Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-03 05:15:45 (138404): Detected: vboxwrapper 26206
2025-04-03 05:15:45 (138404): Detected: BOINC client v8.0.2
2025-04-03 05:15:45 (138404): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-03 05:15:46 (138404): Successfully copied 'init_data.xml' to the shared directory.
2025-04-03 05:15:46 (138404): Create VM. (boinc_a7e6c653f205eaca, slot#5)
2025-04-03 05:15:47 (138404): Setting Memory Size for VM. (4400MB)
2025-04-03 05:15:47 (138404): Setting CPU Count for VM. (4)
2025-04-03 05:15:47 (138404): Setting Chipset Options for VM.
2025-04-03 05:15:47 (138404): Setting Graphics Controller Options for VM.
2025-04-03 05:15:48 (138404): Setting Boot Options for VM.
2025-04-03 05:15:48 (138404): Setting Network Configuration for NAT.
2025-04-03 05:15:48 (138404): Enabling VM Network Access.
2025-04-03 05:15:48 (138404): Disabling USB Support for VM.
2025-04-03 05:15:49 (138404): Disabling COM Port Support for VM.
2025-04-03 05:15:49 (138404): Disabling LPT Port Support for VM.
2025-04-03 05:15:49 (138404): Disabling Audio Support for VM.
2025-04-03 05:15:49 (138404): Disabling Clipboard Support for VM.
2025-04-03 05:15:50 (138404): Disabling Drag and Drop Support for VM.
2025-04-03 05:15:50 (138404): Adding storage controller(s) to VM.
2025-04-03 05:15:50 (138404): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-03 05:15:51 (138404): Adding VirtualBox Guest Additions to VM.
2025-04-03 05:15:51 (138404): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-03 05:15:51 (138404): forwarding host port 53348 to guest port 80
2025-04-03 05:15:51 (138404): Enabling remote desktop for VM.
2025-04-03 05:15:52 (138404): Required extension pack not installed, remote desktop not enabled.
2025-04-03 05:15:52 (138404): Enabling shared directory for VM.
2025-04-03 05:15:52 (138404): Starting VM using VBoxManage interface. (boinc_a7e6c653f205eaca, slot#5)
2025-04-03 05:15:57 (138404): Successfully started VM. (PID = '139196')
2025-04-03 05:15:57 (138404): Reporting VM Process ID to BOINC.
2025-04-03 05:15:57 (138404): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-03 05:15:57 (138404): Guest Log: CPUID EDX: 0x178bfbff
2025-04-03 05:15:57 (138404): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-03 05:15:57 (138404): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-03 05:15:57 (138404): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-03 05:15:57 (138404): Detected: Web Application Enabled (http://localhost:53348)
2025-04-03 05:15:57 (138404): Preference change detected
2025-04-03 05:15:57 (138404): Setting CPU throttle for VM. (100%)
2025-04-03 05:15:57 (138404): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-03 05:15:59 (138404): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-03 05:15:59 (138404): Guest Log: BIOS: Booting from Hard Disk...
2025-04-03 05:16:01 (138404): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-03 05:16:01 (138404): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-03 05:16:01 (138404): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-03 05:16:06 (138404): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-03 05:16:06 (138404): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-03 05:16:09 (138404): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-03 05:16:09 (138404): Guest Log: 00:00:00.000074 main     Log opened 2025-04-03T05:16:08.064898000Z
2025-04-03 05:16:09 (138404): Guest Log: 00:00:00.000159 main     OS Product: Linux
2025-04-03 05:16:09 (138404): Guest Log: 00:00:00.000173 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-03 05:16:09 (138404): Guest Log: 00:00:00.000185 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-03 05:16:09 (138404): Guest Log: 00:00:00.000197 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-03 05:16:09 (138404): Guest Log: 00:00:00.000197 main     Process ID: 1312
2025-04-03 05:16:09 (138404): Guest Log: 00:00:00.000198 main     Package type: LINUX_64BITS_GENERIC
2025-04-03 05:16:09 (138404): Guest Log: 00:00:00.000623 main     5.2.32 r132073 started. Verbose level = 0
2025-04-03 05:16:09 (138404): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-03 05:16:09 (138404): Guest Log: [INFO] Mounting shared directory
2025-04-03 05:16:09 (138404): Guest Log: [INFO] Checking for init_data.xml
2025-04-03 05:16:11 (138404): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-03 05:16:11 (138404): Guest Log: [INFO] Detected branch: prod
2025-04-03 05:16:11 (138404): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-03 05:16:11 (138404): Guest Log: Copying input files
2025-04-03 05:16:12 (138404): Guest Log: Copied input files into RunAtlas.
2025-04-03 05:16:12 (138404): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-03 05:16:12 (138404): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-03 05:16:12 (138404): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-03 05:16:12 (138404): Guest Log: Further information can be found at the LHC@home message board.
2025-04-03 05:16:19 (138404): Guest Log: 00:00:10.003827 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 789 174 651 000ns (GuestNow=1 743 646 578 891 473 000 ns GuestLast=1 743 657 368 066 124 000 ns fSetTimeLastLoop=true )
2025-04-03 05:16:23 (138404): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-03 05:16:23 (138404): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-03 05:16:23 (138404): Guest Log: 2.6.3.0 1588 0 30180 144429 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-03 05:16:23 (138404): Guest Log: copied the webapp to /var/www
2025-04-03 05:16:23 (138404): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-03 05:16:23 (138404): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-03 05:16:23 (138404): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-03 05:16:23 (138404): Guest Log:  *** Starting ATLAS job. (PandaID=6584886480 taskID=44004367) ***
2025-04-03 06:55:59 (138404): Status Report: Elapsed Time: '6000.000000'
2025-04-03 06:55:59 (138404): Status Report: CPU Time: '20682.921875'
2025-04-03 07:08:25 (138404): Guest Log:  *** Job finished ***
2025-04-03 07:08:25 (138404): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:33,314 | INFO     | [data] queue_monitor thread has finished
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:36,026 | INFO     | job.realtimelogging is not enabled
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:37,148 | INFO     | [payload] run_realtimelog thread has finished
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:37,738 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140560954824512)>', '<ExcThread(monitor, started 140559716972288)>']
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:38,156 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:38,156 | INFO     | [monitor] control thread has ended
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:42,800 | INFO     | all workflow threads have been joined
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:42,800 | INFO     | end of generic workflow (traces error code: 0)
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:42,801 | INFO     | traces error code: 0
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:42,801 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:42,861 [wrapper] ==== pilot stdout END ====
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:42,864 [wrapper] ==== wrapper stdout RESUME ====
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:42,867 [wrapper] pilotpid: 5897
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:42,870 [wrapper] Pilot exit status: 0
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:42,930 [wrapper] pandaids: 6584886480
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:42,948 [wrapper] cleanup supervisor_pilot  3964 5898
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:42,953 [wrapper] Test setup, not cleaning
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:42,956 [wrapper] apfmon messages muted
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:42,959 [wrapper] ==== wrapper stdout END ====
2025-04-03 07:08:25 (138404): Guest Log: 2025-04-03 04:13:42,962 [wrapper] ==== wrapper stderr END ====
2025-04-03 07:08:25 (138404): Guest Log:  *** Error codes and diagnostics ***
2025-04-03 07:08:25 (138404): Guest Log:     "exeErrorCode": 0,
2025-04-03 07:08:25 (138404): Guest Log:     "exeErrorDiag": "",
2025-04-03 07:08:25 (138404): Guest Log:     "pilotErrorCode": 0,
2025-04-03 07:08:25 (138404): Guest Log:     "pilotErrorDiag": "",
2025-04-03 07:08:25 (138404): Guest Log:  *** Listing of results directory ***
2025-04-03 07:08:25 (138404): Guest Log: total 200236
2025-04-03 07:08:25 (138404): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Apr  2 13:18 pilot3.tar.gz
2025-04-03 07:08:25 (138404): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Apr  2 13:21 queuedata.json
