Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-02 22:42:42 (9056): Detected: vboxwrapper 26206
2025-04-02 22:42:42 (9056): Detected: BOINC client v8.0.4
2025-04-02 22:42:43 (9056): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-02 22:42:43 (9056): Successfully copied 'init_data.xml' to the shared directory.
2025-04-02 22:42:44 (9056): Create VM. (boinc_6bfeff4c1c45db50, slot#27)
2025-04-02 22:42:44 (9056): Setting Memory Size for VM. (4096MB)
2025-04-02 22:42:44 (9056): Setting CPU Count for VM. (1)
2025-04-02 22:42:45 (9056): Setting Chipset Options for VM.
2025-04-02 22:42:45 (9056): Setting Graphics Controller Options for VM.
2025-04-02 22:42:45 (9056): Setting Boot Options for VM.
2025-04-02 22:42:45 (9056): Setting Network Configuration for NAT.
2025-04-02 22:42:46 (9056): Enabling VM Network Access.
2025-04-02 22:42:46 (9056): Disabling USB Support for VM.
2025-04-02 22:42:46 (9056): Disabling COM Port Support for VM.
2025-04-02 22:42:46 (9056): Disabling LPT Port Support for VM.
2025-04-02 22:42:47 (9056): Disabling Audio Support for VM.
2025-04-02 22:42:47 (9056): Disabling Clipboard Support for VM.
2025-04-02 22:42:47 (9056): Disabling Drag and Drop Support for VM.
2025-04-02 22:42:47 (9056): Adding storage controller(s) to VM.
2025-04-02 22:42:48 (9056): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-02 22:42:48 (9056): Adding VirtualBox Guest Additions to VM.
2025-04-02 22:42:48 (9056): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-02 22:42:49 (9056): forwarding host port 62308 to guest port 80
2025-04-02 22:42:49 (9056): Enabling remote desktop for VM.
2025-04-02 22:42:49 (9056): Required extension pack not installed, remote desktop not enabled.
2025-04-02 22:42:49 (9056): Enabling shared directory for VM.
2025-04-02 22:42:50 (9056): Starting VM using VBoxManage interface. (boinc_6bfeff4c1c45db50, slot#27)
2025-04-02 22:42:54 (9056): Successfully started VM. (PID = '30144')
2025-04-02 22:42:54 (9056): Reporting VM Process ID to BOINC.
2025-04-02 22:42:54 (9056): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-02 22:42:54 (9056): Guest Log: CPUID EDX: 0x178bfbff
2025-04-02 22:42:54 (9056): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-02 22:42:54 (9056): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-02 22:42:54 (9056): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-02 22:42:54 (9056): Detected: Web Application Enabled (http://localhost:62308)
2025-04-02 22:42:54 (9056): Preference change detected
2025-04-02 22:42:54 (9056): Setting CPU throttle for VM. (100%)
2025-04-02 22:42:54 (9056): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-02 22:42:56 (9056): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-02 22:42:56 (9056): Guest Log: BIOS: Booting from Hard Disk...
2025-04-02 22:42:58 (9056): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-02 22:42:58 (9056): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-02 22:42:58 (9056): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-02 22:43:01 (9056): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-02 22:43:01 (9056): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-02 22:43:05 (9056): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-02 22:43:05 (9056): Guest Log: 00:00:00.000073 main     Log opened 2025-04-02T22:43:03.563747000Z
2025-04-02 22:43:05 (9056): Guest Log: 00:00:00.000169 main     OS Product: Linux
2025-04-02 22:43:05 (9056): Guest Log: 00:00:00.000183 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-02 22:43:05 (9056): Guest Log: 00:00:00.000194 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-02 22:43:05 (9056): Guest Log: 00:00:00.000205 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-02 22:43:05 (9056): Guest Log: 00:00:00.000205 main     Process ID: 1242
2025-04-02 22:43:05 (9056): Guest Log: 00:00:00.000205 main     Package type: LINUX_64BITS_GENERIC
2025-04-02 22:43:05 (9056): Guest Log: 00:00:00.000748 main     5.2.32 r132073 started. Verbose level = 0
2025-04-02 22:43:05 (9056): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-02 22:43:05 (9056): Guest Log: [INFO] Mounting shared directory
2025-04-02 22:43:05 (9056): Guest Log: [INFO] Checking for init_data.xml
2025-04-02 22:43:08 (9056): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-02 22:43:08 (9056): Guest Log: [INFO] Detected branch: prod
2025-04-02 22:43:08 (9056): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-02 22:43:08 (9056): Guest Log: Copying input files
2025-04-02 22:43:08 (9056): Guest Log: Copied input files into RunAtlas.
2025-04-02 22:43:09 (9056): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-04-02 22:43:15 (9056): Guest Log: 00:00:10.007576 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 867 390 000ns (GuestNow=1 743 626 594 703 421 000 ns GuestLast=1 743 633 783 570 811 000 ns fSetTimeLastLoop=true )
2025-04-02 22:43:15 (9056): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-02 22:43:15 (9056): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-02 22:43:15 (9056): Guest Log: 2.6.3.0 1513 0 29504 144420 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-04-02 22:43:15 (9056): Guest Log: copied the webapp to /var/www
2025-04-02 22:43:15 (9056): Guest Log: core_number=1
2025-04-02 22:43:15 (9056): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-02 22:43:16 (9056): Guest Log:  *** Starting ATLAS job. (PandaID=6584049965 taskID=43634898) ***
2025-04-03 00:22:56 (9056): Status Report: Elapsed Time: '6000.000000'
2025-04-03 00:22:56 (9056): Status Report: CPU Time: '5788.546875'
2025-04-03 02:02:59 (9056): Status Report: Elapsed Time: '12000.000000'
2025-04-03 02:02:59 (9056): Status Report: CPU Time: '11767.500000'
2025-04-03 03:43:01 (9056): Status Report: Elapsed Time: '18000.000000'
2025-04-03 03:43:01 (9056): Status Report: CPU Time: '17746.265625'
2025-04-03 05:23:04 (9056): Status Report: Elapsed Time: '24000.000000'
2025-04-03 05:23:04 (9056): Status Report: CPU Time: '23720.953125'
2025-04-03 07:03:06 (9056): Status Report: Elapsed Time: '30000.000000'
2025-04-03 07:03:06 (9056): Status Report: CPU Time: '29700.187500'
2025-04-03 08:43:09 (9056): Status Report: Elapsed Time: '36000.000000'
2025-04-03 08:43:09 (9056): Status Report: CPU Time: '35678.343750'
2025-04-03 10:22:34 (9056): Guest Log:  *** Job finished ***
2025-04-03 10:22:34 (9056): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:09,626 | INFO     | [payload] validate_post thread has finished
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:10,058 | INFO     | [data] copytool_out thread has finished
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:12,892 | INFO     | [data] queue_monitor thread has finished
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:13,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139999305090880)>', '<ExcThread(monitor, started 139998854625024)>']
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:14,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:14,365 | INFO     | [monitor] control thread has ended
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:18,576 | INFO     | all workflow threads have been joined
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:18,576 | INFO     | end of generic workflow (traces error code: 0)
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:18,576 | INFO     | traces error code: 0
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:18,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:18,652 [wrapper] ==== pilot stdout END ====
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:18,653 [wrapper] ==== wrapper stdout RESUME ====
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:18,655 [wrapper] pilotpid: 5766
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:18,656 [wrapper] Pilot exit status: 0
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:18,664 [wrapper] pandaids: 6584049965
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:18,674 [wrapper] cleanup supervisor_pilot 31830 5767
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:18,675 [wrapper] Test setup, not cleaning
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:18,677 [wrapper] apfmon messages muted
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:18,678 [wrapper] ==== wrapper stdout END ====
2025-04-03 10:22:34 (9056): Guest Log: 2025-04-03 08:22:18,680 [wrapper] ==== wrapper stderr END ====
2025-04-03 10:22:34 (9056): Guest Log:  *** Error codes and diagnostics ***
2025-04-03 10:22:34 (9056): Guest Log:     "exeErrorCode": 0,
2025-04-03 10:22:34 (9056): Guest Log:     "exeErrorDiag": "",
2025-04-03 10:22:34 (9056): Guest Log:     "pilotErrorCode": 0,
2025-04-03 10:22:34 (9056): Guest Log:     "pilotErrorDiag": "",
2025-04-03 10:22:34 (9056): Guest Log:  *** Listing of results directory ***
2025-04-03 10:22:34 (9056): Guest Log: total 331980
2025-04-03 10:22:34 (9056): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Apr  2 06:39 pilot3.tar.gz
