Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-02 07:31:28 (15668): Detected: vboxwrapper 26206
2025-04-02 07:31:28 (15668): Detected: BOINC client v8.0.2
2025-04-02 07:31:30 (15668): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-02 07:31:30 (15668): Successfully copied 'init_data.xml' to the shared directory.
2025-04-02 07:31:30 (15668): Create VM. (boinc_00bfe30a1c9dd339, slot#12)
2025-04-02 07:31:31 (15668): Setting Memory Size for VM. (4800MB)
2025-04-02 07:31:31 (15668): Setting CPU Count for VM. (8)
2025-04-02 07:31:32 (15668): Setting Chipset Options for VM.
2025-04-02 07:31:32 (15668): Setting Graphics Controller Options for VM.
2025-04-02 07:31:32 (15668): Setting Boot Options for VM.
2025-04-02 07:31:33 (15668): Setting Network Configuration for NAT.
2025-04-02 07:31:33 (15668): Enabling VM Network Access.
2025-04-02 07:31:33 (15668): Disabling USB Support for VM.
2025-04-02 07:31:33 (15668): Disabling COM Port Support for VM.
2025-04-02 07:31:34 (15668): Disabling LPT Port Support for VM.
2025-04-02 07:31:34 (15668): Disabling Audio Support for VM.
2025-04-02 07:31:34 (15668): Disabling Clipboard Support for VM.
2025-04-02 07:31:35 (15668): Disabling Drag and Drop Support for VM.
2025-04-02 07:31:35 (15668): Adding storage controller(s) to VM.
2025-04-02 07:31:35 (15668): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-02 07:31:38 (15668): Adding VirtualBox Guest Additions to VM.
2025-04-02 07:31:38 (15668): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-02 07:31:39 (15668): forwarding host port 56435 to guest port 80
2025-04-02 07:31:39 (15668): Enabling remote desktop for VM.
2025-04-02 07:31:39 (15668): Required extension pack not installed, remote desktop not enabled.
2025-04-02 07:31:39 (15668): Enabling shared directory for VM.
2025-04-02 07:31:40 (15668): Starting VM using VBoxManage interface. (boinc_00bfe30a1c9dd339, slot#12)
2025-04-02 07:31:47 (15668): Successfully started VM. (PID = '32996')
2025-04-02 07:31:47 (15668): Reporting VM Process ID to BOINC.
2025-04-02 07:31:47 (15668): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-02 07:31:47 (15668): Guest Log: CPUID EDX: 0x178bfbff
2025-04-02 07:31:47 (15668): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-02 07:31:47 (15668): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-02 07:31:47 (15668): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-02 07:31:47 (15668): Detected: Web Application Enabled (http://localhost:56435)
2025-04-02 07:31:47 (15668): Preference change detected
2025-04-02 07:31:47 (15668): Setting CPU throttle for VM. (100%)
2025-04-02 07:31:47 (15668): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-02 07:31:49 (15668): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-02 07:31:49 (15668): Guest Log: BIOS: Booting from Hard Disk...
2025-04-02 07:31:52 (15668): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-02 07:31:52 (15668): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-02 07:31:52 (15668): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-02 07:31:59 (15668): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-02 07:31:59 (15668): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-02 07:32:04 (15668): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-02 07:32:04 (15668): Guest Log: 00:00:00.000121 main     Log opened 2025-04-02T07:32:02.453258000Z
2025-04-02 07:32:04 (15668): Guest Log: 00:00:00.000254 main     OS Product: Linux
2025-04-02 07:32:04 (15668): Guest Log: 00:00:00.000418 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-02 07:32:04 (15668): Guest Log: 00:00:00.000492 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-02 07:32:04 (15668): Guest Log: 00:00:00.000525 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-02 07:32:04 (15668): Guest Log: 00:00:00.000526 main     Process ID: 1383
2025-04-02 07:32:04 (15668): Guest Log: 00:00:00.000526 main     Package type: LINUX_64BITS_GENERIC
2025-04-02 07:32:04 (15668): Guest Log: 00:00:00.001395 main     5.2.32 r132073 started. Verbose level = 0
2025-04-02 07:32:04 (15668): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-02 07:32:04 (15668): Guest Log: [INFO] Mounting shared directory
2025-04-02 07:32:04 (15668): Guest Log: [INFO] Checking for init_data.xml
2025-04-02 07:32:08 (15668): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-02 07:32:08 (15668): Guest Log: [INFO] Detected branch: prod
2025-04-02 07:32:08 (15668): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-02 07:32:08 (15668): Guest Log: Copying input files
2025-04-02 07:32:11 (15668): Guest Log: Copied input files into RunAtlas.
2025-04-02 07:32:11 (15668): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-02 07:32:11 (15668): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-02 07:32:11 (15668): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-02 07:32:11 (15668): Guest Log: Further information can be found at the LHC@home message board.
2025-04-02 07:32:14 (15668): Guest Log: 00:00:10.028425 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 507 964 000ns (GuestNow=1 743 575 533 947 728 000 ns GuestLast=1 743 579 122 455 692 000 ns fSetTimeLastLoop=true )
2025-04-02 07:32:19 (15668): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-02 07:32:20 (15668): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-02 07:32:20 (15668): Guest Log: 2.6.3.0 1659 0 30140 144397 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-02 07:32:21 (15668): Guest Log: copied the webapp to /var/www
2025-04-02 07:32:21 (15668): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-02 07:32:21 (15668): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-02 07:32:21 (15668): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-02 07:32:21 (15668): Guest Log:  *** Starting ATLAS job. (PandaID=6583710061 taskID=43634898) ***
2025-04-02 07:40:26 (15668): Guest Log:  *** Job finished ***
2025-04-02 07:40:26 (15668): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:14,615 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:15,624 | INFO     | [job] queue monitor thread has finished
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:17,543 | INFO     | [data] queue_monitor thread has finished
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:19,087 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139744746342208)>', '<ExcThread(monitor, started 139743933228800)>']
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:19,868 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:19,868 | INFO     | [monitor] control thread has ended
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:24,136 | INFO     | all workflow threads have been joined
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:24,136 | INFO     | end of generic workflow (traces error code: 0)
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:24,137 | INFO     | traces error code: 0
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:24,137 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:24,229 [wrapper] ==== pilot stdout END ====
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:24,237 [wrapper] ==== wrapper stdout RESUME ====
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:24,245 [wrapper] pilotpid: 6002
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:24,254 [wrapper] Pilot exit status: 0
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:24,415 [wrapper] pandaids: 6583710061
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:24,455 [wrapper] cleanup supervisor_pilot  6008 6003
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:24,463 [wrapper] Test setup, not cleaning
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:24,469 [wrapper] apfmon messages muted
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:24,474 [wrapper] ==== wrapper stdout END ====
2025-04-02 07:40:26 (15668): Guest Log: 2025-04-02 06:40:24,479 [wrapper] ==== wrapper stderr END ====
2025-04-02 07:40:26 (15668): Guest Log:  *** Error codes and diagnostics ***
2025-04-02 07:40:26 (15668): Guest Log:     "exeErrorCode": 65,
2025-04-02 07:40:26 (15668): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-04-02 07:40:26 (15668): Guest Log:     "pilotErrorCode": 1305,
2025-04-02 07:40:26 (15668): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-04-02 07:40:26 (15668): Guest Log:  *** Listing of results directory ***
2025-04-02 07:40:26 (15668): Guest Log: total 3904
2025-04-02 07:40:26 (15668): Guest Log: -rw-r--r--. 1 atlas atlas  494584 Apr  2 01:46 pilot3.tar.gz
2025-04-02 07:40:26 (15668): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Apr  2 01:59 queuedata.json
2025-04-02 07:40:26 (15668): Guest Log: -rwx------. 1 atlas atlas   37140 Apr  2 02:01 runpilot2-wrapper.sh
2025-04-02 07:40:26 (15668): Guest Log: -rwxr-xr-x. 1 atlas atlas    9087 Apr  2 06:32 init_data.xml
2025-04-02 07:40:26 (15668): Guest Log: -rwxr-xr-x. 1 atlas atlas  507252 Apr  2 06:32 input.tar.gz
2025-04-02 07:40:26 (15668): Guest Log: -rwxr-xr-x. 1 atlas atlas   17571 Apr  2 06:32 start_atlas.sh
2025-04-02 07:40:26 (15668): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr  2 06:32 EVNT.43634896._000254.pool.root.1 -> /data/./ATLAS.root_0
2025-04-02 07:40:26 (15668): Guest Log: -rw-r--r--. 1 atlas atlas    2599 Apr  2 06:32 pandaJob.out
2025-04-02 07:40:26 (15668): Guest Log: -rw-------. 1 atlas atlas     424 Apr  2 06:32 setup.sh.local
2025-04-02 07:40:26 (15668): Guest Log: -rw-------. 1 atlas atlas  989902 Apr  2 06:33 agis_schedconf.cvmfs.json
2025-04-02 07:40:26 (15668): Guest Log: -rw-------. 1 atlas atlas 1599134 Apr  2 06:33 agis_ddmendpoints.agis.ALL.json
2025-04-02 07:40:26 (15668): Guest Log: drwx------. 4 atlas atlas    4096 Apr  2 06:33 pilot3
2025-04-02 07:40:26 (15668): Guest Log: -rw-------. 1 atlas atlas    1002 Apr  2 06:40 memory_monitor_summary.json
2025-04-02 07:40:26 (15668): Guest Log: -rw-------. 1 atlas atlas   22777 Apr  2 06:40 log.43634898._010202.job.log.tgz.1
2025-04-02 07:40:26 (15668): Guest Log: -rw-------. 1 atlas atlas      95 Apr  2 06:40 pilot_heartbeat.json
2025-04-02 07:40:26 (15668): Guest Log: -rw-------. 1 atlas atlas    8484 Apr  2 06:40 heartbeat.json
2025-04-02 07:40:26 (15668): Guest Log: -rw-------. 1 atlas atlas    4402 Apr  2 06:40 pilotlog.txt
2025-04-02 07:40:26 (15668): Guest Log: -rw-------. 1 atlas atlas   90259 Apr  2 06:40 log.43634898._010202.job.log.1
2025-04-02 07:40:26 (15668): Guest Log: -rw-------. 1 atlas atlas     188 Apr  2 06:40 output.list
2025-04-02 07:40:26 (15668): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr  2 06:40 runtime_log
2025-04-02 07:40:26 (15668): Guest Log: -rw-------. 1 atlas atlas  133120 Apr  2 06:40 result.tar.gz
2025-04-02 07:40:26 (15668): Guest Log: -rw-------. 1 atlas atlas     640 Apr  2 06:40 TJcKDmla2J7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm7arKDm5QbMSm.diag
2025-04-02 07:40:26 (15668): Guest Log: -rw-r--r--. 1 atlas atlas   10786 Apr  2 06:40 runtime_log.err
2025-04-02 07:40:26 (15668): Guest Log: Looking for outputfile HITS.43634898._010202.pool.root.1
2025-04-02 07:40:26 (15668): Guest Log: No HITS file was produced
2025-04-02 07:40:26 (15668): Guest Log: Successfully finished the ATLAS job!
2025-04-02 07:40:26 (15668): Guest Log: Copying the results back to the shared directory!
2025-04-02 07:40:26 (15668): Guest Log:  *** Contents of shared directory: ***
2025-04-02 07:40:26 (15668): Guest Log: total 349596
2025-04-02 07:40:26 (15668): Guest Log: -rwxrwxrwx. 1 root root 357308761 Apr  2 06:31 ATLAS.root_0
2025-04-02 07:40:26 (15668): Guest Log: -rwxrwxrwx. 1 root root      9087 Apr  2 06:31 init_data.xml
2025-04-02 07:40:26 (15668): Guest Log: -rwxrwxrwx. 1 root root    507252 Apr  2 06:21 input.tar.gz
2025-04-02 07:40:26 (15668): Guest Log: -rwxrwxrwx. 1 root root    133120 Apr  2 06:40 result.tar.gz
2025-04-02 07:40:26 (15668): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  2 06:21 start_atlas.sh
2025-04-02 07:40:26 (15668): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-02 07:40:26 (15668): VM Completion File Detected.
2025-04-02 07:40:26 (15668): Powering off VM.
2025-04-02 07:40:27 (15668): Successfully stopped VM.
2025-04-02 07:40:27 (15668): Deregistering VM. (boinc_00bfe30a1c9dd339, slot#12)
2025-04-02 07:40:27 (15668): Removing network bandwidth throttle group from VM.
2025-04-02 07:40:27 (15668): Removing VM from VirtualBox.
07:40:32 (15668): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN