Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-01 23:31:52 (20304): Detected: vboxwrapper 26206
2025-04-01 23:31:52 (20304): Detected: BOINC client v8.0.2
2025-04-01 23:31:52 (20304): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2025-04-01 23:31:53 (20304): Successfully copied 'init_data.xml' to the shared directory.
2025-04-01 23:31:53 (20304): Create VM. (boinc_3b5aa9d05e940f00, slot#3)
2025-04-01 23:31:54 (20304): Setting Memory Size for VM. (4400MB)
2025-04-01 23:31:54 (20304): Setting CPU Count for VM. (4)
2025-04-01 23:31:54 (20304): Setting Chipset Options for VM.
2025-04-01 23:31:55 (20304): Setting Graphics Controller Options for VM.
2025-04-01 23:31:55 (20304): Setting Boot Options for VM.
2025-04-01 23:31:55 (20304): Setting Network Configuration for NAT.
2025-04-01 23:31:56 (20304): Enabling VM Network Access.
2025-04-01 23:31:56 (20304): Disabling USB Support for VM.
2025-04-01 23:31:56 (20304): Disabling COM Port Support for VM.
2025-04-01 23:31:56 (20304): Disabling LPT Port Support for VM.
2025-04-01 23:31:57 (20304): Disabling Audio Support for VM.
2025-04-01 23:31:57 (20304): Disabling Clipboard Support for VM.
2025-04-01 23:31:57 (20304): Disabling Drag and Drop Support for VM.
2025-04-01 23:31:58 (20304): Adding storage controller(s) to VM.
2025-04-01 23:31:58 (20304): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-01 23:31:58 (20304): Adding VirtualBox Guest Additions to VM.
2025-04-01 23:31:59 (20304): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-01 23:31:59 (20304): forwarding host port 55829 to guest port 80
2025-04-01 23:31:59 (20304): Enabling remote desktop for VM.
2025-04-01 23:32:00 (20304): Required extension pack not installed, remote desktop not enabled.
2025-04-01 23:32:00 (20304): Enabling shared directory for VM.
2025-04-01 23:32:00 (20304): Starting VM using VBoxManage interface. (boinc_3b5aa9d05e940f00, slot#3)
2025-04-01 23:32:12 (20304): Successfully started VM. (PID = '6996')
2025-04-01 23:32:12 (20304): Reporting VM Process ID to BOINC.
2025-04-01 23:32:12 (20304): Guest Log: BIOS: VirtualBox 7.0.18
2025-04-01 23:32:12 (20304): Guest Log: CPUID EDX: 0x178bfbff
2025-04-01 23:32:12 (20304): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-01 23:32:12 (20304): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-01 23:32:12 (20304): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-01 23:32:12 (20304): Detected: Web Application Enabled (http://localhost:55829)
2025-04-01 23:32:12 (20304): Preference change detected
2025-04-01 23:32:12 (20304): Setting CPU throttle for VM. (100%)
2025-04-01 23:32:12 (20304): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-01 23:32:14 (20304): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-01 23:32:14 (20304): Guest Log: BIOS: Booting from Hard Disk...
2025-04-01 23:32:17 (20304): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-01 23:32:17 (20304): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-01 23:32:17 (20304): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-01 23:32:27 (20304): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-01 23:32:27 (20304): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-01 23:32:40 (20304): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-01 23:32:40 (20304): Guest Log: 00:00:00.000301 main     Log opened 2025-04-01T23:32:38.855059000Z
2025-04-01 23:32:40 (20304): Guest Log: 00:00:00.000545 main     OS Product: Linux
2025-04-01 23:32:40 (20304): Guest Log: 00:00:00.000615 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-01 23:32:40 (20304): Guest Log: 00:00:00.000670 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-01 23:32:40 (20304): Guest Log: 00:00:00.000726 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-01 23:32:40 (20304): Guest Log: 00:00:00.000728 main     Process ID: 1304
2025-04-01 23:32:40 (20304): Guest Log: 00:00:00.000730 main     Package type: LINUX_64BITS_GENERIC
2025-04-01 23:32:40 (20304): Guest Log: 00:00:00.002582 main     5.2.32 r132073 started. Verbose level = 0
2025-04-01 23:32:40 (20304): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-01 23:32:40 (20304): Guest Log: [INFO] Mounting shared directory
2025-04-01 23:32:41 (20304): Guest Log: [INFO] Checking for init_data.xml
2025-04-01 23:32:46 (20304): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-01 23:32:46 (20304): Guest Log: [INFO] Detected branch: prod
2025-04-01 23:32:46 (20304): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-01 23:32:46 (20304): Guest Log: Copying input files
2025-04-01 23:32:50 (20304): Guest Log: Copied input files into RunAtlas.
2025-04-01 23:32:50 (20304): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-01 23:32:50 (20304): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-01 23:32:50 (20304): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-01 23:32:50 (20304): Guest Log: Further information can be found at the LHC@home message board.
2025-04-01 23:32:50 (20304): Guest Log: 00:00:10.046899 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 361 052 000ns (GuestNow=1 743 543 170 499 188 000 ns GuestLast=1 743 550 358 860 240 000 ns fSetTimeLastLoop=true )
2025-04-01 23:32:59 (20304): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-01 23:32:59 (20304): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-01 23:32:59 (20304): Guest Log: 2.6.3.0 1578 0 32032 144382 3 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-01 23:33:00 (20304): Guest Log: copied the webapp to /var/www
2025-04-01 23:33:01 (20304): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-01 23:33:01 (20304): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-01 23:33:01 (20304): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-01 23:33:01 (20304): Guest Log:  *** Starting ATLAS job. (PandaID=6582533306 taskID=43634898) ***
2025-04-02 01:19:00 (20304): Status Report: Elapsed Time: '6000.575804'
2025-04-02 01:19:00 (20304): Status Report: CPU Time: '20132.656250'
2025-04-02 03:08:39 (20304): Status Report: Elapsed Time: '12001.338913'
2025-04-02 03:08:39 (20304): Status Report: CPU Time: '46016.484375'
2025-04-02 04:57:35 (20304): Status Report: Elapsed Time: '18002.245169'
2025-04-02 04:57:35 (20304): Status Report: CPU Time: '71752.656250'
2025-04-02 06:46:03 (20304): Status Report: Elapsed Time: '24002.939339'
2025-04-02 06:46:03 (20304): Status Report: CPU Time: '97062.656250'
2025-04-02 08:35:38 (20304): Status Report: Elapsed Time: '30003.021482'
2025-04-02 08:35:38 (20304): Status Report: CPU Time: '122749.562500'
2025-04-02 10:25:39 (20304): Status Report: Elapsed Time: '36003.116442'
2025-04-02 10:25:39 (20304): Status Report: CPU Time: '148485.187500'
2025-04-02 12:15:13 (20304): Status Report: Elapsed Time: '42003.757298'
2025-04-02 12:15:13 (20304): Status Report: CPU Time: '174272.234375'
2025-04-02 14:05:10 (20304): Status Report: Elapsed Time: '48003.855951'
2025-04-02 14:05:10 (20304): Status Report: CPU Time: '200134.234375'
2025-04-02 15:54:59 (20304): Status Report: Elapsed Time: '54004.432833'
2025-04-02 15:54:59 (20304): Status Report: CPU Time: '225941.328125'
2025-04-02 17:44:40 (20304): Status Report: Elapsed Time: '60005.035475'
2025-04-02 17:44:40 (20304): Status Report: CPU Time: '251668.406250'
2025-04-02 18:49:56 (20304): Guest Log:  *** Job finished ***
2025-04-02 18:49:56 (20304): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:43,106 | INFO     | [payload] validate_post thread has finished
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:43,846 | INFO     | [data] copytool_out thread has finished
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:47,091 | INFO     | [data] queue_monitor thread has finished
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:47,854 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140638088124224)>', '<ExcThread(monitor, started 140637781333760)>']
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:48,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:48,014 | INFO     | [monitor] control thread has ended
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:52,861 | INFO     | all workflow threads have been joined
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:52,862 | INFO     | end of generic workflow (traces error code: 0)
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:52,863 | INFO     | traces error code: 0
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:52,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:53,106 [wrapper] ==== pilot stdout END ====
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:53,117 [wrapper] ==== wrapper stdout RESUME ====
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:53,126 [wrapper] pilotpid: 5922
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:53,136 [wrapper] Pilot exit status: 0
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:53,222 [wrapper] pandaids: 6582533306
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:53,284 [wrapper] cleanup supervisor_pilot  3584 5923
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:53,294 [wrapper] Test setup, not cleaning
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:53,313 [wrapper] apfmon messages muted
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:53,326 [wrapper] ==== wrapper stdout END ====
2025-04-02 18:49:56 (20304): Guest Log: 2025-04-02 16:49:53,335 [wrapper] ==== wrapper stderr END ====
2025-04-02 18:49:56 (20304): Guest Log:  *** Error codes and diagnostics ***
2025-04-02 18:49:56 (20304): Guest Log:     "exeErrorCode": 0,
2025-04-02 18:49:56 (20304): Guest Log:     "exeErrorDiag": "",
2025-04-02 18:49:56 (20304): Guest Log:     "pilotErrorCode": 0,
2025-04-02 18:49:56 (20304): Guest Log:     "pilotErrorDiag": "",
2025-04-02 18:49:56 (20304): Guest Log:  *** Listing of results directory ***
2025-04-02 18:49:56 (20304): Guest Log: total 333272
2025-04-02 18:49:56 (20304): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Apr  1 17:03 queuedata.json
2025-04-02 18:49:56 (20304): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  1 17:05 runpilot2-wrapper.sh
2025-04-02 18:49:56 (20304): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Apr  1 17:05 pilot3.tar.gz
2025-04-02 18:49:56 (20304): Guest Log: -rwxr-xr-x. 1 atlas atlas      8289 Apr  1 21:32 init_data.xml
2025-04-02 18:49:56 (20304): Guest Log: -rwxr-xr-x. 1 atlas atlas    507245 Apr  1 21:32 input.tar.gz
2025-04-02 18:49:56 (20304): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  1 21:32 start_atlas.sh
2025-04-02 18:49:56 (20304): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  1 21:32 EVNT.43634896._000533.pool.root.1 -> /data/./ATLAS.root_0
2025-04-02 18:49:56 (20304): Guest Log: -rw-r--r--. 1 atlas atlas      2595 Apr  1 21:33 pandaJob.out
2025-04-02 18:49:56 (20304): Guest Log: -rw-------. 1 atlas atlas       424 Apr  1 21:33 setup.sh.local
2025-04-02 18:49:56 (20304): Guest Log: -rw-------. 1 atlas atlas    989902 Apr  1 21:34 agis_schedconf.cvmfs.json
2025-04-02 18:49:56 (20304): Guest Log: drwx------. 4 atlas atlas      4096 Apr  1 21:34 pilot3
2025-04-02 18:49:56 (20304): Guest Log: -rw-------. 1 atlas atlas 317870226 Apr  2 16:47 HITS.43634898._006520.pool.root.1
2025-04-02 18:49:56 (20304): Guest Log: -rw-------. 1 atlas atlas        96 Apr  2 16:48 pilot_heartbeat.json
2025-04-02 18:49:56 (20304): Guest Log: -rw-------. 1 atlas atlas      1030 Apr  2 16:49 memory_monitor_summary.json
2025-04-02 18:49:56 (20304): Guest Log: -rw-------. 1 atlas atlas   1603449 Apr  2 16:49 agis_ddmendpoints.agis.ALL.json
2025-04-02 18:49:56 (20304): Guest Log: -rw-------. 1 atlas atlas    945746 Apr  2 16:49 log.43634898._006520.job.log.tgz.1
2025-04-02 18:49:56 (20304): Guest Log: -rw-------. 1 atlas atlas      7728 Apr  2 16:49 heartbeat.json
2025-04-02 18:49:56 (20304): Guest Log: -rw-------. 1 atlas atlas      4465 Apr  2 16:49 pilotlog.txt
2025-04-02 18:49:56 (20304): Guest Log: -rw-------. 1 atlas atlas   8868960 Apr  2 16:49 log.43634898._006520.job.log.1
2025-04-02 18:49:56 (20304): Guest Log: -rw-------. 1 atlas atlas       357 Apr  2 16:49 output.list
2025-04-02 18:49:56 (20304): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  2 16:49 runtime_log
2025-04-02 18:49:56 (20304): Guest Log: -rw-------. 1 atlas atlas   9830400 Apr  2 16:49 result.tar.gz
2025-04-02 18:49:56 (20304): Guest Log: -rw-r--r--. 1 atlas atlas     11033 Apr  2 16:49 runtime_log.err
2025-04-02 18:49:56 (20304): Guest Log: -rw-------. 1 atlas atlas       691 Apr  2 16:49 QWJKDmYEuJ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmn7DLDmZwtANm.diag
2025-04-02 18:49:56 (20304): Guest Log: Looking for outputfile HITS.43634898._006520.pool.root.1
2025-04-02 18:49:56 (20304): Guest Log: HITS file was successfully produced
2025-04-02 18:49:56 (20304): Guest Log: -rw-------. 1 atlas atlas 317870226 Apr  2 16:47 /home/atlas/RunAtlas/HITS.43634898._006520.pool.root.1
2025-04-02 18:49:59 (20304): Guest Log: Successfully finished the ATLAS job!
2025-04-02 18:49:59 (20304): Guest Log: Copying the results back to the shared directory!
2025-04-02 18:49:59 (20304): Guest Log:  *** Contents of shared directory: ***
2025-04-02 18:49:59 (20304): Guest Log: total 671572
2025-04-02 18:49:59 (20304): Guest Log: -rwxrwxrwx. 1 root root 359442011 Apr  1 21:31 ATLAS.root_0
2025-04-02 18:49:59 (20304): Guest Log: -rwxrwxrwx. 1 root root 317870226 Apr  2 16:49 HITS.pool.root.1
2025-04-02 18:49:59 (20304): Guest Log: -rwxrwxrwx. 1 root root      8289 Apr  1 21:31 init_data.xml
2025-04-02 18:49:59 (20304): Guest Log: -rwxrwxrwx. 1 root root    507245 Apr  1 21:31 input.tar.gz
2025-04-02 18:49:59 (20304): Guest Log: -rwxrwxrwx. 1 root root   9830400 Apr  2 16:49 result.tar.gz
2025-04-02 18:49:59 (20304): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  1 21:31 start_atlas.sh
2025-04-02 18:49:59 (20304): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-02 18:49:59 (20304): VM Completion File Detected.
2025-04-02 18:49:59 (20304): Powering off VM.
2025-04-02 18:50:00 (20304): Successfully stopped VM.
2025-04-02 18:50:00 (20304): Deregistering VM. (boinc_3b5aa9d05e940f00, slot#3)
2025-04-02 18:50:00 (20304): Removing network bandwidth throttle group from VM.
2025-04-02 18:50:01 (20304): Removing VM from VirtualBox.
18:50:06 (20304): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN