Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:53:56 (1303): wrapper (7.7.26015): starting
00:53:56 (1303): wrapper: running run_atlas (--nthreads 12)
[2025-04-03 00:53:56] Arguments: --nthreads 12
[2025-04-03 00:53:56] Threads: 12
[2025-04-03 00:53:56] Checking for CVMFS
[2025-04-03 00:53:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 00:53:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 00:53:57] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 00:53:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 00:53:58] 2.11.2.0 15118 3492 90188 144424 1 185 23917210 25165825 0 130560 0 23712547 99.998 1044555 11095 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-04-03 00:53:58] CVMFS is ok
[2025-04-03 00:53:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 00:53:58] Checking for apptainer binary...
[2025-04-03 00:53:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 00:53:58] Running /usr/bin/apptainer --version
[2025-04-03 00:53:58] apptainer version 1.3.2-1.el7
[2025-04-03 00:53:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 00:54:02] cg-vwn116.simple-grid.lan
[2025-04-03 00:54:02] apptainer works
[2025-04-03 00:54:02] Set ATHENA_PROC_NUMBER=12
[2025-04-03 00:54:02] Set ATHENA_CORE_NUMBER=12
[2025-04-03 00:54:02] Starting ATLAS job with PandaID=6584891240
[2025-04-03 00:54:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-03 01:02:59]  *** The last 200 lines of the pilot log: ***
[2025-04-03 01:02:59] 2025-04-02 23:02:46,310 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-03 01:02:59] 2025-04-02 23:02:46,707 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-03 01:02:59] 2025-04-02 23:02:46,709 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6584891240/memory_monitor_output.txt
[2025-04-03 01:02:59] 2025-04-02 23:02:46,709 | INFO     | memory summary dictionary not yet available
[2025-04-03 01:02:59] 2025-04-02 23:02:46,710 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-03 01:02:59] 2025-04-02 23:02:46,710 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-03 01:02:59] 2025-04-02 23:02:46,712 | INFO     | ..............................
[2025-04-03 01:02:59] 2025-04-02 23:02:46,713 | INFO     | . Timing measurements:
[2025-04-03 01:02:59] 2025-04-02 23:02:46,713 | INFO     | . get job = 0 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,714 | INFO     | . initial setup = 2 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,714 | INFO     | . payload setup = 24 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,714 | INFO     | . stage-in = 0 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,715 | INFO     | . payload execution = 227 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,715 | INFO     | . stage-out = 0 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,715 | INFO     | . log creation = 0 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,716 | INFO     | ..............................
[2025-04-03 01:02:59] 2025-04-02 23:02:46,716 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-03 01:02:59] 2025-04-02 23:02:46,717 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6584891240/pilotlog.txt
[2025-04-03 01:02:59] 2025-04-02 23:02:46,780 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-04-03 01:02:59] - Log from pilotlog.txt -
[2025-04-03 01:02:59] 2025-04-02 23:02:43,805 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-03 01:02:59] 2025-04-02 23:02:46,309 | INFO     | monitor loop #145: job 0:6584891240 is in state 'failed'
[2025-04-03 01:02:59] 2025-04-02 23:02:46,310 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-03 01:02:59] 2025-04-02 23:02:46,707 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-03 01:02:59] 2025-04-02 23:02:46,709 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6584891240/memory_monitor_output.txt
[2025-04-03 01:02:59] 2025-04-02 23:02:46,709 | INFO     | memory summary dictionary not yet available
[2025-04-03 01:02:59] 2025-04-02 23:02:46,710 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-03 01:02:59] 2025-04-02 23:02:46,710 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-03 01:02:59] 2025-04-02 23:02:46,712 | INFO     | ..............................
[2025-04-03 01:02:59] 2025-04-02 23:02:46,713 | INFO     | . Timing measurements:
[2025-04-03 01:02:59] 2025-04-02 23:02:46,713 | INFO     | . get job = 0 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,714 | INFO     | . initial setup = 2 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,714 | INFO     | . payload setup = 24 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,714 | INFO     | . stage-in = 0 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,715 | INFO     | . payload execution = 227 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,715 | INFO     | . stage-out = 0 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,715 | INFO     | . log creation = 0 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,716 | INFO     | ..............................