2025-04-03 10:22:34 (9056): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  2 07:02 runpilot2-wrapper.sh
2025-04-03 10:22:34 (9056): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Apr  2 07:02 queuedata.json
2025-04-03 10:22:34 (9056): Guest Log: -rwxr-xr-x. 1 atlas atlas      9321 Apr  2 20:43 init_data.xml
2025-04-03 10:22:34 (9056): Guest Log: -rwxr-xr-x. 1 atlas atlas    507245 Apr  2 20:43 input.tar.gz
2025-04-03 10:22:34 (9056): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  2 20:43 start_atlas.sh
2025-04-03 10:22:34 (9056): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  2 20:43 EVNT.43634896._000383.pool.root.1 -> /data/./ATLAS.root_0
2025-04-03 10:22:34 (9056): Guest Log: -rw-r--r--. 1 atlas atlas      2598 Apr  2 20:43 pandaJob.out
2025-04-03 10:22:34 (9056): Guest Log: -rw-------. 1 atlas atlas       460 Apr  2 20:43 setup.sh.local
2025-04-03 10:22:34 (9056): Guest Log: -rw-------. 1 atlas atlas    991556 Apr  2 20:43 agis_schedconf.cvmfs.json
2025-04-03 10:22:34 (9056): Guest Log: drwx------. 4 atlas atlas      4096 Apr  2 20:43 pilot3
2025-04-03 10:22:34 (9056): Guest Log: -rw-------. 1 atlas atlas        95 Apr  3 08:21 pilot_heartbeat.json
2025-04-03 10:22:34 (9056): Guest Log: -rw-------. 1 atlas atlas 325060324 Apr  3 08:21 HITS.43634898._012258.pool.root.1
2025-04-03 10:22:34 (9056): Guest Log: -rw-------. 1 atlas atlas      1021 Apr  3 08:21 memory_monitor_summary.json
2025-04-03 10:22:34 (9056): Guest Log: -rw-------. 1 atlas atlas   1603450 Apr  3 08:22 agis_ddmendpoints.agis.ALL.json
2025-04-03 10:22:34 (9056): Guest Log: -rw-------. 1 atlas atlas    607973 Apr  3 08:22 log.43634898._012258.job.log.tgz.1
2025-04-03 10:22:34 (9056): Guest Log: -rw-------. 1 atlas atlas      7669 Apr  3 08:22 heartbeat.json
2025-04-03 10:22:34 (9056): Guest Log: -rw-------. 1 atlas atlas      4402 Apr  3 08:22 pilotlog.txt
2025-04-03 10:22:34 (9056): Guest Log: -rw-------. 1 atlas atlas   4948529 Apr  3 08:22 log.43634898._012258.job.log.1
2025-04-03 10:22:34 (9056): Guest Log: -rw-------. 1 atlas atlas       357 Apr  3 08:22 output.list
2025-04-03 10:22:34 (9056): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  3 08:22 runtime_log
2025-04-03 10:22:34 (9056): Guest Log: -rw-------. 1 atlas atlas   5570560 Apr  3 08:22 result.tar.gz
2025-04-03 10:22:34 (9056): Guest Log: -rw-r--r--. 1 atlas atlas     11175 Apr  3 08:22 runtime_log.err
2025-04-03 10:22:34 (9056): Guest Log: -rw-------. 1 atlas atlas       659 Apr  3 08:22 O3ONDmII7J7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmIorKDmp43zFn.diag
2025-04-03 10:22:34 (9056): Guest Log: Looking for outputfile HITS.43634898._012258.pool.root.1
2025-04-03 10:22:34 (9056): Guest Log: HITS file was successfully produced
2025-04-03 10:22:34 (9056): Guest Log: -rw-------. 1 atlas atlas 325060324 Apr  3 08:21 /home/atlas/RunAtlas/HITS.43634898._012258.pool.root.1
2025-04-03 10:22:34 (9056): Guest Log: Successfully finished the ATLAS job!
2025-04-03 10:22:34 (9056): Guest Log: Copying the results back to the shared directory!
2025-04-03 10:22:34 (9056): Guest Log:  *** Contents of shared directory: ***
2025-04-03 10:22:34 (9056): Guest Log: total 674608
2025-04-03 10:22:34 (9056): Guest Log: -rwxrwxrwx. 1 root root 359622543 Apr  2 20:42 ATLAS.root_0
2025-04-03 10:22:34 (9056): Guest Log: -rwxrwxrwx. 1 root root 325060324 Apr  3  2025 HITS.pool.root.1
2025-04-03 10:22:34 (9056): Guest Log: -rwxrwxrwx. 1 root root      9321 Apr  2 20:42 init_data.xml
2025-04-03 10:22:34 (9056): Guest Log: -rwxrwxrwx. 1 root root    507245 Apr  2 20:42 input.tar.gz
2025-04-03 10:22:34 (9056): Guest Log: -rwxrwxrwx. 1 root root   5570560 Apr  3  2025 result.tar.gz
2025-04-03 10:22:34 (9056): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  2 20:42 start_atlas.sh
2025-04-03 10:22:35 (9056): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-03 10:22:35 (9056): VM Completion File Detected.
2025-04-03 10:22:35 (9056): Powering off VM.
2025-04-03 10:22:36 (9056): Successfully stopped VM.
2025-04-03 10:22:36 (9056): Deregistering VM. (boinc_6bfeff4c1c45db50, slot#27)
2025-04-03 10:22:36 (9056): Removing network bandwidth throttle group from VM.
2025-04-03 10:22:36 (9056): Removing VM from VirtualBox.
10:22:41 (9056): called boinc_finish(0)

</stderr_txt>
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