Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
06:13:47 (23966): wrapper (7.7.26015): starting
06:13:47 (23966): wrapper: running run_atlas (--nthreads 12)
[2025-04-02 06:13:47] Arguments: --nthreads 12
[2025-04-02 06:13:47] Threads: 12
[2025-04-02 06:13:47] Checking for CVMFS
[2025-04-02 06:13:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-02 06:13:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-02 06:13:48] Running cvmfs_config stat atlas.cern.ch
[2025-04-02 06:13:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-02 06:13:48] 2.10.0.0 17150 1362 90344 144405 0 61 7266501 16777216 928 130560 0 3606240 99.997 355952 7199 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-04-02 06:13:48] CVMFS is ok
[2025-04-02 06:13:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-02 06:13:48] Checking for apptainer binary...
[2025-04-02 06:13:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-02 06:13:48] Running /usr/bin/apptainer --version
[2025-04-02 06:13:48] apptainer version 1.3.6-150600.4.9.1
[2025-04-02 06:13:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-02 06:13:48] boinc-runner
[2025-04-02 06:13:48] apptainer works
[2025-04-02 06:13:48] Set ATHENA_PROC_NUMBER=12
[2025-04-02 06:13:48] Set ATHENA_CORE_NUMBER=12
[2025-04-02 06:13:48] Starting ATLAS job with PandaID=6583648661
[2025-04-02 06:13:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-02 07:02:27]  *** The last 200 lines of the pilot log: ***
[2025-04-02 07:02:27]  lfn=log.43634898._008901.job.log.tgz.1
[2025-04-02 07:02:27]  mtime=0
[2025-04-02 07:02:27]  protocol_id=None
[2025-04-02 07:02:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-02 07:02:27]  replicas=None
[2025-04-02 07:02:27]  scope=mc23_13p6TeV
[2025-04-02 07:02:27]  status=None
[2025-04-02 07:02:27]  status_code=0
[2025-04-02 07:02:27]  storage_token=
[2025-04-02 07:02:27]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6583648661/log.43634898._008901.job.log.tgz.1
[2025-04-02 07:02:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/7a/log.43634898._008901.job.log.tgz.1
[2025-04-02 07:02:27]  workdir=None
[2025-04-02 07:02:27] ]
[2025-04-02 07:02:27] 2025-04-02 12:02:03,936 | INFO     | transferring file log.43634898._008901.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6583648661/log.43634898._008901.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-02 07:02:27] 2025-04-02 12:02:03,936 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6583648661/log.43634898._008901.job.log.tgz.1 /var/lib/boinc/slots/1/log.43634898._008901.job
[2025-04-02 07:02:27] 2025-04-02 12:02:03,946 | INFO     | adding to output.list: log.43634898._008901.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/7a/log.43634898._008901.job.log.tg
[2025-04-02 07:02:27] 2025-04-02 12:02:03,946 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-02 07:02:27] 2025-04-02 12:02:03,946 | INFO     | summary of transferred files:
[2025-04-02 07:02:27] 2025-04-02 12:02:03,946 | INFO     |  -- lfn=log.43634898._008901.job.log.tgz.1, status_code=0, status=transferred
[2025-04-02 07:02:27] 2025-04-02 12:02:03,946 | INFO     | stage-out finished correctly
[2025-04-02 07:02:27] 2025-04-02 12:02:07,119 | WARNING  | process 2476 can no longer be monitored (due to stat problems) - aborting
[2025-04-02 07:02:27] 2025-04-02 12:02:07,119 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6583648661/memory_monitor_summary.json (trf name=prmon)
[2025-04-02 07:02:27] 2025-04-02 12:02:07,150 | INFO     | number of running child processes to parent process 2476: 1
[2025-04-02 07:02:27] 2025-04-02 12:02:07,150 | INFO     | maximum number of monitored processes: 6
[2025-04-02 07:02:27] 2025-04-02 12:02:07,435 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-02 07:02:27] 2025-04-02 12:02:08,234 | INFO     | job 6583648661 has state=finished
[2025-04-02 07:02:27] 2025-04-02 12:02:08,234 | INFO     | preparing for final server update for job 6583648661 in state='finished'
