Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-02 19:46:12 (83110): Detected: vboxwrapper 26206
2025-04-02 19:46:12 (83110): Detected: BOINC client v8.0.4
2025-04-02 19:46:12 (83110): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-04-02 19:46:12 (83110): Successfully copied 'init_data.xml' to the shared directory.
2025-04-02 19:46:12 (83110): Create VM. (boinc_73aea7d3d38e9f0b, slot#4)
2025-04-02 19:46:12 (83110): Setting Memory Size for VM. (4600MB)
2025-04-02 19:46:12 (83110): Setting CPU Count for VM. (6)
2025-04-02 19:46:13 (83110): Setting Chipset Options for VM.
2025-04-02 19:46:13 (83110): Setting Graphics Controller Options for VM.
2025-04-02 19:46:13 (83110): Setting Boot Options for VM.
2025-04-02 19:46:13 (83110): Setting Network Configuration for NAT.
2025-04-02 19:46:13 (83110): Enabling VM Network Access.
2025-04-02 19:46:13 (83110): Disabling USB Support for VM.
2025-04-02 19:46:13 (83110): Disabling COM Port Support for VM.
2025-04-02 19:46:13 (83110): Disabling LPT Port Support for VM.
2025-04-02 19:46:13 (83110): Disabling Audio Support for VM.
2025-04-02 19:46:13 (83110): Disabling Clipboard Support for VM.
2025-04-02 19:46:13 (83110): Disabling Drag and Drop Support for VM.
2025-04-02 19:46:13 (83110): Adding storage controller(s) to VM.
2025-04-02 19:46:13 (83110): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-02 19:46:15 (83110): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-02 19:46:15 (83110): forwarding host port 40677 to guest port 80
2025-04-02 19:46:15 (83110): Enabling remote desktop for VM.
2025-04-02 19:46:15 (83110): Enabling shared directory for VM.
2025-04-02 19:46:15 (83110): Starting VM using VBoxManage interface. (boinc_73aea7d3d38e9f0b, slot#4)
2025-04-02 19:46:17 (83110): Successfully started VM. (PID = '83586')
2025-04-02 19:46:17 (83110): Reporting VM Process ID to BOINC.
2025-04-02 19:46:17 (83110): Guest Log: BIOS: VirtualBox 7.0.20
2025-04-02 19:46:17 (83110): Guest Log: CPUID EDX: 0x178bfbff
2025-04-02 19:46:17 (83110): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-02 19:46:17 (83110): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-02 19:46:17 (83110): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-02 19:46:17 (83110): Detected: Web Application Enabled (http://localhost:40677)
2025-04-02 19:46:17 (83110): Detected: Remote Desktop Enabled (localhost:41767)
2025-04-02 19:46:17 (83110): Preference change detected
2025-04-02 19:46:17 (83110): Setting CPU throttle for VM. (50%)
2025-04-02 19:46:17 (83110): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-02 19:46:19 (83110): VM state change detected. (old = 'running', new = 'paused')
2025-04-02 19:46:39 (83110): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-02 19:46:39 (83110): Guest Log: BIOS: Booting from Hard Disk...
2025-04-02 19:46:39 (83110): VM state change detected. (old = 'paused', new = 'running')
2025-04-02 19:46:45 (83110): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-02 19:46:45 (83110): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-02 19:46:45 (83110): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-02 19:46:59 (83110): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-02 19:46:59 (83110): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-02 19:47:15 (83110): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-02 19:47:15 (83110): Guest Log: 00:00:00.000163 main     Log opened 2025-04-02T10:46:53.832936000Z
2025-04-02 19:47:15 (83110): Guest Log: 00:00:00.000273 main     OS Product: Linux
2025-04-02 19:47:15 (83110): Guest Log: 00:00:00.000310 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-02 19:47:15 (83110): Guest Log: 00:00:00.000341 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-02 19:47:15 (83110): Guest Log: 00:00:00.000392 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-02 19:47:15 (83110): Guest Log: 00:00:00.000393 main     Process ID: 1325
2025-04-02 19:47:15 (83110): Guest Log: 00:00:00.000393 main     Package type: LINUX_64BITS_GENERIC
2025-04-02 19:47:15 (83110): Guest Log: 00:00:00.002562 main     5.2.32 r132073 started. Verbose level = 0
2025-04-02 19:47:16 (83110): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-02 19:47:16 (83110): Guest Log: [INFO] Mounting shared directory
2025-04-02 19:47:16 (83110): Guest Log: [INFO] Checking for init_data.xml
2025-04-02 19:47:25 (83110): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-02 19:47:25 (83110): Guest Log: [INFO] Detected branch: prod
2025-04-02 19:47:25 (83110): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-02 19:47:25 (83110): Guest Log: Copying input files
2025-04-02 19:47:33 (83110): Guest Log: Copied input files into RunAtlas.
2025-04-02 19:47:33 (83110): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-02 19:47:33 (83110): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-02 19:47:33 (83110): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-02 19:47:33 (83110): Guest Log: Further information can be found at the LHC@home message board.
2025-04-02 19:47:44 (83110): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-02 19:47:45 (83110): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-02 19:47:45 (83110): Guest Log: 2.6.3.0 1623 0 32204 144404 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-02 19:47:48 (83110): Guest Log: copied the webapp to /var/www
2025-04-02 19:47:48 (83110): Guest Log: ATHENA_PROC_NUMBER=6
2025-04-02 19:47:48 (83110): Guest Log: ATHENA_CORE_NUMBER=6
2025-04-02 19:47:48 (83110): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-02 19:47:48 (83110): Guest Log:  *** Starting ATLAS job. (PandaID=6582531071 taskID=43634898) ***
2025-04-02 19:55:39 (83110): Guest Log:  *** Job finished ***
2025-04-02 19:55:39 (83110): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:06,099 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:07,124 | INFO     | [job] queue monitor thread has finished
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:08,507 | INFO     | [data] queue_monitor thread has finished
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:10,316 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140101593155392)>', '<ExcThread(monitor, started 140100558124800)>']
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:11,157 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:11,158 | INFO     | [monitor] control thread has ended
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:15,345 | INFO     | all workflow threads have been joined
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:15,345 | INFO     | end of generic workflow (traces error code: 0)
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:15,346 | INFO     | traces error code: 0
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:15,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:15,608 [wrapper] ==== pilot stdout END ====
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:15,623 [wrapper] ==== wrapper stdout RESUME ====
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:15,637 [wrapper] pilotpid: 5963
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:15,651 [wrapper] Pilot exit status: 0
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:15,758 [wrapper] pandaids: 6582531071
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:15,873 [wrapper] cleanup supervisor_pilot  5969 5964
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:15,889 [wrapper] Test setup, not cleaning
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:15,907 [wrapper] apfmon messages muted
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:15,921 [wrapper] ==== wrapper stdout END ====
2025-04-02 19:55:39 (83110): Guest Log: 2025-04-02 10:55:15,935 [wrapper] ==== wrapper stderr END ====
2025-04-02 19:55:39 (83110): Guest Log:  *** Error codes and diagnostics ***
2025-04-02 19:55:39 (83110): Guest Log:     "exeErrorCode": 65,
2025-04-02 19:55:39 (83110): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-04-02 19:55:39 (83110): Guest Log:     "pilotErrorCode": 1305,
2025-04-02 19:55:39 (83110): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-04-02 19:55:39 (83110): Guest Log:  *** Listing of results directory ***
2025-04-02 19:55:39 (83110): Guest Log: total 3884
2025-04-02 19:55:39 (83110): Guest Log: -rw-r--r--. 1 atlas atlas  494584 Apr  1 15:11 pilot3.tar.gz
2025-04-02 19:55:39 (83110): Guest Log: -rwx------. 1 atlas atlas   37140 Apr  1 15:19 runpilot2-wrapper.sh
2025-04-02 19:55:39 (83110): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Apr  1 15:19 queuedata.json
2025-04-02 19:55:39 (83110): Guest Log: -rw-r--r--. 1 atlas atlas  507240 Apr  2 10:47 input.tar.gz
2025-04-02 19:55:39 (83110): Guest Log: -rw-r--r--. 1 atlas atlas    6472 Apr  2 10:47 init_data.xml
2025-04-02 19:55:39 (83110): Guest Log: -rw-r--r--. 1 atlas atlas   17571 Apr  2 10:47 start_atlas.sh
2025-04-02 19:55:39 (83110): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr  2 10:47 EVNT.43634896._000085.pool.root.1 -> /data/./ATLAS.root_0
2025-04-02 19:55:39 (83110): Guest Log: -rw-r--r--. 1 atlas atlas    2595 Apr  2 10:47 pandaJob.out
2025-04-02 19:55:39 (83110): Guest Log: -rw-------. 1 atlas atlas     424 Apr  2 10:47 setup.sh.local
2025-04-02 19:55:39 (83110): Guest Log: -rw-------. 1 atlas atlas  989885 Apr  2 10:48 agis_schedconf.cvmfs.json
2025-04-02 19:55:39 (83110): Guest Log: -rw-------. 1 atlas atlas 1599134 Apr  2 10:48 agis_ddmendpoints.agis.ALL.json
2025-04-02 19:55:39 (83110): Guest Log: drwx------. 4 atlas atlas    4096 Apr  2 10:48 pilot3
2025-04-02 19:55:39 (83110): Guest Log: -rw-------. 1 atlas atlas    1014 Apr  2 10:52 memory_monitor_summary.json
2025-04-02 19:55:39 (83110): Guest Log: -rw-------. 1 atlas atlas   21544 Apr  2 10:52 log.43634898._005838.job.log.tgz.1
2025-04-02 19:55:39 (83110): Guest Log: -rw-------. 1 atlas atlas      95 Apr  2 10:54 pilot_heartbeat.json
2025-04-02 19:55:39 (83110): Guest Log: -rw-------. 1 atlas atlas    8400 Apr  2 10:55 heartbeat.json
2025-04-02 19:55:39 (83110): Guest Log: -rw-------. 1 atlas atlas    4279 Apr  2 10:55 pilotlog.txt
2025-04-02 19:55:39 (83110): Guest Log: -rw-------. 1 atlas atlas   86498 Apr  2 10:55 log.43634898._005838.job.log.1
2025-04-02 19:55:39 (83110): Guest Log: -rw-------. 1 atlas atlas     188 Apr  2 10:55 output.list
2025-04-02 19:55:39 (83110): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr  2 10:55 runtime_log
2025-04-02 19:55:39 (83110): Guest Log: -rw-------. 1 atlas atlas  122880 Apr  2 10:55 result.tar.gz
2025-04-02 19:55:39 (83110): Guest Log: -rw-------. 1 atlas atlas     641 Apr  2 10:55 XwgLDmjZsJ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmE0DLDmBxxJon.diag
2025-04-02 19:55:39 (83110): Guest Log: -rw-r--r--. 1 atlas atlas   10786 Apr  2 10:55 runtime_log.err
2025-04-02 19:55:39 (83110): Guest Log: Looking for outputfile HITS.43634898._005838.pool.root.1
2025-04-02 19:55:39 (83110): Guest Log: No HITS file was produced
2025-04-02 19:55:39 (83110): Guest Log: Successfully finished the ATLAS job!
2025-04-02 19:55:39 (83110): Guest Log: Copying the results back to the shared directory!
2025-04-02 19:55:39 (83110): Guest Log:  *** Contents of shared directory: ***
2025-04-02 19:55:39 (83110): Guest Log: total 350124
2025-04-02 19:55:39 (83110): Guest Log: -rw-r--r--. 1 root root 357862599 Apr  2 10:46 ATLAS.root_0
2025-04-02 19:55:39 (83110): Guest Log: -rw-r--r--. 1 root root      6472 Apr  2 10:46 init_data.xml
2025-04-02 19:55:39 (83110): Guest Log: -rw-r--r--. 1 root root    507240 Apr  2 10:46 input.tar.gz
2025-04-02 19:55:39 (83110): Guest Log: -rw-r--r--. 1 root root    122880 Apr  2  2025 result.tar.gz
2025-04-02 19:55:40 (83110): Guest Log: -rw-r--r--. 1 root root     17571 Apr  2 10:46 start_atlas.sh
2025-04-02 19:55:40 (83110): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-02 19:55:40 (83110): VM Completion File Detected.
2025-04-02 19:55:40 (83110): Powering off VM.
2025-04-02 19:55:40 (83110): Successfully stopped VM.
2025-04-02 19:55:40 (83110): Deregistering VM. (boinc_73aea7d3d38e9f0b, slot#4)
2025-04-02 19:55:41 (83110): Removing network bandwidth throttle group from VM.
2025-04-02 19:55:41 (83110): Removing VM from VirtualBox.
19:55:46 (83110): called boinc_finish(0)

</stderr_txt>
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