Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
22:38:30 (982384): wrapper (7.7.26015): starting
22:38:30 (982384): wrapper: running run_atlas (--nthreads 4)
[2025-04-02 22:38:30] Arguments: --nthreads 4
[2025-04-02 22:38:30] Threads: 4
[2025-04-02 22:38:30] Checking for CVMFS
[2025-04-02 22:38:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-02 22:38:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-02 22:38:30] Running cvmfs_config stat atlas.cern.ch
[2025-04-02 22:38:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-02 22:38:31] 2.12.7.0 2561 583 106080 144420 1 56 3651142 4096000 6447 130560 0 3930341 99.999 80997 3848 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-02 22:38:31] CVMFS is ok
[2025-04-02 22:38:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-02 22:38:31] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-02 22:38:31] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-02 22:38:31] Further information can be found at the LHC@home message board.
[2025-04-02 22:38:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-02 22:38:31] Checking for apptainer binary...
[2025-04-02 22:38:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-02 22:38:31] Running /usr/bin/apptainer --version
[2025-04-02 22:38:31] apptainer version 1.2.3
[2025-04-02 22:38:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-02 22:38:31] Ryzen-9-7950X3D-Zen4-Deb12
[2025-04-02 22:38:31] apptainer works
[2025-04-02 22:38:31] Set ATHENA_PROC_NUMBER=4
[2025-04-02 22:38:31] Set ATHENA_CORE_NUMBER=4
[2025-04-02 22:38:31] Starting ATLAS job with PandaID=6584888380
[2025-04-02 22:38:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-02 23:57:33]  *** The last 200 lines of the pilot log: ***
[2025-04-02 23:57:33]  filetype=log
[2025-04-02 23:57:33]  guid=a56c177d-1a0d-47c1-b790-ec7fcc1e2e9b
[2025-04-02 23:57:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-02 23:57:33]  is_altstaged=None
[2025-04-02 23:57:33]  is_tar=False
[2025-04-02 23:57:33]  lfn=log.44004367._001560.job.log.tgz.1
[2025-04-02 23:57:33]  mtime=0
[2025-04-02 23:57:33]  protocol_id=None
[2025-04-02 23:57:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-02 23:57:33]  replicas=None
[2025-04-02 23:57:33]  scope=mc23_13p6TeV
[2025-04-02 23:57:33]  status=None
[2025-04-02 23:57:33]  status_code=0
[2025-04-02 23:57:33]  storage_token=
[2025-04-02 23:57:33]  surl=/var/lib/boinc-client/slots/6/PanDA_Pilot-6584888380/log.44004367._001560.job.log.tgz.1
[2025-04-02 23:57:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/1c/log.44004367._001560.job.log.tgz.1
[2025-04-02 23:57:33]  workdir=None
[2025-04-02 23:57:33] ]
[2025-04-02 23:57:33] 2025-04-02 21:57:15,958 | INFO     | transferring file log.44004367._001560.job.log.tgz.1 from /var/lib/boinc-client/slots/6/PanDA_Pilot-6584888380/log.44004367._001560.job.log.tgz.1 to /var/lib/boinc
[2025-04-02 23:57:33] 2025-04-02 21:57:15,958 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/6/PanDA_Pilot-6584888380/log.44004367._001560.job.log.tgz.1 /var/lib/boinc-client/slots/6/log.440043
[2025-04-02 23:57:33] 2025-04-02 21:57:15,968 | INFO     | adding to output.list: log.44004367._001560.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/1c/log.44004367._001560.job.log.tg
[2025-04-02 23:57:33] 2025-04-02 21:57:15,968 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-02 23:57:33] 2025-04-02 21:57:15,968 | INFO     | summary of transferred files:
[2025-04-02 23:57:33] 2025-04-02 21:57:15,968 | INFO     |  -- lfn=log.44004367._001560.job.log.tgz.1, status_code=0, status=transferred
[2025-04-02 23:57:33] 2025-04-02 21:57:15,969 | INFO     | stage-out finished correctly
[2025-04-02 23:57:33] 2025-04-02 21:57:17,188 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-02 23:57:33] 2025-04-02 21:57:17,234 | INFO     | job 6584888380 has state=finished
[2025-04-02 23:57:33] 2025-04-02 21:57:17,234 | INFO     | preparing for final server update for job 6584888380 in state='finished'
[2025-04-02 23:57:33] 2025-04-02 21:57:17,235 | INFO     | this job has now completed (state=finished)
[2025-04-02 23:57:33] 2025-04-02 21:57:17,235 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-02 23:57:33] 2025-04-02 21:57:17,235 | INFO     | log transfer has been attempted: DONE
[2025-04-02 23:57:33] 2025-04-02 21:57:17,235 | INFO     | job 6584888380 has finished - writing final server update
[2025-04-02 23:57:33] 2025-04-02 21:57:17,235 | INFO     | total number of processed events: 400 (read)
[2025-04-02 23:57:33] 2025-04-02 21:57:17,236 | INFO     | executing command: lscpu
[2025-04-02 23:57:33] 2025-04-02 21:57:17,267 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-02 23:57:33] 2025-04-02 21:57:18,968 | INFO     | 4724s have passed since pilot start
[2025-04-02 23:57:33] 2025-04-02 21:57:19,153 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-02 23:57:33] 2025-04-02 21:57:19,156 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6584888380/memory_monitor_summary.json (trf name=prmon)
[2025-04-02 23:57:33] 2025-04-02 21:57:19,157 | INFO     | extracted standard info from prmon json
[2025-04-02 23:57:33] 2025-04-02 21:57:19,157 | INFO     | extracted standard memory fields from prmon json
[2025-04-02 23:57:33] 2025-04-02 21:57:19,157 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-02 23:57:33] 2025-04-02 21:57:19,158 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-02 23:57:33] 2025-04-02 21:57:19,158 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-02 23:57:33] 2025-04-02 21:57:19,159 | INFO     | fitting pss+swap vs Time
[2025-04-02 23:57:33] 2025-04-02 21:57:19,159 | INFO     | model: linear, x: [1743626639.0, 1743626700.0, 1743626761.0, 1743626822.0, 1743626883.0, 1743626944.0, 1743627005.0, 1743627066.0, 1743627127.0, 1743627188.0, 1743
[2025-04-02 23:57:33] 2025-04-02 21:57:19,159 | INFO     | sum of square deviations: 110960220.0
[2025-04-02 23:57:33] 2025-04-02 21:57:19,159 | INFO     | sum of deviations: 4499748509.0
[2025-04-02 23:57:33] 2025-04-02 21:57:19,159 | INFO     | mean x: 1743628774.0
[2025-04-02 23:57:33] 2025-04-02 21:57:19,159 | INFO     | mean y: 2329778.7183098593
[2025-04-02 23:57:33] 2025-04-02 21:57:19,159 | INFO     | -- intersect: -70706713300.46808
[2025-04-02 23:57:33] 2025-04-02 21:57:19,159 | INFO     | intersect: -70706713300.46808
[2025-04-02 23:57:33] 2025-04-02 21:57:19,160 | INFO     | chi2: 0.9929405594647172
[2025-04-02 23:57:33] 2025-04-02 21:57:19,160 | INFO     | -- intersect: -70706713300.46808
[2025-04-02 23:57:33] 2025-04-02 21:57:19,160 | INFO     | current memory leak: 40.55 B/s (using 71 data points, chi2=0.99)
[2025-04-02 23:57:33] 2025-04-02 21:57:19,160 | INFO     | ..............................
[2025-04-02 23:57:33] 2025-04-02 21:57:19,160 | INFO     | . Timing measurements:
[2025-04-02 23:57:33] 2025-04-02 21:57:19,160 | INFO     | . get job = 0 s
[2025-04-02 23:57:33] 2025-04-02 21:57:19,160 | INFO     | . initial setup = 1 s
[2025-04-02 23:57:33] 2025-04-02 21:57:19,160 | INFO     | . payload setup = 2 s
[2025-04-02 23:57:33] 2025-04-02 21:57:19,160 | INFO     | . stage-in = 0 s
[2025-04-02 23:57:33] 2025-04-02 21:57:19,160 | INFO     | . payload execution = 4699 s
[2025-04-02 23:57:33] 2025-04-02 21:57:19,160 | INFO     | . stage-out = 0 s
[2025-04-02 23:57:33] 2025-04-02 21:57:19,160 | INFO     | . log creation = 0 s
[2025-04-02 23:57:33] 2025-04-02 21:57:19,160 | INFO     | ..............................
