Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-02 22:33:10 (11528): Detected: vboxwrapper 26206
2025-04-02 22:33:10 (11528): Detected: BOINC client v8.0.4
2025-04-02 22:33:10 (11528): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-02 22:33:11 (11528): Successfully copied 'init_data.xml' to the shared directory.
2025-04-02 22:33:11 (11528): Create VM. (boinc_78ef0b379396f02b, slot#12)
2025-04-02 22:33:12 (11528): Setting Memory Size for VM. (4096MB)
2025-04-02 22:33:12 (11528): Setting CPU Count for VM. (1)
2025-04-02 22:33:12 (11528): Setting Chipset Options for VM.
2025-04-02 22:33:13 (11528): Setting Graphics Controller Options for VM.
2025-04-02 22:33:13 (11528): Setting Boot Options for VM.
2025-04-02 22:33:13 (11528): Setting Network Configuration for NAT.
2025-04-02 22:33:13 (11528): Enabling VM Network Access.
2025-04-02 22:33:14 (11528): Disabling USB Support for VM.
2025-04-02 22:33:14 (11528): Disabling COM Port Support for VM.
2025-04-02 22:33:14 (11528): Disabling LPT Port Support for VM.
2025-04-02 22:33:14 (11528): Disabling Audio Support for VM.
2025-04-02 22:33:15 (11528): Disabling Clipboard Support for VM.
2025-04-02 22:33:15 (11528): Disabling Drag and Drop Support for VM.
2025-04-02 22:33:15 (11528): Adding storage controller(s) to VM.
2025-04-02 22:33:15 (11528): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-02 22:33:16 (11528): Adding VirtualBox Guest Additions to VM.
2025-04-02 22:33:16 (11528): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-02 22:33:16 (11528): forwarding host port 60989 to guest port 80
2025-04-02 22:33:17 (11528): Enabling remote desktop for VM.
2025-04-02 22:33:17 (11528): Required extension pack not installed, remote desktop not enabled.
2025-04-02 22:33:17 (11528): Enabling shared directory for VM.
2025-04-02 22:33:17 (11528): Starting VM using VBoxManage interface. (boinc_78ef0b379396f02b, slot#12)
2025-04-02 22:33:21 (11528): Successfully started VM. (PID = '37172')
2025-04-02 22:33:21 (11528): Reporting VM Process ID to BOINC.
2025-04-02 22:33:21 (11528): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-02 22:33:21 (11528): Guest Log: CPUID EDX: 0x178bfbff
2025-04-02 22:33:21 (11528): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-02 22:33:21 (11528): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-02 22:33:21 (11528): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-02 22:33:21 (11528): Detected: Web Application Enabled (http://localhost:60989)
2025-04-02 22:33:21 (11528): Preference change detected
2025-04-02 22:33:21 (11528): Setting CPU throttle for VM. (100%)
2025-04-02 22:33:22 (11528): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-02 22:33:23 (11528): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-02 22:33:23 (11528): Guest Log: BIOS: Booting from Hard Disk...
2025-04-02 22:33:25 (11528): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-02 22:33:25 (11528): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-02 22:33:25 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-02 22:33:25 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-02 22:33:25 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-02 22:33:25 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-02 22:33:25 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-02 22:33:25 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-02 22:33:25 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-02 22:33:25 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-02 22:33:25 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-02 22:33:25 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-02 22:33:25 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-02 22:33:25 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-02 22:33:25 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-02 22:33:25 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-02 22:33:26 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-02 22:33:26 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-02 22:33:26 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-02 22:33:26 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-02 22:33:26 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-02 22:33:26 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-02 22:33:26 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-02 22:33:26 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-02 22:33:26 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-02 22:33:26 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-02 22:33:26 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-02 22:33:26 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-02 22:33:26 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-02 22:33:26 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-02 22:33:26 (11528): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-02 22:33:26 (11528): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-02 22:33:28 (11528): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-02 22:33:28 (11528): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-02 22:33:32 (11528): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-02 22:33:32 (11528): Guest Log: 00:00:00.000057 main     Log opened 2025-04-02T22:33:30.592929000Z
2025-04-02 22:33:32 (11528): Guest Log: 00:00:00.000136 main     OS Product: Linux
2025-04-02 22:33:32 (11528): Guest Log: 00:00:00.000150 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-02 22:33:32 (11528): Guest Log: 00:00:00.000161 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-02 22:33:32 (11528): Guest Log: 00:00:00.000171 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-02 22:33:32 (11528): Guest Log: 00:00:00.000172 main     Process ID: 1243
2025-04-02 22:33:32 (11528): Guest Log: 00:00:00.000172 main     Package type: LINUX_64BITS_GENERIC
2025-04-02 22:33:32 (11528): Guest Log: 00:00:00.000738 main     5.2.32 r132073 started. Verbose level = 0
2025-04-02 22:33:32 (11528): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-02 22:33:32 (11528): Guest Log: [INFO] Mounting shared directory
2025-04-02 22:33:32 (11528): Guest Log: [INFO] Checking for init_data.xml
2025-04-02 22:33:33 (11528): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-02 22:33:33 (11528): Guest Log: [INFO] Detected branch: prod
2025-04-02 22:33:34 (11528): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-02 22:33:34 (11528): Guest Log: Copying input files
2025-04-02 22:33:34 (11528): Guest Log: Copied input files into RunAtlas.
2025-04-02 22:33:34 (11528): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-04-02 22:33:42 (11528): Guest Log: 00:00:10.007630 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 119 118 000ns (GuestNow=1 743 626 022 480 673 000 ns GuestLast=1 743 633 210 599 791 000 ns fSetTimeLastLoop=true )
2025-04-02 22:33:43 (11528): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-02 22:33:43 (11528): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-02 22:33:44 (11528): Guest Log: 2.6.3.0 1513 0 29528 144420 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-04-02 22:33:44 (11528): Guest Log: copied the webapp to /var/www
2025-04-02 22:33:44 (11528): Guest Log: core_number=1
2025-04-02 22:33:44 (11528): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-02 22:33:44 (11528): Guest Log:  *** Starting ATLAS job. (PandaID=6584890602 taskID=44004367) ***
2025-04-03 00:13:24 (11528): Status Report: Elapsed Time: '6000.000000'
2025-04-03 00:13:24 (11528): Status Report: CPU Time: '5780.437500'
2025-04-03 01:53:26 (11528): Status Report: Elapsed Time: '12000.000000'
2025-04-03 01:53:26 (11528): Status Report: CPU Time: '11753.375000'
2025-04-03 03:33:29 (11528): Status Report: Elapsed Time: '18000.000000'
2025-04-03 03:33:29 (11528): Status Report: CPU Time: '17726.093750'
2025-04-03 05:01:34 (11528): Guest Log:  *** Job finished ***
2025-04-03 05:01:34 (11528): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:12,293 | INFO     | [data] queue_monitor thread has finished
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:16,929 | INFO     | job.realtimelogging is not enabled
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:17,930 | INFO     | [payload] run_realtimelog thread has finished
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:19,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139809849415488)>', '<ExcThread(monitor, started 139809406301952)>']
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:19,840 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:19,840 | INFO     | [monitor] control thread has ended
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:24,007 | INFO     | all workflow threads have been joined
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:24,007 | INFO     | end of generic workflow (traces error code: 0)
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:24,007 | INFO     | traces error code: 0
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:24,007 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:24,082 [wrapper] ==== pilot stdout END ====
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:24,083 [wrapper] ==== wrapper stdout RESUME ====
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:24,085 [wrapper] pilotpid: 5765
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:24,086 [wrapper] Pilot exit status: 0
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:24,098 [wrapper] pandaids: 6584890602
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:24,108 [wrapper] cleanup supervisor_pilot 32192 5766
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:24,110 [wrapper] Test setup, not cleaning
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:24,111 [wrapper] apfmon messages muted
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:24,113 [wrapper] ==== wrapper stdout END ====
2025-04-03 05:01:34 (11528): Guest Log: 2025-04-03 03:01:24,114 [wrapper] ==== wrapper stderr END ====
2025-04-03 05:01:34 (11528): Guest Log:  *** Error codes and diagnostics ***
2025-04-03 05:01:34 (11528): Guest Log:     "exeErrorCode": 0,
2025-04-03 05:01:34 (11528): Guest Log:     "exeErrorDiag": "",
2025-04-03 05:01:34 (11528): Guest Log:     "pilotErrorCode": 0,
2025-04-03 05:01:34 (11528): Guest Log:     "pilotErrorDiag": "",
2025-04-03 05:01:34 (11528): Guest Log:  *** Listing of results directory ***
2025-04-03 05:01:34 (11528): Guest Log: total 195756
2025-04-03 05:01:34 (11528): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Apr  2 15:24 pilot3.tar.gz
2025-04-03 05:01:34 (11528): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Apr  2 16:05 queuedata.json
2025-04-03 05:01:34 (11528): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  2 16:07 runpilot2-wrapper.sh
2025-04-03 05:01:34 (11528): Guest Log: -rwxr-xr-x. 1 atlas atlas      9321 Apr  2 20:33 init_data.xml
2025-04-03 05:01:34 (11528): Guest Log: -rwxr-xr-x. 1 atlas atlas    507240 Apr  2 20:33 input.tar.gz
2025-04-03 05:01:34 (11528): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  2 20:33 start_atlas.sh
2025-04-03 05:01:34 (11528): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  2 20:33 EVNT.44004365._000080.pool.root.1 -> /data/./ATLAS.root_0
2025-04-03 05:01:34 (11528): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Apr  2 20:33 pandaJob.out
2025-04-03 05:01:34 (11528): Guest Log: -rw-------. 1 atlas atlas       460 Apr  2 20:33 setup.sh.local
2025-04-03 05:01:34 (11528): Guest Log: -rw-------. 1 atlas atlas    991556 Apr  2 20:33 agis_schedconf.cvmfs.json
2025-04-03 05:01:34 (11528): Guest Log: drwx------. 4 atlas atlas      4096 Apr  2 20:33 pilot3
2025-04-03 05:01:34 (11528): Guest Log: -rw-------. 1 atlas atlas        95 Apr  3 03:00 pilot_heartbeat.json
2025-04-03 05:01:34 (11528): Guest Log: -rw-------. 1 atlas atlas 190615003 Apr  3 03:00 HITS.44004367._001996.pool.root.1
2025-04-03 05:01:34 (11528): Guest Log: -rw-------. 1 atlas atlas      1035 Apr  3 03:00 memory_monitor_summary.json
2025-04-03 05:01:34 (11528): Guest Log: -rw-------. 1 atlas atlas   1603449 Apr  3 03:01 agis_ddmendpoints.agis.ALL.json
2025-04-03 05:01:34 (11528): Guest Log: -rw-------. 1 atlas atlas    414278 Apr  3 03:01 log.44004367._001996.job.log.tgz.1
2025-04-03 05:01:34 (11528): Guest Log: -rw-------. 1 atlas atlas      7669 Apr  3 03:01 heartbeat.json
2025-04-03 05:01:34 (11528): Guest Log: -rw-------. 1 atlas atlas      4351 Apr  3 03:01 pilotlog.txt
2025-04-03 05:01:34 (11528): Guest Log: -rw-------. 1 atlas atlas   2613544 Apr  3 03:01 log.44004367._001996.job.log.1
2025-04-03 05:01:34 (11528): Guest Log: -rw-------. 1 atlas atlas       357 Apr  3 03:01 output.list
2025-04-03 05:01:34 (11528): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  3 03:01 runtime_log
2025-04-03 05:01:34 (11528): Guest Log: -rw-------. 1 atlas atlas   3051520 Apr  3 03:01 result.tar.gz
2025-04-03 05:01:34 (11528): Guest Log: -rw-r--r--. 1 atlas atlas     11175 Apr  3 03:01 runtime_log.err
2025-04-03 05:01:34 (11528): Guest Log: -rw-------. 1 atlas atlas       658 Apr  3 03:01 0MLNDmLoFK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm6hFLDmdNnxgn.diag
2025-04-03 05:01:34 (11528): Guest Log: Looking for outputfile HITS.44004367._001996.pool.root.1
2025-04-03 05:01:34 (11528): Guest Log: HITS file was successfully produced
2025-04-03 05:01:34 (11528): Guest Log: -rw-------. 1 atlas atlas 190615003 Apr  3 03:00 /home/atlas/RunAtlas/HITS.44004367._001996.pool.root.1
2025-04-03 05:01:34 (11528): Guest Log: Successfully finished the ATLAS job!
2025-04-03 05:01:34 (11528): Guest Log: Copying the results back to the shared directory!
2025-04-03 05:01:34 (11528): Guest Log:  *** Contents of shared directory: ***
2025-04-03 05:01:34 (11528): Guest Log: total 406500
2025-04-03 05:01:34 (11528): Guest Log: -rwxrwxrwx. 1 root root 222046207 Apr  2 20:33 ATLAS.root_0
2025-04-03 05:01:34 (11528): Guest Log: -rwxrwxrwx. 1 root root 190615003 Apr  3  2025 HITS.pool.root.1
2025-04-03 05:01:34 (11528): Guest Log: -rwxrwxrwx. 1 root root      9321 Apr  2 20:33 init_data.xml
2025-04-03 05:01:34 (11528): Guest Log: -rwxrwxrwx. 1 root root    507240 Apr  2 20:32 input.tar.gz
2025-04-03 05:01:34 (11528): Guest Log: -rwxrwxrwx. 1 root root   3051520 Apr  3  2025 result.tar.gz
2025-04-03 05:01:34 (11528): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  2 20:32 start_atlas.sh
2025-04-03 05:01:34 (11528): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-03 05:01:34 (11528): VM Completion File Detected.
2025-04-03 05:01:34 (11528): Powering off VM.
2025-04-03 05:01:34 (11528): Successfully stopped VM.
2025-04-03 05:01:34 (11528): Deregistering VM. (boinc_78ef0b379396f02b, slot#12)
2025-04-03 05:01:34 (11528): Removing network bandwidth throttle group from VM.
2025-04-03 05:01:35 (11528): Removing VM from VirtualBox.
05:01:40 (11528): called boinc_finish(0)

</stderr_txt>
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