Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-02 22:38:20 (20820): Detected: vboxwrapper 26206
2025-04-02 22:38:20 (20820): Detected: BOINC client v8.0.4
2025-04-02 22:38:21 (20820): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-02 22:38:21 (20820): Successfully copied 'init_data.xml' to the shared directory.
2025-04-02 22:38:22 (20820): Create VM. (boinc_612388c4a49baa84, slot#20)
2025-04-02 22:38:22 (20820): Setting Memory Size for VM. (4096MB)
2025-04-02 22:38:23 (20820): Setting CPU Count for VM. (1)
2025-04-02 22:38:23 (20820): Setting Chipset Options for VM.
2025-04-02 22:38:23 (20820): Setting Graphics Controller Options for VM.
2025-04-02 22:38:23 (20820): Setting Boot Options for VM.
2025-04-02 22:38:24 (20820): Setting Network Configuration for NAT.
2025-04-02 22:38:24 (20820): Enabling VM Network Access.
2025-04-02 22:38:24 (20820): Disabling USB Support for VM.
2025-04-02 22:38:24 (20820): Disabling COM Port Support for VM.
2025-04-02 22:38:25 (20820): Disabling LPT Port Support for VM.
2025-04-02 22:38:25 (20820): Disabling Audio Support for VM.
2025-04-02 22:38:25 (20820): Disabling Clipboard Support for VM.
2025-04-02 22:38:26 (20820): Disabling Drag and Drop Support for VM.
2025-04-02 22:38:26 (20820): Adding storage controller(s) to VM.
2025-04-02 22:38:26 (20820): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-02 22:38:27 (20820): Adding VirtualBox Guest Additions to VM.
2025-04-02 22:38:27 (20820): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-02 22:38:27 (20820): forwarding host port 61676 to guest port 80
2025-04-02 22:38:27 (20820): Enabling remote desktop for VM.
2025-04-02 22:38:28 (20820): Required extension pack not installed, remote desktop not enabled.
2025-04-02 22:38:28 (20820): Enabling shared directory for VM.
2025-04-02 22:38:28 (20820): Starting VM using VBoxManage interface. (boinc_612388c4a49baa84, slot#20)
2025-04-02 22:38:32 (20820): Successfully started VM. (PID = '3400')
2025-04-02 22:38:32 (20820): Reporting VM Process ID to BOINC.
2025-04-02 22:38:32 (20820): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-02 22:38:32 (20820): Guest Log: CPUID EDX: 0x178bfbff
2025-04-02 22:38:32 (20820): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-02 22:38:32 (20820): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-02 22:38:32 (20820): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-02 22:38:32 (20820): Detected: Web Application Enabled (http://localhost:61676)
2025-04-02 22:38:32 (20820): Preference change detected
2025-04-02 22:38:32 (20820): Setting CPU throttle for VM. (100%)
2025-04-02 22:38:32 (20820): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-02 22:38:34 (20820): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-02 22:38:34 (20820): Guest Log: BIOS: Booting from Hard Disk...
2025-04-02 22:38:36 (20820): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-02 22:38:36 (20820): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-02 22:38:36 (20820): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-02 22:38:39 (20820): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-02 22:38:39 (20820): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-02 22:38:43 (20820): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-02 22:38:43 (20820): Guest Log: 00:00:00.000061 main     Log opened 2025-04-02T22:38:41.659315000Z
2025-04-02 22:38:43 (20820): Guest Log: 00:00:00.000133 main     OS Product: Linux
2025-04-02 22:38:43 (20820): Guest Log: 00:00:00.000147 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-02 22:38:43 (20820): Guest Log: 00:00:00.000157 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-02 22:38:43 (20820): Guest Log: 00:00:00.000168 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-02 22:38:43 (20820): Guest Log: 00:00:00.000168 main     Process ID: 1244
2025-04-02 22:38:43 (20820): Guest Log: 00:00:00.000168 main     Package type: LINUX_64BITS_GENERIC
2025-04-02 22:38:43 (20820): Guest Log: 00:00:00.000731 main     5.2.32 r132073 started. Verbose level = 0
2025-04-02 22:38:43 (20820): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-02 22:38:43 (20820): Guest Log: [INFO] Mounting shared directory
2025-04-02 22:38:43 (20820): Guest Log: [INFO] Checking for init_data.xml
2025-04-02 22:38:45 (20820): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-02 22:38:45 (20820): Guest Log: [INFO] Detected branch: prod
2025-04-02 22:38:45 (20820): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-02 22:38:45 (20820): Guest Log: Copying input files
2025-04-02 22:38:46 (20820): Guest Log: Copied input files into RunAtlas.
