Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
22:30:37 (2699416): wrapper (7.7.26015): starting
22:30:37 (2699416): wrapper: running run_atlas (--nthreads 12)
[2025-04-02 22:30:37] Arguments: --nthreads 12
[2025-04-02 22:30:37] Threads: 12
[2025-04-02 22:30:37] Checking for CVMFS
[2025-04-02 22:30:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-02 22:30:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-02 22:30:38] Running cvmfs_config stat atlas.cern.ch
[2025-04-02 22:30:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-02 22:30:40] 2.12.6.0 4067295 1824 167320 144424 0 187 3086987 4096000 15599 130560 0 25110235 99.999 504047 1708 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-02 22:30:40] CVMFS is ok
[2025-04-02 22:30:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-02 22:30:40] Checking for apptainer binary...
[2025-04-02 22:30:40] apptainer is not installed, using version from CVMFS
[2025-04-02 22:30:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-02 22:30:41] epyc7v12
[2025-04-02 22:30:41] apptainer works
[2025-04-02 22:30:41] Set ATHENA_PROC_NUMBER=12
[2025-04-02 22:30:41] Set ATHENA_CORE_NUMBER=12
[2025-04-02 22:30:41] Starting ATLAS job with PandaID=6582531327
[2025-04-02 22:30:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-03 02:25:33]  *** The last 200 lines of the pilot log: ***
[2025-04-03 02:25:33] 2025-04-03 02:25:14,567 | INFO     | mean x: 1743640773.0724638
[2025-04-03 02:25:33] 2025-04-03 02:25:14,567 | INFO     | mean y: 2698625.913043478
[2025-04-03 02:25:33] 2025-04-03 02:25:14,567 | INFO     | -- intersect: -50588596512.38577
[2025-04-03 02:25:33] 2025-04-03 02:25:14,567 | INFO     | intersect: -50588596512.38577
[2025-04-03 02:25:33] 2025-04-03 02:25:14,567 | INFO     | chi2: 1.6943180632687584
[2025-04-03 02:25:33] 2025-04-03 02:25:14,567 | INFO     | current chi2=1.6943180632687584 (change=53.387927640613434 %)
[2025-04-03 02:25:33] 2025-04-03 02:25:14,568 | INFO     | model: linear, x: [1743634795.0, 1743634856.0, 1743634917.0, 1743634978.0, 1743635039.0, 1743635100.0, 1743635161.0, 1743635222.0, 1743635283.0, 1743635344.0, 1743
[2025-04-03 02:25:33] 2025-04-03 02:25:14,568 | INFO     | sum of square deviations: 2555815315.3861365
[2025-04-03 02:25:33] 2025-04-03 02:25:14,569 | INFO     | sum of deviations: 34769286083.29704
[2025-04-03 02:25:33] 2025-04-03 02:25:14,569 | INFO     | mean x: 1743640925.5742574
[2025-04-03 02:25:33] 2025-04-03 02:25:14,570 | INFO     | mean y: 2733848.4801980196
[2025-04-03 02:25:33] 2025-04-03 02:25:14,570 | INFO     | -- intersect: -23717739928.662365
[2025-04-03 02:25:33] 2025-04-03 02:25:14,570 | INFO     | intersect: -23717739928.662365
[2025-04-03 02:25:33] 2025-04-03 02:25:14,570 | INFO     | chi2: 0.27816697882713437
[2025-04-03 02:25:33] 2025-04-03 02:25:14,570 | INFO     | current chi2=0.27816697882713437 (change=83.5823636153367 %)
[2025-04-03 02:25:33] 2025-04-03 02:25:14,570 | INFO     | model: linear, x: [1743635100.0, 1743635161.0, 1743635222.0, 1743635283.0, 1743635344.0, 1743635405.0, 1743635466.0, 1743635527.0, 1743635588.0, 1743635649.0, 1743
[2025-04-03 02:25:33] 2025-04-03 02:25:14,571 | INFO     | sum of square deviations: 2370681687.857868
[2025-04-03 02:25:33] 2025-04-03 02:25:14,572 | INFO     | sum of deviations: 15638053742.487309
[2025-04-03 02:25:33] 2025-04-03 02:25:14,572 | INFO     | mean x: 1743641078.076142
[2025-04-03 02:25:33] 2025-04-03 02:25:14,572 | INFO     | mean y: 2749583.16751269
[2025-04-03 02:25:33] 2025-04-03 02:25:14,572 | INFO     | -- intersect: -11499069925.63446
