 (30180): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-03 07:21:10 (30180): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-03 07:21:17 (30180): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-03 07:21:17 (30180): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-03 07:21:23 (30180): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-03 07:21:23 (30180): Guest Log: 00:00:00.000190 main     Log opened 2025-04-03T07:21:21.605728000Z
2025-04-03 07:21:23 (30180): Guest Log: 00:00:00.000308 main     OS Product: Linux
2025-04-03 07:21:23 (30180): Guest Log: 00:00:00.000337 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-03 07:21:23 (30180): Guest Log: 00:00:00.000355 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-03 07:21:23 (30180): Guest Log: 00:00:00.000373 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-03 07:21:23 (30180): Guest Log: 00:00:00.000373 main     Process ID: 1365
2025-04-03 07:21:23 (30180): Guest Log: 00:00:00.000374 main     Package type: LINUX_64BITS_GENERIC
2025-04-03 07:21:23 (30180): Guest Log: 00:00:00.001115 main     5.2.32 r132073 started. Verbose level = 0
2025-04-03 07:21:23 (30180): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-03 07:21:23 (30180): Guest Log: [INFO] Mounting shared directory
2025-04-03 07:21:23 (30180): Guest Log: [INFO] Checking for init_data.xml
2025-04-03 07:21:26 (30180): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-03 07:21:26 (30180): Guest Log: [INFO] Detected branch: prod
2025-04-03 07:21:26 (30180): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-03 07:21:26 (30180): Guest Log: Copying input files
2025-04-03 07:21:30 (30180): Guest Log: Copied input files into RunAtlas.
2025-04-03 07:21:30 (30180): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-03 07:21:30 (30180): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-03 07:21:30 (30180): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-03 07:21:30 (30180): Guest Log: Further information can be found at the LHC@home message board.
2025-04-03 07:21:33 (30180): Guest Log: 00:00:10.004670 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 060 871 000ns (GuestNow=1 743 657 693 547 633 000 ns GuestLast=1 743 664 881 608 504 000 ns fSetTimeLastLoop=true )
2025-04-03 07:21:38 (30180): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-03 07:21:38 (30180): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-03 07:21:38 (30180): Guest Log: 2.6.3.0 1643 0 32044 144433 3 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-03 07:21:40 (30180): Guest Log: copied the webapp to /var/www
2025-04-03 07:21:40 (30180): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-03 07:21:40 (30180): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-03 07:21:40 (30180): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-03 07:21:40 (30180): Guest Log:  *** Starting ATLAS job. (PandaID=6583708608 taskID=43634898) ***
2025-04-03 09:01:09 (30180): Status Report: Elapsed Time: '6000.000000'
2025-04-03 09:01:09 (30180): Status Report: CPU Time: '35889.140625'
2025-04-03 09:41:59 (30180): Guest Log:  *** Job finished ***
2025-04-03 09:41:59 (30180): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:45,828 | INFO     | [data] queue_monitor thread has finished
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:51,620 | INFO     | job.realtimelogging is not enabled
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:52,621 | INFO     | [payload] run_realtimelog thread has finished
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:53,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140391573182272)>', '<ExcThread(monitor, started 140390988502784)>']
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:53,628 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:53,628 | INFO     | [monitor] control thread has ended
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:58,534 | INFO     | all workflow threads have been joined
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:58,534 | INFO     | end of generic workflow (traces error code: 0)
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:58,535 | INFO     | traces error code: 0
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:58,535 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:58,605 [wrapper] ==== pilot stdout END ====
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:58,610 [wrapper] ==== wrapper stdout RESUME ====
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:58,614 [wrapper] pilotpid: 6004
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:58,617 [wrapper] Pilot exit status: 0
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:58,690 [wrapper] pandaids: 6583708608
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:58,723 [wrapper] cleanup supervisor_pilot  7254 6005
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:58,728 [wrapper] Test setup, not cleaning
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:58,735 [wrapper] apfmon messages muted
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:58,741 [wrapper] ==== wrapper stdout END ====
2025-04-03 09:41:59 (30180): Guest Log: 2025-04-03 07:41:58,748 [wrapper] ==== wrapper stderr END ====
2025-04-03 09:41:59 (30180): Guest Log:  *** Error codes and diagnostics ***
2025-04-03 09:41:59 (30180): Guest Log:     "exeErrorCode": 0,
2025-04-03 09:41:59 (30180): Guest Log:     "exeErrorDiag": "",
2025-04-03 09:41:59 (30180): Guest Log:     "pilotErrorCode": 0,
2025-04-03 09:41:59 (30180): Guest Log:     "pilotErrorDiag": "",
2025-04-03 09:41:59 (30180): Guest Log:  *** Listing of results directory ***
2025-04-03 09:41:59 (30180): Guest Log: total 314760
2025-04-03 09:41:59 (30180): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Apr  2 00:59 pilot3.tar.gz
2025-04-03 09:41:59 (30180): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Apr  2 01:01 queuedata.json
2025-04-03 09:41:59 (30180): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  2 01:02 runpilot2-wrapper.sh
2025-04-03 09:41:59 (30180): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  3 05:21 start_atlas.sh
2025-04-03 09:41:59 (30180): Guest Log: -rwxr-xr-x. 1 atlas atlas    507251 Apr  3 05:21 input.tar.gz
2025-04-03 09:41:59 (30180): Guest Log: -rwxr-xr-x. 1 atlas atlas      9245 Apr  3 05:21 init_data.xml
2025-04-03 09:41:59 (30180): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  3 05:21 EVNT.43634896._000227.pool.root.1 -> /data/./ATLAS.root_0
2025-04-03 09:41:59 (30180): Guest Log: -rw-r--r--. 1 atlas atlas      2597 Apr  3 05:21 pandaJob.out
2025-04-03 09:41:59 (30180): Guest Log: -rw-------. 1 atlas atlas       424 Apr  3 05:21 setup.sh.local
2025-04-03 09:41:59 (30180): Guest Log: -rw-------. 1 atlas atlas    991169 Apr  3 05:22 agis_schedconf.cvmfs.json
2025-04-03 09:41:59 (30180): Guest Log: -rw-------. 1 atlas atlas   1603449 Apr  3 05:22 agis_ddmendpoints.agis.ALL.json
2025-04-03 09:41:59 (30180): Guest Log: drwx------. 4 atlas atlas      4096 Apr  3 05:22 pilot3
2025-04-03 09:41:59 (30180): Guest Log: -rw-------. 1 atlas atlas 316519836 Apr  3 07:40 HITS.43634898._009714.pool.root.1
2025-04-03 09:41:59 (30180): Guest Log: -rw-------. 1 atlas atlas        95 Apr  3 07:41 pilot_heartbeat.json
2025-04-03 09:41:59 (30180): Guest Log: -rw-------. 1 atlas atlas      1027 Apr  3 07:41 memory_monitor_summary.json
2025-04-03 09:41:59 (30180): Guest Log: -rw-------. 1 atlas atlas    339965 Apr  3 07:41 log.43634898._009714.job.log.tgz.1
2025-04-03 09:41:59 (30180): Guest Log: -rw-------. 1 atlas atlas      7707 Apr  3 07:41 heartbeat.json
2025-04-03 09:41:59 (30180): Guest Log: -rw-------. 1 atlas atlas      4790 Apr  3 07:41 pilotlog.txt
2025-04-03 09:41:59 (30180): Guest Log: -rw-------. 1 atlas atlas    671725 Apr  3 07:41 log.43634898._009714.job.log.1
2025-04-03 09:41:59 (30180): Guest Log: -rw-------. 1 atlas atlas       357 Apr  3 07:41 output.list
2025-04-03 09:41:59 (30180): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  3 07:41 runtime_log
2025-04-03 09:41:59 (30180): Guest Log: -rw-------. 1 atlas atlas   1034240 Apr  3 07:41 result.tar.gz
2025-04-03 09:41:59 (30180): Guest Log: -rw-------. 1 atlas atlas       664 Apr  3 07:41 xNkNDmef1J7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmykELDmtqmkHo.diag
2025-04-03 09:41:59 (30180): Guest Log: -rw-r--r--. 1 atlas atlas     10963 Apr  3 07:41 runtime_log.err
2025-04-03 09:41:59 (30180): Guest Log: Looking for outputfile HITS.43634898._009714.pool.root.1
2025-04-03 09:41:59 (30180): Guest Log: HITS file was successfully produced
2025-04-03 09:41:59 (30180): Guest Log: -rw-------. 1 atlas atlas 316519836 Apr  3 07:40 /home/atlas/RunAtlas/HITS.43634898._009714.pool.root.1
2025-04-03 09:42:01 (30180): Guest Log: Successfully finished the ATLAS job!
2025-04-03 09:42:01 (30180): Guest Log: Copying the results back to the shared directory!
2025-04-03 09:42:01 (30180): Guest Log:  *** Contents of shared directory: ***
2025-04-03 09:42:01 (30180): Guest Log: total 662724
2025-04-03 09:42:01 (30180): Guest Log: -rwxrwxrwx. 1 root root 360529402 Apr  3 05:20 ATLAS.root_0
2025-04-03 09:42:01 (30180): Guest Log: -rwxrwxrwx. 1 root root 316519836 Apr  3 07:42 HITS.pool.root.1
2025-04-03 09:42:01 (30180): Guest Log: -rwxrwxrwx. 1 root root      9245 Apr  3 05:20 init_data.xml
2025-04-03 09:42:01 (30180): Guest Log: -rwxrwxrwx. 1 root root    507251 Apr  3 04:54 input.tar.gz
2025-04-03 09:42:01 (30180): Guest Log: -rwxrwxrwx. 1 root root   1034240 Apr  3  2025 result.tar.gz
2025-04-03 09:42:01 (30180): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  3 04:54 start_atlas.sh
2025-04-03 09:42:01 (30180): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-03 09:42:01 (30180): VM Completion File Detected.
2025-04-03 09:42:01 (30180): Powering off VM.
2025-04-03 09:42:02 (30180): Successfully stopped VM.
2025-04-03 09:42:02 (30180): Deregistering VM. (boinc_768a66fd8b2ec8b5, slot#7)
2025-04-03 09:42:02 (30180): Removing network bandwidth throttle group from VM.
2025-04-03 09:42:03 (30180): Removing VM from VirtualBox.
09:42:08 (30180): called boinc_finish(0)

</stderr_txt>
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