[2025-04-02 07:02:27] 2025-04-02 12:02:08,451 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-02 07:02:27] 2025-04-02 12:02:08,452 | INFO     | this job has now completed (state=finished)
[2025-04-02 07:02:27] 2025-04-02 12:02:08,452 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-02 07:02:27] 2025-04-02 12:02:08,452 | INFO     | log transfer has been attempted: DONE
[2025-04-02 07:02:27] 2025-04-02 12:02:08,452 | INFO     | job 6583648661 has finished - writing final server update
[2025-04-02 07:02:27] 2025-04-02 12:02:08,452 | INFO     | total number of processed events: 400 (read)
[2025-04-02 07:02:27] 2025-04-02 12:02:08,453 | INFO     | executing command: lscpu
[2025-04-02 07:02:27] 2025-04-02 12:02:08,479 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-02 07:02:27] 2025-04-02 12:02:09,653 | INFO     | monitor loop #224: job 0:6583648661 is in state 'finished'
[2025-04-02 07:02:27] 2025-04-02 12:02:09,654 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-02 07:02:27] 2025-04-02 12:02:10,678 | INFO     | 2899s have passed since pilot start
[2025-04-02 07:02:27] 2025-04-02 12:02:11,730 | INFO     | PID=27815 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-02 07:02:27] 2025-04-02 12:02:11,730 | INFO     | .. there are 2 such processes running
[2025-04-02 07:02:27] 2025-04-02 12:02:12,156 | INFO     | monitor loop #225: job 0:6583648661 is in state 'finished'
[2025-04-02 07:02:27] 2025-04-02 12:02:12,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-02 07:02:27] 2025-04-02 12:02:13,223 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-02 07:02:27] 2025-04-02 12:02:13,224 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6583648661/memory_monitor_summary.json (trf name=prmon)
[2025-04-02 07:02:27] 2025-04-02 12:02:13,224 | INFO     | extracted standard info from prmon json
[2025-04-02 07:02:27] 2025-04-02 12:02:13,224 | INFO     | extracted standard memory fields from prmon json
[2025-04-02 07:02:27] 2025-04-02 12:02:13,224 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-02 07:02:27] 2025-04-02 12:02:13,224 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-02 07:02:27] 2025-04-02 12:02:13,224 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | fitting pss+swap vs Time
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | model: linear, x: [1743592756.0, 1743592817.0, 1743592878.0, 1743592939.0, 1743593000.0, 1743593061.0, 1743593122.0, 1743593183.0, 1743593244.0, 1743593305.0, 1743
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | sum of square deviations: 21358540.0
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | sum of deviations: 3860365845.9999995
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | mean x: 1743593976.0
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | mean y: 3039933.2926829266
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | -- intersect: -315136039528.2128
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | intersect: -315136039528.2128
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | chi2: 0.6801351314839265
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | -- intersect: -315136039528.2128
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | current memory leak: 180.74 B/s (using 41 data points, chi2=0.68)
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | ..............................
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | . Timing measurements:
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | . get job = 0 s
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | . initial setup = 2 s
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | . payload setup = 2 s
[2025-04-02 07:02:27] 2025-04-02 12:02:13,225 | INFO     | . stage-in = 0 s
[2025-04-02 07:02:27] 2025-04-02 12:02:13,226 | INFO     | . payload execution = 2869 s
[2025-04-02 07:02:27] 2025-04-02 12:02:13,226 | INFO     | . stage-out = 0 s
[2025-04-02 07:02:27] 2025-04-02 12:02:13,226 | INFO     | . log creation = 0 s
[2025-04-02 07:02:27] 2025-04-02 12:02:13,226 | INFO     | ..............................