[2025-04-03 02:25:33] 2025-04-03 02:25:14,573 | INFO     | intersect: -11499069925.63446
[2025-04-03 02:25:33] 2025-04-03 02:25:14,573 | INFO     | chi2: 0.04436449682520203
[2025-04-03 02:25:33] 2025-04-03 02:25:14,573 | INFO     | current chi2=0.04436449682520203 (change=84.05112748743187 %)
[2025-04-03 02:25:33] 2025-04-03 02:25:14,573 | INFO     | model: linear, x: [1743635405.0, 1743635466.0, 1743635527.0, 1743635588.0, 1743635649.0, 1743635710.0, 1743635771.0, 1743635832.0, 1743635894.0, 1743635954.0, 1743
[2025-04-03 02:25:33] 2025-04-03 02:25:14,573 | INFO     | sum of square deviations: 2194711022.828125
[2025-04-03 02:25:33] 2025-04-03 02:25:14,575 | INFO     | sum of deviations: 9810791628.03125
[2025-04-03 02:25:33] 2025-04-03 02:25:14,575 | INFO     | mean x: 1743641230.578125
[2025-04-03 02:25:33] 2025-04-03 02:25:14,575 | INFO     | mean y: 2754577.53125
[2025-04-03 02:25:33] 2025-04-03 02:25:14,575 | INFO     | -- intersect: -7791666013.2955
[2025-04-03 02:25:33] 2025-04-03 02:25:14,575 | INFO     | intersect: -7791666013.2955
[2025-04-03 02:25:33] 2025-04-03 02:25:14,576 | INFO     | chi2: 0.002163096608109481
[2025-04-03 02:25:33] 2025-04-03 02:25:14,576 | INFO     | current chi2=0.002163096608109481 (change=95.12426204982742 %)
[2025-04-03 02:25:33] 2025-04-03 02:25:14,576 | INFO     | model: linear, x: [1743635710.0, 1743635771.0, 1743635832.0, 1743635894.0, 1743635954.0, 1743636015.0, 1743636076.0, 1743636137.0, 1743636198.0, 1743636259.0, 1743
[2025-04-03 02:25:33] 2025-04-03 02:25:14,576 | INFO     | sum of square deviations: 2027670757.7967834
[2025-04-03 02:25:33] 2025-04-03 02:25:14,577 | INFO     | sum of deviations: 9031399628.791445
[2025-04-03 02:25:33] 2025-04-03 02:25:14,578 | INFO     | mean x: 1743641383.0802138
[2025-04-03 02:25:33] 2025-04-03 02:25:14,578 | INFO     | mean y: 2755285.2139037433
[2025-04-03 02:25:33] 2025-04-03 02:25:14,578 | INFO     | -- intersect: -7763555926.47754
[2025-04-03 02:25:33] 2025-04-03 02:25:14,578 | INFO     | intersect: -7763555926.47754
[2025-04-03 02:25:33] 2025-04-03 02:25:14,578 | INFO     | chi2: 0.002092275429795428
[2025-04-03 02:25:33] 2025-04-03 02:25:14,578 | INFO     | current chi2=0.002092275429795428 (change=3.2740645077313286 %)
[2025-04-03 02:25:33] 2025-04-03 02:25:14,579 | INFO     | left removable region: 70
[2025-04-03 02:25:33] 2025-04-03 02:25:14,579 | INFO     | model: linear, x: [1743637845.0, 1743637906.0, 1743637967.0, 1743638028.0, 1743638089.0, 1743638150.0, 1743638211.0, 1743638272.0, 1743638333.0, 1743638394.0, 1743
[2025-04-03 02:25:33] 2025-04-03 02:25:14,580 | INFO     | sum of square deviations: 964993325.1575315
[2025-04-03 02:25:33] 2025-04-03 02:25:14,581 | INFO     | sum of deviations: 3513711437.79452
[2025-04-03 02:25:33] 2025-04-03 02:25:14,581 | INFO     | mean x: 1743642267.5958905
[2025-04-03 02:25:33] 2025-04-03 02:25:14,582 | INFO     | mean y: 2761041.657534247
[2025-04-03 02:25:33] 2025-04-03 02:25:14,582 | INFO     | -- intersect: -6346148965.6458845
[2025-04-03 02:25:33] 2025-04-03 02:25:14,582 | INFO     | intersect: -6346148965.6458845
[2025-04-03 02:25:33] 2025-04-03 02:25:14,582 | INFO     | chi2: 0.0005090925968826766
[2025-04-03 02:25:33] 2025-04-03 02:25:14,582 | INFO     | -- intersect: -6346148965.6458845
[2025-04-03 02:25:33] 2025-04-03 02:25:14,582 | INFO     | current memory leak: 3.64 B/s (using 146 data points, chi2=0.00)
[2025-04-03 02:25:33] 2025-04-03 02:25:14,583 | INFO     | ..............................
