Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-03 04:54:13 (7032): Detected: vboxwrapper 26206
2025-04-03 04:54:13 (7032): Detected: BOINC client v8.0.2
2025-04-03 04:54:14 (7032): Detected: VirtualBox VboxManage Interface (Version: 7.0.4)
2025-04-03 04:54:14 (7032): Successfully copied 'init_data.xml' to the shared directory.
2025-04-03 04:54:15 (7032): Create VM. (boinc_accbbd49b3e85796, slot#1)
2025-04-03 04:54:15 (7032): Setting Memory Size for VM. (4200MB)
2025-04-03 04:54:16 (7032): Setting CPU Count for VM. (2)
2025-04-03 04:54:16 (7032): Setting Chipset Options for VM.
2025-04-03 04:54:16 (7032): Setting Graphics Controller Options for VM.
2025-04-03 04:54:16 (7032): Setting Boot Options for VM.
2025-04-03 04:54:17 (7032): Setting Network Configuration for NAT.
2025-04-03 04:54:17 (7032): Enabling VM Network Access.
2025-04-03 04:54:17 (7032): Disabling USB Support for VM.
2025-04-03 04:54:18 (7032): Disabling COM Port Support for VM.
2025-04-03 04:54:18 (7032): Disabling LPT Port Support for VM.
2025-04-03 04:54:18 (7032): Disabling Audio Support for VM.
2025-04-03 04:54:18 (7032): Disabling Clipboard Support for VM.
2025-04-03 04:54:19 (7032): Disabling Drag and Drop Support for VM.
2025-04-03 04:54:19 (7032): Adding storage controller(s) to VM.
2025-04-03 04:54:19 (7032): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-03 04:54:22 (7032): Adding VirtualBox Guest Additions to VM.
2025-04-03 04:54:22 (7032): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-03 04:54:23 (7032): forwarding host port 59693 to guest port 80
2025-04-03 04:54:23 (7032): Enabling remote desktop for VM.
2025-04-03 04:54:23 (7032): Required extension pack not installed, remote desktop not enabled.
2025-04-03 04:54:23 (7032): Enabling shared directory for VM.
2025-04-03 04:54:24 (7032): Starting VM using VBoxManage interface. (boinc_accbbd49b3e85796, slot#1)
2025-04-03 04:54:33 (7032): Successfully started VM. (PID = '4812')
2025-04-03 04:54:33 (7032): Reporting VM Process ID to BOINC.
2025-04-03 04:54:33 (7032): Guest Log: BIOS: VirtualBox 7.0.4
2025-04-03 04:54:33 (7032): Guest Log: CPUID EDX: 0x178bfbff
2025-04-03 04:54:33 (7032): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-03 04:54:33 (7032): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-03 04:54:33 (7032): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-03 04:54:33 (7032): Detected: Web Application Enabled (http://localhost:59693)
2025-04-03 04:54:33 (7032): Preference change detected
2025-04-03 04:54:33 (7032): Setting CPU throttle for VM. (100%)
2025-04-03 04:54:33 (7032): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-03 04:54:35 (7032): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-03 04:54:35 (7032): Guest Log: BIOS: Booting from Hard Disk...
2025-04-03 04:54:39 (7032): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-03 04:54:39 (7032): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-03 04:54:39 (7032): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-03 04:54:47 (7032): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-03 04:54:47 (7032): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-03 04:55:02 (7032): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-03 04:55:02 (7032): Guest Log: 00:00:00.000307 main     Log opened 2025-04-03T04:55:01.607945000Z
2025-04-03 04:55:02 (7032): Guest Log: 00:00:00.000484 main     OS Product: Linux
2025-04-03 04:55:02 (7032): Guest Log: 00:00:00.000544 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-03 04:55:02 (7032): Guest Log: 00:00:00.000599 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-03 04:55:02 (7032): Guest Log: 00:00:00.000653 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-03 04:55:02 (7032): Guest Log: 00:00:00.000655 main     Process ID: 1241
2025-04-03 04:55:02 (7032): Guest Log: 00:00:00.000657 main     Package type: LINUX_64BITS_GENERIC
2025-04-03 04:55:02 (7032): Guest Log: 00:00:00.002415 main     5.2.32 r132073 started. Verbose level = 0
2025-04-03 04:55:02 (7032): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-03 04:55:02 (7032): Guest Log: [INFO] Mounting shared directory
2025-04-03 04:55:02 (7032): Guest Log: [INFO] Checking for init_data.xml
2025-04-03 04:55:12 (7032): Guest Log: 00:00:10.018523 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 167 405 000ns (GuestNow=1 743 652 512 449 830 000 ns GuestLast=1 743 656 101 617 235 000 ns fSetTimeLastLoop=true )
2025-04-03 04:55:55 (7032): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-03 04:55:55 (7032): Guest Log: [INFO] Detected branch: prod
2025-04-03 04:55:55 (7032): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-03 04:55:55 (7032): Guest Log: Copying input files
2025-04-03 04:55:57 (7032): Guest Log: Copied input files into RunAtlas.
2025-04-03 04:55:57 (7032): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-03 04:55:57 (7032): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-03 04:55:57 (7032): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-03 04:55:57 (7032): Guest Log: Further information can be found at the LHC@home message board.
2025-04-03 04:57:00 (7032): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-03 04:57:01 (7032): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-03 04:57:01 (7032): Guest Log: 2.6.3.0 1537 1 29480 144429 3 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
2025-04-03 04:57:02 (7032): Guest Log: copied the webapp to /var/www
2025-04-03 04:57:02 (7032): Guest Log: ATHENA_PROC_NUMBER=2
2025-04-03 04:57:02 (7032): Guest Log: ATHENA_CORE_NUMBER=2
2025-04-03 04:57:03 (7032): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-03 04:57:03 (7032): Guest Log:  *** Starting ATLAS job. (PandaID=6584901668 taskID=44004367) ***
2025-04-03 06:38:36 (7032): Status Report: Elapsed Time: '6000.069817'
2025-04-03 06:38:36 (7032): Status Report: CPU Time: '8498.562500'
2025-04-03 08:25:23 (7032): Status Report: Elapsed Time: '12000.086763'
2025-04-03 08:25:23 (7032): Status Report: CPU Time: '20532.500000'
2025-04-03 10:11:57 (7032): Status Report: Elapsed Time: '18000.290493'
2025-04-03 10:11:57 (7032): Status Report: CPU Time: '32560.421875'
2025-04-03 11:57:45 (7032): Status Report: Elapsed Time: '24001.052362'
2025-04-03 11:57:45 (7032): Status Report: CPU Time: '44477.828125'
2025-04-03 13:44:28 (7032): Status Report: Elapsed Time: '30001.847914'
2025-04-03 13:44:28 (7032): Status Report: CPU Time: '56517.015625'
2025-04-03 15:31:43 (7032): Status Report: Elapsed Time: '36002.355921'
2025-04-03 15:31:43 (7032): Status Report: CPU Time: '68636.953125'
2025-04-03 17:16:59 (7032): Status Report: Elapsed Time: '42002.696276'
2025-04-03 17:16:59 (7032): Status Report: CPU Time: '80479.359375'
2025-04-03 19:02:26 (7032): Status Report: Elapsed Time: '48003.450445'
2025-04-03 19:02:26 (7032): Status Report: CPU Time: '92341.671875'
2025-04-03 20:47:26 (7032): Status Report: Elapsed Time: '54004.436943'
2025-04-03 20:47:32 (7032): Status Report: CPU Time: '104168.359375'
2025-04-03 21:07:01 (7032): Guest Log:  *** Job finished ***
2025-04-03 21:07:01 (7032): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:48,024 | INFO     | [data] queue_monitor thread has finished
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:52,105 | INFO     | job.realtimelogging is not enabled
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:53,106 | INFO     | [payload] run_realtimelog thread has finished
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:53,668 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140202906576704)>', '<ExcThread(monitor, started 140202454525696)>']
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:53,790 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:53,791 | INFO     | [monitor] control thread has ended
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:58,675 | INFO     | all workflow threads have been joined
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:58,676 | INFO     | end of generic workflow (traces error code: 0)
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:58,677 | INFO     | traces error code: 0
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:58,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:58,889 [wrapper] ==== pilot stdout END ====
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:58,898 [wrapper] ==== wrapper stdout RESUME ====
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:58,909 [wrapper] pilotpid: 5924
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:58,918 [wrapper] Pilot exit status: 0
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:59,214 [wrapper] pandaids: 6584901668
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:59,282 [wrapper] cleanup supervisor_pilot 20968 5925
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:59,302 [wrapper] Test setup, not cleaning
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:59,311 [wrapper] apfmon messages muted
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:59,321 [wrapper] ==== wrapper stdout END ====
2025-04-03 21:07:01 (7032): Guest Log: 2025-04-03 20:06:59,330 [wrapper] ==== wrapper stderr END ====
2025-04-03 21:07:01 (7032): Guest Log:  *** Error codes and diagnostics ***
2025-04-03 21:07:01 (7032): Guest Log:     "exeErrorCode": 0,
2025-04-03 21:07:01 (7032): Guest Log:     "exeErrorDiag": "",
2025-04-03 21:07:01 (7032): Guest Log:     "pilotErrorCode": 0,