[2025-04-02 23:57:33] 2025-04-02 21:57:19,205 | WARNING  | process 992824 can no longer be monitored (due to stat problems) - aborting
[2025-04-02 23:57:33] 2025-04-02 21:57:19,205 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6584888380/memory_monitor_summary.json (trf name=prmon)
[2025-04-02 23:57:33] 2025-04-02 21:57:19,214 | INFO     | 
[2025-04-02 23:57:33] 2025-04-02 21:57:19,214 | INFO     | job summary report
[2025-04-02 23:57:33] 2025-04-02 21:57:19,214 | INFO     | --------------------------------------------------
[2025-04-02 23:57:33] 2025-04-02 21:57:19,214 | INFO     | PanDA job id: 6584888380
[2025-04-02 23:57:33] 2025-04-02 21:57:19,214 | INFO     | task id: 44004367
[2025-04-02 23:57:33] 2025-04-02 21:57:19,214 | INFO     | errors: (none)
[2025-04-02 23:57:33] 2025-04-02 21:57:19,214 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-02 23:57:33] 2025-04-02 21:57:19,214 | INFO     | pilot state: finished 
[2025-04-02 23:57:33] 2025-04-02 21:57:19,214 | INFO     | transexitcode: 0
[2025-04-02 23:57:33] 2025-04-02 21:57:19,214 | INFO     | exeerrorcode: 0
[2025-04-02 23:57:33] 2025-04-02 21:57:19,214 | INFO     | exeerrordiag: 
[2025-04-02 23:57:33] 2025-04-02 21:57:19,214 | INFO     | exitcode: 0
[2025-04-02 23:57:33] 2025-04-02 21:57:19,215 | INFO     | exitmsg: OK
[2025-04-02 23:57:33] 2025-04-02 21:57:19,215 | INFO     | cpuconsumptiontime: 16014 s
[2025-04-02 23:57:33] 2025-04-02 21:57:19,215 | INFO     | nevents: 400
[2025-04-02 23:57:33] 2025-04-02 21:57:19,215 | INFO     | neventsw: 0
[2025-04-02 23:57:33] 2025-04-02 21:57:19,215 | INFO     | pid: 992824
[2025-04-02 23:57:33] 2025-04-02 21:57:19,215 | INFO     | pgrp: 992824
[2025-04-02 23:57:33] 2025-04-02 21:57:19,215 | INFO     | corecount: 4
[2025-04-02 23:57:33] 2025-04-02 21:57:19,215 | INFO     | event service: False
[2025-04-02 23:57:33] 2025-04-02 21:57:19,215 | INFO     | sizes: {0: 2417237, 2: 2417443, 11: 2417471, 4705: 2443686, 4707: 2452641, 4708: 2452697, 4710: 2452995}
[2025-04-02 23:57:33] 2025-04-02 21:57:19,215 | INFO     | --------------------------------------------------
[2025-04-02 23:57:33] 2025-04-02 21:57:19,215 | INFO     | 
[2025-04-02 23:57:33] 2025-04-02 21:57:19,215 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-04-02 23:57:33] 2025-04-02 21:57:19,227 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,227 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,227 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,227 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,227 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,227 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,227 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,227 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,227 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,227 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,227 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,227 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,227 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,228 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,228 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,228 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-02 23:57:33] 2025-04-02 21:57:19,228 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,228 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-02 23:57:33] 2025-04-02 21:57:19,228 | INFO     | job 6584888380 has completed (purged errors)
[2025-04-02 23:57:33] 2025-04-02 21:57:19,228 | INFO     | overall cleanup function is called
[2025-04-02 23:57:33] 2025-04-02 21:57:19,248 | INFO     | number of running child processes to parent process 992824: 1
[2025-04-02 23:57:33] 2025-04-02 21:57:19,248 | INFO     | maximum number of monitored processes: 6
[2025-04-02 23:57:33] 2025-04-02 21:57:19,249 | INFO     | aborting job monitoring since job object (job id=6584888380) has expired
[2025-04-02 23:57:33] 2025-04-02 21:57:20,232 | INFO     | --- collectZombieJob: --- 10, [992824]
[2025-04-02 23:57:33] 2025-04-02 21:57:20,232 | INFO     | zombie collector waiting for pid 992824
[2025-04-02 23:57:33] 2025-04-02 21:57:20,232 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-02 23:57:33] 2025-04-02 21:57:20,232 | INFO     | collected zombie processes
[2025-04-02 23:57:33] 2025-04-02 21:57:20,232 | INFO     | will attempt to kill all subprocesses of pid=992824
[2025-04-02 23:57:33] 2025-04-02 21:57:20,272 | INFO     | process IDs to be killed: [992824] (in reverse order)
[2025-04-02 23:57:33] 2025-04-02 21:57:20,307 | WARNING  | found no corresponding commands to process id(s)
[2025-04-02 23:57:33] 2025-04-02 21:57:20,307 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-02 23:57:33] 2025-04-02 21:57:20,309 | INFO     | did not find any defunct processes belonging to 992824
[2025-04-02 23:57:33] 2025-04-02 21:57:20,311 | INFO     | did not find any defunct processes belonging to 992824
[2025-04-02 23:57:33] 2025-04-02 21:57:20,311 | INFO     | ready for new job
[2025-04-02 23:57:33] 2025-04-02 21:57:20,311 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-02 23:57:33] 2025-04-02 21:57:20,312 | INFO     | ***************************************
[2025-04-02 23:57:33] 2025-04-02 21:57:20,312 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-02 23:57:33] 2025-04-02 21:57:20,312 | INFO     | ***************************************
[2025-04-02 23:57:33] 2025-04-02 21:57:20,312 | INFO     | 
[2025-04-02 23:57:33] 2025-04-02 21:57:20,313 | INFO     | architecture information:
[2025-04-02 23:57:33] 2025-04-02 21:57:20,313 | INFO     | executing command: cat /etc/os-release
[2025-04-02 23:57:33] 2025-04-02 21:57:20,323 | INFO     | cat /etc/os-release:
[2025-04-02 23:57:33] NAME="CentOS Linux"
[2025-04-02 23:57:33] VERSION="7 (Core)"
[2025-04-02 23:57:33] ID="centos"
[2025-04-02 23:57:33] ID_LIKE="rhel fedora"
[2025-04-02 23:57:33] VERSION_ID="7"
[2025-04-02 23:57:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-02 23:57:33] ANSI_COLOR="0;31"
[2025-04-02 23:57:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-02 23:57:33] HOME_URL="https://www.centos.org/"
[2025-04-02 23:57:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-02 23:57:33] 
[2025-04-02 23:57:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-02 23:57:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-02 23:57:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-02 23:57:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-02 23:57:33] 
[2025-04-02 23:57:33] 2025-04-02 21:57:20,323 | INFO     | ***************************************
[2025-04-02 23:57:33] 2025-04-02 21:57:20,824 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-04-02 23:57:33] 2025-04-02 21:57:20,836 | INFO     | sufficient remaining disk space (1761704148992 B)
[2025-04-02 23:57:33] 2025-04-02 21:57:20,836 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-02 23:57:33] 2025-04-02 21:57:20,836 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-02 23:57:33] 2025-04-02 21:57:20,837 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-02 23:57:33] 2025-04-02 21:57:20,837 | INFO     | aborting loop
[2025-04-02 23:57:33] 2025-04-02 21:57:20,837 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-02 23:57:33] 2025-04-02 21:57:20,837 | INFO     | found 0 job(s) in 20 queues
[2025-04-02 23:57:33] 2025-04-02 21:57:20,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-02 23:57:33] 2025-04-02 21:57:20,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-02 23:57:33] 2025-04-02 21:57:20,837 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-02 23:57:33] 2025-04-02 21:57:21,440 | INFO     | all data control threads have been joined