[2025-04-03 01:02:59] 2025-04-02 23:02:46,716 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-03 01:02:59] 2025-04-02 23:02:46,717 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6584891240/pilotlog.txt
[2025-04-03 01:02:59] 2025-04-02 23:02:46,782 | WARNING  | 
[2025-04-03 01:02:59] [begin log extracts]
[2025-04-03 01:02:59] - Log from pilotlog.txt -
[2025-04-03 01:02:59] 2025-04-02 23:02:43,805 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-03 01:02:59] 2025-04-02 23:02:46,309 | INFO     | monitor loop #145: job 0:6584891240 is in state 'failed'
[2025-04-03 01:02:59] 2025-04-02 23:02:46,310 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-03 01:02:59] 2025-04-02 23:02:46,707 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-03 01:02:59] 2025-04-02 23:02:46,709 | WARNING  | file does not exist either: /var/lib/boinc/slots/1/PanDA_Pilot-6584891240/memory_monitor_output.txt
[2025-04-03 01:02:59] 2025-04-02 23:02:46,709 | INFO     | memory summary dictionary not yet available
[2025-04-03 01:02:59] 2025-04-02 23:02:46,710 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-03 01:02:59] 2025-04-02 23:02:46,710 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-03 01:02:59] 2025-04-02 23:02:46,712 | INFO     | ..............................
[2025-04-03 01:02:59] 2025-04-02 23:02:46,713 | INFO     | . Timing measurements:
[2025-04-03 01:02:59] 2025-04-02 23:02:46,713 | INFO     | . get job = 0 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,714 | INFO     | . initial setup = 2 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,714 | INFO     | . payload setup = 24 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,714 | INFO     | . stage-in = 0 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,715 | INFO     | . payload execution = 227 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,715 | INFO     | . stage-out = 0 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,715 | INFO     | . log creation = 0 s
[2025-04-03 01:02:59] 2025-04-02 23:02:46,716 | INFO     | ..............................
[2025-04-03 01:02:59] 2025-04-02 23:02:46,716 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-03 01:02:59] 2025-04-02 23:02:46,717 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/1/PanDA_Pilot-6584891240/pilotlog.txt
[2025-04-03 01:02:59] [end log extracts]
[2025-04-03 01:02:59] 2025-04-02 23:02:46,783 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-04-03 01:02:59] 2025-04-02 23:02:46,785 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-04-03 01:02:59] 2025-04-02 23:02:46,997 | INFO     | 491s have passed since pilot start
[2025-04-03 01:02:59] 2025-04-02 23:02:47,045 | INFO     | 
[2025-04-03 01:02:59] 2025-04-02 23:02:47,046 | INFO     | job summary report
[2025-04-03 01:02:59] 2025-04-02 23:02:47,046 | INFO     | --------------------------------------------------
[2025-04-03 01:02:59] 2025-04-02 23:02:47,047 | INFO     | PanDA job id: 6584891240
[2025-04-03 01:02:59] 2025-04-02 23:02:47,047 | INFO     | task id: 44004367
[2025-04-03 01:02:59] 2025-04-02 23:02:47,047 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-04-02 22:59:23,510 CRITICAL Transform executor raised TransformValidationExceptio
[2025-04-03 01:02:59] 2025-04-02 23:02:47,048 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-03 01:02:59] 2025-04-02 23:02:47,048 | INFO     | pilot state: failed 
[2025-04-03 01:02:59] 2025-04-02 23:02:47,049 | INFO     | transexitcode: 65
[2025-04-03 01:02:59] 2025-04-02 23:02:47,049 | INFO     | exeerrorcode: 65
[2025-04-03 01:02:59] 2025-04-02 23:02:47,049 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-04-03 01:02:59] 2025-04-02 23:02:47,050 | INFO     | exitcode: 65
[2025-04-03 01:02:59] 2025-04-02 23:02:47,050 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-04-03 01:02:59] 2025-04-02 23:02:47,051 | INFO     | cpuconsumptiontime: 264 s
[2025-04-03 01:02:59] 2025-04-02 23:02:47,051 | INFO     | nevents: 0
[2025-04-03 01:02:59] 2025-04-02 23:02:47,052 | INFO     | neventsw: 0
[2025-04-03 01:02:59] 2025-04-02 23:02:47,052 | INFO     | pid: 11499
[2025-04-03 01:02:59] 2025-04-02 23:02:47,052 | INFO     | pgrp: 11499
[2025-04-03 01:02:59] 2025-04-02 23:02:47,053 | INFO     | corecount: 12
[2025-04-03 01:02:59] 2025-04-02 23:02:47,053 | INFO     | event service: False
[2025-04-03 01:02:59] 2025-04-02 23:02:47,053 | INFO     | sizes: {0: 2416405, 1: 2417090, 2: 2417289, 13: 2417289, 17: 2417551, 24: 2417579, 316: 2441091, 318: 2445329, 319: 2445385, 450: 2445555}
[2025-04-03 01:02:59] 2025-04-02 23:02:47,054 | INFO     | --------------------------------------------------
[2025-04-03 01:02:59] 2025-04-02 23:02:47,054 | INFO     | 
[2025-04-03 01:02:59] 2025-04-02 23:02:47,054 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-04-03 01:02:59] 2025-04-02 23:02:47,139 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,141 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,141 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,142 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,142 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,143 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,143 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,143 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,144 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,144 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,147 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,147 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-03 01:02:59] 2025-04-02 23:02:47,148 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,148 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-03 01:02:59] 2025-04-02 23:02:47,149 | INFO     | job 6584891240 has completed (purged errors)
[2025-04-03 01:02:59] 2025-04-02 23:02:47,149 | INFO     | overall cleanup function is called
[2025-04-03 01:02:59] 2025-04-02 23:02:48,155 | INFO     | --- collectZombieJob: --- 10, [11499]
[2025-04-03 01:02:59] 2025-04-02 23:02:48,156 | INFO     | zombie collector waiting for pid 11499
[2025-04-03 01:02:59] 2025-04-02 23:02:48,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-03 01:02:59] 2025-04-02 23:02:48,157 | INFO     | collected zombie processes
[2025-04-03 01:02:59] 2025-04-02 23:02:48,158 | INFO     | will attempt to kill all subprocesses of pid=11499
[2025-04-03 01:02:59] 2025-04-02 23:02:48,292 | INFO     | PID=5005 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-03 01:02:59] 2025-04-02 23:02:48,323 | INFO     | process IDs to be killed: [11499] (in reverse order)
[2025-04-03 01:02:59] 2025-04-02 23:02:48,479 | WARNING  | found no corresponding commands to process id(s)
[2025-04-03 01:02:59] 2025-04-02 23:02:48,480 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-03 01:02:59] 2025-04-02 23:02:48,487 | INFO     | did not find any defunct processes belonging to 11499