2025-04-03 07:08:25 (138404): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  2 13:22 runpilot2-wrapper.sh
2025-04-03 07:08:26 (138404): Guest Log: -rwxr-xr-x. 1 atlas atlas     12147 Apr  3 02:16 init_data.xml
2025-04-03 07:08:26 (138404): Guest Log: -rwxr-xr-x. 1 atlas atlas    507234 Apr  3 02:16 input.tar.gz
2025-04-03 07:08:26 (138404): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  3 02:16 start_atlas.sh
2025-04-03 07:08:26 (138404): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  3 02:16 EVNT.44004365._000041.pool.root.1 -> /data/./ATLAS.root_0
2025-04-03 07:08:26 (138404): Guest Log: -rw-r--r--. 1 atlas atlas      2549 Apr  3 02:16 pandaJob.out
2025-04-03 07:08:26 (138404): Guest Log: -rw-------. 1 atlas atlas       424 Apr  3 02:16 setup.sh.local
2025-04-03 07:08:26 (138404): Guest Log: -rw-------. 1 atlas atlas    991540 Apr  3 02:16 agis_schedconf.cvmfs.json
2025-04-03 07:08:26 (138404): Guest Log: -rw-------. 1 atlas atlas   1603449 Apr  3 02:17 agis_ddmendpoints.agis.ALL.json
2025-04-03 07:08:26 (138404): Guest Log: drwx------. 4 atlas atlas      4096 Apr  3 02:17 pilot3
2025-04-03 07:08:26 (138404): Guest Log: -rw-------. 1 atlas atlas        95 Apr  3 04:12 pilot_heartbeat.json
2025-04-03 07:08:26 (138404): Guest Log: -rw-------. 1 atlas atlas 199561579 Apr  3 04:12 HITS.44004367._001015.pool.root.1
2025-04-03 07:08:26 (138404): Guest Log: -rw-------. 1 atlas atlas      1026 Apr  3 04:13 memory_monitor_summary.json
2025-04-03 07:08:26 (138404): Guest Log: -rw-------. 1 atlas atlas    259687 Apr  3 04:13 log.44004367._001015.job.log.tgz.1
2025-04-03 07:08:26 (138404): Guest Log: -rw-------. 1 atlas atlas      7665 Apr  3 04:13 heartbeat.json
2025-04-03 07:08:26 (138404): Guest Log: -rw-------. 1 atlas atlas      4351 Apr  3 04:13 pilotlog.txt
2025-04-03 07:08:26 (138404): Guest Log: -rw-------. 1 atlas atlas    592066 Apr  3 04:13 log.44004367._001015.job.log.1
2025-04-03 07:08:26 (138404): Guest Log: -rw-------. 1 atlas atlas       357 Apr  3 04:13 output.list
2025-04-03 07:08:26 (138404): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  3 04:13 runtime_log
2025-04-03 07:08:26 (138404): Guest Log: -rw-------. 1 atlas atlas    870400 Apr  3 04:13 result.tar.gz
2025-04-03 07:08:26 (138404): Guest Log: -rw-------. 1 atlas atlas       657 Apr  3 04:13 TImNDmvDDK7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmrYFLDmKbmUgn.diag
2025-04-03 07:08:26 (138404): Guest Log: -rw-r--r--. 1 atlas atlas     10941 Apr  3 04:13 runtime_log.err
2025-04-03 07:08:26 (138404): Guest Log: Looking for outputfile HITS.44004367._001015.pool.root.1
2025-04-03 07:08:26 (138404): Guest Log: HITS file was successfully produced
2025-04-03 07:08:26 (138404): Guest Log: -rw-------. 1 atlas atlas 199561579 Apr  3 04:12 /home/atlas/RunAtlas/HITS.44004367._001015.pool.root.1
2025-04-03 07:08:26 (138404): Guest Log: Successfully finished the ATLAS job!
2025-04-03 07:08:26 (138404): Guest Log: Copying the results back to the shared directory!
2025-04-03 07:08:26 (138404): Guest Log:  *** Contents of shared directory: ***
2025-04-03 07:08:26 (138404): Guest Log: total 413272
2025-04-03 07:08:26 (138404): Guest Log: -rwxrwxrwx. 1 root root 222211260 Apr  3 02:15 ATLAS.root_0
2025-04-03 07:08:26 (138404): Guest Log: -rwxrwxrwx. 1 root root 199561579 Apr  3 04:08 HITS.pool.root.1
2025-04-03 07:08:26 (138404): Guest Log: -rwxrwxrwx. 1 root root     12147 Apr  3 02:15 init_data.xml
2025-04-03 07:08:26 (138404): Guest Log: -rwxrwxrwx. 1 root root    507234 Apr  2 17:54 input.tar.gz
2025-04-03 07:08:26 (138404): Guest Log: -rwxrwxrwx. 1 root root    870400 Apr  3 04:08 result.tar.gz
2025-04-03 07:08:26 (138404): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  2 17:54 start_atlas.sh
2025-04-03 07:08:26 (138404): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-03 07:08:26 (138404): VM Completion File Detected.
2025-04-03 07:08:26 (138404): Powering off VM.
2025-04-03 07:08:26 (138404): Successfully stopped VM.
2025-04-03 07:08:26 (138404): Deregistering VM. (boinc_a7e6c653f205eaca, slot#5)
2025-04-03 07:08:26 (138404): Removing network bandwidth throttle group from VM.
2025-04-03 07:08:26 (138404): Removing VM from VirtualBox.
07:08:32 (138404): called boinc_finish(0)

</stderr_txt>
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