Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-02 04:26:53 (109328): Detected: vboxwrapper 26206
2025-04-02 04:26:53 (109328): Detected: BOINC client v8.0.2
2025-04-02 04:26:53 (109328): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-02 04:26:53 (109328): Successfully copied 'init_data.xml' to the shared directory.
2025-04-02 04:26:54 (109328): Create VM. (boinc_44bfc8ed00db5e07, slot#3)
2025-04-02 04:26:54 (109328): Setting Memory Size for VM. (4400MB)
2025-04-02 04:26:55 (109328): Setting CPU Count for VM. (4)
2025-04-02 04:26:55 (109328): Setting Chipset Options for VM.
2025-04-02 04:26:55 (109328): Setting Graphics Controller Options for VM.
2025-04-02 04:26:55 (109328): Setting Boot Options for VM.
2025-04-02 04:26:56 (109328): Setting Network Configuration for NAT.
2025-04-02 04:26:56 (109328): Enabling VM Network Access.
2025-04-02 04:26:56 (109328): Disabling USB Support for VM.
2025-04-02 04:26:57 (109328): Disabling COM Port Support for VM.
2025-04-02 04:26:57 (109328): Disabling LPT Port Support for VM.
2025-04-02 04:26:57 (109328): Disabling Audio Support for VM.
2025-04-02 04:26:57 (109328): Disabling Clipboard Support for VM.
2025-04-02 04:26:58 (109328): Disabling Drag and Drop Support for VM.
2025-04-02 04:26:58 (109328): Adding storage controller(s) to VM.
2025-04-02 04:26:58 (109328): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-02 04:26:59 (109328): Adding VirtualBox Guest Additions to VM.
2025-04-02 04:26:59 (109328): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-02 04:26:59 (109328): forwarding host port 52187 to guest port 80
2025-04-02 04:26:59 (109328): Enabling remote desktop for VM.
2025-04-02 04:27:00 (109328): Required extension pack not installed, remote desktop not enabled.
2025-04-02 04:27:00 (109328): Enabling shared directory for VM.
2025-04-02 04:27:00 (109328): Starting VM using VBoxManage interface. (boinc_44bfc8ed00db5e07, slot#3)
2025-04-02 04:27:04 (109328): Successfully started VM. (PID = '8296')
2025-04-02 04:27:04 (109328): Reporting VM Process ID to BOINC.
2025-04-02 04:27:04 (109328): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-02 04:27:04 (109328): Guest Log: CPUID EDX: 0x178bfbff
2025-04-02 04:27:04 (109328): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-02 04:27:04 (109328): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-02 04:27:04 (109328): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-02 04:27:04 (109328): Detected: Web Application Enabled (http://localhost:52187)
2025-04-02 04:27:04 (109328): Preference change detected
2025-04-02 04:27:04 (109328): Setting CPU throttle for VM. (100%)
2025-04-02 04:27:05 (109328): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-02 04:27:06 (109328): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-02 04:27:06 (109328): Guest Log: BIOS: Booting from Hard Disk...
2025-04-02 04:27:09 (109328): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-02 04:27:09 (109328): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-02 04:27:09 (109328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-02 04:27:13 (109328): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-02 04:27:13 (109328): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-02 04:27:16 (109328): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-02 04:27:16 (109328): Guest Log: 00:00:00.000070 main     Log opened 2025-04-02T04:27:14.713335000Z
2025-04-02 04:27:16 (109328): Guest Log: 00:00:00.000128 main     OS Product: Linux
2025-04-02 04:27:16 (109328): Guest Log: 00:00:00.000140 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-02 04:27:16 (109328): Guest Log: 00:00:00.000149 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-02 04:27:16 (109328): Guest Log: 00:00:00.000159 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-02 04:27:16 (109328): Guest Log: 00:00:00.000160 main     Process ID: 1306
2025-04-02 04:27:16 (109328): Guest Log: 00:00:00.000160 main     Package type: LINUX_64BITS_GENERIC
2025-04-02 04:27:16 (109328): Guest Log: 00:00:00.000493 main     5.2.32 r132073 started. Verbose level = 0
2025-04-02 04:27:16 (109328): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-02 04:27:16 (109328): Guest Log: [INFO] Mounting shared directory
2025-04-02 04:27:16 (109328): Guest Log: [INFO] Checking for init_data.xml
2025-04-02 04:27:18 (109328): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-02 04:27:18 (109328): Guest Log: [INFO] Detected branch: prod
2025-04-02 04:27:18 (109328): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-02 04:27:18 (109328): Guest Log: Copying input files
2025-04-02 04:27:19 (109328): Guest Log: Copied input files into RunAtlas.
2025-04-02 04:27:19 (109328): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-02 04:27:19 (109328): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-02 04:27:19 (109328): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-02 04:27:19 (109328): Guest Log: Further information can be found at the LHC@home message board.
2025-04-02 04:27:25 (109328): Guest Log: 00:00:10.001556 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 317 301 000ns (GuestNow=1 743 557 246 397 204 000 ns GuestLast=1 743 568 034 714 505 000 ns fSetTimeLastLoop=true )
2025-04-02 04:27:26 (109328): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-02 04:27:26 (109328): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-02 04:27:26 (109328): Guest Log: 2.6.3.0 1581 0 30172 144387 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-02 04:27:27 (109328): Guest Log: copied the webapp to /var/www
2025-04-02 04:27:27 (109328): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-02 04:27:27 (109328): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-02 04:27:27 (109328): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-02 04:27:27 (109328): Guest Log:  *** Starting ATLAS job. (PandaID=6582470755 taskID=43634898) ***
2025-04-02 06:07:07 (109328): Status Report: Elapsed Time: '6000.000000'
2025-04-02 06:07:07 (109328): Status Report: CPU Time: '20756.656250'
2025-04-02 07:37:34 (109328): Guest Log:  *** Job finished ***
2025-04-02 07:37:34 (109328): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:24,216 | INFO     | [job] create_data_payload thread has finished
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:24,330 | INFO     | [payload] validate_post thread has finished
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:26,825 | INFO     | [data] queue_monitor thread has finished
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:28,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139879701129024)>', '<ExcThread(monitor, started 139878805260032)>']
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:28,044 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:28,044 | INFO     | [monitor] control thread has ended
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:33,111 | INFO     | all workflow threads have been joined
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:33,111 | INFO     | end of generic workflow (traces error code: 0)
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:33,111 | INFO     | traces error code: 0
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:33,111 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:33,181 [wrapper] ==== pilot stdout END ====
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:33,184 [wrapper] ==== wrapper stdout RESUME ====
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:33,187 [wrapper] pilotpid: 5891
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:33,189 [wrapper] Pilot exit status: 0
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:33,269 [wrapper] pandaids: 6582470755
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:33,285 [wrapper] cleanup supervisor_pilot 12432 5892
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:33,288 [wrapper] Test setup, not cleaning
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:33,290 [wrapper] apfmon messages muted
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:33,293 [wrapper] ==== wrapper stdout END ====
2025-04-02 07:37:34 (109328): Guest Log: 2025-04-02 04:46:33,295 [wrapper] ==== wrapper stderr END ====
2025-04-02 07:37:34 (109328): Guest Log:  *** Error codes and diagnostics ***
2025-04-02 07:37:34 (109328): Guest Log:     "exeErrorCode": 0,
2025-04-02 07:37:34 (109328): Guest Log:     "exeErrorDiag": "",
2025-04-02 07:37:34 (109328): Guest Log:     "pilotErrorCode": 0,
2025-04-02 07:37:34 (109328): Guest Log:     "pilotErrorDiag": "",
2025-04-02 07:37:34 (109328): Guest Log:  *** Listing of results directory ***
2025-04-02 07:37:34 (109328): Guest Log: total 315296
2025-04-02 07:37:34 (109328): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Apr  1 09:13 pilot3.tar.gz
2025-04-02 07:37:34 (109328): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  1 09:34 runpilot2-wrapper.sh
2025-04-02 07:37:34 (109328): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Apr  1 09:34 queuedata.json
2025-04-02 07:37:34 (109328): Guest Log: -rwxr-xr-x. 1 atlas atlas     12147 Apr  2 01:27 init_data.xml
2025-04-02 07:37:34 (109328): Guest Log: -rwxr-xr-x. 1 atlas atlas    507242 Apr  2 01:27 input.tar.gz
2025-04-02 07:37:34 (109328): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  2 01:27 start_atlas.sh
2025-04-02 07:37:34 (109328): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  2 01:27 EVNT.43634896._000270.pool.root.1 -> /data/./ATLAS.root_0
2025-04-02 07:37:34 (109328): Guest Log: -rw-r--r--. 1 atlas atlas      2596 Apr  2 01:27 pandaJob.out
2025-04-02 07:37:34 (109328): Guest Log: -rw-------. 1 atlas atlas       424 Apr  2 01:27 setup.sh.local
2025-04-02 07:37:34 (109328): Guest Log: -rw-------. 1 atlas atlas    989902 Apr  2 01:27 agis_schedconf.cvmfs.json
2025-04-02 07:37:34 (109328): Guest Log: drwx------. 4 atlas atlas      4096 Apr  2 01:27 pilot3
2025-04-02 07:37:34 (109328): Guest Log: -rw-------. 1 atlas atlas        95 Apr  2 04:45 pilot_heartbeat.json
2025-04-02 07:37:34 (109328): Guest Log: -rw-------. 1 atlas atlas 316351798 Apr  2 04:45 HITS.43634898._003084.pool.root.1
2025-04-02 07:37:34 (109328): Guest Log: -rw-------. 1 atlas atlas      1027 Apr  2 04:46 memory_monitor_summary.json
2025-04-02 07:37:34 (109328): Guest Log: -rw-------. 1 atlas atlas   1599134 Apr  2 04:46 agis_ddmendpoints.agis.ALL.json
2025-04-02 07:37:34 (109328): Guest Log: -rw-------. 1 atlas atlas    304473 Apr  2 04:46 log.43634898._003084.job.log.tgz.1
2025-04-02 07:37:34 (109328): Guest Log: -rw-------. 1 atlas atlas      7670 Apr  2 04:46 heartbeat.json
2025-04-02 07:37:34 (109328): Guest Log: -rw-------. 1 atlas atlas      4402 Apr  2 04:46 pilotlog.txt
2025-04-02 07:37:34 (109328): Guest Log: -rw-------. 1 atlas atlas   1066110 Apr  2 04:46 log.43634898._003084.job.log.1
2025-04-02 07:37:34 (109328): Guest Log: -rw-------. 1 atlas atlas       357 Apr  2 04:46 output.list
2025-04-02 07:37:34 (109328): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  2 04:46 runtime_log
2025-04-02 07:37:34 (109328): Guest Log: -rw-------. 1 atlas atlas   1392640 Apr  2 04:46 result.tar.gz
2025-04-02 07:37:34 (109328): Guest Log: -rw-r--r--. 1 atlas atlas     10942 Apr  2 04:46 runtime_log.err
2025-04-02 07:37:34 (109328): Guest Log: -rw-------. 1 atlas atlas       660 Apr  2 04:46 RSeLDmLCnJ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmeVDLDmSuXCXn.diag
2025-04-02 07:37:34 (109328): Guest Log: Looking for outputfile HITS.43634898._003084.pool.root.1
2025-04-02 07:37:34 (109328): Guest Log: HITS file was successfully produced
2025-04-02 07:37:34 (109328): Guest Log: -rw-------. 1 atlas atlas 316351798 Apr  2 04:45 /home/atlas/RunAtlas/HITS.43634898._003084.pool.root.1
2025-04-02 07:37:35 (109328): Guest Log: Successfully finished the ATLAS job!
2025-04-02 07:37:35 (109328): Guest Log: Copying the results back to the shared directory!
2025-04-02 07:37:35 (109328): Guest Log:  *** Contents of shared directory: ***
2025-04-02 07:37:35 (109328): Guest Log: total 662160
2025-04-02 07:37:35 (109328): Guest Log: -rwxrwxrwx. 1 root root 359761332 Apr  2 01:26 ATLAS.root_0
2025-04-02 07:37:35 (109328): Guest Log: -rwxrwxrwx. 1 root root 316351798 Apr  2 04:37 HITS.pool.root.1
2025-04-02 07:37:35 (109328): Guest Log: -rwxrwxrwx. 1 root root     12147 Apr  2 01:26 init_data.xml
2025-04-02 07:37:35 (109328): Guest Log: -rwxrwxrwx. 1 root root    507242 Apr  1 18:34 input.tar.gz
2025-04-02 07:37:35 (109328): Guest Log: -rwxrwxrwx. 1 root root   1392640 Apr  2 04:37 result.tar.gz
2025-04-02 07:37:35 (109328): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  1 18:34 start_atlas.sh
2025-04-02 07:37:35 (109328): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-02 07:37:35 (109328): VM Completion File Detected.
2025-04-02 07:37:35 (109328): Powering off VM.
2025-04-02 07:37:36 (109328): Successfully stopped VM.
2025-04-02 07:37:36 (109328): Deregistering VM. (boinc_44bfc8ed00db5e07, slot#3)
2025-04-02 07:37:36 (109328): Removing network bandwidth throttle group from VM.
2025-04-02 07:37:36 (109328): Removing VM from VirtualBox.
07:37:41 (109328): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN