Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-02 04:30:55 (4448): Detected: vboxwrapper 26206
2025-04-02 04:30:55 (4448): Detected: BOINC client v8.0.2
2025-04-02 04:30:56 (4448): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-04-02 04:30:56 (4448): Successfully copied 'init_data.xml' to the shared directory.
2025-04-02 04:30:57 (4448): Create VM. (boinc_24f156827c895d2a, slot#0)
2025-04-02 04:30:57 (4448): Setting Memory Size for VM. (6200MB)
2025-04-02 04:30:57 (4448): Setting CPU Count for VM. (3)
2025-04-02 04:30:58 (4448): Setting Chipset Options for VM.
2025-04-02 04:30:58 (4448): Setting Graphics Controller Options for VM.
2025-04-02 04:30:58 (4448): Setting Boot Options for VM.
2025-04-02 04:30:58 (4448): Setting Network Configuration for NAT.
2025-04-02 04:30:59 (4448): Enabling VM Network Access.
2025-04-02 04:30:59 (4448): Disabling USB Support for VM.
2025-04-02 04:30:59 (4448): Disabling COM Port Support for VM.
2025-04-02 04:31:00 (4448): Disabling LPT Port Support for VM.
2025-04-02 04:31:00 (4448): Disabling Audio Support for VM.
2025-04-02 04:31:00 (4448): Disabling Clipboard Support for VM.
2025-04-02 04:31:00 (4448): Disabling Drag and Drop Support for VM.
2025-04-02 04:31:01 (4448): Adding storage controller(s) to VM.
2025-04-02 04:31:01 (4448): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-02 04:31:04 (4448): Adding VirtualBox Guest Additions to VM.
2025-04-02 04:31:04 (4448): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-02 04:31:04 (4448): forwarding host port 64472 to guest port 80
2025-04-02 04:31:04 (4448): Enabling remote desktop for VM.
2025-04-02 04:31:05 (4448): Enabling shared directory for VM.
2025-04-02 04:31:06 (4448): Starting VM using VBoxManage interface. (boinc_24f156827c895d2a, slot#0)
2025-04-02 04:31:11 (4448): Successfully started VM. (PID = '5296')
2025-04-02 04:31:11 (4448): Reporting VM Process ID to BOINC.
2025-04-02 04:31:11 (4448): Guest Log: BIOS: VirtualBox 7.0.12
2025-04-02 04:31:11 (4448): Guest Log: CPUID EDX: 0x178bfbff
2025-04-02 04:31:11 (4448): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-02 04:31:11 (4448): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-02 04:31:11 (4448): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-02 04:31:11 (4448): Detected: Web Application Enabled (http://localhost:64472)
2025-04-02 04:31:11 (4448): Detected: Remote Desktop Enabled (localhost:64473)
2025-04-02 04:31:11 (4448): Preference change detected
2025-04-02 04:31:11 (4448): Setting CPU throttle for VM. (100%)
2025-04-02 04:31:11 (4448): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-02 04:31:13 (4448): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-02 04:31:13 (4448): Guest Log: BIOS: Booting from Hard Disk...
2025-04-02 04:31:15 (4448): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-02 04:31:15 (4448): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-02 04:31:15 (4448): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-02 04:31:19 (4448): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-02 04:31:19 (4448): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-02 04:31:22 (4448): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-02 04:31:22 (4448): Guest Log: 00:00:00.000068 main     Log opened 2025-04-02T04:31:20.797799000Z
2025-04-02 04:31:22 (4448): Guest Log: 00:00:00.000126 main     OS Product: Linux
2025-04-02 04:31:22 (4448): Guest Log: 00:00:00.000163 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-02 04:31:22 (4448): Guest Log: 00:00:00.000182 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-02 04:31:22 (4448): Guest Log: 00:00:00.000209 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-02 04:31:22 (4448): Guest Log: 00:00:00.000209 main     Process ID: 1339
2025-04-02 04:31:22 (4448): Guest Log: 00:00:00.000210 main     Package type: LINUX_64BITS_GENERIC
2025-04-02 04:31:22 (4448): Guest Log: 00:00:00.000636 main     5.2.32 r132073 started. Verbose level = 0
2025-04-02 04:31:22 (4448): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-02 04:31:22 (4448): Guest Log: [INFO] Mounting shared directory
2025-04-02 04:31:22 (4448): Guest Log: [INFO] Checking for init_data.xml
2025-04-02 04:31:25 (4448): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-02 04:31:25 (4448): Guest Log: [INFO] Detected branch: prod
2025-04-02 04:31:25 (4448): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-02 04:31:25 (4448): Guest Log: Copying input files
2025-04-02 04:31:26 (4448): Guest Log: Copied input files into RunAtlas.
2025-04-02 04:31:26 (4448): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-04-02 04:31:32 (4448): Guest Log: 00:00:10.003072 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 472 434 000ns (GuestNow=1 743 561 092 328 173 000 ns GuestLast=1 743 568 280 800 607 000 ns fSetTimeLastLoop=true )
2025-04-02 04:31:35 (4448): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-02 04:31:35 (4448): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-02 04:31:35 (4448): Guest Log: 2.6.3.0 1612 0 31648 144390 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-04-02 04:31:36 (4448): Guest Log: copied the webapp to /var/www
2025-04-02 04:31:36 (4448): Guest Log: ATHENA_PROC_NUMBER=3
2025-04-02 04:31:36 (4448): Guest Log: ATHENA_CORE_NUMBER=3
2025-04-02 04:31:36 (4448): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-02 04:31:36 (4448): Guest Log:  *** Starting ATLAS job. (PandaID=6582727549 taskID=43634898) ***
2025-04-02 06:11:15 (4448): Status Report: Elapsed Time: '6000.000000'
2025-04-02 06:11:15 (4448): Status Report: CPU Time: '16163.046875'
2025-04-02 07:37:11 (4448): Guest Log:  *** Job finished ***
2025-04-02 07:37:11 (4448): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:36:57,341 | INFO     | [data] queue_monitor thread has finished
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:02,329 | INFO     | job.realtimelogging is not enabled
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:03,330 | INFO     | [payload] run_realtimelog thread has finished
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:04,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139986957371200)>', '<ExcThread(monitor, started 139986489808640)>']
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:05,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:05,109 | INFO     | [monitor] control thread has ended
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:09,705 | INFO     | all workflow threads have been joined
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:09,705 | INFO     | end of generic workflow (traces error code: 0)
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:09,705 | INFO     | traces error code: 0
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:09,705 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:09,747 [wrapper] ==== pilot stdout END ====
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:09,749 [wrapper] ==== wrapper stdout RESUME ====
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:09,752 [wrapper] pilotpid: 5969
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:09,754 [wrapper] Pilot exit status: 0
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:09,795 [wrapper] pandaids: 6582727549
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:09,815 [wrapper] cleanup supervisor_pilot 10649 5970
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:09,817 [wrapper] Test setup, not cleaning
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:09,820 [wrapper] apfmon messages muted
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:09,823 [wrapper] ==== wrapper stdout END ====
2025-04-02 07:37:11 (4448): Guest Log: 2025-04-02 05:37:09,825 [wrapper] ==== wrapper stderr END ====
2025-04-02 07:37:11 (4448): Guest Log:  *** Error codes and diagnostics ***
2025-04-02 07:37:11 (4448): Guest Log:     "exeErrorCode": 0,
2025-04-02 07:37:11 (4448): Guest Log:     "exeErrorDiag": "",
2025-04-02 07:37:11 (4448): Guest Log:     "pilotErrorCode": 0,
2025-04-02 07:37:11 (4448): Guest Log:     "pilotErrorDiag": "",
2025-04-02 07:37:11 (4448): Guest Log:  *** Listing of results directory ***
2025-04-02 07:37:11 (4448): Guest Log: total 321304
2025-04-02 07:37:11 (4448): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Apr  1 19:03 pilot3.tar.gz
2025-04-02 07:37:11 (4448): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  1 19:11 runpilot2-wrapper.sh
2025-04-02 07:37:11 (4448): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Apr  1 19:11 queuedata.json
2025-04-02 07:37:11 (4448): Guest Log: -rwxr-xr-x. 1 atlas atlas      9332 Apr  2 02:31 init_data.xml
2025-04-02 07:37:11 (4448): Guest Log: -rwxr-xr-x. 1 atlas atlas    507247 Apr  2 02:31 input.tar.gz
2025-04-02 07:37:11 (4448): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  2 02:31 start_atlas.sh
2025-04-02 07:37:11 (4448): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  2 02:31 EVNT.43634896._000319.pool.root.1 -> /data/./ATLAS.root_0
2025-04-02 07:37:11 (4448): Guest Log: -rw-r--r--. 1 atlas atlas      2596 Apr  2 02:31 pandaJob.out
2025-04-02 07:37:11 (4448): Guest Log: -rw-------. 1 atlas atlas       459 Apr  2 02:32 setup.sh.local
2025-04-02 07:37:11 (4448): Guest Log: -rw-------. 1 atlas atlas    989902 Apr  2 02:35 agis_schedconf.cvmfs.json
2025-04-02 07:37:11 (4448): Guest Log: drwx------. 4 atlas atlas      4096 Apr  2 02:35 pilot3
2025-04-02 07:37:11 (4448): Guest Log: -rw-------. 1 atlas atlas 322708257 Apr  2 05:36 HITS.43634898._007324.pool.root.1
2025-04-02 07:37:11 (4448): Guest Log: -rw-------. 1 atlas atlas        95 Apr  2 05:36 pilot_heartbeat.json
2025-04-02 07:37:11 (4448): Guest Log: -rw-------. 1 atlas atlas      1033 Apr  2 05:36 memory_monitor_summary.json
2025-04-02 07:37:11 (4448): Guest Log: -rw-------. 1 atlas atlas   1599134 Apr  2 05:36 agis_ddmendpoints.agis.ALL.json
2025-04-02 07:37:11 (4448): Guest Log: -rw-------. 1 atlas atlas    292728 Apr  2 05:36 log.43634898._007324.job.log.tgz.1
2025-04-02 07:37:11 (4448): Guest Log: -rw-------. 1 atlas atlas      7730 Apr  2 05:36 heartbeat.json
2025-04-02 07:37:11 (4448): Guest Log: -rw-------. 1 atlas atlas      4667 Apr  2 05:37 pilotlog.txt
2025-04-02 07:37:11 (4448): Guest Log: -rw-------. 1 atlas atlas    975766 Apr  2 05:37 log.43634898._007324.job.log.1
2025-04-02 07:37:11 (4448): Guest Log: -rw-------. 1 atlas atlas       357 Apr  2 05:37 output.list
2025-04-02 07:37:11 (4448): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  2 05:37 runtime_log
2025-04-02 07:37:11 (4448): Guest Log: -rw-------. 1 atlas atlas   1290240 Apr  2 05:37 result.tar.gz
2025-04-02 07:37:11 (4448): Guest Log: -rw-r--r--. 1 atlas atlas     11279 Apr  2 05:37 runtime_log.err
2025-04-02 07:37:11 (4448): Guest Log: -rw-------. 1 atlas atlas       650 Apr  2 05:37 AvhMDmpCwJ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmvLrKDmE4GG2m.diag
2025-04-02 07:37:11 (4448): Guest Log: Looking for outputfile HITS.43634898._007324.pool.root.1
2025-04-02 07:37:11 (4448): Guest Log: HITS file was successfully produced
2025-04-02 07:37:11 (4448): Guest Log: -rw-------. 1 atlas atlas 322708257 Apr  2 05:36 /home/atlas/RunAtlas/HITS.43634898._007324.pool.root.1
2025-04-02 07:37:12 (4448): Guest Log: Successfully finished the ATLAS job!
2025-04-02 07:37:12 (4448): Guest Log: Copying the results back to the shared directory!
2025-04-02 07:37:12 (4448): Guest Log:  *** Contents of shared directory: ***
2025-04-02 07:37:12 (4448): Guest Log: total 669952
2025-04-02 07:37:12 (4448): Guest Log: -rwxrwxrwx. 1 root root 361495060 Apr  2 02:30 ATLAS.root_0
2025-04-02 07:37:12 (4448): Guest Log: -rwxrwxrwx. 1 root root 322708257 Apr  2 05:37 HITS.pool.root.1
2025-04-02 07:37:12 (4448): Guest Log: -rwxrwxrwx. 1 root root      9332 Apr  2 02:30 init_data.xml
2025-04-02 07:37:12 (4448): Guest Log: -rwxrwxrwx. 1 root root    507247 Apr  1 23:34 input.tar.gz
2025-04-02 07:37:12 (4448): Guest Log: -rwxrwxrwx. 1 root root   1290240 Apr  2 05:37 result.tar.gz
2025-04-02 07:37:12 (4448): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  1 23:34 start_atlas.sh
2025-04-02 07:37:12 (4448): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-02 07:37:12 (4448): VM Completion File Detected.
2025-04-02 07:37:12 (4448): Powering off VM.
2025-04-02 07:37:13 (4448): Successfully stopped VM.
2025-04-02 07:37:13 (4448): Deregistering VM. (boinc_24f156827c895d2a, slot#0)
2025-04-02 07:37:13 (4448): Removing network bandwidth throttle group from VM.
2025-04-02 07:37:13 (4448): Removing VM from VirtualBox.
07:37:18 (4448): called boinc_finish(0)

</stderr_txt>
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