Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:23:59 (2840840): wrapper (7.7.26015): starting
20:23:59 (2840840): wrapper: running run_atlas (--nthreads 12)
[2025-04-03 20:23:59] Arguments: --nthreads 12
[2025-04-03 20:23:59] Threads: 12
[2025-04-03 20:23:59] Checking for CVMFS
[2025-04-03 20:23:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-03 20:23:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-03 20:23:59] Running cvmfs_config stat atlas.cern.ch
[2025-04-03 20:23:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-03 20:23:59] 2.12.7.0 65778 8126 97840 144461 1 55 32124307 46080000 921 130560 0 9397669 99.994 1307293 42877 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-03 20:23:59] CVMFS is ok
[2025-04-03 20:23:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-03 20:23:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-03 20:23:59] Further information can be found at the LHC@home message board.
[2025-04-03 20:23:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-03 20:23:59] Checking for apptainer binary...
[2025-04-03 20:23:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-03 20:23:59] Running /usr/bin/apptainer --version
[2025-04-03 20:23:59] apptainer version 1.3.6-1.el9
[2025-04-03 20:23:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-03 20:23:59] minis01.farm.particle.cz
[2025-04-03 20:23:59] apptainer works
[2025-04-03 20:23:59] Set ATHENA_PROC_NUMBER=12
[2025-04-03 20:23:59] Set ATHENA_CORE_NUMBER=12
[2025-04-03 20:23:59] Starting ATLAS job with PandaID=6583525564
[2025-04-03 20:23:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-03 21:58:25]  *** The last 200 lines of the pilot log: ***
[2025-04-03 21:58:25]  is_altstaged=None
[2025-04-03 21:58:25]  is_tar=False
[2025-04-03 21:58:25]  lfn=log.43634882._013053.job.log.tgz.1
[2025-04-03 21:58:25]  mtime=0
[2025-04-03 21:58:25]  protocol_id=None
[2025-04-03 21:58:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-03 21:58:25]  replicas=None
[2025-04-03 21:58:25]  scope=mc23_13p6TeV
[2025-04-03 21:58:25]  status=None
[2025-04-03 21:58:25]  status_code=0
[2025-04-03 21:58:25]  storage_token=
[2025-04-03 21:58:25]  surl=/scratch/.boinc/slots/2/PanDA_Pilot-6583525564/log.43634882._013053.job.log.tgz.1
[2025-04-03 21:58:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/b5/log.43634882._013053.job.log.tgz.1
[2025-04-03 21:58:25]  workdir=None
[2025-04-03 21:58:25] ]
[2025-04-03 21:58:25] 2025-04-03 19:57:59,123 | INFO     | transferring file log.43634882._013053.job.log.tgz.1 from /scratch/.boinc/slots/2/PanDA_Pilot-6583525564/log.43634882._013053.job.log.tgz.1 to /scratch/.boinc/slot
[2025-04-03 21:58:25] 2025-04-03 19:57:59,123 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/2/PanDA_Pilot-6583525564/log.43634882._013053.job.log.tgz.1 /scratch/.boinc/slots/2/log.43634882._013053.j
[2025-04-03 21:58:25] 2025-04-03 19:57:59,139 | INFO     | adding to output.list: log.43634882._013053.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d1/b5/log.43634882._013053.job.log.tg
[2025-04-03 21:58:25] 2025-04-03 19:57:59,140 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-03 21:58:25] 2025-04-03 19:57:59,140 | INFO     | summary of transferred files:
[2025-04-03 21:58:25] 2025-04-03 19:57:59,140 | INFO     |  -- lfn=log.43634882._013053.job.log.tgz.1, status_code=0, status=transferred
[2025-04-03 21:58:25] 2025-04-03 19:57:59,140 | INFO     | stage-out finished correctly
[2025-04-03 21:58:25] 2025-04-03 19:57:59,213 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-03 21:58:25] 2025-04-03 19:58:01,076 | WARNING  | process 2851909 can no longer be monitored (due to stat problems) - aborting