[2025-04-03 02:25:33] 2025-04-03 02:25:14,583 | INFO     | . Timing measurements:
[2025-04-03 02:25:33] 2025-04-03 02:25:14,583 | INFO     | . get job = 0 s
[2025-04-03 02:25:33] 2025-04-03 02:25:14,583 | INFO     | . initial setup = 10 s
[2025-04-03 02:25:33] 2025-04-03 02:25:14,583 | INFO     | . payload setup = 117 s
[2025-04-03 02:25:33] 2025-04-03 02:25:14,584 | INFO     | . stage-in = 0 s
[2025-04-03 02:25:33] 2025-04-03 02:25:14,584 | INFO     | . payload execution = 13601 s
[2025-04-03 02:25:33] 2025-04-03 02:25:14,584 | INFO     | . stage-out = 2 s
[2025-04-03 02:25:33] 2025-04-03 02:25:14,584 | INFO     | . log creation = 0 s
[2025-04-03 02:25:33] 2025-04-03 02:25:14,584 | INFO     | ..............................
[2025-04-03 02:25:33] 2025-04-03 02:25:14,696 | INFO     | 
[2025-04-03 02:25:33] 2025-04-03 02:25:14,697 | INFO     | job summary report
[2025-04-03 02:25:33] 2025-04-03 02:25:14,697 | INFO     | --------------------------------------------------
[2025-04-03 02:25:33] 2025-04-03 02:25:14,697 | INFO     | PanDA job id: 6582531327
[2025-04-03 02:25:33] 2025-04-03 02:25:14,697 | INFO     | task id: 43634898
[2025-04-03 02:25:33] 2025-04-03 02:25:14,697 | INFO     | errors: (none)
[2025-04-03 02:25:33] 2025-04-03 02:25:14,697 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-03 02:25:33] 2025-04-03 02:25:14,698 | INFO     | pilot state: finished 
[2025-04-03 02:25:33] 2025-04-03 02:25:14,698 | INFO     | transexitcode: 0
[2025-04-03 02:25:33] 2025-04-03 02:25:14,698 | INFO     | exeerrorcode: 0
[2025-04-03 02:25:33] 2025-04-03 02:25:14,698 | INFO     | exeerrordiag: 
[2025-04-03 02:25:33] 2025-04-03 02:25:14,698 | INFO     | exitcode: 0
[2025-04-03 02:25:33] 2025-04-03 02:25:14,698 | INFO     | exitmsg: OK
[2025-04-03 02:25:33] 2025-04-03 02:25:14,698 | INFO     | cpuconsumptiontime: 81470 s
[2025-04-03 02:25:33] 2025-04-03 02:25:14,698 | INFO     | nevents: 400
[2025-04-03 02:25:33] 2025-04-03 02:25:14,698 | INFO     | neventsw: 0
[2025-04-03 02:25:33] 2025-04-03 02:25:14,698 | INFO     | pid: 2757114
[2025-04-03 02:25:33] 2025-04-03 02:25:14,698 | INFO     | pgrp: 2757114
[2025-04-03 02:25:33] 2025-04-03 02:25:14,699 | INFO     | corecount: 12
[2025-04-03 02:25:33] 2025-04-03 02:25:14,699 | INFO     | event service: False
[2025-04-03 02:25:33] 2025-04-03 02:25:14,699 | INFO     | sizes: {0: 2416474, 1: 2417183, 2: 2417183, 3: 2417410, 14: 2417410, 25: 2417438, 36: 2417594, 46: 2417622, 57: 2417650, 68: 2417678, 79: 2417706, 83: 2418248, 89:
[2025-04-03 02:25:33] 2025-04-03 02:25:14,699 | INFO     | --------------------------------------------------
[2025-04-03 02:25:33] 2025-04-03 02:25:14,699 | INFO     | 
[2025-04-03 02:25:33] 2025-04-03 02:25:14,699 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/18
[2025-04-03 02:25:33] 2025-04-03 02:25:14,722 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,722 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,722 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,722 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,723 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,723 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,723 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,723 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,723 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,723 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,724 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,724 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,724 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,724 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,724 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,724 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,724 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-03 02:25:33] 2025-04-03 02:25:14,724 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,724 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-03 02:25:33] 2025-04-03 02:25:14,724 | INFO     | job 6582531327 has completed (purged errors)
[2025-04-03 02:25:33] 2025-04-03 02:25:14,724 | INFO     | overall cleanup function is called
[2025-04-03 02:25:33] 2025-04-03 02:25:14,803 | WARNING  | process 2757114 can no longer be monitored (due to stat problems) - aborting
[2025-04-03 02:25:33] 2025-04-03 02:25:15,240 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/18/memory_monitor_summary.json (trf name=prmon)
[2025-04-03 02:25:33] 2025-04-03 02:25:15,497 | INFO     | number of running child processes to parent process 2757114: 1
[2025-04-03 02:25:33] 2025-04-03 02:25:15,498 | INFO     | maximum number of monitored processes: 8
[2025-04-03 02:25:33] 2025-04-03 02:25:15,498 | INFO     | aborting job monitoring since job object (job id=6582531327) has expired
[2025-04-03 02:25:33] 2025-04-03 02:25:15,731 | INFO     | --- collectZombieJob: --- 10, [2757114]
[2025-04-03 02:25:33] 2025-04-03 02:25:15,731 | INFO     | zombie collector waiting for pid 2757114
[2025-04-03 02:25:33] 2025-04-03 02:25:15,731 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-03 02:25:33] 2025-04-03 02:25:15,731 | INFO     | collected zombie processes
[2025-04-03 02:25:33] 2025-04-03 02:25:15,731 | INFO     | will attempt to kill all subprocesses of pid=2757114
[2025-04-03 02:25:33] 2025-04-03 02:25:15,997 | INFO     | process IDs to be killed: [2757114] (in reverse order)
[2025-04-03 02:25:33] 2025-04-03 02:25:16,208 | WARNING  | found no corresponding commands to process id(s)
[2025-04-03 02:25:33] 2025-04-03 02:25:16,208 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-03 02:25:33] 2025-04-03 02:25:16,226 | INFO     | did not find any defunct processes belonging to 2757114
[2025-04-03 02:25:33] 2025-04-03 02:25:16,244 | INFO     | did not find any defunct processes belonging to 2757114
[2025-04-03 02:25:33] 2025-04-03 02:25:16,245 | INFO     | ready for new job
[2025-04-03 02:25:33] 2025-04-03 02:25:16,245 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-03 02:25:33] 2025-04-03 02:25:16,247 | INFO     | ***************************************
[2025-04-03 02:25:33] 2025-04-03 02:25:16,247 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-03 02:25:33] 2025-04-03 02:25:16,247 | INFO     | ***************************************
[2025-04-03 02:25:33] 2025-04-03 02:25:16,248 | INFO     | 
[2025-04-03 02:25:33] 2025-04-03 02:25:16,276 | INFO     | architecture information:
[2025-04-03 02:25:33] 2025-04-03 02:25:16,277 | INFO     | executing command: cat /etc/os-release