[2025-04-02 23:57:33] 2025-04-02 21:57:21,519 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-02 23:57:33] 2025-04-02 21:57:21,560 | INFO     | all job control threads have been joined
[2025-04-02 23:57:33] 2025-04-02 21:57:21,840 | INFO     | [job] retrieve thread has finished
[2025-04-02 23:57:33] 2025-04-02 21:57:21,840 | INFO     | [job] job monitor thread has finished
[2025-04-02 23:57:33] 2025-04-02 21:57:21,841 | INFO     | [job] queue monitor thread has finished
[2025-04-02 23:57:33] 2025-04-02 21:57:21,880 | INFO     | [data] copytool_in thread has finished
[2025-04-02 23:57:33] 2025-04-02 21:57:22,216 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-02 23:57:33] 2025-04-02 21:57:22,280 | INFO     | all payload control threads have been joined
[2025-04-02 23:57:33] 2025-04-02 21:57:22,444 | INFO     | [data] control thread has finished
[2025-04-02 23:57:33] 2025-04-02 21:57:22,565 | INFO     | [job] control thread has finished
[2025-04-02 23:57:33] 2025-04-02 21:57:22,684 | INFO     | [job] validate thread has finished
[2025-04-02 23:57:33] 2025-04-02 21:57:22,704 | INFO     | [payload] failed_post thread has finished
[2025-04-02 23:57:33] 2025-04-02 21:57:22,744 | INFO     | [payload] validate_pre thread has finished
[2025-04-02 23:57:33] 2025-04-02 21:57:22,801 | INFO     | [payload] execute_payloads thread has finished
[2025-04-02 23:57:33] 2025-04-02 21:57:23,081 | INFO     | [job] create_data_payload thread has finished
[2025-04-02 23:57:33] 2025-04-02 21:57:23,241 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-02 23:57:33] 2025-04-02 21:57:23,285 | INFO     | [payload] control thread has finished
[2025-04-02 23:57:33] 2025-04-02 21:57:23,336 | INFO     | [payload] validate_post thread has finished
[2025-04-02 23:57:33] 2025-04-02 21:57:23,524 | INFO     | [data] copytool_out thread has finished
[2025-04-02 23:57:33] 2025-04-02 21:57:27,244 | INFO     | [data] queue_monitor thread has finished
[2025-04-02 23:57:33] 2025-04-02 21:57:27,984 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067240728384)>', '<ExcThread(monitor, started 140066710079232)>']
[2025-04-02 23:57:33] 2025-04-02 21:57:28,873 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-02 23:57:33] 2025-04-02 21:57:28,873 | INFO     | [monitor] control thread has ended
[2025-04-02 23:57:33] 2025-04-02 21:57:33,009 | INFO     | all workflow threads have been joined
[2025-04-02 23:57:33] 2025-04-02 21:57:33,009 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-02 23:57:33] 2025-04-02 21:57:33,009 | INFO     | traces error code: 0
[2025-04-02 23:57:33] 2025-04-02 21:57:33,009 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-02 23:57:33] 2025-04-02 21:57:33,082 [wrapper] ==== pilot stdout END ====
[2025-04-02 23:57:33] 2025-04-02 21:57:33,083 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-02 23:57:33] 2025-04-02 21:57:33,084 [wrapper] pilotpid: 986155
[2025-04-02 23:57:33] 2025-04-02 21:57:33,085 [wrapper] Pilot exit status: 0
[2025-04-02 23:57:33] 2025-04-02 21:57:33,090 [wrapper] pandaids: 6584888380
[2025-04-02 23:57:33] 2025-04-02 21:57:33,111 [wrapper] cleanup supervisor_pilot 1167898 986156
[2025-04-02 23:57:33] 2025-04-02 21:57:33,112 [wrapper] Test setup, not cleaning
[2025-04-02 23:57:33] 2025-04-02 21:57:33,114 [wrapper] apfmon messages muted
[2025-04-02 23:57:33] 2025-04-02 21:57:33,115 [wrapper] ==== wrapper stdout END ====
[2025-04-02 23:57:33] 2025-04-02 21:57:33,116 [wrapper] ==== wrapper stderr END ====
[2025-04-02 23:57:33]  *** Error codes and diagnostics ***
[2025-04-02 23:57:33]     "exeErrorCode": 0,
[2025-04-02 23:57:33]     "exeErrorDiag": "",
[2025-04-02 23:57:33]     "pilotErrorCode": 0,
[2025-04-02 23:57:33]     "pilotErrorDiag": "",
[2025-04-02 23:57:33]  *** Listing of results directory ***
[2025-04-02 23:57:33] total 415560
[2025-04-02 23:57:33] -rw-r--r-- 1 boinc boinc    494584 Apr  2 16:21 pilot3.tar.gz
[2025-04-02 23:57:33] -rw-r--r-- 1 boinc boinc      5112 Apr  2 16:26 queuedata.json
[2025-04-02 23:57:33] -rwx------ 1 boinc boinc     37140 Apr  2 16:27 runpilot2-wrapper.sh
[2025-04-02 23:57:33] -rw-r--r-- 1 boinc boinc       100 Apr  2 22:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-02 23:57:33] -rwxr-xr-x 1 boinc boinc      7986 Apr  2 22:38 run_atlas
[2025-04-02 23:57:33] -rw-r--r-- 1 boinc boinc       105 Apr  2 22:38 job.xml
[2025-04-02 23:57:33] -rw-r--r-- 2 boinc boinc     17571 Apr  2 22:38 start_atlas.sh
[2025-04-02 23:57:33] drwxrwx--x 2 boinc boinc      4096 Apr  2 22:38 shared
[2025-04-02 23:57:33] -rw-r--r-- 2 boinc boinc    507236 Apr  2 22:38 input.tar.gz
[2025-04-02 23:57:33] -rw-r--r-- 1 boinc boinc      6751 Apr  2 22:38 init_data.xml
[2025-04-02 23:57:33] -rw-r--r-- 2 boinc boinc 224161766 Apr  2 22:38 EVNT.44004365._000063.pool.root.1
[2025-04-02 23:57:33] -rw-r--r-- 1 boinc boinc         0 Apr  2 22:38 boinc_lockfile
[2025-04-02 23:57:33] -rw-r--r-- 1 boinc boinc      2547 Apr  2 22:38 pandaJob.out
[2025-04-02 23:57:33] -rw------- 1 boinc boinc       424 Apr  2 22:38 setup.sh.local
[2025-04-02 23:57:33] -rw------- 1 boinc boinc    991556 Apr  2 22:38 agis_schedconf.cvmfs.json
[2025-04-02 23:57:33] -rw------- 1 boinc boinc   1603449 Apr  2 22:38 agis_ddmendpoints.agis.ALL.json
[2025-04-02 23:57:33] drwx------ 4 boinc boinc      4096 Apr  2 22:38 pilot3
[2025-04-02 23:57:33] -rw------- 1 boinc boinc 196096136 Apr  2 23:56 HITS.44004367._001560.pool.root.1
[2025-04-02 23:57:33] -rw-r--r-- 1 boinc boinc       529 Apr  2 23:56 boinc_task_state.xml
[2025-04-02 23:57:33] -rw------- 1 boinc boinc      1028 Apr  2 23:57 memory_monitor_summary.json
[2025-04-02 23:57:33] -rw------- 1 boinc boinc    240343 Apr  2 23:57 log.44004367._001560.job.log.tgz.1
[2025-04-02 23:57:33] -rw------- 1 boinc boinc        95 Apr  2 23:57 pilot_heartbeat.json
[2025-04-02 23:57:33] -rw------- 1 boinc boinc      7693 Apr  2 23:57 heartbeat.json
[2025-04-02 23:57:33] -rw------- 1 boinc boinc      4351 Apr  2 23:57 pilotlog.txt
[2025-04-02 23:57:33] -rw-r--r-- 1 boinc boinc      8192 Apr  2 23:57 boinc_mmap_file
[2025-04-02 23:57:33] -rw------- 1 boinc boinc    472845 Apr  2 23:57 log.44004367._001560.job.log.1
[2025-04-02 23:57:33] -rw-r--r-- 1 boinc boinc        27 Apr  2 23:57 wrapper_checkpoint.txt
[2025-04-02 23:57:33] -rw------- 1 boinc boinc       357 Apr  2 23:57 output.list
[2025-04-02 23:57:33] -rw-r--r-- 1 boinc boinc       620 Apr  2 23:57 runtime_log
[2025-04-02 23:57:33] -rw------- 1 boinc boinc    737280 Apr  2 23:57 result.tar.gz
[2025-04-02 23:57:33] -rw------- 1 boinc boinc       657 Apr  2 23:57 tIvKDmgEEK7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmy8rKDmJapEYm.diag
[2025-04-02 23:57:33] -rw-r--r-- 1 boinc boinc     11177 Apr  2 23:57 runtime_log.err
[2025-04-02 23:57:33] -rw-r--r-- 1 boinc boinc     21473 Apr  2 23:57 stderr.txt
[2025-04-02 23:57:33] HITS file was successfully produced:
[2025-04-02 23:57:33] -rw------- 1 boinc boinc 196096136 Apr  2 23:56 shared/HITS.pool.root.1
[2025-04-02 23:57:33]  *** Contents of shared directory: ***
[2025-04-02 23:57:33] total 411656
[2025-04-02 23:57:33] -rw-r--r-- 2 boinc boinc     17571 Apr  2 22:38 start_atlas.sh
[2025-04-02 23:57:33] -rw-r--r-- 2 boinc boinc    507236 Apr  2 22:38 input.tar.gz
[2025-04-02 23:57:33] -rw-r--r-- 2 boinc boinc 224161766 Apr  2 22:38 ATLAS.root_0
[2025-04-02 23:57:33] -rw------- 1 boinc boinc 196096136 Apr  2 23:56 HITS.pool.root.1
[2025-04-02 23:57:33] -rw------- 1 boinc boinc    737280 Apr  2 23:57 result.tar.gz
23:57:35 (982384): run_atlas exited; CPU time 16012.440569
23:57:35 (982384): called boinc_finish(0)

</stderr_txt>
]]>

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