Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-02 22:40:35 (36824): Detected: vboxwrapper 26206
2025-04-02 22:40:35 (36824): Detected: BOINC client v8.0.4
2025-04-02 22:40:35 (36824): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-02 22:40:36 (36824): Successfully copied 'init_data.xml' to the shared directory.
2025-04-02 22:40:36 (36824): Create VM. (boinc_1f7325a8fb9b96da, slot#5)
2025-04-02 22:40:37 (36824): Setting Memory Size for VM. (4096MB)
2025-04-02 22:40:37 (36824): Setting CPU Count for VM. (1)
2025-04-02 22:40:37 (36824): Setting Chipset Options for VM.
2025-04-02 22:40:38 (36824): Setting Graphics Controller Options for VM.
2025-04-02 22:40:38 (36824): Setting Boot Options for VM.
2025-04-02 22:40:38 (36824): Setting Network Configuration for NAT.
2025-04-02 22:40:38 (36824): Enabling VM Network Access.
2025-04-02 22:40:39 (36824): Disabling USB Support for VM.
2025-04-02 22:40:39 (36824): Disabling COM Port Support for VM.
2025-04-02 22:40:39 (36824): Disabling LPT Port Support for VM.
2025-04-02 22:40:39 (36824): Disabling Audio Support for VM.
2025-04-02 22:40:40 (36824): Disabling Clipboard Support for VM.
2025-04-02 22:40:40 (36824): Disabling Drag and Drop Support for VM.
2025-04-02 22:40:40 (36824): Adding storage controller(s) to VM.
2025-04-02 22:40:40 (36824): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-02 22:40:41 (36824): Adding VirtualBox Guest Additions to VM.
2025-04-02 22:40:41 (36824): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-02 22:40:41 (36824): forwarding host port 61972 to guest port 80
2025-04-02 22:40:42 (36824): Enabling remote desktop for VM.
2025-04-02 22:40:42 (36824): Required extension pack not installed, remote desktop not enabled.
2025-04-02 22:40:42 (36824): Enabling shared directory for VM.
2025-04-02 22:40:42 (36824): Starting VM using VBoxManage interface. (boinc_1f7325a8fb9b96da, slot#5)
2025-04-02 22:40:46 (36824): Successfully started VM. (PID = '9576')
2025-04-02 22:40:46 (36824): Reporting VM Process ID to BOINC.
2025-04-02 22:40:46 (36824): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-02 22:40:46 (36824): Guest Log: CPUID EDX: 0x178bfbff
2025-04-02 22:40:46 (36824): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-02 22:40:46 (36824): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-02 22:40:46 (36824): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-02 22:40:46 (36824): Detected: Web Application Enabled (http://localhost:61972)
2025-04-02 22:40:46 (36824): Preference change detected
2025-04-02 22:40:46 (36824): Setting CPU throttle for VM. (100%)
2025-04-02 22:40:47 (36824): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-02 22:40:48 (36824): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-02 22:40:48 (36824): Guest Log: BIOS: Booting from Hard Disk...
2025-04-02 22:40:50 (36824): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-02 22:40:50 (36824): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-02 22:40:50 (36824): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-02 22:40:53 (36824): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-02 22:40:53 (36824): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-02 22:40:57 (36824): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-02 22:40:57 (36824): Guest Log: 00:00:00.000060 main     Log opened 2025-04-02T22:40:55.516893000Z
2025-04-02 22:40:57 (36824): Guest Log: 00:00:00.000138 main     OS Product: Linux
2025-04-02 22:40:57 (36824): Guest Log: 00:00:00.000153 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-02 22:40:57 (36824): Guest Log: 00:00:00.000164 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-02 22:40:57 (36824): Guest Log: 00:00:00.000174 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-02 22:40:57 (36824): Guest Log: 00:00:00.000175 main     Process ID: 1242
2025-04-02 22:40:57 (36824): Guest Log: 00:00:00.000175 main     Package type: LINUX_64BITS_GENERIC
2025-04-02 22:40:57 (36824): Guest Log: 00:00:00.000794 main     5.2.32 r132073 started. Verbose level = 0
2025-04-02 22:40:57 (36824): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-02 22:40:57 (36824): Guest Log: [INFO] Mounting shared directory
2025-04-02 22:40:57 (36824): Guest Log: [INFO] Checking for init_data.xml
2025-04-02 22:40:59 (36824): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-02 22:40:59 (36824): Guest Log: [INFO] Detected branch: prod
2025-04-02 22:40:59 (36824): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-02 22:40:59 (36824): Guest Log: Copying input files
2025-04-02 22:41:00 (36824): Guest Log: Copied input files into RunAtlas.
2025-04-02 22:41:00 (36824): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-04-02 22:41:06 (36824): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-02 22:41:06 (36824): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-02 22:41:06 (36824): Guest Log: 2.6.3.0 1513 0 31540 144420 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-04-02 22:41:06 (36824): Guest Log: copied the webapp to /var/www
2025-04-02 22:41:06 (36824): Guest Log: core_number=1
2025-04-02 22:41:06 (36824): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-02 22:41:06 (36824): Guest Log:  *** Starting ATLAS job. (PandaID=6584890593 taskID=44004367) ***
2025-04-02 22:41:07 (36824): Guest Log: 00:00:10.009310 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 231 208 000ns (GuestNow=1 743 626 467 292 952 000 ns GuestLast=1 743 633 655 524 160 000 ns fSetTimeLastLoop=true )
2025-04-03 00:20:49 (36824): Status Report: Elapsed Time: '6000.000000'
2025-04-03 00:20:49 (36824): Status Report: CPU Time: '5790.734375'
2025-04-03 02:00:51 (36824): Status Report: Elapsed Time: '12000.000000'
2025-04-03 02:00:51 (36824): Status Report: CPU Time: '11769.812500'
2025-04-03 03:40:54 (36824): Status Report: Elapsed Time: '18000.000000'
2025-04-03 03:40:54 (36824): Status Report: CPU Time: '17750.468750'
2025-04-03 05:06:37 (36824): Guest Log:  *** Job finished ***
2025-04-03 05:06:37 (36824): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:19,429 | INFO     | [data] copytool_out thread has finished
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:19,455 | INFO     | [payload] failed_post thread has finished
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:21,037 | INFO     | [data] queue_monitor thread has finished
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:22,438 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139836257756992)>', '<ExcThread(monitor, started 139835603937024)>']
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:23,126 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:23,126 | INFO     | [monitor] control thread has ended
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:27,443 | INFO     | all workflow threads have been joined
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:27,443 | INFO     | end of generic workflow (traces error code: 0)
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:27,444 | INFO     | traces error code: 0
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:27,444 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:27,506 [wrapper] ==== pilot stdout END ====
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:27,508 [wrapper] ==== wrapper stdout RESUME ====
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:27,509 [wrapper] pilotpid: 5779
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:27,510 [wrapper] Pilot exit status: 0
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:27,522 [wrapper] pandaids: 6584890593
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:27,530 [wrapper] cleanup supervisor_pilot 32192 5780
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:27,532 [wrapper] Test setup, not cleaning
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:27,533 [wrapper] apfmon messages muted
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:27,535 [wrapper] ==== wrapper stdout END ====
2025-04-03 05:06:37 (36824): Guest Log: 2025-04-03 03:06:27,536 [wrapper] ==== wrapper stderr END ====
2025-04-03 05:06:37 (36824): Guest Log:  *** Error codes and diagnostics ***
2025-04-03 05:06:37 (36824): Guest Log:     "exeErrorCode": 0,
2025-04-03 05:06:37 (36824): Guest Log:     "exeErrorDiag": "",
2025-04-03 05:06:37 (36824): Guest Log:     "pilotErrorCode": 0,
2025-04-03 05:06:37 (36824): Guest Log:     "pilotErrorDiag": "",
2025-04-03 05:06:37 (36824): Guest Log:  *** Listing of results directory ***
2025-04-03 05:06:37 (36824): Guest Log: total 195940
2025-04-03 05:06:37 (36824): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Apr  2 15:24 pilot3.tar.gz
2025-04-03 05:06:37 (36824): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  2 16:05 runpilot2-wrapper.sh
2025-04-03 05:06:37 (36824): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Apr  2 16:05 queuedata.json
2025-04-03 05:06:37 (36824): Guest Log: -rwxr-xr-x. 1 atlas atlas      9320 Apr  2 20:40 init_data.xml
2025-04-03 05:06:37 (36824): Guest Log: -rwxr-xr-x. 1 atlas atlas    507234 Apr  2 20:40 input.tar.gz
2025-04-03 05:06:37 (36824): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  2 20:40 start_atlas.sh
2025-04-03 05:06:37 (36824): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  2 20:40 EVNT.44004365._000080.pool.root.1 -> /data/./ATLAS.root_0
2025-04-03 05:06:37 (36824): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Apr  2 20:41 pandaJob.out
2025-04-03 05:06:37 (36824): Guest Log: -rw-------. 1 atlas atlas       460 Apr  2 20:41 setup.sh.local
2025-04-03 05:06:37 (36824): Guest Log: -rw-------. 1 atlas atlas    991556 Apr  2 20:41 agis_schedconf.cvmfs.json
2025-04-03 05:06:37 (36824): Guest Log: drwx------. 4 atlas atlas      4096 Apr  2 20:41 pilot3
2025-04-03 05:06:37 (36824): Guest Log: -rw-------. 1 atlas atlas 190559195 Apr  3 03:05 HITS.44004367._001987.pool.root.1
2025-04-03 05:06:37 (36824): Guest Log: -rw-------. 1 atlas atlas        95 Apr  3 03:05 pilot_heartbeat.json
2025-04-03 05:06:37 (36824): Guest Log: -rw-------. 1 atlas atlas      1036 Apr  3 03:06 memory_monitor_summary.json
2025-04-03 05:06:37 (36824): Guest Log: -rw-------. 1 atlas atlas   1603449 Apr  3 03:06 agis_ddmendpoints.agis.ALL.json
2025-04-03 05:06:37 (36824): Guest Log: -rw-------. 1 atlas atlas    409488 Apr  3 03:06 log.44004367._001987.job.log.tgz.1
2025-04-03 05:06:37 (36824): Guest Log: -rw-------. 1 atlas atlas      7670 Apr  3 03:06 heartbeat.json
2025-04-03 05:06:37 (36824): Guest Log: -rw-------. 1 atlas atlas      4781 Apr  3 03:06 pilotlog.txt
2025-04-03 05:06:37 (36824): Guest Log: -rw-------. 1 atlas atlas   2743620 Apr  3 03:06 log.44004367._001987.job.log.1
2025-04-03 05:06:37 (36824): Guest Log: -rw-------. 1 atlas atlas       357 Apr  3 03:06 output.list
2025-04-03 05:06:37 (36824): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  3 03:06 runtime_log
2025-04-03 05:06:37 (36824): Guest Log: -rw-------. 1 atlas atlas   3174400 Apr  3 03:06 result.tar.gz
2025-04-03 05:06:37 (36824): Guest Log: -rw-------. 1 atlas atlas       658 Apr  3 03:06 tQKNDmOmFK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQCsKDmCrPURn.diag
2025-04-03 05:06:37 (36824): Guest Log: -rw-r--r--. 1 atlas atlas     11175 Apr  3 03:06 runtime_log.err
2025-04-03 05:06:37 (36824): Guest Log: Looking for outputfile HITS.44004367._001987.pool.root.1
2025-04-03 05:06:37 (36824): Guest Log: HITS file was successfully produced
2025-04-03 05:06:37 (36824): Guest Log: -rw-------. 1 atlas atlas 190559195 Apr  3 03:05 /home/atlas/RunAtlas/HITS.44004367._001987.pool.root.1
2025-04-03 05:06:38 (36824): Guest Log: Successfully finished the ATLAS job!
2025-04-03 05:06:38 (36824): Guest Log: Copying the results back to the shared directory!
2025-04-03 05:06:38 (36824): Guest Log:  *** Contents of shared directory: ***
2025-04-03 05:06:38 (36824): Guest Log: total 406568
2025-04-03 05:06:38 (36824): Guest Log: -rwxrwxrwx. 1 root root 222046207 Apr  2 20:40 ATLAS.root_0
2025-04-03 05:06:38 (36824): Guest Log: -rwxrwxrwx. 1 root root 190559195 Apr  3  2025 HITS.pool.root.1
2025-04-03 05:06:38 (36824): Guest Log: -rwxrwxrwx. 1 root root      9320 Apr  2 20:40 init_data.xml
2025-04-03 05:06:38 (36824): Guest Log: -rwxrwxrwx. 1 root root    507234 Apr  2 20:40 input.tar.gz
2025-04-03 05:06:38 (36824): Guest Log: -rwxrwxrwx. 1 root root   3174400 Apr  3  2025 result.tar.gz
2025-04-03 05:06:38 (36824): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  2 20:40 start_atlas.sh
2025-04-03 05:06:38 (36824): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-03 05:06:38 (36824): VM Completion File Detected.
2025-04-03 05:06:38 (36824): Powering off VM.
2025-04-03 05:06:38 (36824): Successfully stopped VM.
2025-04-03 05:06:38 (36824): Deregistering VM. (boinc_1f7325a8fb9b96da, slot#5)
2025-04-03 05:06:38 (36824): Removing network bandwidth throttle group from VM.
2025-04-03 05:06:38 (36824): Removing VM from VirtualBox.
05:06:44 (36824): called boinc_finish(0)

</stderr_txt>
]]>

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