Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-03 01:34:34 (6448): Detected: vboxwrapper 26206
2025-04-03 01:34:34 (6448): Detected: BOINC client v8.0.2
2025-04-03 01:34:34 (6448): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-03 01:34:35 (6448): Successfully copied 'init_data.xml' to the shared directory.
2025-04-03 01:34:35 (6448): Create VM. (boinc_0f3cec05ed04af29, slot#4)
2025-04-03 01:34:36 (6448): Setting Memory Size for VM. (4400MB)
2025-04-03 01:34:36 (6448): Setting CPU Count for VM. (4)
2025-04-03 01:34:36 (6448): Setting Chipset Options for VM.
2025-04-03 01:34:37 (6448): Setting Graphics Controller Options for VM.
2025-04-03 01:34:37 (6448): Setting Boot Options for VM.
2025-04-03 01:34:37 (6448): Setting Network Configuration for NAT.
2025-04-03 01:34:37 (6448): Enabling VM Network Access.
2025-04-03 01:34:38 (6448): Disabling USB Support for VM.
2025-04-03 01:34:38 (6448): Disabling COM Port Support for VM.
2025-04-03 01:34:38 (6448): Disabling LPT Port Support for VM.
2025-04-03 01:34:38 (6448): Disabling Audio Support for VM.
2025-04-03 01:34:39 (6448): Disabling Clipboard Support for VM.
2025-04-03 01:34:39 (6448): Disabling Drag and Drop Support for VM.
2025-04-03 01:34:39 (6448): Adding storage controller(s) to VM.
2025-04-03 01:34:39 (6448): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-03 01:34:43 (6448): Adding VirtualBox Guest Additions to VM.
2025-04-03 01:34:43 (6448): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-03 01:34:43 (6448): forwarding host port 55219 to guest port 80
2025-04-03 01:34:44 (6448): Enabling remote desktop for VM.
2025-04-03 01:34:44 (6448): Required extension pack not installed, remote desktop not enabled.
2025-04-03 01:34:44 (6448): Enabling shared directory for VM.
2025-04-03 01:34:44 (6448): Starting VM using VBoxManage interface. (boinc_0f3cec05ed04af29, slot#4)
2025-04-03 01:34:50 (6448): Successfully started VM. (PID = '17008')
2025-04-03 01:34:50 (6448): Reporting VM Process ID to BOINC.
2025-04-03 01:34:50 (6448): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-03 01:34:50 (6448): Guest Log: CPUID EDX: 0x178bfbff
2025-04-03 01:34:50 (6448): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-03 01:34:50 (6448): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-03 01:34:50 (6448): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-03 01:34:50 (6448): Detected: Web Application Enabled (http://localhost:55219)
2025-04-03 01:34:50 (6448): Preference change detected
2025-04-03 01:34:50 (6448): Setting CPU throttle for VM. (100%)
2025-04-03 01:34:50 (6448): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-03 01:34:52 (6448): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-03 01:34:53 (6448): Guest Log: BIOS: Booting from Hard Disk...
2025-04-03 01:34:55 (6448): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-03 01:34:55 (6448): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-03 01:34:55 (6448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-03 01:34:59 (6448): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-03 01:34:59 (6448): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-03 01:35:04 (6448): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-03 01:35:04 (6448): Guest Log: 00:00:00.000100 main     Log opened 2025-04-03T01:35:03.163976000Z
2025-04-03 01:35:04 (6448): Guest Log: 00:00:00.000169 main     OS Product: Linux
2025-04-03 01:35:04 (6448): Guest Log: 00:00:00.000211 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-03 01:35:04 (6448): Guest Log: 00:00:00.000229 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-03 01:35:04 (6448): Guest Log: 00:00:00.000245 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-03 01:35:04 (6448): Guest Log: 00:00:00.000245 main     Process ID: 1322
2025-04-03 01:35:04 (6448): Guest Log: 00:00:00.000245 main     Package type: LINUX_64BITS_GENERIC
2025-04-03 01:35:04 (6448): Guest Log: 00:00:00.000904 main     5.2.32 r132073 started. Verbose level = 0
2025-04-03 01:35:04 (6448): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-03 01:35:04 (6448): Guest Log: [INFO] Mounting shared directory
2025-04-03 01:35:04 (6448): Guest Log: [INFO] Checking for init_data.xml
2025-04-03 01:35:14 (6448): Guest Log: 00:00:10.004139 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 389 372 922 000ns (GuestNow=1 743 611 713 793 025 000 ns GuestLast=1 743 644 103 165 947 000 ns fSetTimeLastLoop=true )
2025-04-03 01:35:17 (6448): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-03 01:35:17 (6448): Guest Log: [INFO] Detected branch: prod
2025-04-03 01:35:18 (6448): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-03 01:35:18 (6448): Guest Log: Copying input files
2025-04-03 01:35:18 (6448): Guest Log: Copied input files into RunAtlas.
2025-04-03 01:35:18 (6448): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-03 01:35:18 (6448): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-03 01:35:18 (6448): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-03 01:35:18 (6448): Guest Log: Further information can be found at the LHC@home message board.
2025-04-03 01:35:31 (6448): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-03 01:35:31 (6448): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-03 01:35:31 (6448): Guest Log: 2.6.3.0 1603 0 32188 144415 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-03 01:35:32 (6448): Guest Log: copied the webapp to /var/www
2025-04-03 01:35:32 (6448): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-03 01:35:32 (6448): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-03 01:35:33 (6448): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-03 01:35:33 (6448): Guest Log:  *** Starting ATLAS job. (PandaID=6583648302 taskID=43634898) ***
2025-04-03 03:14:52 (6448): Status Report: Elapsed Time: '6000.000000'
2025-04-03 03:14:52 (6448): Status Report: CPU Time: '17245.453125'
2025-04-03 04:54:55 (6448): Status Report: Elapsed Time: '12000.000000'
2025-04-03 04:54:55 (6448): Status Report: CPU Time: '40775.281250'
2025-04-03 05:43:43 (6448): Guest Log:  *** Job finished ***
2025-04-03 05:43:43 (6448): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:29,078 | INFO     | [payload] validate_post thread has finished
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:29,315 | INFO     | [job] control thread has finished
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:30,846 | INFO     | [data] queue_monitor thread has finished
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:30,910 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140385407268672)>', '<ExcThread(monitor, started 140384680269568)>']
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:31,842 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:31,842 | INFO     | [monitor] control thread has ended
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:35,916 | INFO     | all workflow threads have been joined
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:35,916 | INFO     | end of generic workflow (traces error code: 0)
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:35,916 | INFO     | traces error code: 0
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:35,916 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:36,005 [wrapper] ==== pilot stdout END ====
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:36,008 [wrapper] ==== wrapper stdout RESUME ====
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:36,010 [wrapper] pilotpid: 5941
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:36,013 [wrapper] Pilot exit status: 0
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:36,163 [wrapper] pandaids: 6583648302
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:36,182 [wrapper] cleanup supervisor_pilot 15111 5942
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:36,185 [wrapper] Test setup, not cleaning
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:36,190 [wrapper] apfmon messages muted
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:36,192 [wrapper] ==== wrapper stdout END ====
2025-04-03 05:43:43 (6448): Guest Log: 2025-04-02 20:43:36,195 [wrapper] ==== wrapper stderr END ====
2025-04-03 05:43:43 (6448): Guest Log:  *** Error codes and diagnostics ***
2025-04-03 05:43:43 (6448): Guest Log:     "exeErrorCode": 0,
2025-04-03 05:43:43 (6448): Guest Log:     "exeErrorDiag": "",
2025-04-03 05:43:43 (6448): Guest Log:     "pilotErrorCode": 0,
2025-04-03 05:43:43 (6448): Guest Log:     "pilotErrorDiag": "",
2025-04-03 05:43:43 (6448): Guest Log:  *** Listing of results directory ***
2025-04-03 05:43:43 (6448): Guest Log: total 320712
2025-04-03 05:43:43 (6448): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  1 22:39 runpilot2-wrapper.sh
2025-04-03 05:43:43 (6448): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Apr  1 22:39 queuedata.json
2025-04-03 05:43:43 (6448): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Apr  1 22:39 pilot3.tar.gz
2025-04-03 05:43:43 (6448): Guest Log: -rwxr-xr-x. 1 atlas atlas      9213 Apr  2 16:35 init_data.xml
2025-04-03 05:43:43 (6448): Guest Log: -rwxr-xr-x. 1 atlas atlas    507237 Apr  2 16:35 input.tar.gz
2025-04-03 05:43:43 (6448): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  2 16:35 start_atlas.sh
2025-04-03 05:43:43 (6448): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  2 16:35 EVNT.43634896._000195.pool.root.1 -> /data/./ATLAS.root_0
2025-04-03 05:43:43 (6448): Guest Log: -rw-r--r--. 1 atlas atlas      2597 Apr  2 16:35 pandaJob.out
2025-04-03 05:43:43 (6448): Guest Log: -rw-------. 1 atlas atlas       424 Apr  2 16:35 setup.sh.local
2025-04-03 05:43:43 (6448): Guest Log: -rw-------. 1 atlas atlas    991498 Apr  2 16:39 agis_schedconf.cvmfs.json
2025-04-03 05:43:43 (6448): Guest Log: drwx------. 4 atlas atlas      4096 Apr  2 16:40 pilot3
2025-04-03 05:43:43 (6448): Guest Log: -rw-------. 1 atlas atlas 321165781 Apr  2 20:42 HITS.43634898._008607.pool.root.1
2025-04-03 05:43:43 (6448): Guest Log: -rw-------. 1 atlas atlas        95 Apr  2 20:42 pilot_heartbeat.json
2025-04-03 05:43:43 (6448): Guest Log: -rw-------. 1 atlas atlas      1031 Apr  2 20:43 memory_monitor_summary.json
2025-04-03 05:43:43 (6448): Guest Log: -rw-------. 1 atlas atlas   1603449 Apr  2 20:43 agis_ddmendpoints.agis.ALL.json
2025-04-03 05:43:43 (6448): Guest Log: -rw-------. 1 atlas atlas    323506 Apr  2 20:43 log.43634898._008607.job.log.tgz.1
2025-04-03 05:43:43 (6448): Guest Log: -rw-------. 1 atlas atlas      7714 Apr  2 20:43 heartbeat.json
2025-04-03 05:43:43 (6448): Guest Log: -rw-------. 1 atlas atlas      4279 Apr  2 20:43 pilotlog.txt
2025-04-03 05:43:43 (6448): Guest Log: -rw-------. 1 atlas atlas   1412927 Apr  2 20:43 log.43634898._008607.job.log.1
2025-04-03 05:43:43 (6448): Guest Log: -rw-------. 1 atlas atlas       357 Apr  2 20:43 output.list
2025-04-03 05:43:43 (6448): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  2 20:43 runtime_log
2025-04-03 05:43:43 (6448): Guest Log: -rw-------. 1 atlas atlas   1751040 Apr  2 20:43 result.tar.gz
2025-04-03 05:43:43 (6448): Guest Log: -rw-r--r--. 1 atlas atlas     10958 Apr  2 20:43 runtime_log.err
2025-04-03 05:43:43 (6448): Guest Log: -rw-------. 1 atlas atlas       663 Apr  2 20:43 Cq7NDmdRzJ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmjSrKDm6wglbn.diag
2025-04-03 05:43:43 (6448): Guest Log: Looking for outputfile HITS.43634898._008607.pool.root.1
2025-04-03 05:43:43 (6448): Guest Log: HITS file was successfully produced
2025-04-03 05:43:43 (6448): Guest Log: -rw-------. 1 atlas atlas 321165781 Apr  2 20:42 /home/atlas/RunAtlas/HITS.43634898._008607.pool.root.1
2025-04-03 05:43:44 (6448): Guest Log: Successfully finished the ATLAS job!
2025-04-03 05:43:44 (6448): Guest Log: Copying the results back to the shared directory!
2025-04-03 05:43:44 (6448): Guest Log:  *** Contents of shared directory: ***
2025-04-03 05:43:44 (6448): Guest Log: total 664832
2025-04-03 05:43:44 (6448): Guest Log: -rwxrwxrwx. 1 root root 357326512 Apr  2 16:34 ATLAS.root_0
2025-04-03 05:43:44 (6448): Guest Log: -rwxrwxrwx. 1 root root 321165781 Apr  2  2025 HITS.pool.root.1
2025-04-03 05:43:44 (6448): Guest Log: -rwxrwxrwx. 1 root root      9213 Apr  2 16:34 init_data.xml
2025-04-03 05:43:44 (6448): Guest Log: -rwxrwxrwx. 1 root root    507237 Apr  2 12:25 input.tar.gz
2025-04-03 05:43:44 (6448): Guest Log: -rwxrwxrwx. 1 root root   1751040 Apr  2  2025 result.tar.gz
2025-04-03 05:43:44 (6448): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  2 12:25 start_atlas.sh
2025-04-03 05:43:44 (6448): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-03 05:43:44 (6448): VM Completion File Detected.
2025-04-03 05:43:44 (6448): Powering off VM.
2025-04-03 05:43:44 (6448): Successfully stopped VM.
2025-04-03 05:43:44 (6448): Deregistering VM. (boinc_0f3cec05ed04af29, slot#4)
2025-04-03 05:43:44 (6448): Removing network bandwidth throttle group from VM.
2025-04-03 05:43:45 (6448): Removing VM from VirtualBox.
05:43:50 (6448): called boinc_finish(0)

</stderr_txt>
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