[2025-04-03 21:58:25] 2025-04-03 19:58:01,077 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6583525564/memory_monitor_summary.json (trf name=prmon)
[2025-04-03 21:58:25] 2025-04-03 19:58:01,139 | INFO     | number of running child processes to parent process 2851909: 1
[2025-04-03 21:58:25] 2025-04-03 19:58:01,140 | INFO     | maximum number of monitored processes: 6
[2025-04-03 21:58:25] 2025-04-03 19:58:01,302 | INFO     | PID=2844909 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-03 21:58:25] 2025-04-03 19:58:01,302 | INFO     | .. there are 2 such processes running
[2025-04-03 21:58:25] 2025-04-03 19:58:02,140 | INFO     | job 6583525564 has state=finished
[2025-04-03 21:58:25] 2025-04-03 19:58:02,140 | INFO     | preparing for final server update for job 6583525564 in state='finished'
[2025-04-03 21:58:25] 2025-04-03 19:58:02,141 | INFO     | this job has now completed (state=finished)
[2025-04-03 21:58:25] 2025-04-03 19:58:02,141 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-03 21:58:25] 2025-04-03 19:58:02,141 | INFO     | log transfer has been attempted: DONE
[2025-04-03 21:58:25] 2025-04-03 19:58:02,141 | INFO     | job 6583525564 has finished - writing final server update
[2025-04-03 21:58:25] 2025-04-03 19:58:02,141 | INFO     | total number of processed events: 400 (read)
[2025-04-03 21:58:25] 2025-04-03 19:58:02,144 | INFO     | executing command: lscpu
[2025-04-03 21:58:25] 2025-04-03 19:58:02,192 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-03 21:58:25] 2025-04-03 19:58:03,643 | INFO     | monitor loop #429: job 0:6583525564 is in state 'finished'
[2025-04-03 21:58:25] 2025-04-03 19:58:03,643 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-03 21:58:25] 2025-04-03 19:58:05,570 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-03 21:58:25] 2025-04-03 19:58:05,571 | INFO     | using path: /scratch/.boinc/slots/2/PanDA_Pilot-6583525564/memory_monitor_summary.json (trf name=prmon)
[2025-04-03 21:58:25] 2025-04-03 19:58:05,572 | INFO     | extracted standard info from prmon json
[2025-04-03 21:58:25] 2025-04-03 19:58:05,572 | INFO     | extracted standard memory fields from prmon json
[2025-04-03 21:58:25] 2025-04-03 19:58:05,572 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-03 21:58:25] 2025-04-03 19:58:05,572 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-03 21:58:25] 2025-04-03 19:58:05,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-03 21:58:25] 2025-04-03 19:58:05,575 | INFO     | fitting pss+swap vs Time
[2025-04-03 21:58:25] 2025-04-03 19:58:05,575 | INFO     | model: linear, x: [1743704976.0, 1743705037.0, 1743705098.0, 1743705159.0, 1743705220.0, 1743705281.0, 1743705342.0, 1743705403.0, 1743705464.0, 1743705525.0, 1743
[2025-04-03 21:58:25] 2025-04-03 19:58:05,575 | INFO     | sum of square deviations: 190403570.0
[2025-04-03 21:58:25] 2025-04-03 19:58:05,576 | INFO     | sum of deviations: 21479442182.999996
[2025-04-03 21:58:25] 2025-04-03 19:58:05,576 | INFO     | mean x: 1743707538.0
[2025-04-03 21:58:25] 2025-04-03 19:58:05,576 | INFO     | mean y: 2758120.682352941
[2025-04-03 21:58:25] 2025-04-03 19:58:05,576 | INFO     | -- intersect: -196705030743.42493
[2025-04-03 21:58:25] 2025-04-03 19:58:05,576 | INFO     | intersect: -196705030743.42493
[2025-04-03 21:58:25] 2025-04-03 19:58:05,576 | INFO     | chi2: 1.6812181177907926
[2025-04-03 21:58:25] 2025-04-03 19:58:05,577 | INFO     | -- intersect: -196705030743.42493
[2025-04-03 21:58:25] 2025-04-03 19:58:05,577 | INFO     | current memory leak: 112.81 B/s (using 85 data points, chi2=1.68)
[2025-04-03 21:58:25] 2025-04-03 19:58:05,577 | INFO     | ..............................