2025-04-03 21:07:01 (7032): Guest Log:     "pilotErrorDiag": "",
2025-04-03 21:07:01 (7032): Guest Log:  *** Listing of results directory ***
2025-04-03 21:07:01 (7032): Guest Log: total 211112
2025-04-03 21:07:01 (7032): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Apr  2 22:24 pilot3.tar.gz
2025-04-03 21:07:01 (7032): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Apr  2 22:31 queuedata.json
2025-04-03 21:07:01 (7032): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  2 22:33 runpilot2-wrapper.sh
2025-04-03 21:07:01 (7032): Guest Log: -rwxr-xr-x. 1 atlas atlas      6101 Apr  3 03:55 init_data.xml
2025-04-03 21:07:01 (7032): Guest Log: -rwxr-xr-x. 1 atlas atlas    507241 Apr  3 03:55 input.tar.gz
2025-04-03 21:07:01 (7032): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  3 03:55 start_atlas.sh
2025-04-03 21:07:01 (7032): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  3 03:55 EVNT.44004365._000191.pool.root.1 -> /data/./ATLAS.root_0
2025-04-03 21:07:01 (7032): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Apr  3 03:57 pandaJob.out
2025-04-03 21:07:01 (7032): Guest Log: -rw-------. 1 atlas atlas       424 Apr  3 03:57 setup.sh.local
2025-04-03 21:07:01 (7032): Guest Log: -rw-------. 1 atlas atlas    991540 Apr  3 04:02 agis_schedconf.cvmfs.json
2025-04-03 21:07:01 (7032): Guest Log: drwx------. 4 atlas atlas      4096 Apr  3 04:03 pilot3
2025-04-03 21:07:01 (7032): Guest Log: -rw-------. 1 atlas atlas 194887744 Apr  3 20:03 HITS.44004367._004756.pool.root.1
2025-04-03 21:07:01 (7032): Guest Log: -rw-------. 1 atlas atlas      1028 Apr  3 20:04 memory_monitor_summary.json
2025-04-03 21:07:01 (7032): Guest Log: -rw-------. 1 atlas atlas   1603525 Apr  3 20:04 agis_ddmendpoints.agis.ALL.json
2025-04-03 21:07:01 (7032): Guest Log: -rw-------. 1 atlas atlas    807790 Apr  3 20:04 log.44004367._004756.job.log.tgz.1
2025-04-03 21:07:01 (7032): Guest Log: -rw-------. 1 atlas atlas        96 Apr  3 20:05 pilot_heartbeat.json
2025-04-03 21:07:01 (7032): Guest Log: -rw-------. 1 atlas atlas      7725 Apr  3 20:06 heartbeat.json
2025-04-03 21:07:01 (7032): Guest Log: -rw-------. 1 atlas atlas      4660 Apr  3 20:06 pilotlog.txt
2025-04-03 21:07:01 (7032): Guest Log: -rw-------. 1 atlas atlas   7947390 Apr  3 20:06 log.44004367._004756.job.log.1
2025-04-03 21:07:01 (7032): Guest Log: -rw-------. 1 atlas atlas       357 Apr  3 20:06 output.list
2025-04-03 21:07:01 (7032): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  3 20:06 runtime_log
2025-04-03 21:07:01 (7032): Guest Log: -rw-------. 1 atlas atlas   8775680 Apr  3 20:06 result.tar.gz
2025-04-03 21:07:01 (7032): Guest Log: -rw-r--r--. 1 atlas atlas     10949 Apr  3 20:06 runtime_log.err
2025-04-03 21:07:01 (7032): Guest Log: -rw-------. 1 atlas atlas       664 Apr  3 20:06 J5ZKDmzoLK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmiAGLDmp6ufdn.diag
2025-04-03 21:07:01 (7032): Guest Log: Looking for outputfile HITS.44004367._004756.pool.root.1
2025-04-03 21:07:01 (7032): Guest Log: HITS file was successfully produced
2025-04-03 21:07:01 (7032): Guest Log: -rw-------. 1 atlas atlas 194887744 Apr  3 20:03 /home/atlas/RunAtlas/HITS.44004367._004756.pool.root.1
2025-04-03 21:07:04 (7032): Guest Log: Successfully finished the ATLAS job!
2025-04-03 21:07:04 (7032): Guest Log: Copying the results back to the shared directory!
2025-04-03 21:07:05 (7032): Guest Log:  *** Contents of shared directory: ***
2025-04-03 21:07:05 (7032): Guest Log: total 416996
2025-04-03 21:07:05 (7032): Guest Log: -rwxrwxrwx. 1 root root 222795551 Apr  3 03:54 ATLAS.root_0
2025-04-03 21:07:05 (7032): Guest Log: -rwxrwxrwx. 1 root root 194887744 Apr  3 20:07 HITS.pool.root.1
2025-04-03 21:07:05 (7032): Guest Log: -rwxrwxrwx. 1 root root      6101 Apr  3 03:54 init_data.xml
2025-04-03 21:07:05 (7032): Guest Log: -rwxrwxrwx. 1 root root    507241 Apr  3 02:53 input.tar.gz
2025-04-03 21:07:05 (7032): Guest Log: -rwxrwxrwx. 1 root root   8775680 Apr  3 20:07 result.tar.gz
2025-04-03 21:07:05 (7032): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  3 02:53 start_atlas.sh
2025-04-03 21:07:05 (7032): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-03 21:07:05 (7032): VM Completion File Detected.
2025-04-03 21:07:05 (7032): Powering off VM.
2025-04-03 21:07:06 (7032): Successfully stopped VM.
2025-04-03 21:07:06 (7032): Deregistering VM. (boinc_accbbd49b3e85796, slot#1)
2025-04-03 21:07:06 (7032): Removing network bandwidth throttle group from VM.
2025-04-03 21:07:06 (7032): Removing VM from VirtualBox.
21:07:11 (7032): called boinc_finish(0)

</stderr_txt>
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