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | 
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | job summary report
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | --------------------------------------------------
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | PanDA job id: 6583648661
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | task id: 43634898
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | errors: (none)
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | pilot state: finished 
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | transexitcode: 0
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | exeerrorcode: 0
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | exeerrordiag: 
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | exitcode: 0
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | exitmsg: OK
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | cpuconsumptiontime: 28187 s
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | nevents: 400
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | neventsw: 0
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | pid: 2476
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | pgrp: 2476
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | corecount: 12
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | event service: False
[2025-04-02 07:02:27] 2025-04-02 12:02:13,267 | INFO     | sizes: {0: 2410824, 1: 2411023, 3: 2411229, 11: 2411257, 2875: 2436633, 2876: 2436632, 2877: 2445757, 2881: 2445813, 2886: 2445983}
[2025-04-02 07:02:27] 2025-04-02 12:02:13,268 | INFO     | --------------------------------------------------
[2025-04-02 07:02:27] 2025-04-02 12:02:13,268 | INFO     | 
[2025-04-02 07:02:27] 2025-04-02 12:02:13,268 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,279 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-02 07:02:27] 2025-04-02 12:02:13,280 | INFO     | job 6583648661 has completed (purged errors)
[2025-04-02 07:02:27] 2025-04-02 12:02:13,280 | INFO     | overall cleanup function is called
[2025-04-02 07:02:27] 2025-04-02 12:02:14,288 | INFO     | --- collectZombieJob: --- 10, [2476]
[2025-04-02 07:02:27] 2025-04-02 12:02:14,289 | INFO     | zombie collector waiting for pid 2476
[2025-04-02 07:02:27] 2025-04-02 12:02:14,289 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-02 07:02:27] 2025-04-02 12:02:14,289 | INFO     | collected zombie processes
[2025-04-02 07:02:27] 2025-04-02 12:02:14,289 | INFO     | will attempt to kill all subprocesses of pid=2476
[2025-04-02 07:02:27] 2025-04-02 12:02:14,320 | INFO     | process IDs to be killed: [2476] (in reverse order)
[2025-04-02 07:02:27] 2025-04-02 12:02:14,345 | WARNING  | found no corresponding commands to process id(s)
[2025-04-02 07:02:27] 2025-04-02 12:02:14,346 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-02 07:02:27] 2025-04-02 12:02:14,347 | INFO     | did not find any defunct processes belonging to 2476
[2025-04-02 07:02:27] 2025-04-02 12:02:14,349 | INFO     | did not find any defunct processes belonging to 2476
[2025-04-02 07:02:27] 2025-04-02 12:02:14,349 | INFO     | ready for new job
[2025-04-02 07:02:27] 2025-04-02 12:02:14,349 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-02 07:02:27] 2025-04-02 12:02:14,351 | INFO     | ***************************************
[2025-04-02 07:02:27] 2025-04-02 12:02:14,351 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-02 07:02:27] 2025-04-02 12:02:14,351 | INFO     | ***************************************
[2025-04-02 07:02:27] 2025-04-02 12:02:14,351 | INFO     | 
[2025-04-02 07:02:27] 2025-04-02 12:02:14,352 | INFO     | architecture information:
[2025-04-02 07:02:27] 2025-04-02 12:02:14,352 | INFO     | executing command: cat /etc/os-release
[2025-04-02 07:02:27] 2025-04-02 12:02:14,364 | INFO     | cat /etc/os-release:
[2025-04-02 07:02:27] NAME="CentOS Linux"
[2025-04-02 07:02:27] VERSION="7 (Core)"
[2025-04-02 07:02:27] ID="centos"
[2025-04-02 07:02:27] ID_LIKE="rhel fedora"
[2025-04-02 07:02:27] VERSION_ID="7"
[2025-04-02 07:02:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-02 07:02:27] ANSI_COLOR="0;31"
[2025-04-02 07:02:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-02 07:02:27] HOME_URL="https://www.centos.org/"
[2025-04-02 07:02:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-02 07:02:27] 
[2025-04-02 07:02:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-02 07:02:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-02 07:02:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-02 07:02:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-02 07:02:27] 
[2025-04-02 07:02:27] 2025-04-02 12:02:14,364 | INFO     | ***************************************
[2025-04-02 07:02:27] 2025-04-02 12:02:14,866 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-04-02 07:02:27] 2025-04-02 12:02:14,877 | INFO     | sufficient remaining disk space (3890178162688 B)
[2025-04-02 07:02:27] 2025-04-02 12:02:14,877 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-02 07:02:27] 2025-04-02 12:02:14,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-02 07:02:27] 2025-04-02 12:02:14,877 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-02 07:02:27] 2025-04-02 12:02:14,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-02 07:02:27] 2025-04-02 12:02:15,064 | INFO     | all data control threads have been joined
[2025-04-02 07:02:27] 2025-04-02 12:02:15,152 | INFO     | all payload control threads have been joined
[2025-04-02 07:02:27] 2025-04-02 12:02:15,664 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-02 07:02:27] 2025-04-02 12:02:15,665 | INFO     | aborting loop
[2025-04-02 07:02:27] 2025-04-02 12:02:15,738 | INFO     | found 0 job(s) in 20 queues
[2025-04-02 07:02:27] 2025-04-02 12:02:15,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-02 07:02:27] 2025-04-02 12:02:15,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-02 07:02:27] 2025-04-02 12:02:15,778 | INFO     | all job control threads have been joined
[2025-04-02 07:02:27] 2025-04-02 12:02:15,882 | INFO     | [job] retrieve thread has finished
[2025-04-02 07:02:27] 2025-04-02 12:02:15,882 | INFO     | [job] queue monitor thread has finished
[2025-04-02 07:02:27] 2025-04-02 12:02:15,998 | INFO     | [payload] failed_post thread has finished
[2025-04-02 07:02:27] 2025-04-02 12:02:16,069 | INFO     | [data] control thread has finished
[2025-04-02 07:02:27] 2025-04-02 12:02:16,157 | INFO     | [payload] control thread has finished
[2025-04-02 07:02:27] 2025-04-02 12:02:16,527 | INFO     | [payload] validate_post thread has finished
[2025-04-02 07:02:27] 2025-04-02 12:02:16,638 | INFO     | [job] validate thread has finished
[2025-04-02 07:02:27] 2025-04-02 12:02:16,670 | INFO     | [job] job monitor thread has finished
[2025-04-02 07:02:27] 2025-04-02 12:02:16,743 | INFO     | [payload] validate_pre thread has finished
[2025-04-02 07:02:27] 2025-04-02 12:02:16,783 | INFO     | [job] control thread has finished
[2025-04-02 07:02:27] 2025-04-02 12:02:16,836 | INFO     | [payload] execute_payloads thread has finished
[2025-04-02 07:02:27] 2025-04-02 12:02:16,882 | INFO     | [data] copytool_out thread has finished
[2025-04-02 07:02:27] 2025-04-02 12:02:16,919 | INFO     | [job] create_data_payload thread has finished
[2025-04-02 07:02:27] 2025-04-02 12:02:17,227 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-02 07:02:27] 2025-04-02 12:02:17,286 | INFO     | [data] copytool_in thread has finished
[2025-04-02 07:02:27] 2025-04-02 12:02:17,992 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-02 07:02:27] 2025-04-02 12:02:21,998 | INFO     | [data] queue_monitor thread has finished
[2025-04-02 07:02:27] 2025-04-02 12:02:22,214 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139696537012032)>', '<ExcThread(monitor, started 139696176862976)>']
[2025-04-02 07:02:27] 2025-04-02 12:02:22,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-02 07:02:27] 2025-04-02 12:02:22,770 | INFO     | [monitor] control thread has ended
[2025-04-02 07:02:27] 2025-04-02 12:02:27,238 | INFO     | all workflow threads have been joined
[2025-04-02 07:02:27] 2025-04-02 12:02:27,238 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-02 07:02:27] 2025-04-02 12:02:27,238 | INFO     | traces error code: 0
[2025-04-02 07:02:27] 2025-04-02 12:02:27,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-02 07:02:27] 2025-04-02 12:02:27,302 [wrapper] ==== pilot stdout END ====
[2025-04-02 07:02:27] 2025-04-02 12:02:27,304 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-02 07:02:27] 2025-04-02 12:02:27,306 [wrapper] pilotpid: 27815
[2025-04-02 07:02:27] 2025-04-02 12:02:27,308 [wrapper] Pilot exit status: 0
[2025-04-02 07:02:27] 2025-04-02 12:02:27,314 [wrapper] pandaids: 6583648661
[2025-04-02 07:02:27] 2025-04-02 12:02:27,331 [wrapper] cleanup supervisor_pilot 30351 27816
[2025-04-02 07:02:27] 2025-04-02 12:02:27,333 [wrapper] Test setup, not cleaning
[2025-04-02 07:02:27] 2025-04-02 12:02:27,335 [wrapper] apfmon messages muted
[2025-04-02 07:02:27] 2025-04-02 12:02:27,337 [wrapper] ==== wrapper stdout END ====
[2025-04-02 07:02:27] 2025-04-02 12:02:27,339 [wrapper] ==== wrapper stderr END ====
[2025-04-02 07:02:27]  *** Error codes and diagnostics ***
[2025-04-02 07:02:27]     "exeErrorCode": 0,
[2025-04-02 07:02:27]     "exeErrorDiag": "",
[2025-04-02 07:02:27]     "pilotErrorCode": 0,
[2025-04-02 07:02:27]     "pilotErrorDiag": "",
[2025-04-02 07:02:27]  *** Listing of results directory ***
[2025-04-02 07:02:27] total 665176
[2025-04-02 07:02:27] -rw-r--r-- 1 boinc boinc    494584 Apr  1 17:39 pilot3.tar.gz
[2025-04-02 07:02:27] -rwx------ 1 boinc boinc     37140 Apr  1 18:14 runpilot2-wrapper.sh
[2025-04-02 07:02:27] -rw-r--r-- 1 boinc boinc      5112 Apr  1 18:14 queuedata.json
[2025-04-02 07:02:27] -rw-r--r-- 1 boinc boinc       100 Apr  2 06:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-02 07:02:27] -rwxr-xr-x 1 boinc boinc      7986 Apr  2 06:13 run_atlas
[2025-04-02 07:02:27] -rw-r--r-- 1 boinc boinc       105 Apr  2 06:13 job.xml
[2025-04-02 07:02:27] -rw-r--r-- 2 boinc boinc     17571 Apr  2 06:13 start_atlas.sh
[2025-04-02 07:02:27] drwxrwx--x 1 boinc boinc        76 Apr  2 06:13 shared
[2025-04-02 07:02:27] -rw-r--r-- 2 boinc boinc    507251 Apr  2 06:13 input.tar.gz
[2025-04-02 07:02:27] -rw-r--r-- 1 boinc boinc     10040 Apr  2 06:13 init_data.xml
[2025-04-02 07:02:27] -rw-r--r-- 2 boinc boinc 357763141 Apr  2 06:13 EVNT.43634896._000237.pool.root.1
[2025-04-02 07:02:27] -rw-r--r-- 1 boinc boinc         0 Apr  2 06:13 boinc_lockfile
[2025-04-02 07:02:27] -rw-r--r-- 1 boinc boinc      2597 Apr  2 06:13 pandaJob.out
[2025-04-02 07:02:27] -rw------- 1 boinc boinc       473 Apr  2 06:13 setup.sh.local
[2025-04-02 07:02:27] -rw------- 1 boinc boinc    989885 Apr  2 06:13 agis_schedconf.cvmfs.json
[2025-04-02 07:02:27] -rw------- 1 boinc boinc   1599134 Apr  2 06:13 agis_ddmendpoints.agis.ALL.json
[2025-04-02 07:02:27] drwx------ 1 boinc boinc       368 Apr  2 06:13 pilot3
[2025-04-02 07:02:27] -rw------- 1 boinc boinc 318216753 Apr  2 07:01 HITS.43634898._008901.pool.root.1
[2025-04-02 07:02:27] -rw-r--r-- 1 boinc boinc       529 Apr  2 07:01 boinc_task_state.xml
[2025-04-02 07:02:27] -rw------- 1 boinc boinc      1025 Apr  2 07:01 memory_monitor_summary.json
[2025-04-02 07:02:27] -rw------- 1 boinc boinc    357893 Apr  2 07:02 log.43634898._008901.job.log.tgz.1
[2025-04-02 07:02:27] -rw------- 1 boinc boinc        95 Apr  2 07:02 pilot_heartbeat.json
[2025-04-02 07:02:27] -rw------- 1 boinc boinc      7682 Apr  2 07:02 heartbeat.json
[2025-04-02 07:02:27] -rw-r--r-- 1 boinc boinc        27 Apr  2 07:02 wrapper_checkpoint.txt
[2025-04-02 07:02:27] -rw-r--r-- 1 boinc boinc      8192 Apr  2 07:02 boinc_mmap_file
[2025-04-02 07:02:27] -rw------- 1 boinc boinc      4221 Apr  2 07:02 pilotlog.txt
[2025-04-02 07:02:27] -rw------- 1 boinc boinc    311597 Apr  2 07:02 log.43634898._008901.job.log.1
[2025-04-02 07:02:27] -rw------- 1 boinc boinc       357 Apr  2 07:02 output.list
[2025-04-02 07:02:27] -rw-r--r-- 1 boinc boinc       620 Apr  2 07:02 runtime_log
[2025-04-02 07:02:27] -rw------- 1 boinc boinc    686080 Apr  2 07:02 result.tar.gz
[2025-04-02 07:02:27] -rw-r--r-- 1 boinc boinc     11479 Apr  2 07:02 runtime_log.err
[2025-04-02 07:02:27] -rw------- 1 boinc boinc       652 Apr  2 07:02 MHQKDmdzzJ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmvbELDmTOUkMo.diag
[2025-04-02 07:02:27] -rw-r--r-- 1 boinc boinc     21499 Apr  2 07:02 stderr.txt
[2025-04-02 07:02:27] HITS file was successfully produced:
[2025-04-02 07:02:27] -rw------- 1 boinc boinc 318216753 Apr  2 07:01 shared/HITS.pool.root.1
[2025-04-02 07:02:27]  *** Contents of shared directory: ***
[2025-04-02 07:02:27] total 661328
[2025-04-02 07:02:27] -rw-r--r-- 2 boinc boinc     17571 Apr  2 06:13 start_atlas.sh
[2025-04-02 07:02:27] -rw-r--r-- 2 boinc boinc    507251 Apr  2 06:13 input.tar.gz
[2025-04-02 07:02:27] -rw-r--r-- 2 boinc boinc 357763141 Apr  2 06:13 ATLAS.root_0
[2025-04-02 07:02:27] -rw------- 1 boinc boinc 318216753 Apr  2 07:01 HITS.pool.root.1
[2025-04-02 07:02:27] -rw------- 1 boinc boinc    686080 Apr  2 07:02 result.tar.gz
07:02:29 (23966): run_atlas exited; CPU time 28184.179803
07:02:29 (23966): called boinc_finish(0)

</stderr_txt>
]]>

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