[2025-04-03 02:25:33] 2025-04-03 02:25:16,296 | INFO     | cat /etc/os-release:
[2025-04-03 02:25:33] NAME="CentOS Linux"
[2025-04-03 02:25:33] VERSION="7 (Core)"
[2025-04-03 02:25:33] ID="centos"
[2025-04-03 02:25:33] ID_LIKE="rhel fedora"
[2025-04-03 02:25:33] VERSION_ID="7"
[2025-04-03 02:25:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-03 02:25:33] ANSI_COLOR="0;31"
[2025-04-03 02:25:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-03 02:25:33] HOME_URL="https://www.centos.org/"
[2025-04-03 02:25:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-03 02:25:33] 
[2025-04-03 02:25:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-03 02:25:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-03 02:25:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-03 02:25:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-03 02:25:33] 
[2025-04-03 02:25:33] 2025-04-03 02:25:16,296 | INFO     | ***************************************
[2025-04-03 02:25:33] 2025-04-03 02:25:16,799 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/18
[2025-04-03 02:25:33] 2025-04-03 02:25:16,817 | INFO     | sufficient remaining disk space (306665488384 B)
[2025-04-03 02:25:33] 2025-04-03 02:25:16,818 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-03 02:25:33] 2025-04-03 02:25:16,818 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-03 02:25:33] 2025-04-03 02:25:16,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-03 02:25:33] 2025-04-03 02:25:16,818 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-03 02:25:33] 2025-04-03 02:25:16,818 | INFO     | aborting loop
[2025-04-03 02:25:33] 2025-04-03 02:25:16,819 | INFO     | found 0 job(s) in 20 queues
[2025-04-03 02:25:33] 2025-04-03 02:25:16,819 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-03 02:25:33] 2025-04-03 02:25:16,819 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-03 02:25:33] 2025-04-03 02:25:17,518 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-03 02:25:33] 2025-04-03 02:25:17,643 | INFO     | all payload control threads have been joined
[2025-04-03 02:25:33] 2025-04-03 02:25:17,791 | INFO     | all data control threads have been joined
[2025-04-03 02:25:33] 2025-04-03 02:25:17,823 | INFO     | [job] job monitor thread has finished
[2025-04-03 02:25:33] 2025-04-03 02:25:17,823 | INFO     | [job] retrieve thread has finished
[2025-04-03 02:25:33] 2025-04-03 02:25:17,923 | INFO     | [payload] validate_pre thread has finished
[2025-04-03 02:25:33] 2025-04-03 02:25:18,031 | INFO     | [payload] failed_post thread has finished
[2025-04-03 02:25:33] 2025-04-03 02:25:18,061 | INFO     | all job control threads have been joined
[2025-04-03 02:25:33] 2025-04-03 02:25:18,168 | INFO     | [data] copytool_in thread has finished
[2025-04-03 02:25:33] 2025-04-03 02:25:18,367 | INFO     | [job] create_data_payload thread has finished
[2025-04-03 02:25:33] 2025-04-03 02:25:18,647 | INFO     | [payload] control thread has finished
[2025-04-03 02:25:33] 2025-04-03 02:25:18,711 | INFO     | [payload] validate_post thread has finished
[2025-04-03 02:25:33] 2025-04-03 02:25:18,795 | INFO     | [data] control thread has finished
[2025-04-03 02:25:33] 2025-04-03 02:25:18,895 | INFO     | [job] validate thread has finished
[2025-04-03 02:25:33] 2025-04-03 02:25:19,063 | INFO     | [job] control thread has finished
[2025-04-03 02:25:33] 2025-04-03 02:25:19,311 | INFO     | [payload] execute_payloads thread has finished
[2025-04-03 02:25:33] 2025-04-03 02:25:19,524 | INFO     | [data] copytool_out thread has finished
[2025-04-03 02:25:33] 2025-04-03 02:25:19,703 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-03 02:25:33] 2025-04-03 02:25:19,735 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-03 02:25:33] 2025-04-03 02:25:20,707 | INFO     | [job] queue monitor thread has finished
[2025-04-03 02:25:33] 2025-04-03 02:25:23,741 | INFO     | [data] queue_monitor thread has finished
[2025-04-03 02:25:33] 2025-04-03 02:25:27,171 | INFO     | job.realtimelogging is not enabled
[2025-04-03 02:25:33] 2025-04-03 02:25:28,175 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-03 02:25:33] 2025-04-03 02:25:28,448 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140685069727552)>', '<ExcThread(monitor, started 140684765931264)>']
[2025-04-03 02:25:33] 2025-04-03 02:25:28,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-03 02:25:33] 2025-04-03 02:25:28,871 | INFO     | [monitor] control thread has ended
[2025-04-03 02:25:33] 2025-04-03 02:25:33,471 | INFO     | all workflow threads have been joined
[2025-04-03 02:25:33] 2025-04-03 02:25:33,471 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-03 02:25:33] 2025-04-03 02:25:33,471 | INFO     | traces error code: 0
[2025-04-03 02:25:33] 2025-04-03 02:25:33,472 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-03 02:25:33] 2025-04-03 02:25:33,631 [wrapper] ==== pilot stdout END ====
[2025-04-03 02:25:33] 2025-04-03 02:25:33,634 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-03 02:25:33] 2025-04-03 02:25:33,638 [wrapper] pilotpid: 2715789
[2025-04-03 02:25:33] 2025-04-03 02:25:33,641 [wrapper] Pilot exit status: 0
[2025-04-03 02:25:33] 2025-04-03 02:25:33,656 [wrapper] pandaids: 6582531327
[2025-04-03 02:25:33] 2025-04-03 02:25:33,754 [wrapper] cleanup supervisor_pilot 3722564 2715790
[2025-04-03 02:25:33] 2025-04-03 02:25:33,758 [wrapper] Test setup, not cleaning
[2025-04-03 02:25:33] 2025-04-03 02:25:33,761 [wrapper] apfmon messages muted
[2025-04-03 02:25:33] 2025-04-03 02:25:33,766 [wrapper] ==== wrapper stdout END ====
[2025-04-03 02:25:33] 2025-04-03 02:25:33,769 [wrapper] ==== wrapper stderr END ====
[2025-04-03 02:25:33]  *** Error codes and diagnostics ***
[2025-04-03 02:25:33]     "exeErrorCode": 0,
[2025-04-03 02:25:33]     "exeErrorDiag": "",
[2025-04-03 02:25:33]     "pilotErrorCode": 0,
[2025-04-03 02:25:33]     "pilotErrorDiag": "",
[2025-04-03 02:25:33]  *** Listing of results directory ***
[2025-04-03 02:25:33] total 680008
[2025-04-03 02:25:33] -rw-r--r-- 1 boinc boinc    494584 Apr  1 15:30 pilot3.tar.gz
[2025-04-03 02:25:33] -rw-r--r-- 1 boinc boinc      5112 Apr  1 15:40 queuedata.json
[2025-04-03 02:25:33] -rwx------ 1 boinc boinc     37140 Apr  1 15:41 runpilot2-wrapper.sh
[2025-04-03 02:25:33] -rw-rw-r-- 1 boinc boinc       100 Apr  2 22:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-03 02:25:33] -rwxr-xr-x 1 boinc boinc      7986 Apr  2 22:30 run_atlas
[2025-04-03 02:25:33] -rw-rw-r-- 1 boinc boinc       105 Apr  2 22:30 job.xml
[2025-04-03 02:25:33] -rw-r--r-- 2 boinc boinc     17571 Apr  2 22:30 start_atlas.sh
[2025-04-03 02:25:33] drwxrwx--x 2 boinc boinc      4096 Apr  2 22:30 shared
[2025-04-03 02:25:33] -rw-r--r-- 2 boinc boinc    507247 Apr  2 22:30 input.tar.gz
[2025-04-03 02:25:33] -rw-rw-r-- 1 boinc boinc      6941 Apr  2 22:30 init_data.xml
[2025-04-03 02:25:33] -rw-r--r-- 2 boinc boinc 363462622 Apr  2 22:30 EVNT.43634896._000091.pool.root.1
[2025-04-03 02:25:33] -rw-rw-r-- 1 boinc boinc         0 Apr  2 22:30 boinc_lockfile
[2025-04-03 02:25:33] -rw-rw-r-- 1 boinc boinc      2595 Apr  2 22:30 pandaJob.out
[2025-04-03 02:25:33] -rw------- 1 boinc boinc       424 Apr  2 22:30 setup.sh.local
[2025-04-03 02:25:33] -rw------- 1 boinc boinc    991540 Apr  2 22:33 agis_schedconf.cvmfs.json
[2025-04-03 02:25:33] drwx------ 4 boinc boinc      4096 Apr  2 22:33 pilot3
[2025-04-03 02:25:33] -rw------- 1 boinc boinc 325210598 Apr  3 02:24 HITS.43634898._005997.pool.root.1
[2025-04-03 02:25:33] -rw-rw-r-- 1 boinc boinc       532 Apr  3 02:24 boinc_task_state.xml
[2025-04-03 02:25:33] -rw------- 1 boinc boinc      1024 Apr  3 02:25 memory_monitor_summary.json
[2025-04-03 02:25:33] -rw------- 1 boinc boinc   1603449 Apr  3 02:25 agis_ddmendpoints.agis.ALL.json
[2025-04-03 02:25:33] -rw------- 1 boinc boinc    473432 Apr  3 02:25 log.43634898._005997.job.log.tgz.1
[2025-04-03 02:25:33] -rw------- 1 boinc boinc        95 Apr  3 02:25 pilot_heartbeat.json
[2025-04-03 02:25:33] -rw------- 1 boinc boinc      7655 Apr  3 02:25 heartbeat.json
[2025-04-03 02:25:33] -rw-rw-r-- 1 boinc boinc      8192 Apr  3 02:25 boinc_mmap_file
[2025-04-03 02:25:33] -rw-rw-r-- 1 boinc boinc        28 Apr  3 02:25 wrapper_checkpoint.txt
[2025-04-03 02:25:33] -rw------- 1 boinc boinc      4439 Apr  3 02:25 pilotlog.txt
[2025-04-03 02:25:33] -rw------- 1 boinc boinc   1429985 Apr  3 02:25 log.43634898._005997.job.log.1
[2025-04-03 02:25:33] -rw------- 1 boinc boinc       357 Apr  3 02:25 output.list
[2025-04-03 02:25:33] -rw-rw-r-- 1 boinc boinc       620 Apr  3 02:25 runtime_log
[2025-04-03 02:25:33] -rw------- 1 boinc boinc   1925120 Apr  3 02:25 result.tar.gz
[2025-04-03 02:25:33] -rw------- 1 boinc boinc       657 Apr  3 02:25 w2ONDmvusJ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm81DLDmDk2JXm.diag
[2025-04-03 02:25:33] -rw-rw-r-- 1 boinc boinc     11429 Apr  3 02:25 runtime_log.err
[2025-04-03 02:25:33] -rw-rw-r-- 1 boinc boinc     21538 Apr  3 02:25 stderr.txt
[2025-04-03 02:25:33] HITS file was successfully produced:
[2025-04-03 02:25:33] -rw------- 1 boinc boinc 325210598 Apr  3 02:24 shared/HITS.pool.root.1
[2025-04-03 02:25:33]  *** Contents of shared directory: ***
[2025-04-03 02:25:33] total 674940
[2025-04-03 02:25:33] -rw-r--r-- 2 boinc boinc     17571 Apr  2 22:30 start_atlas.sh
[2025-04-03 02:25:33] -rw-r--r-- 2 boinc boinc    507247 Apr  2 22:30 input.tar.gz
[2025-04-03 02:25:33] -rw-r--r-- 2 boinc boinc 363462622 Apr  2 22:30 ATLAS.root_0
[2025-04-03 02:25:33] -rw------- 1 boinc boinc 325210598 Apr  3 02:24 HITS.pool.root.1
[2025-04-03 02:25:33] -rw------- 1 boinc boinc   1925120 Apr  3 02:25 result.tar.gz
02:25:34 (2699416): run_atlas exited; CPU time 81390.276279
02:25:34 (2699416): called boinc_finish(0)

</stderr_txt>
]]>

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