[2025-04-03 01:02:59] 2025-04-02 23:02:48,493 | INFO     | did not find any defunct processes belonging to 11499
[2025-04-03 01:02:59] 2025-04-02 23:02:48,494 | INFO     | ready for new job
[2025-04-03 01:02:59] 2025-04-02 23:02:48,494 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-03 01:02:59] 2025-04-02 23:02:48,498 | INFO     | ***************************************
[2025-04-03 01:02:59] 2025-04-02 23:02:48,499 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-03 01:02:59] 2025-04-02 23:02:48,499 | INFO     | ***************************************
[2025-04-03 01:02:59] 2025-04-02 23:02:48,500 | INFO     | 
[2025-04-03 01:02:59] 2025-04-02 23:02:48,502 | INFO     | pilot is running in a VM
[2025-04-03 01:02:59] 2025-04-02 23:02:48,502 | INFO     | architecture information:
[2025-04-03 01:02:59] 2025-04-02 23:02:48,504 | INFO     | executing command: cat /etc/os-release
[2025-04-03 01:02:59] 2025-04-02 23:02:48,568 | INFO     | cat /etc/os-release:
[2025-04-03 01:02:59] NAME="CentOS Linux"
[2025-04-03 01:02:59] VERSION="7 (Core)"
[2025-04-03 01:02:59] ID="centos"
[2025-04-03 01:02:59] ID_LIKE="rhel fedora"
[2025-04-03 01:02:59] VERSION_ID="7"
[2025-04-03 01:02:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-03 01:02:59] ANSI_COLOR="0;31"
[2025-04-03 01:02:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-03 01:02:59] HOME_URL="https://www.centos.org/"
[2025-04-03 01:02:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-03 01:02:59] 
[2025-04-03 01:02:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-03 01:02:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-03 01:02:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-03 01:02:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-03 01:02:59] 
[2025-04-03 01:02:59] 2025-04-02 23:02:48,569 | INFO     | ***************************************
[2025-04-03 01:02:59] 2025-04-02 23:02:49,073 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-04-03 01:02:59] 2025-04-02 23:02:49,141 | INFO     | sufficient remaining disk space (259666214912 B)
[2025-04-03 01:02:59] 2025-04-02 23:02:49,142 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-03 01:02:59] 2025-04-02 23:02:49,142 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-03 01:02:59] 2025-04-02 23:02:49,143 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-03 01:02:59] 2025-04-02 23:02:49,145 | INFO     | found 0 job(s) in 20 queues
[2025-04-03 01:02:59] 2025-04-02 23:02:49,145 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-03 01:02:59] 2025-04-02 23:02:49,146 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-03 01:02:59] 2025-04-02 23:02:49,147 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-03 01:02:59] 2025-04-02 23:02:49,148 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-03 01:02:59] 2025-04-02 23:02:49,506 | INFO     | all payload control threads have been joined
[2025-04-03 01:02:59] 2025-04-02 23:02:49,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-03 01:02:59] 2025-04-02 23:02:49,821 | INFO     | aborting loop
[2025-04-03 01:02:59] 2025-04-02 23:02:50,007 | INFO     | all data control threads have been joined
[2025-04-03 01:02:59] 2025-04-02 23:02:50,149 | INFO     | [job] retrieve thread has finished
[2025-04-03 01:02:59] 2025-04-02 23:02:50,365 | INFO     | all job control threads have been joined
[2025-04-03 01:02:59] 2025-04-02 23:02:50,451 | INFO     | [payload] failed_post thread has finished
[2025-04-03 01:02:59] 2025-04-02 23:02:50,513 | INFO     | [payload] control thread has finished
[2025-04-03 01:02:59] 2025-04-02 23:02:50,562 | INFO     | [job] create_data_payload thread has finished
[2025-04-03 01:02:59] 2025-04-02 23:02:50,635 | INFO     | [payload] execute_payloads thread has finished
[2025-04-03 01:02:59] 2025-04-02 23:02:50,827 | INFO     | [job] job monitor thread has finished
[2025-04-03 01:02:59] 2025-04-02 23:02:50,966 | INFO     | [payload] validate_post thread has finished
[2025-04-03 01:02:59] 2025-04-02 23:02:51,011 | INFO     | [data] control thread has finished
[2025-04-03 01:02:59] 2025-04-02 23:02:51,029 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-03 01:02:59] 2025-04-02 23:02:51,093 | INFO     | [payload] validate_pre thread has finished
[2025-04-03 01:02:59] 2025-04-02 23:02:51,154 | INFO     | [data] copytool_out thread has finished
[2025-04-03 01:02:59] 2025-04-02 23:02:51,186 | INFO     | [job] validate thread has finished
[2025-04-03 01:02:59] 2025-04-02 23:02:51,372 | INFO     | [job] control thread has finished
[2025-04-03 01:02:59] 2025-04-02 23:02:51,398 | INFO     | [data] copytool_in thread has finished
[2025-04-03 01:02:59] 2025-04-02 23:02:51,967 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-03 01:02:59] 2025-04-02 23:02:52,973 | INFO     | [job] queue monitor thread has finished
[2025-04-03 01:02:59] 2025-04-02 23:02:53,157 | INFO     | [data] queue_monitor thread has finished
[2025-04-03 01:02:59] 2025-04-02 23:02:53,222 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140676809520960)>', '<ExcThread(monitor, started 140675974670080)>']
[2025-04-03 01:02:59] 2025-04-02 23:02:54,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-03 01:02:59] 2025-04-02 23:02:54,171 | INFO     | [monitor] control thread has ended
[2025-04-03 01:02:59] 2025-04-02 23:02:58,249 | INFO     | all workflow threads have been joined
[2025-04-03 01:02:59] 2025-04-02 23:02:58,250 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-03 01:02:59] 2025-04-02 23:02:58,251 | INFO     | traces error code: 0
[2025-04-03 01:02:59] 2025-04-02 23:02:58,251 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-03 01:02:59] 2025-04-02 23:02:58,506 [wrapper] ==== pilot stdout END ====
[2025-04-03 01:02:59] 2025-04-02 23:02:58,537 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-03 01:02:59] 2025-04-02 23:02:58,549 [wrapper] pilotpid: 5005
[2025-04-03 01:02:59] 2025-04-02 23:02:58,561 [wrapper] Pilot exit status: 0
[2025-04-03 01:02:59] 2025-04-02 23:02:58,608 [wrapper] pandaids: 6584891240
[2025-04-03 01:02:59] 2025-04-02 23:02:58,715 [wrapper] cleanup supervisor_pilot  5011 5006
[2025-04-03 01:02:59] 2025-04-02 23:02:58,729 [wrapper] Test setup, not cleaning
[2025-04-03 01:02:59] 2025-04-02 23:02:58,742 [wrapper] apfmon messages muted
[2025-04-03 01:02:59] 2025-04-02 23:02:58,755 [wrapper] ==== wrapper stdout END ====
[2025-04-03 01:02:59] 2025-04-02 23:02:58,767 [wrapper] ==== wrapper stderr END ====
[2025-04-03 01:02:59]  *** Error codes and diagnostics ***
[2025-04-03 01:02:59]     "exeErrorCode": 65,
[2025-04-03 01:02:59]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-04-03 01:02:59]     "pilotErrorCode": 1305,
[2025-04-03 01:02:59]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-04-03 01:02:59]  *** Listing of results directory ***
[2025-04-03 01:02:59] total 219524
[2025-04-03 01:02:59] -rw-r--r--. 1 boinc boinc    494584 Apr  2 18:26 pilot3.tar.gz
[2025-04-03 01:02:59] -rwx------. 1 boinc boinc     37140 Apr  2 19:21 runpilot2-wrapper.sh
[2025-04-03 01:02:59] -rw-r--r--. 1 boinc boinc      5112 Apr  2 19:21 queuedata.json
[2025-04-03 01:02:59] -rw-r--r--. 1 boinc boinc       100 Apr  3 00:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-03 01:02:59] -rwxr-xr-x. 1 boinc boinc      7986 Apr  3 00:53 run_atlas
[2025-04-03 01:02:59] -rw-r--r--. 1 boinc boinc       105 Apr  3 00:53 job.xml
[2025-04-03 01:02:59] -rw-r--r--. 2 boinc boinc 220574194 Apr  3 00:53 EVNT.44004365._000102.pool.root.1
[2025-04-03 01:02:59] -rw-r--r--. 1 boinc boinc      6072 Apr  3 00:53 init_data.xml
[2025-04-03 01:02:59] drwxrwx--x. 2 boinc boinc        68 Apr  3 00:53 shared
[2025-04-03 01:02:59] -rw-r--r--. 2 boinc boinc    507233 Apr  3 00:53 input.tar.gz
[2025-04-03 01:02:59] -rw-r--r--. 2 boinc boinc     17571 Apr  3 00:53 start_atlas.sh
[2025-04-03 01:02:59] -rw-r--r--. 1 boinc boinc         0 Apr  3 00:53 boinc_lockfile
[2025-04-03 01:02:59] -rw-r--r--. 1 boinc boinc      2549 Apr  3 00:54 pandaJob.out
[2025-04-03 01:02:59] -rw-------. 1 boinc boinc       424 Apr  3 00:54 setup.sh.local
[2025-04-03 01:02:59] -rw-------. 1 boinc boinc    991540 Apr  3 00:54 agis_schedconf.cvmfs.json
[2025-04-03 01:02:59] -rw-------. 1 boinc boinc   1603449 Apr  3 00:54 agis_ddmendpoints.agis.ALL.json
[2025-04-03 01:02:59] drwx------. 4 boinc boinc      4096 Apr  3 00:54 pilot3
[2025-04-03 01:02:59] -rw-r--r--. 1 boinc boinc       526 Apr  3 00:59 boinc_task_state.xml
[2025-04-03 01:02:59] -rw-------. 1 boinc boinc     48204 Apr  3 01:00 log.44004367._002540.job.log.tgz.1
[2025-04-03 01:02:59] -rw-------. 1 boinc boinc        95 Apr  3 01:02 pilot_heartbeat.json
[2025-04-03 01:02:59] -rw-------. 1 boinc boinc      8014 Apr  3 01:02 heartbeat.json
[2025-04-03 01:02:59] -rw-r--r--. 1 boinc boinc      8192 Apr  3 01:02 boinc_mmap_file
[2025-04-03 01:02:59] -rw-r--r--. 1 boinc boinc        24 Apr  3 01:02 wrapper_checkpoint.txt
[2025-04-03 01:02:59] -rw-------. 1 boinc boinc      4405 Apr  3 01:02 pilotlog.txt
[2025-04-03 01:02:59] -rw-------. 1 boinc boinc    149401 Apr  3 01:02 log.44004367._002540.job.log.1
[2025-04-03 01:02:59] -rw-------. 1 boinc boinc       188 Apr  3 01:02 output.list
[2025-04-03 01:02:59] -rw-r--r--. 1 boinc boinc       620 Apr  3 01:02 runtime_log
[2025-04-03 01:02:59] -rw-------. 1 boinc boinc    215040 Apr  3 01:02 result.tar.gz
[2025-04-03 01:02:59] -rw-------. 1 boinc boinc       640 Apr  3 01:02 xwJKDmoxGK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmgnFLDmsPTXOm.diag
[2025-04-03 01:02:59] -rw-r--r--. 1 boinc boinc     10862 Apr  3 01:02 runtime_log.err
[2025-04-03 01:02:59] -rw-r--r--. 1 boinc boinc     21622 Apr  3 01:02 stderr.txt
[2025-04-03 01:02:59] No HITS result produced
[2025-04-03 01:02:59]  *** Contents of shared directory: ***
[2025-04-03 01:02:59] total 216136
[2025-04-03 01:02:59] -rw-r--r--. 2 boinc boinc 220574194 Apr  3 00:53 ATLAS.root_0
[2025-04-03 01:02:59] -rw-r--r--. 2 boinc boinc    507233 Apr  3 00:53 input.tar.gz
[2025-04-03 01:02:59] -rw-r--r--. 2 boinc boinc     17571 Apr  3 00:53 start_atlas.sh
[2025-04-03 01:02:59] -rw-------. 1 boinc boinc    215040 Apr  3 01:02 result.tar.gz
01:03:00 (1303): run_atlas exited; CPU time 200.934394
01:03:00 (1303): called boinc_finish(0)

</stderr_txt>
]]>

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