[2025-04-03 21:58:25] 2025-04-03 19:58:05,577 | INFO     | . Timing measurements:
[2025-04-03 21:58:25] 2025-04-03 19:58:05,577 | INFO     | . get job = 0 s
[2025-04-03 21:58:25] 2025-04-03 19:58:05,577 | INFO     | . initial setup = 1 s
[2025-04-03 21:58:25] 2025-04-03 19:58:05,578 | INFO     | . payload setup = 4 s
[2025-04-03 21:58:25] 2025-04-03 19:58:05,578 | INFO     | . stage-in = 0 s
[2025-04-03 21:58:25] 2025-04-03 19:58:05,578 | INFO     | . payload execution = 5608 s
[2025-04-03 21:58:25] 2025-04-03 19:58:05,578 | INFO     | . stage-out = 0 s
[2025-04-03 21:58:25] 2025-04-03 19:58:05,578 | INFO     | . log creation = 0 s
[2025-04-03 21:58:25] 2025-04-03 19:58:05,578 | INFO     | ..............................
[2025-04-03 21:58:25] 2025-04-03 19:58:05,797 | INFO     | 
[2025-04-03 21:58:25] 2025-04-03 19:58:05,798 | INFO     | job summary report
[2025-04-03 21:58:25] 2025-04-03 19:58:05,798 | INFO     | --------------------------------------------------
[2025-04-03 21:58:25] 2025-04-03 19:58:05,798 | INFO     | PanDA job id: 6583525564
[2025-04-03 21:58:25] 2025-04-03 19:58:05,798 | INFO     | task id: 43634882
[2025-04-03 21:58:25] 2025-04-03 19:58:05,798 | INFO     | errors: (none)
[2025-04-03 21:58:25] 2025-04-03 19:58:05,798 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-03 21:58:25] 2025-04-03 19:58:05,798 | INFO     | pilot state: finished 
[2025-04-03 21:58:25] 2025-04-03 19:58:05,798 | INFO     | transexitcode: 0
[2025-04-03 21:58:25] 2025-04-03 19:58:05,798 | INFO     | exeerrorcode: 0
[2025-04-03 21:58:25] 2025-04-03 19:58:05,799 | INFO     | exeerrordiag: 
[2025-04-03 21:58:25] 2025-04-03 19:58:05,799 | INFO     | exitcode: 0
[2025-04-03 21:58:25] 2025-04-03 19:58:05,799 | INFO     | exitmsg: OK
[2025-04-03 21:58:25] 2025-04-03 19:58:05,799 | INFO     | cpuconsumptiontime: 55947 s
[2025-04-03 21:58:25] 2025-04-03 19:58:05,799 | INFO     | nevents: 400
[2025-04-03 21:58:25] 2025-04-03 19:58:05,799 | INFO     | neventsw: 0
[2025-04-03 21:58:25] 2025-04-03 19:58:05,799 | INFO     | pid: 2851909
[2025-04-03 21:58:25] 2025-04-03 19:58:05,799 | INFO     | pgrp: 2851909
[2025-04-03 21:58:25] 2025-04-03 19:58:05,799 | INFO     | corecount: 12
[2025-04-03 21:58:25] 2025-04-03 19:58:05,800 | INFO     | event service: False
[2025-04-03 21:58:25] 2025-04-03 19:58:05,800 | INFO     | sizes: {0: 2417196, 1: 2417395, 4: 2417601, 11: 2417629, 5616: 2444247, 5617: 2453374, 5623: 2453488}
[2025-04-03 21:58:25] 2025-04-03 19:58:05,800 | INFO     | --------------------------------------------------
[2025-04-03 21:58:25] 2025-04-03 19:58:05,800 | INFO     | 
[2025-04-03 21:58:25] 2025-04-03 19:58:05,800 | INFO     | executing command: ls -lF /scratch/.boinc/slots/2
[2025-04-03 21:58:25] 2025-04-03 19:58:05,817 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,817 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,817 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,817 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,818 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,818 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,818 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,818 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,818 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,818 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,818 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,819 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,819 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,819 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,819 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,819 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,819 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-03 21:58:25] 2025-04-03 19:58:05,819 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,819 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-03 21:58:25] 2025-04-03 19:58:05,819 | INFO     | job 6583525564 has completed (purged errors)
[2025-04-03 21:58:25] 2025-04-03 19:58:05,820 | INFO     | overall cleanup function is called
[2025-04-03 21:58:25] 2025-04-03 19:58:06,829 | INFO     | --- collectZombieJob: --- 10, [2851909]
[2025-04-03 21:58:25] 2025-04-03 19:58:06,829 | INFO     | zombie collector waiting for pid 2851909
[2025-04-03 21:58:25] 2025-04-03 19:58:06,830 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-03 21:58:25] 2025-04-03 19:58:06,830 | INFO     | collected zombie processes
[2025-04-03 21:58:25] 2025-04-03 19:58:06,830 | INFO     | will attempt to kill all subprocesses of pid=2851909
[2025-04-03 21:58:25] 2025-04-03 19:58:06,894 | INFO     | process IDs to be killed: [2851909] (in reverse order)
[2025-04-03 21:58:25] 2025-04-03 19:58:06,942 | WARNING  | found no corresponding commands to process id(s)
[2025-04-03 21:58:25] 2025-04-03 19:58:06,942 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-03 21:58:25] 2025-04-03 19:58:06,948 | INFO     | did not find any defunct processes belonging to 2851909
[2025-04-03 21:58:25] 2025-04-03 19:58:06,952 | INFO     | did not find any defunct processes belonging to 2851909
[2025-04-03 21:58:25] 2025-04-03 19:58:06,953 | INFO     | ready for new job
[2025-04-03 21:58:25] 2025-04-03 19:58:06,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-03 21:58:25] 2025-04-03 19:58:06,954 | INFO     | ***************************************
[2025-04-03 21:58:25] 2025-04-03 19:58:06,954 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-03 21:58:25] 2025-04-03 19:58:06,955 | INFO     | ***************************************
[2025-04-03 21:58:25] 2025-04-03 19:58:06,955 | INFO     | 
[2025-04-03 21:58:25] 2025-04-03 19:58:06,956 | INFO     | architecture information:
[2025-04-03 21:58:25] 2025-04-03 19:58:06,956 | INFO     | executing command: cat /etc/os-release
[2025-04-03 21:58:25] 2025-04-03 19:58:06,968 | INFO     | cat /etc/os-release:
[2025-04-03 21:58:25] NAME="CentOS Linux"
[2025-04-03 21:58:25] VERSION="7 (Core)"
[2025-04-03 21:58:25] ID="centos"
[2025-04-03 21:58:25] ID_LIKE="rhel fedora"
[2025-04-03 21:58:25] VERSION_ID="7"
[2025-04-03 21:58:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-03 21:58:25] ANSI_COLOR="0;31"
[2025-04-03 21:58:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-03 21:58:25] HOME_URL="https://www.centos.org/"
[2025-04-03 21:58:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-03 21:58:25] 
[2025-04-03 21:58:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-03 21:58:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-03 21:58:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-03 21:58:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-03 21:58:25] 
[2025-04-03 21:58:25] 2025-04-03 19:58:06,968 | INFO     | ***************************************
[2025-04-03 21:58:25] 2025-04-03 19:58:07,471 | INFO     | executing command: df -mP /scratch/.boinc/slots/2
[2025-04-03 21:58:25] 2025-04-03 19:58:07,486 | INFO     | sufficient remaining disk space (705298432000 B)
[2025-04-03 21:58:25] 2025-04-03 19:58:07,486 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-03 21:58:25] 2025-04-03 19:58:07,486 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-03 21:58:25] 2025-04-03 19:58:07,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-03 21:58:25] 2025-04-03 19:58:07,487 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-03 21:58:25] 2025-04-03 19:58:07,487 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-03 21:58:25] 2025-04-03 19:58:07,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-03 21:58:25] 2025-04-03 19:58:07,487 | INFO     | found 0 job(s) in 20 queues
[2025-04-03 21:58:25] 2025-04-03 19:58:07,488 | INFO     | aborting loop
[2025-04-03 21:58:25] 2025-04-03 19:58:07,488 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-03 21:58:25] 2025-04-03 19:58:07,488 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-03 21:58:25] 2025-04-03 19:58:08,268 | INFO     | all job control threads have been joined
[2025-04-03 21:58:25] 2025-04-03 19:58:08,492 | INFO     | [job] retrieve thread has finished
[2025-04-03 21:58:25] 2025-04-03 19:58:08,492 | INFO     | [job] queue monitor thread has finished
[2025-04-03 21:58:25] 2025-04-03 19:58:08,493 | INFO     | [job] job monitor thread has finished
[2025-04-03 21:58:25] 2025-04-03 19:58:08,555 | INFO     | all payload control threads have been joined
[2025-04-03 21:58:25] 2025-04-03 19:58:08,581 | INFO     | all data control threads have been joined
[2025-04-03 21:58:25] 2025-04-03 19:58:08,584 | INFO     | [job] create_data_payload thread has finished
[2025-04-03 21:58:25] 2025-04-03 19:58:08,677 | INFO     | [payload] validate_pre thread has finished
[2025-04-03 21:58:25] 2025-04-03 19:58:09,040 | INFO     | [payload] validate_post thread has finished
[2025-04-03 21:58:25] 2025-04-03 19:58:09,043 | INFO     | [data] copytool_in thread has finished
[2025-04-03 21:58:25] 2025-04-03 19:58:09,274 | INFO     | [job] control thread has finished
[2025-04-03 21:58:25] 2025-04-03 19:58:09,493 | INFO     | [data] copytool_out thread has finished
[2025-04-03 21:58:25] 2025-04-03 19:58:09,561 | INFO     | [payload] control thread has finished
[2025-04-03 21:58:25] 2025-04-03 19:58:09,587 | INFO     | [data] control thread has finished
[2025-04-03 21:58:25] 2025-04-03 19:58:09,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-03 21:58:25] 2025-04-03 19:58:09,868 | INFO     | [payload] execute_payloads thread has finished
[2025-04-03 21:58:25] 2025-04-03 19:58:09,953 | INFO     | [job] validate thread has finished
[2025-04-03 21:58:25] 2025-04-03 19:58:09,955 | INFO     | [payload] failed_post thread has finished
[2025-04-03 21:58:25] 2025-04-03 19:58:13,808 | INFO     | [data] queue_monitor thread has finished
[2025-04-03 21:58:25] 2025-04-03 19:58:17,601 | INFO     | job.realtimelogging is not enabled
[2025-04-03 21:58:25] 2025-04-03 19:58:18,606 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-03 21:58:25] 2025-04-03 19:58:19,931 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139969794103104)>', '<ExcThread(monitor, started 139969091860224)>']
[2025-04-03 21:58:25] 2025-04-03 19:58:20,552 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-03 21:58:25] 2025-04-03 19:58:20,552 | INFO     | [monitor] control thread has ended
[2025-04-03 21:58:25] 2025-04-03 19:58:24,957 | INFO     | all workflow threads have been joined
[2025-04-03 21:58:25] 2025-04-03 19:58:24,957 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-03 21:58:25] 2025-04-03 19:58:24,958 | INFO     | traces error code: 0
[2025-04-03 21:58:25] 2025-04-03 19:58:24,958 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-03 21:58:25] 2025-04-03 19:58:25,060 [wrapper] ==== pilot stdout END ====
[2025-04-03 21:58:25] 2025-04-03 19:58:25,063 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-03 21:58:25] 2025-04-03 19:58:25,066 [wrapper] pilotpid: 2844909
[2025-04-03 21:58:25] 2025-04-03 19:58:25,068 [wrapper] Pilot exit status: 0
[2025-04-03 21:58:25] 2025-04-03 19:58:25,078 [wrapper] pandaids: 6583525564
[2025-04-03 21:58:25] 2025-04-03 19:58:25,111 [wrapper] cleanup supervisor_pilot 2939356 2844910
[2025-04-03 21:58:25] 2025-04-03 19:58:25,114 [wrapper] Test setup, not cleaning
[2025-04-03 21:58:25] 2025-04-03 19:58:25,117 [wrapper] apfmon messages muted
[2025-04-03 21:58:25] 2025-04-03 19:58:25,119 [wrapper] ==== wrapper stdout END ====
[2025-04-03 21:58:25] 2025-04-03 19:58:25,121 [wrapper] ==== wrapper stderr END ====
[2025-04-03 21:58:25]  *** Error codes and diagnostics ***
[2025-04-03 21:58:25]     "exeErrorCode": 0,
[2025-04-03 21:58:25]     "exeErrorDiag": "",
[2025-04-03 21:58:25]     "pilotErrorCode": 0,
[2025-04-03 21:58:25]     "pilotErrorDiag": "",
[2025-04-03 21:58:25]  *** Listing of results directory ***
[2025-04-03 21:58:25] total 629684
[2025-04-03 21:58:25] -rw-r--r-- 1 boinc boinc    494584 Apr  1 23:51 pilot3.tar.gz
[2025-04-03 21:58:25] -rw-r--r-- 1 boinc boinc      5112 Apr  1 23:54 queuedata.json
[2025-04-03 21:58:25] -rwx------ 1 boinc boinc     37140 Apr  1 23:54 runpilot2-wrapper.sh
[2025-04-03 21:58:25] -rw-r--r-- 1 boinc boinc       100 Apr  3 20:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-03 21:58:25] -rwxr-xr-x 1 boinc boinc      7986 Apr  3 20:23 run_atlas
[2025-04-03 21:58:25] -rw-r--r-- 1 boinc boinc       105 Apr  3 20:23 job.xml
[2025-04-03 21:58:25] -rw-r--r-- 1 boinc boinc      6524 Apr  3 20:23 init_data.xml
[2025-04-03 21:58:25] -rw-r--r-- 2 boinc boinc 343906521 Apr  3 20:23 EVNT.43634880._000730.pool.root.1
[2025-04-03 21:58:25] -rw-r--r-- 2 boinc boinc     17571 Apr  3 20:23 start_atlas.sh
[2025-04-03 21:58:25] drwxrwx--x 2 boinc boinc      4096 Apr  3 20:23 shared
[2025-04-03 21:58:25] -rw-r--r-- 2 boinc boinc    507267 Apr  3 20:23 input.tar.gz
[2025-04-03 21:58:25] -rw-r--r-- 1 boinc boinc         0 Apr  3 20:23 boinc_lockfile
[2025-04-03 21:58:25] -rw-r--r-- 1 boinc boinc      2618 Apr  3 20:23 pandaJob.out
[2025-04-03 21:58:25] -rw------- 1 boinc boinc       424 Apr  3 20:24 setup.sh.local
[2025-04-03 21:58:25] -rw------- 1 boinc boinc    979976 Apr  3 20:24 agis_schedconf.cvmfs.json
[2025-04-03 21:58:25] -rw------- 1 boinc boinc   1603525 Apr  3 20:24 agis_ddmendpoints.agis.ALL.json
[2025-04-03 21:58:25] drwx------ 4 boinc boinc      4096 Apr  3 20:24 pilot3
[2025-04-03 21:58:25] -rw------- 1 boinc boinc        95 Apr  3 21:57 pilot_heartbeat.json
[2025-04-03 21:58:25] -rw------- 1 boinc boinc 295189722 Apr  3 21:57 HITS.43634882._013053.pool.root.1
[2025-04-03 21:58:25] -rw-r--r-- 1 boinc boinc       530 Apr  3 21:57 boinc_task_state.xml
[2025-04-03 21:58:25] -rw------- 1 boinc boinc      1016 Apr  3 21:57 memory_monitor_summary.json
[2025-04-03 21:58:25] -rw------- 1 boinc boinc    375302 Apr  3 21:57 log.43634882._013053.job.log.tgz.1
[2025-04-03 21:58:25] -rw------- 1 boinc boinc      7686 Apr  3 21:58 heartbeat.json
[2025-04-03 21:58:25] -rw-r--r-- 1 boinc boinc        27 Apr  3 21:58 wrapper_checkpoint.txt
[2025-04-03 21:58:25] -rw-r--r-- 1 boinc boinc      8192 Apr  3 21:58 boinc_mmap_file
[2025-04-03 21:58:25] -rw------- 1 boinc boinc      4416 Apr  3 21:58 pilotlog.txt
[2025-04-03 21:58:25] -rw------- 1 boinc boinc    557616 Apr  3 21:58 log.43634882._013053.job.log.1
[2025-04-03 21:58:25] -rw------- 1 boinc boinc       357 Apr  3 21:58 output.list
[2025-04-03 21:58:25] -rw-r--r-- 1 boinc boinc       620 Apr  3 21:58 runtime_log
[2025-04-03 21:58:25] -rw------- 1 boinc boinc    952320 Apr  3 21:58 result.tar.gz
[2025-04-03 21:58:25] -rw-r--r-- 1 boinc boinc     11079 Apr  3 21:58 runtime_log.err
[2025-04-03 21:58:25] -rw------- 1 boinc boinc       662 Apr  3 21:58 czGLDmtjyJ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmIUELDmbr54zn.diag
[2025-04-03 21:58:25] -rw-r--r-- 1 boinc boinc     21676 Apr  3 21:58 stderr.txt
[2025-04-03 21:58:25] HITS file was successfully produced:
[2025-04-03 21:58:25] -rw------- 1 boinc boinc 295189722 Apr  3 21:57 shared/HITS.pool.root.1
[2025-04-03 21:58:25]  *** Contents of shared directory: ***
[2025-04-03 21:58:25] total 625576
[2025-04-03 21:58:25] -rw-r--r-- 2 boinc boinc 343906521 Apr  3 20:23 ATLAS.root_0
[2025-04-03 21:58:25] -rw-r--r-- 2 boinc boinc     17571 Apr  3 20:23 start_atlas.sh
[2025-04-03 21:58:25] -rw-r--r-- 2 boinc boinc    507267 Apr  3 20:23 input.tar.gz
[2025-04-03 21:58:25] -rw------- 1 boinc boinc 295189722 Apr  3 21:57 HITS.pool.root.1
[2025-04-03 21:58:25] -rw------- 1 boinc boinc    952320 Apr  3 21:58 result.tar.gz
21:58:26 (2840840): run_atlas exited; CPU time 55915.790076
21:58:26 (2840840): called boinc_finish(0)

</stderr_txt>
]]>

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