Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:36:38 (7372): wrapper (7.7.26015): starting
16:36:38 (7372): wrapper: running run_atlas (--nthreads 8)
[2025-04-02 16:36:38] Arguments: --nthreads 8
[2025-04-02 16:36:38] Threads: 8
[2025-04-02 16:36:38] Checking for CVMFS
[2025-04-02 16:36:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-02 16:36:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-02 16:36:38] Running cvmfs_config stat atlas.cern.ch
[2025-04-02 16:36:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-02 16:36:39] 2.11.2.0 22880 99483 80288 144410 2 109 19672338 25165824 1840 130560 0 29253954 99.877 25236118 5705 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-04-02 16:36:39] CVMFS is ok
[2025-04-02 16:36:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-02 16:36:39] Checking for apptainer binary...
[2025-04-02 16:36:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-02 16:36:39] Running /usr/bin/apptainer --version
[2025-04-02 16:36:39] apptainer version 1.3.2-1.el7
[2025-04-02 16:36:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-02 16:37:01] cg-vwn348.simple-grid.lan
[2025-04-02 16:37:01] apptainer works
[2025-04-02 16:37:01] Set ATHENA_PROC_NUMBER=8
[2025-04-02 16:37:01] Set ATHENA_CORE_NUMBER=8
[2025-04-02 16:37:02] Starting ATLAS job with PandaID=6582532323
[2025-04-02 16:37:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-02 23:39:20]  *** The last 200 lines of the pilot log: ***
[2025-04-02 23:39:20] 2025-04-02 21:38:58,347 | INFO     | chi2: 6.3234824290579565
[2025-04-02 23:39:20] 2025-04-02 21:38:58,347 | INFO     | model: linear, x: [1743605179.0, 1743605240.0, 1743605301.0, 1743605362.0, 1743605423.0, 1743605484.0, 1743605545.0, 1743605606.0, 1743605667.0, 1743605728.0, 1743
[2025-04-02 23:39:20] 2025-04-02 21:38:58,347 | INFO     | sum of square deviations: 19994421400.0
[2025-04-02 23:39:20] 2025-04-02 21:38:58,352 | INFO     | sum of deviations: 315523014291.00006
[2025-04-02 23:39:20] 2025-04-02 21:38:58,353 | INFO     | mean x: 1743617379.0
[2025-04-02 23:39:20] 2025-04-02 21:38:58,353 | INFO     | mean y: 2510584.902743142
[2025-04-02 23:39:20] 2025-04-02 21:38:58,353 | INFO     | -- intersect: -27512734802.10571
[2025-04-02 23:39:20] 2025-04-02 21:38:58,353 | INFO     | intersect: -27512734802.10571
[2025-04-02 23:39:20] 2025-04-02 21:38:58,353 | INFO     | chi2: 5.5685938073256995
[2025-04-02 23:39:20] 2025-04-02 21:38:58,354 | INFO     | current chi2=5.5685938073256995 (change=11.937862249183427 %)
[2025-04-02 23:39:20] 2025-04-02 21:38:58,354 | INFO     | right removable region: 400
[2025-04-02 23:39:20] 2025-04-02 21:38:58,354 | INFO     | model: linear, x: [1743605484.0, 1743605545.0, 1743605606.0, 1743605667.0, 1743605728.0, 1743605789.0, 1743605850.0, 1743605911.0, 1743605972.0, 1743606033.0, 1743
[2025-04-02 23:39:20] 2025-04-02 21:38:58,355 | INFO     | sum of square deviations: 19994421400.0
[2025-04-02 23:39:20] 2025-04-02 21:38:58,360 | INFO     | sum of deviations: 168305905383.0
[2025-04-02 23:39:20] 2025-04-02 21:38:58,360 | INFO     | mean x: 1743617684.0
[2025-04-02 23:39:20] 2025-04-02 21:38:58,360 | INFO     | mean y: 2530813.91521197
[2025-04-02 23:39:20] 2025-04-02 21:38:58,360 | INFO     | -- intersect: -14674620731.336784
[2025-04-02 23:39:20] 2025-04-02 21:38:58,360 | INFO     | intersect: -14674620731.336784
[2025-04-02 23:39:20] 2025-04-02 21:38:58,361 | INFO     | chi2: 2.8580602765735517
[2025-04-02 23:39:20] 2025-04-02 21:38:58,361 | INFO     | current chi2=2.8580602765735517 (change=54.80243190935327 %)
[2025-04-02 23:39:20] 2025-04-02 21:38:58,362 | INFO     | model: linear, x: [1743605789.0, 1743605850.0, 1743605911.0, 1743605972.0, 1743606033.0, 1743606094.0, 1743606155.0, 1743606216.0, 1743606277.0, 1743606338.0, 1743
[2025-04-02 23:39:20] 2025-04-02 21:38:58,362 | INFO     | sum of square deviations: 19255784295.0
[2025-04-02 23:39:20] 2025-04-02 21:38:58,367 | INFO     | sum of deviations: 88641743221.5
[2025-04-02 23:39:20] 2025-04-02 21:38:58,367 | INFO     | mean x: 1743617836.5
[2025-04-02 23:39:20] 2025-04-02 21:38:58,367 | INFO     | mean y: 2547257.856060606
[2025-04-02 23:39:20] 2025-04-02 21:38:58,367 | INFO     | -- intersect: -8023992828.573608
[2025-04-02 23:39:20] 2025-04-02 21:38:58,367 | INFO     | intersect: -8023992828.573608
[2025-04-02 23:39:20] 2025-04-02 21:38:58,368 | INFO     | chi2: 1.5591837291364539
[2025-04-02 23:39:20] 2025-04-02 21:38:58,368 | INFO     | current chi2=1.5591837291364539 (change=45.44608656729537 %)
[2025-04-02 23:39:20] 2025-04-02 21:38:58,369 | INFO     | model: linear, x: [1743606094.0, 1743606155.0, 1743606216.0, 1743606277.0, 1743606338.0, 1743606399.0, 1743606460.0, 1743606521.0, 1743606582.0, 1743606643.0, 1743
[2025-04-02 23:39:20] 2025-04-02 21:38:58,369 | INFO     | sum of square deviations: 18535566140.0
[2025-04-02 23:39:20] 2025-04-02 21:38:58,374 | INFO     | sum of deviations: 32764925608.0
[2025-04-02 23:39:20] 2025-04-02 21:38:58,374 | INFO     | mean x: 1743617989.0
[2025-04-02 23:39:20] 2025-04-02 21:38:58,374 | INFO     | mean y: 2559056.652173913
[2025-04-02 23:39:20] 2025-04-02 21:38:58,375 | INFO     | -- intersect: -3079597337.5390615
[2025-04-02 23:39:20] 2025-04-02 21:38:58,375 | INFO     | intersect: -3079597337.5390615
[2025-04-02 23:39:20] 2025-04-02 21:38:58,375 | INFO     | chi2: 0.8109268886136873
[2025-04-02 23:39:20] 2025-04-02 21:38:58,376 | INFO     | current chi2=0.8109268886136873 (change=47.99029303218709 %)
[2025-04-02 23:39:20] 2025-04-02 21:38:58,376 | INFO     | model: linear, x: [1743606399.0, 1743606460.0, 1743606521.0, 1743606582.0, 1743606643.0, 1743606704.0, 1743606765.0, 1743606826.0, 1743606887.0, 1743606948.0, 1743
[2025-04-02 23:39:20] 2025-04-02 21:38:58,376 | INFO     | sum of square deviations: 17833534372.5
[2025-04-02 23:39:20] 2025-04-02 21:38:58,382 | INFO     | sum of deviations: 24733391443.500053
[2025-04-02 23:39:20] 2025-04-02 21:38:58,382 | INFO     | mean x: 1743618141.5
[2025-04-02 23:39:20] 2025-04-02 21:38:58,382 | INFO     | mean y: 2560801.1321243523
[2025-04-02 23:39:20] 2025-04-02 21:38:58,382 | INFO     | -- intersect: -2415669322.0121074
[2025-04-02 23:39:20] 2025-04-02 21:38:58,382 | INFO     | intersect: -2415669322.0121074
[2025-04-02 23:39:20] 2025-04-02 21:38:58,383 | INFO     | chi2: 0.8021005424434039
[2025-04-02 23:39:20] 2025-04-02 21:38:58,383 | INFO     | current chi2=0.8021005424434039 (change=1.088426872288381 %)
[2025-04-02 23:39:20] 2025-04-02 21:38:58,383 | INFO     | left removable region: 40
[2025-04-02 23:39:20] 2025-04-02 21:38:58,384 | INFO     | model: linear, x: [1743607619.0, 1743607680.0, 1743607741.0, 1743607802.0, 1743607863.0, 1743607924.0, 1743607985.0, 1743608046.0, 1743608107.0, 1743608168.0, 1743
[2025-04-02 23:39:20] 2025-04-02 21:38:58,384 | INFO     | sum of square deviations: 14467136370.0
[2025-04-02 23:39:20] 2025-04-02 21:38:58,388 | INFO     | sum of deviations: 28237706145.500004
[2025-04-02 23:39:20] 2025-04-02 21:38:58,388 | INFO     | mean x: 1743618568.5
[2025-04-02 23:39:20] 2025-04-02 21:38:58,388 | INFO     | mean y: 2571540.163888889
[2025-04-02 23:39:20] 2025-04-02 21:38:58,389 | INFO     | -- intersect: -3400713498.9706645
[2025-04-02 23:39:20] 2025-04-02 21:38:58,389 | INFO     | intersect: -3400713498.9706645
[2025-04-02 23:39:20] 2025-04-02 21:38:58,389 | INFO     | chi2: 0.0016921702454244139
[2025-04-02 23:39:20] 2025-04-02 21:38:58,390 | INFO     | -- intersect: -3400713498.9706645
[2025-04-02 23:39:20] 2025-04-02 21:38:58,390 | INFO     | current memory leak: 1.95 B/s (using 360 data points, chi2=0.00)
[2025-04-02 23:39:20] 2025-04-02 21:38:58,391 | INFO     | ..............................
[2025-04-02 23:39:20] 2025-04-02 21:38:58,392 | INFO     | . Timing measurements:
[2025-04-02 23:39:20] 2025-04-02 21:38:58,392 | INFO     | . get job = 0 s
[2025-04-02 23:39:20] 2025-04-02 21:38:58,392 | INFO     | . initial setup = 5 s
[2025-04-02 23:39:20] 2025-04-02 21:38:58,392 | INFO     | . payload setup = 84 s
[2025-04-02 23:39:20] 2025-04-02 21:38:58,392 | INFO     | . stage-in = 0 s
[2025-04-02 23:39:20] 2025-04-02 21:38:58,392 | INFO     | . payload execution = 24858 s
[2025-04-02 23:39:20] 2025-04-02 21:38:58,392 | INFO     | . stage-out = 2 s
[2025-04-02 23:39:20] 2025-04-02 21:38:58,392 | INFO     | . log creation = 0 s
[2025-04-02 23:39:20] 2025-04-02 21:38:58,393 | INFO     | ..............................
[2025-04-02 23:39:20] 2025-04-02 21:38:58,525 | INFO     | 
[2025-04-02 23:39:20] 2025-04-02 21:38:58,525 | INFO     | job summary report
[2025-04-02 23:39:20] 2025-04-02 21:38:58,525 | INFO     | --------------------------------------------------
[2025-04-02 23:39:20] 2025-04-02 21:38:58,525 | INFO     | PanDA job id: 6582532323
[2025-04-02 23:39:20] 2025-04-02 21:38:58,526 | INFO     | task id: 43634898
[2025-04-02 23:39:20] 2025-04-02 21:38:58,526 | INFO     | errors: (none)
[2025-04-02 23:39:20] 2025-04-02 21:38:58,526 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-02 23:39:20] 2025-04-02 21:38:58,526 | INFO     | pilot state: finished 
[2025-04-02 23:39:20] 2025-04-02 21:38:58,526 | INFO     | transexitcode: 0
[2025-04-02 23:39:20] 2025-04-02 21:38:58,526 | INFO     | exeerrorcode: 0
[2025-04-02 23:39:20] 2025-04-02 21:38:58,526 | INFO     | exeerrordiag: 
[2025-04-02 23:39:20] 2025-04-02 21:38:58,526 | INFO     | exitcode: 0
[2025-04-02 23:39:20] 2025-04-02 21:38:58,526 | INFO     | exitmsg: OK
[2025-04-02 23:39:20] 2025-04-02 21:38:58,527 | INFO     | cpuconsumptiontime: 96454 s
[2025-04-02 23:39:20] 2025-04-02 21:38:58,527 | INFO     | nevents: 400
[2025-04-02 23:39:20] 2025-04-02 21:38:58,527 | INFO     | neventsw: 0
[2025-04-02 23:39:20] 2025-04-02 21:38:58,527 | INFO     | pid: 26419
[2025-04-02 23:39:20] 2025-04-02 21:38:58,527 | INFO     | pgrp: 26419
[2025-04-02 23:39:20] 2025-04-02 21:38:58,527 | INFO     | corecount: 8
[2025-04-02 23:39:20] 2025-04-02 21:38:58,527 | INFO     | event service: False
[2025-04-02 23:39:20] 2025-04-02 21:38:58,527 | INFO     | sizes: {0: 2410881, 1: 2411080, 12: 2411080, 22: 2411108, 33: 2411136, 44: 2411192, 54: 2411348, 65: 2411376, 71: 2411610, 76: 2411638, 24947: 2447455, 24949: 2462
[2025-04-02 23:39:20] 2025-04-02 21:38:58,527 | INFO     | --------------------------------------------------
[2025-04-02 23:39:20] 2025-04-02 21:38:58,528 | INFO     | 
[2025-04-02 23:39:20] 2025-04-02 21:38:58,528 | INFO     | executing command: ls -lF /var/lib/boinc/slots/28
[2025-04-02 23:39:20] 2025-04-02 21:38:58,618 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,618 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,619 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,619 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,619 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,619 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,619 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,620 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,620 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,620 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,620 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,620 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,621 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-02 23:39:20] 2025-04-02 21:38:58,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,621 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-02 23:39:20] 2025-04-02 21:38:58,621 | INFO     | job 6582532323 has completed (purged errors)
[2025-04-02 23:39:20] 2025-04-02 21:38:58,621 | INFO     | overall cleanup function is called
[2025-04-02 23:39:20] 2025-04-02 21:38:59,630 | INFO     | --- collectZombieJob: --- 10, [26419]
[2025-04-02 23:39:20] 2025-04-02 21:38:59,630 | INFO     | zombie collector waiting for pid 26419
[2025-04-02 23:39:20] 2025-04-02 21:38:59,630 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-02 23:39:20] 2025-04-02 21:38:59,630 | INFO     | collected zombie processes
[2025-04-02 23:39:20] 2025-04-02 21:38:59,630 | INFO     | will attempt to kill all subprocesses of pid=26419
[2025-04-02 23:39:20] 2025-04-02 21:39:00,024 | INFO     | process IDs to be killed: [26419] (in reverse order)
[2025-04-02 23:39:20] 2025-04-02 21:39:00,167 | WARNING  | found no corresponding commands to process id(s)
[2025-04-02 23:39:20] 2025-04-02 21:39:00,167 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-02 23:39:20] 2025-04-02 21:39:00,178 | INFO     | did not find any defunct processes belonging to 26419
[2025-04-02 23:39:20] 2025-04-02 21:39:00,184 | INFO     | did not find any defunct processes belonging to 26419
[2025-04-02 23:39:20] 2025-04-02 21:39:00,184 | INFO     | ready for new job
[2025-04-02 23:39:20] 2025-04-02 21:39:00,185 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-02 23:39:20] 2025-04-02 21:39:00,187 | INFO     | ***************************************
[2025-04-02 23:39:20] 2025-04-02 21:39:00,187 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-02 23:39:20] 2025-04-02 21:39:00,187 | INFO     | ***************************************
[2025-04-02 23:39:20] 2025-04-02 21:39:00,187 | INFO     | 
[2025-04-02 23:39:20] 2025-04-02 21:39:00,188 | INFO     | pilot is running in a VM
[2025-04-02 23:39:20] 2025-04-02 21:39:00,188 | INFO     | architecture information:
[2025-04-02 23:39:20] 2025-04-02 21:39:00,188 | INFO     | executing command: cat /etc/os-release
[2025-04-02 23:39:20] 2025-04-02 21:39:00,305 | INFO     | cat /etc/os-release:
[2025-04-02 23:39:20] NAME="CentOS Linux"
[2025-04-02 23:39:20] VERSION="7 (Core)"
[2025-04-02 23:39:20] ID="centos"
[2025-04-02 23:39:20] ID_LIKE="rhel fedora"
[2025-04-02 23:39:20] VERSION_ID="7"
[2025-04-02 23:39:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-02 23:39:20] ANSI_COLOR="0;31"
[2025-04-02 23:39:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-02 23:39:20] HOME_URL="https://www.centos.org/"
[2025-04-02 23:39:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-02 23:39:20] 
[2025-04-02 23:39:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-02 23:39:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-02 23:39:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-02 23:39:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-02 23:39:20] 
[2025-04-02 23:39:20] 2025-04-02 21:39:00,305 | INFO     | ***************************************
[2025-04-02 23:39:20] 2025-04-02 21:39:00,808 | INFO     | executing command: df -mP /var/lib/boinc/slots/28
[2025-04-02 23:39:20] 2025-04-02 21:39:00,837 | INFO     | sufficient remaining disk space (386828075008 B)
[2025-04-02 23:39:20] 2025-04-02 21:39:00,837 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-02 23:39:20] 2025-04-02 21:39:00,838 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-02 23:39:20] 2025-04-02 21:39:01,016 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-02 23:39:20] 2025-04-02 21:39:01,016 | INFO     | aborting loop
[2025-04-02 23:39:20] 2025-04-02 21:39:01,327 | INFO     | all payload control threads have been joined
[2025-04-02 23:39:20] 2025-04-02 21:39:01,652 | INFO     | all data control threads have been joined
[2025-04-02 23:39:20] 2025-04-02 21:39:01,718 | INFO     | found 0 job(s) in 20 queues
[2025-04-02 23:39:20] 2025-04-02 21:39:01,718 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-02 23:39:20] 2025-04-02 21:39:01,718 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-02 23:39:20] 2025-04-02 21:39:01,822 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-02 23:39:20] 2025-04-02 21:39:01,845 | INFO     | [job] retrieve thread has finished
[2025-04-02 23:39:20] 2025-04-02 21:39:02,021 | INFO     | [job] job monitor thread has finished
[2025-04-02 23:39:20] 2025-04-02 21:39:02,091 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-02 23:39:20] 2025-04-02 21:39:02,113 | INFO     | [payload] validate_post thread has finished
[2025-04-02 23:39:20] 2025-04-02 21:39:02,175 | INFO     | [job] validate thread has finished
[2025-04-02 23:39:20] 2025-04-02 21:39:02,188 | INFO     | [payload] validate_pre thread has finished
[2025-04-02 23:39:20] 2025-04-02 21:39:02,333 | INFO     | [payload] control thread has finished
[2025-04-02 23:39:20] 2025-04-02 21:39:02,421 | INFO     | [job] create_data_payload thread has finished
[2025-04-02 23:39:20] 2025-04-02 21:39:02,527 | INFO     | all job control threads have been joined
[2025-04-02 23:39:20] 2025-04-02 21:39:02,579 | INFO     | [payload] execute_payloads thread has finished
[2025-04-02 23:39:20] 2025-04-02 21:39:02,658 | INFO     | [data] control thread has finished
[2025-04-02 23:39:20] 2025-04-02 21:39:02,811 | INFO     | [payload] failed_post thread has finished
[2025-04-02 23:39:20] 2025-04-02 21:39:03,314 | INFO     | [data] copytool_in thread has finished
[2025-04-02 23:39:20] 2025-04-02 21:39:03,533 | INFO     | [job] control thread has finished
[2025-04-02 23:39:20] 2025-04-02 21:39:03,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-02 23:39:20] 2025-04-02 21:39:04,098 | INFO     | [data] copytool_out thread has finished
[2025-04-02 23:39:20] 2025-04-02 21:39:04,546 | INFO     | [job] queue monitor thread has finished
[2025-04-02 23:39:20] 2025-04-02 21:39:05,830 | INFO     | [data] queue_monitor thread has finished
[2025-04-02 23:39:20] 2025-04-02 21:39:11,326 | INFO     | job.realtimelogging is not enabled
[2025-04-02 23:39:20] 2025-04-02 21:39:12,331 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-02 23:39:20] 2025-04-02 21:39:13,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139843687860032)>', '<ExcThread(monitor, started 139843103344384)>']
[2025-04-02 23:39:20] 2025-04-02 21:39:13,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-02 23:39:20] 2025-04-02 21:39:13,788 | INFO     | [monitor] control thread has ended
[2025-04-02 23:39:20] 2025-04-02 21:39:18,130 | INFO     | all workflow threads have been joined
[2025-04-02 23:39:20] 2025-04-02 21:39:18,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-02 23:39:20] 2025-04-02 21:39:18,130 | INFO     | traces error code: 0
[2025-04-02 23:39:20] 2025-04-02 21:39:18,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-02 23:39:20] 2025-04-02 21:39:18,296 [wrapper] ==== pilot stdout END ====
[2025-04-02 23:39:20] 2025-04-02 21:39:18,312 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-02 23:39:20] 2025-04-02 21:39:18,362 [wrapper] pilotpid: 17394
[2025-04-02 23:39:20] 2025-04-02 21:39:18,406 [wrapper] Pilot exit status: 0
[2025-04-02 23:39:20] 2025-04-02 21:39:18,600 [wrapper] pandaids: 6582532323
[2025-04-02 23:39:20] 2025-04-02 21:39:18,663 [wrapper] cleanup supervisor_pilot  3327 17395
[2025-04-02 23:39:20] 2025-04-02 21:39:18,678 [wrapper] Test setup, not cleaning
[2025-04-02 23:39:20] 2025-04-02 21:39:18,691 [wrapper] apfmon messages muted
[2025-04-02 23:39:20] 2025-04-02 21:39:18,707 [wrapper] ==== wrapper stdout END ====
[2025-04-02 23:39:20] 2025-04-02 21:39:18,727 [wrapper] ==== wrapper stderr END ====
[2025-04-02 23:39:20]  *** Error codes and diagnostics ***
[2025-04-02 23:39:20]     "exeErrorCode": 0,
[2025-04-02 23:39:20]     "exeErrorDiag": "",
[2025-04-02 23:39:20]     "pilotErrorCode": 0,
[2025-04-02 23:39:20]     "pilotErrorDiag": "",
[2025-04-02 23:39:20]  *** Listing of results directory ***
[2025-04-02 23:39:20] total 672776
[2025-04-02 23:39:20] -rw-r--r--. 1 boinc boinc    494584 Apr  1 18:47 pilot3.tar.gz
[2025-04-02 23:39:20] -rwx------. 1 boinc boinc     37140 Apr  1 18:52 runpilot2-wrapper.sh
[2025-04-02 23:39:20] -rw-r--r--. 1 boinc boinc      5112 Apr  1 18:52 queuedata.json
[2025-04-02 23:39:20] -rw-r--r--. 1 boinc boinc       100 Apr  2 16:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-02 23:39:20] -rwxr-xr-x. 1 boinc boinc      7986 Apr  2 16:36 run_atlas
[2025-04-02 23:39:20] -rw-r--r--. 1 boinc boinc       105 Apr  2 16:36 job.xml
[2025-04-02 23:39:20] -rw-r--r--. 2 boinc boinc 356544913 Apr  2 16:36 EVNT.43634896._000531.pool.root.1
[2025-04-02 23:39:20] -rw-r--r--. 1 boinc boinc      6315 Apr  2 16:36 init_data.xml
[2025-04-02 23:39:20] -rw-r--r--. 2 boinc boinc     17571 Apr  2 16:36 start_atlas.sh
[2025-04-02 23:39:20] drwxrwx--x. 2 boinc boinc        68 Apr  2 16:36 shared
[2025-04-02 23:39:20] -rw-r--r--. 2 boinc boinc    507245 Apr  2 16:36 input.tar.gz
[2025-04-02 23:39:20] -rw-r--r--. 1 boinc boinc         0 Apr  2 16:36 boinc_lockfile
[2025-04-02 23:39:20] -rw-r--r--. 1 boinc boinc      2594 Apr  2 16:37 pandaJob.out
[2025-04-02 23:39:20] -rw-------. 1 boinc boinc       424 Apr  2 16:37 setup.sh.local
[2025-04-02 23:39:20] -rw-------. 1 boinc boinc    989869 Apr  2 16:40 agis_schedconf.cvmfs.json
[2025-04-02 23:39:20] drwx------. 4 boinc boinc      4096 Apr  2 16:40 pilot3
[2025-04-02 23:39:20] -rw-------. 1 boinc boinc 321629216 Apr  2 23:37 HITS.43634898._006453.pool.root.1
[2025-04-02 23:39:20] -rw-r--r--. 1 boinc boinc       532 Apr  2 23:37 boinc_task_state.xml
[2025-04-02 23:39:20] -rw-------. 1 boinc boinc      1017 Apr  2 23:38 memory_monitor_summary.json
[2025-04-02 23:39:20] -rw-------. 1 boinc boinc   1603449 Apr  2 23:38 agis_ddmendpoints.agis.ALL.json
[2025-04-02 23:39:20] -rw-------. 1 boinc boinc    513981 Apr  2 23:38 log.43634898._006453.job.log.tgz.1
[2025-04-02 23:39:20] -rw-------. 1 boinc boinc        95 Apr  2 23:38 pilot_heartbeat.json
[2025-04-02 23:39:20] -rw-------. 1 boinc boinc      7682 Apr  2 23:38 heartbeat.json
[2025-04-02 23:39:20] -rw-r--r--. 1 boinc boinc      8192 Apr  2 23:39 boinc_mmap_file
[2025-04-02 23:39:20] -rw-r--r--. 1 boinc boinc        28 Apr  2 23:39 wrapper_checkpoint.txt
[2025-04-02 23:39:20] -rw-------. 1 boinc boinc      4355 Apr  2 23:39 pilotlog.txt
[2025-04-02 23:39:20] -rw-------. 1 boinc boinc   2949021 Apr  2 23:39 log.43634898._006453.job.log.1
[2025-04-02 23:39:20] -rw-------. 1 boinc boinc       357 Apr  2 23:39 output.list
[2025-04-02 23:39:20] -rw-r--r--. 1 boinc boinc       620 Apr  2 23:39 runtime_log
[2025-04-02 23:39:20] -rw-------. 1 boinc boinc   3481600 Apr  2 23:39 result.tar.gz
[2025-04-02 23:39:20] -rw-r--r--. 1 boinc boinc     11032 Apr  2 23:39 runtime_log.err
[2025-04-02 23:39:20] -rw-------. 1 boinc boinc       658 Apr  2 23:39 jktNDmr1tJ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm9HrKDmvSSGLm.diag
[2025-04-02 23:39:20] -rw-r--r--. 1 boinc boinc     21248 Apr  2 23:39 stderr.txt
[2025-04-02 23:39:20] HITS file was successfully produced:
[2025-04-02 23:39:20] -rw-------. 1 boinc boinc 321629216 Apr  2 23:37 shared/HITS.pool.root.1
[2025-04-02 23:39:20]  *** Contents of shared directory: ***
[2025-04-02 23:39:20] total 666200
[2025-04-02 23:39:20] -rw-r--r--. 2 boinc boinc 356544913 Apr  2 16:36 ATLAS.root_0
[2025-04-02 23:39:20] -rw-r--r--. 2 boinc boinc     17571 Apr  2 16:36 start_atlas.sh
[2025-04-02 23:39:20] -rw-r--r--. 2 boinc boinc    507245 Apr  2 16:36 input.tar.gz
[2025-04-02 23:39:20] -rw-------. 1 boinc boinc 321629216 Apr  2 23:37 HITS.pool.root.1
[2025-04-02 23:39:20] -rw-------. 1 boinc boinc   3481600 Apr  2 23:39 result.tar.gz
23:39:22 (7372): run_atlas exited; CPU time 96481.338915
23:39:22 (7372): called boinc_finish(0)

</stderr_txt>
]]>

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