Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-02 22:38:12 (3552): Detected: vboxwrapper 26206
2025-04-02 22:38:12 (3552): Detected: BOINC client v8.0.4
2025-04-02 22:38:13 (3552): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-02 22:38:14 (3552): Successfully copied 'init_data.xml' to the shared directory.
2025-04-02 22:38:14 (3552): Create VM. (boinc_09f69e01708f641d, slot#4)
2025-04-02 22:38:15 (3552): Setting Memory Size for VM. (4096MB)
2025-04-02 22:38:15 (3552): Setting CPU Count for VM. (1)
2025-04-02 22:38:15 (3552): Setting Chipset Options for VM.
2025-04-02 22:38:15 (3552): Setting Graphics Controller Options for VM.
2025-04-02 22:38:16 (3552): Setting Boot Options for VM.
2025-04-02 22:38:16 (3552): Setting Network Configuration for NAT.
2025-04-02 22:38:16 (3552): Enabling VM Network Access.
2025-04-02 22:38:16 (3552): Disabling USB Support for VM.
2025-04-02 22:38:17 (3552): Disabling COM Port Support for VM.
2025-04-02 22:38:17 (3552): Disabling LPT Port Support for VM.
2025-04-02 22:38:17 (3552): Disabling Audio Support for VM.
2025-04-02 22:38:17 (3552): Disabling Clipboard Support for VM.
2025-04-02 22:38:18 (3552): Disabling Drag and Drop Support for VM.
2025-04-02 22:38:18 (3552): Adding storage controller(s) to VM.
2025-04-02 22:38:18 (3552): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-02 22:38:19 (3552): Adding VirtualBox Guest Additions to VM.
2025-04-02 22:38:19 (3552): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-02 22:38:19 (3552): forwarding host port 61670 to guest port 80
2025-04-02 22:38:19 (3552): Enabling remote desktop for VM.
2025-04-02 22:38:20 (3552): Required extension pack not installed, remote desktop not enabled.
2025-04-02 22:38:20 (3552): Enabling shared directory for VM.
2025-04-02 22:38:20 (3552): Starting VM using VBoxManage interface. (boinc_09f69e01708f641d, slot#4)
2025-04-02 22:38:24 (3552): Successfully started VM. (PID = '34204')
2025-04-02 22:38:24 (3552): Reporting VM Process ID to BOINC.
2025-04-02 22:38:24 (3552): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-02 22:38:24 (3552): Guest Log: CPUID EDX: 0x178bfbff
2025-04-02 22:38:24 (3552): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-02 22:38:24 (3552): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-02 22:38:24 (3552): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-02 22:38:24 (3552): Detected: Web Application Enabled (http://localhost:61670)
2025-04-02 22:38:24 (3552): Preference change detected
2025-04-02 22:38:24 (3552): Setting CPU throttle for VM. (100%)
2025-04-02 22:38:24 (3552): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-02 22:38:26 (3552): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-02 22:38:26 (3552): Guest Log: BIOS: Booting from Hard Disk...
2025-04-02 22:38:28 (3552): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-02 22:38:28 (3552): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-02 22:38:28 (3552): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-02 22:38:31 (3552): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-02 22:38:31 (3552): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-02 22:38:35 (3552): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-02 22:38:35 (3552): Guest Log: 00:00:00.000071 main     Log opened 2025-04-02T22:38:33.731235000Z
2025-04-02 22:38:35 (3552): Guest Log: 00:00:00.000135 main     OS Product: Linux
2025-04-02 22:38:35 (3552): Guest Log: 00:00:00.000149 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-02 22:38:35 (3552): Guest Log: 00:00:00.000160 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-02 22:38:35 (3552): Guest Log: 00:00:00.000171 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-02 22:38:35 (3552): Guest Log: 00:00:00.000171 main     Process ID: 1242
2025-04-02 22:38:35 (3552): Guest Log: 00:00:00.000171 main     Package type: LINUX_64BITS_GENERIC
2025-04-02 22:38:35 (3552): Guest Log: 00:00:00.000652 main     5.2.32 r132073 started. Verbose level = 0
2025-04-02 22:38:35 (3552): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-02 22:38:35 (3552): Guest Log: [INFO] Mounting shared directory
2025-04-02 22:38:35 (3552): Guest Log: [INFO] Checking for init_data.xml
2025-04-02 22:38:37 (3552): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-02 22:38:37 (3552): Guest Log: [INFO] Detected branch: prod
2025-04-02 22:38:37 (3552): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-02 22:38:37 (3552): Guest Log: Copying input files
2025-04-02 22:38:38 (3552): Guest Log: Copied input files into RunAtlas.
2025-04-02 22:38:38 (3552): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-04-02 22:38:45 (3552): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-02 22:38:45 (3552): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-02 22:38:45 (3552): Guest Log: 2.6.3.0 1513 0 31528 144420 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-04-02 22:38:45 (3552): Guest Log: 00:00:10.008105 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 485 041 000ns (GuestNow=1 743 626 325 254 105 000 ns GuestLast=1 743 633 513 739 146 000 ns fSetTimeLastLoop=true )
2025-04-02 22:38:45 (3552): Guest Log: copied the webapp to /var/www
2025-04-02 22:38:45 (3552): Guest Log: core_number=1
2025-04-02 22:38:45 (3552): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-02 22:38:45 (3552): Guest Log:  *** Starting ATLAS job. (PandaID=6581220795 taskID=43634882) ***
2025-04-03 00:18:27 (3552): Status Report: Elapsed Time: '6000.000000'
2025-04-03 00:18:27 (3552): Status Report: CPU Time: '5785.093750'
2025-04-03 01:58:29 (3552): Status Report: Elapsed Time: '12000.000000'
2025-04-03 01:58:29 (3552): Status Report: CPU Time: '11762.781250'
2025-04-03 03:38:32 (3552): Status Report: Elapsed Time: '18000.000000'
2025-04-03 03:38:32 (3552): Status Report: CPU Time: '17741.359375'
2025-04-03 05:18:34 (3552): Status Report: Elapsed Time: '24000.000000'
2025-04-03 05:18:34 (3552): Status Report: CPU Time: '23718.265625'
2025-04-03 06:58:37 (3552): Status Report: Elapsed Time: '30000.000000'
2025-04-03 06:58:37 (3552): Status Report: CPU Time: '29698.718750'
2025-04-03 08:38:39 (3552): Status Report: Elapsed Time: '36000.000000'
2025-04-03 08:38:39 (3552): Status Report: CPU Time: '35678.937500'
2025-04-03 09:52:30 (3552): Guest Log:  *** Job finished ***
2025-04-03 09:52:30 (3552): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:04,137 | INFO     | [data] queue_monitor thread has finished
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:07,290 | INFO     | job.realtimelogging is not enabled
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:08,292 | INFO     | [payload] run_realtimelog thread has finished
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:10,343 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139867971872576)>', '<ExcThread(monitor, started 139867522578176)>']
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:10,870 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:10,870 | INFO     | [monitor] control thread has ended
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:15,349 | INFO     | all workflow threads have been joined
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:15,349 | INFO     | end of generic workflow (traces error code: 0)
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:15,349 | INFO     | traces error code: 0
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:15,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:15,415 [wrapper] ==== pilot stdout END ====
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:15,417 [wrapper] ==== wrapper stdout RESUME ====
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:15,418 [wrapper] pilotpid: 5764
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:15,419 [wrapper] Pilot exit status: 0
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:15,436 [wrapper] pandaids: 6581220795
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:15,449 [wrapper] cleanup supervisor_pilot 28626 5765
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:15,451 [wrapper] Test setup, not cleaning
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:15,453 [wrapper] apfmon messages muted
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:15,454 [wrapper] ==== wrapper stdout END ====
2025-04-03 09:52:30 (3552): Guest Log: 2025-04-03 07:52:15,455 [wrapper] ==== wrapper stderr END ====
2025-04-03 09:52:30 (3552): Guest Log:  *** Error codes and diagnostics ***
2025-04-03 09:52:30 (3552): Guest Log:     "exeErrorCode": 0,
2025-04-03 09:52:30 (3552): Guest Log:     "exeErrorDiag": "",
2025-04-03 09:52:30 (3552): Guest Log:     "pilotErrorCode": 0,
2025-04-03 09:52:30 (3552): Guest Log:     "pilotErrorDiag": "",
2025-04-03 09:52:30 (3552): Guest Log:  *** Listing of results directory ***
2025-04-03 09:52:30 (3552): Guest Log: total 309716
2025-04-03 09:52:30 (3552): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Mar 31 12:09 pilot3.tar.gz
2025-04-03 09:52:30 (3552): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Mar 31 12:23 queuedata.json
2025-04-03 09:52:30 (3552): Guest Log: -rwx------. 1 atlas atlas     37140 Mar 31 12:23 runpilot2-wrapper.sh
2025-04-03 09:52:30 (3552): Guest Log: -rwxr-xr-x. 1 atlas atlas      9319 Apr  2 20:38 init_data.xml
2025-04-03 09:52:30 (3552): Guest Log: -rwxr-xr-x. 1 atlas atlas    507262 Apr  2 20:38 input.tar.gz
2025-04-03 09:52:30 (3552): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  2 20:38 start_atlas.sh
2025-04-03 09:52:30 (3552): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  2 20:38 EVNT.43634880._000646.pool.root.1 -> /data/./ATLAS.root_0
2025-04-03 09:52:30 (3552): Guest Log: -rw-r--r--. 1 atlas atlas      2618 Apr  2 20:38 pandaJob.out
2025-04-03 09:52:30 (3552): Guest Log: -rw-------. 1 atlas atlas       460 Apr  2 20:38 setup.sh.local
2025-04-03 09:52:30 (3552): Guest Log: -rw-------. 1 atlas atlas    991556 Apr  2 20:38 agis_schedconf.cvmfs.json
2025-04-03 09:52:30 (3552): Guest Log: drwx------. 4 atlas atlas      4096 Apr  2 20:38 pilot3
2025-04-03 09:52:30 (3552): Guest Log: -rw-------. 1 atlas atlas 302623210 Apr  3 07:51 HITS.43634882._004224.pool.root.1
2025-04-03 09:52:30 (3552): Guest Log: -rw-------. 1 atlas atlas        95 Apr  3 07:51 pilot_heartbeat.json
2025-04-03 09:52:30 (3552): Guest Log: -rw-------. 1 atlas atlas      1022 Apr  3 07:51 memory_monitor_summary.json
2025-04-03 09:52:30 (3552): Guest Log: -rw-------. 1 atlas atlas   1603449 Apr  3 07:51 agis_ddmendpoints.agis.ALL.json
2025-04-03 09:52:30 (3552): Guest Log: -rw-------. 1 atlas atlas    602032 Apr  3 07:51 log.43634882._004224.job.log.tgz.1
2025-04-03 09:52:30 (3552): Guest Log: -rw-------. 1 atlas atlas      7666 Apr  3 07:51 heartbeat.json
2025-04-03 09:52:30 (3552): Guest Log: -rw-------. 1 atlas atlas      4660 Apr  3 07:52 pilotlog.txt
2025-04-03 09:52:30 (3552): Guest Log: -rw-------. 1 atlas atlas   4771595 Apr  3 07:52 log.43634882._004224.job.log.1
2025-04-03 09:52:30 (3552): Guest Log: -rw-------. 1 atlas atlas       357 Apr  3 07:52 output.list
2025-04-03 09:52:30 (3552): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  3 07:52 runtime_log
2025-04-03 09:52:30 (3552): Guest Log: -rw-------. 1 atlas atlas   5396480 Apr  3 07:52 result.tar.gz
2025-04-03 09:52:30 (3552): Guest Log: -rw-------. 1 atlas atlas       658 Apr  3 07:52 VrVLDm1LTJ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmHRBLDmhLmEbm.diag
2025-04-03 09:52:30 (3552): Guest Log: -rw-r--r--. 1 atlas atlas     11175 Apr  3 07:52 runtime_log.err
2025-04-03 09:52:30 (3552): Guest Log: Looking for outputfile HITS.43634882._004224.pool.root.1
2025-04-03 09:52:30 (3552): Guest Log: HITS file was successfully produced
2025-04-03 09:52:30 (3552): Guest Log: -rw-------. 1 atlas atlas 302623210 Apr  3 07:51 /home/atlas/RunAtlas/HITS.43634882._004224.pool.root.1
2025-04-03 09:52:31 (3552): Guest Log: Successfully finished the ATLAS job!
2025-04-03 09:52:31 (3552): Guest Log: Copying the results back to the shared directory!
2025-04-03 09:52:31 (3552): Guest Log:  *** Contents of shared directory: ***
2025-04-03 09:52:31 (3552): Guest Log: total 640748
2025-04-03 09:52:31 (3552): Guest Log: -rwxrwxrwx. 1 root root 347559970 Apr  2 20:38 ATLAS.root_0
2025-04-03 09:52:31 (3552): Guest Log: -rwxrwxrwx. 1 root root 302623210 Apr  3  2025 HITS.pool.root.1
2025-04-03 09:52:31 (3552): Guest Log: -rwxrwxrwx. 1 root root      9319 Apr  2 20:38 init_data.xml
2025-04-03 09:52:31 (3552): Guest Log: -rwxrwxrwx. 1 root root    507262 Apr  2 20:37 input.tar.gz
2025-04-03 09:52:31 (3552): Guest Log: -rwxrwxrwx. 1 root root   5396480 Apr  3  2025 result.tar.gz
2025-04-03 09:52:31 (3552): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  2 20:37 start_atlas.sh
2025-04-03 09:52:31 (3552): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-03 09:52:31 (3552): VM Completion File Detected.
2025-04-03 09:52:31 (3552): Powering off VM.
2025-04-03 09:52:31 (3552): Successfully stopped VM.
2025-04-03 09:52:31 (3552): Deregistering VM. (boinc_09f69e01708f641d, slot#4)
2025-04-03 09:52:31 (3552): Removing network bandwidth throttle group from VM.
2025-04-03 09:52:31 (3552): Removing VM from VirtualBox.
09:52:37 (3552): called boinc_finish(0)

</stderr_txt>
]]>

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