2025-04-02 22:38:46 (20820): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-04-02 22:38:53 (20820): Guest Log: 00:00:10.007748 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 529 065 000ns (GuestNow=1 743 626 333 137 452 000 ns GuestLast=1 743 633 521 666 517 000 ns fSetTimeLastLoop=true )
2025-04-02 22:38:55 (20820): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-02 22:38:55 (20820): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-02 22:38:55 (20820): Guest Log: 2.6.3.0 1514 0 31532 144420 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-04-02 22:38:55 (20820): Guest Log: copied the webapp to /var/www
2025-04-02 22:38:55 (20820): Guest Log: core_number=1
2025-04-02 22:38:55 (20820): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-02 22:38:55 (20820): Guest Log:  *** Starting ATLAS job. (PandaID=6584890693 taskID=44004367) ***
2025-04-03 00:18:35 (20820): Status Report: Elapsed Time: '6000.000000'
2025-04-03 00:18:35 (20820): Status Report: CPU Time: '5761.437500'
2025-04-03 01:58:37 (20820): Status Report: Elapsed Time: '12000.000000'
2025-04-03 01:58:37 (20820): Status Report: CPU Time: '11740.906250'
2025-04-03 03:38:40 (20820): Status Report: Elapsed Time: '18000.000000'
2025-04-03 03:38:40 (20820): Status Report: CPU Time: '17720.609375'
2025-04-03 05:04:54 (20820): Guest Log:  *** Job finished ***
2025-04-03 05:04:54 (20820): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:35,812 | INFO     | [payload] validate_post thread has finished
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:35,835 | INFO     | [data] copytool_in thread has finished
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:38,353 | INFO     | [data] queue_monitor thread has finished
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:38,607 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140081659086656)>', '<ExcThread(monitor, started 140081079768832)>']
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:39,385 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:39,385 | INFO     | [monitor] control thread has ended
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:43,612 | INFO     | all workflow threads have been joined
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:43,612 | INFO     | end of generic workflow (traces error code: 0)
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:43,613 | INFO     | traces error code: 0
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:43,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:43,681 [wrapper] ==== pilot stdout END ====
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:43,683 [wrapper] ==== wrapper stdout RESUME ====
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:43,684 [wrapper] pilotpid: 5766
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:43,685 [wrapper] Pilot exit status: 0
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:43,693 [wrapper] pandaids: 6584890693
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:43,703 [wrapper] cleanup supervisor_pilot 32220 5767
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:43,704 [wrapper] Test setup, not cleaning
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:43,705 [wrapper] apfmon messages muted
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:43,707 [wrapper] ==== wrapper stdout END ====
2025-04-03 05:04:54 (20820): Guest Log: 2025-04-03 03:04:43,708 [wrapper] ==== wrapper stderr END ====
2025-04-03 05:04:54 (20820): Guest Log:  *** Error codes and diagnostics ***
2025-04-03 05:04:54 (20820): Guest Log:     "exeErrorCode": 0,
2025-04-03 05:04:54 (20820): Guest Log:     "exeErrorDiag": "",
2025-04-03 05:04:54 (20820): Guest Log:     "pilotErrorCode": 0,
2025-04-03 05:04:54 (20820): Guest Log:     "pilotErrorDiag": "",
2025-04-03 05:04:54 (20820): Guest Log:  *** Listing of results directory ***
2025-04-03 05:04:54 (20820): Guest Log: total 197360
2025-04-03 05:04:54 (20820): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Apr  2 16:26 pilot3.tar.gz
2025-04-03 05:04:54 (20820): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Apr  2 16:29 queuedata.json
2025-04-03 05:04:54 (20820): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  2 16:29 runpilot2-wrapper.sh
2025-04-03 05:04:54 (20820): Guest Log: -rwxr-xr-x. 1 atlas atlas      9321 Apr  2 20:38 init_data.xml
2025-04-03 05:04:54 (20820): Guest Log: -rwxr-xr-x. 1 atlas atlas    507234 Apr  2 20:38 input.tar.gz
2025-04-03 05:04:54 (20820): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  2 20:38 start_atlas.sh
2025-04-03 05:04:54 (20820): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  2 20:38 EVNT.44004365._000084.pool.root.1 -> /data/./ATLAS.root_0
2025-04-03 05:04:54 (20820): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Apr  2 20:38 pandaJob.out
2025-04-03 05:04:54 (20820): Guest Log: -rw-------. 1 atlas atlas       460 Apr  2 20:38 setup.sh.local
2025-04-03 05:04:54 (20820): Guest Log: -rw-------. 1 atlas atlas    991556 Apr  2 20:39 agis_schedconf.cvmfs.json
2025-04-03 05:04:54 (20820): Guest Log: drwx------. 4 atlas atlas      4096 Apr  2 20:39 pilot3
2025-04-03 05:04:54 (20820): Guest Log: -rw-------. 1 atlas atlas        95 Apr  3 03:03 pilot_heartbeat.json
2025-04-03 05:04:54 (20820): Guest Log: -rw-------. 1 atlas atlas 192268821 Apr  3 03:04 HITS.44004367._002087.pool.root.1
2025-04-03 05:04:54 (20820): Guest Log: -rw-------. 1 atlas atlas      1026 Apr  3 03:04 memory_monitor_summary.json
2025-04-03 05:04:54 (20820): Guest Log: -rw-------. 1 atlas atlas   1603449 Apr  3 03:04 agis_ddmendpoints.agis.ALL.json
2025-04-03 05:04:54 (20820): Guest Log: -rw-------. 1 atlas atlas    403489 Apr  3 03:04 log.44004367._002087.job.log.tgz.1
2025-04-03 05:04:54 (20820): Guest Log: -rw-------. 1 atlas atlas      7674 Apr  3 03:04 heartbeat.json
2025-04-03 05:04:54 (20820): Guest Log: -rw-------. 1 atlas atlas      4402 Apr  3 03:04 pilotlog.txt
2025-04-03 05:04:54 (20820): Guest Log: -rw-------. 1 atlas atlas   2623229 Apr  3 03:04 log.44004367._002087.job.log.1
2025-04-03 05:04:54 (20820): Guest Log: -rw-------. 1 atlas atlas       357 Apr  3 03:04 output.list
2025-04-03 05:04:54 (20820): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  3 03:04 runtime_log
2025-04-03 05:04:54 (20820): Guest Log: -rw-------. 1 atlas atlas   3041280 Apr  3 03:04 result.tar.gz
2025-04-03 05:04:54 (20820): Guest Log: -rw-------. 1 atlas atlas       658 Apr  3 03:04 X1WNDmU9FK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm6CsKDmqKpYOo.diag
2025-04-03 05:04:54 (20820): Guest Log: -rw-r--r--. 1 atlas atlas     11175 Apr  3 03:04 runtime_log.err
2025-04-03 05:04:54 (20820): Guest Log: Looking for outputfile HITS.44004367._002087.pool.root.1
2025-04-03 05:04:54 (20820): Guest Log: HITS file was successfully produced
2025-04-03 05:04:54 (20820): Guest Log: -rw-------. 1 atlas atlas 192268821 Apr  3 03:04 /home/atlas/RunAtlas/HITS.44004367._002087.pool.root.1
2025-04-03 05:04:54 (20820): Guest Log: Successfully finished the ATLAS job!
2025-04-03 05:04:54 (20820): Guest Log: Copying the results back to the shared directory!
2025-04-03 05:04:54 (20820): Guest Log:  *** Contents of shared directory: ***
2025-04-03 05:04:54 (20820): Guest Log: total 408120
2025-04-03 05:04:54 (20820): Guest Log: -rwxrwxrwx. 1 root root 222059380 Apr  2 20:38 ATLAS.root_0
2025-04-03 05:04:54 (20820): Guest Log: -rwxrwxrwx. 1 root root 192268821 Apr  3  2025 HITS.pool.root.1
2025-04-03 05:04:54 (20820): Guest Log: -rwxrwxrwx. 1 root root      9321 Apr  2 20:38 init_data.xml
2025-04-03 05:04:54 (20820): Guest Log: -rwxrwxrwx. 1 root root    507234 Apr  2 20:38 input.tar.gz
2025-04-03 05:04:54 (20820): Guest Log: -rwxrwxrwx. 1 root root   3041280 Apr  3  2025 result.tar.gz
2025-04-03 05:04:54 (20820): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  2 20:38 start_atlas.sh
2025-04-03 05:04:54 (20820): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-03 05:04:54 (20820): VM Completion File Detected.
2025-04-03 05:04:54 (20820): Powering off VM.
2025-04-03 05:04:54 (20820): Successfully stopped VM.
2025-04-03 05:04:54 (20820): Deregistering VM. (boinc_612388c4a49baa84, slot#20)
2025-04-03 05:04:54 (20820): Removing network bandwidth throttle group from VM.
2025-04-03 05:04:54 (20820): Removing VM from VirtualBox.
05:05:00 (20820): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN