Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-01 20:00:15 (3240): Detected: vboxwrapper 26206
2025-04-01 20:00:15 (3240): Detected: BOINC client v7.16.20
2025-04-01 20:00:16 (3240): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-04-01 20:00:16 (3240): Successfully copied 'init_data.xml' to the shared directory.
2025-04-01 20:00:16 (3240): Create VM. (boinc_cab374e8a560a6bd, slot#8)
2025-04-01 20:00:17 (3240): Setting Memory Size for VM. (4700MB)
2025-04-01 20:00:17 (3240): Setting CPU Count for VM. (7)
2025-04-01 20:00:17 (3240): Setting Chipset Options for VM.
2025-04-01 20:00:18 (3240): Setting Graphics Controller Options for VM.
2025-04-01 20:00:18 (3240): Setting Boot Options for VM.
2025-04-01 20:00:18 (3240): Setting Network Configuration for NAT.
2025-04-01 20:00:18 (3240): Enabling VM Network Access.
2025-04-01 20:00:19 (3240): Disabling USB Support for VM.
2025-04-01 20:00:19 (3240): Disabling COM Port Support for VM.
2025-04-01 20:00:19 (3240): Disabling LPT Port Support for VM.
2025-04-01 20:00:20 (3240): Disabling Audio Support for VM.
2025-04-01 20:00:20 (3240): Disabling Clipboard Support for VM.
2025-04-01 20:00:20 (3240): Disabling Drag and Drop Support for VM.
2025-04-01 20:00:20 (3240): Adding storage controller(s) to VM.
2025-04-01 20:00:21 (3240): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-01 20:00:21 (3240): Adding VirtualBox Guest Additions to VM.
2025-04-01 20:00:21 (3240): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-01 20:00:22 (3240): forwarding host port 50430 to guest port 80
2025-04-01 20:00:22 (3240): Enabling remote desktop for VM.
2025-04-01 20:00:22 (3240): Required extension pack not installed, remote desktop not enabled.
2025-04-01 20:00:22 (3240): Enabling shared directory for VM.
2025-04-01 20:00:23 (3240): Starting VM using VBoxManage interface. (boinc_cab374e8a560a6bd, slot#8)
2025-04-01 20:00:27 (3240): Successfully started VM. (PID = '9028')
2025-04-01 20:00:27 (3240): Reporting VM Process ID to BOINC.
2025-04-01 20:00:27 (3240): Guest Log: BIOS: VirtualBox 6.1.50
2025-04-01 20:00:27 (3240): Guest Log: CPUID EDX: 0x178bfbff
2025-04-01 20:00:27 (3240): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-01 20:00:27 (3240): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-01 20:00:27 (3240): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-01 20:00:27 (3240): Detected: Web Application Enabled (http://localhost:50430)
2025-04-01 20:00:27 (3240): Preference change detected
2025-04-01 20:00:27 (3240): Setting CPU throttle for VM. (100%)
2025-04-01 20:00:27 (3240): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-01 20:00:29 (3240): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-01 20:00:29 (3240): Guest Log: BIOS: Booting from Hard Disk...
2025-04-01 20:00:32 (3240): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-01 20:00:32 (3240): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-01 20:00:32 (3240): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-01 20:00:40 (3240): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-01 20:00:40 (3240): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-01 20:00:44 (3240): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-01 20:00:44 (3240): Guest Log: 00:00:00.000084 main     Log opened 2025-04-01T20:00:42.440143000Z
2025-04-01 20:00:44 (3240): Guest Log: 00:00:00.000146 main     OS Product: Linux
2025-04-01 20:00:44 (3240): Guest Log: 00:00:00.000164 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-01 20:00:44 (3240): Guest Log: 00:00:00.000179 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-01 20:00:44 (3240): Guest Log: 00:00:00.000250 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-01 20:00:44 (3240): Guest Log: 00:00:00.000251 main     Process ID: 1349
2025-04-01 20:00:44 (3240): Guest Log: 00:00:00.000251 main     Package type: LINUX_64BITS_GENERIC
2025-04-01 20:00:44 (3240): Guest Log: 00:00:00.000710 main     5.2.32 r132073 started. Verbose level = 0
2025-04-01 20:00:44 (3240): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-01 20:00:44 (3240): Guest Log: [INFO] Mounting shared directory
2025-04-01 20:00:44 (3240): Guest Log: [INFO] Checking for init_data.xml
2025-04-01 20:00:46 (3240): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-01 20:00:46 (3240): Guest Log: [INFO] Detected branch: prod
2025-04-01 20:00:46 (3240): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-01 20:00:46 (3240): Guest Log: Copying input files
2025-04-01 20:00:48 (3240): Guest Log: Copied input files into RunAtlas.
2025-04-01 20:00:48 (3240): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-01 20:00:48 (3240): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-01 20:00:48 (3240): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-01 20:00:48 (3240): Guest Log: Further information can be found at the LHC@home message board.
2025-04-01 20:00:54 (3240): Guest Log: 00:00:10.003258 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 989 255 000ns (GuestNow=1 743 530 452 452 517 000 ns GuestLast=1 743 537 642 441 772 000 ns fSetTimeLastLoop=true )
2025-04-01 20:00:55 (3240): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-01 20:00:55 (3240): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-01 20:00:55 (3240): Guest Log: 2.6.3.0 1626 0 30172 144376 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-01 20:00:56 (3240): Guest Log: copied the webapp to /var/www
2025-04-01 20:00:56 (3240): Guest Log: ATHENA_PROC_NUMBER=7
2025-04-01 20:00:56 (3240): Guest Log: ATHENA_CORE_NUMBER=7
2025-04-01 20:00:56 (3240): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-01 20:00:56 (3240): Guest Log:  *** Starting ATLAS job. (PandaID=6582420429 taskID=43634898) ***
2025-04-01 21:40:33 (3240): Status Report: Elapsed Time: '6000.000000'
2025-04-01 21:40:33 (3240): Status Report: CPU Time: '35741.437500'
2025-04-01 22:26:37 (3240): Guest Log:  *** Job finished ***
2025-04-01 22:26:37 (3240): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:18,977 | INFO     | [data] queue_monitor thread has finished
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:23,294 | INFO     | job.realtimelogging is not enabled
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:24,337 | INFO     | [payload] run_realtimelog thread has finished
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:25,325 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140708955010880)>', '<ExcThread(monitor, started 140708128208640)>']
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:25,799 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:25,799 | INFO     | [monitor] control thread has ended
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:30,332 | INFO     | all workflow threads have been joined
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:30,332 | INFO     | end of generic workflow (traces error code: 0)
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:30,332 | INFO     | traces error code: 0
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:30,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:30,527 [wrapper] ==== pilot stdout END ====
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:30,531 [wrapper] ==== wrapper stdout RESUME ====
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:30,535 [wrapper] pilotpid: 5987
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:30,538 [wrapper] Pilot exit status: 0
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:30,614 [wrapper] pandaids: 6582420429
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:30,636 [wrapper] cleanup supervisor_pilot  7285 5988
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:30,640 [wrapper] Test setup, not cleaning
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:30,644 [wrapper] apfmon messages muted
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:30,648 [wrapper] ==== wrapper stdout END ====
2025-04-01 22:26:37 (3240): Guest Log: 2025-04-01 20:26:30,651 [wrapper] ==== wrapper stderr END ====
2025-04-01 22:26:37 (3240): Guest Log:  *** Error codes and diagnostics ***
2025-04-01 22:26:37 (3240): Guest Log:     "exeErrorCode": 0,
2025-04-01 22:26:37 (3240): Guest Log:     "exeErrorDiag": "",
2025-04-01 22:26:37 (3240): Guest Log:     "pilotErrorCode": 0,
2025-04-01 22:26:37 (3240): Guest Log:     "pilotErrorDiag": "",
2025-04-01 22:26:37 (3240): Guest Log:  *** Listing of results directory ***
2025-04-01 22:26:37 (3240): Guest Log: total 318136
2025-04-01 22:26:37 (3240): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Apr  1 07:10 pilot3.tar.gz
2025-04-01 22:26:37 (3240): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Apr  1 07:12 queuedata.json
2025-04-01 22:26:37 (3240): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  1 07:12 runpilot2-wrapper.sh
2025-04-01 22:26:37 (3240): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  1 18:00 start_atlas.sh
2025-04-01 22:26:37 (3240): Guest Log: -rwxr-xr-x. 1 atlas atlas    507242 Apr  1 18:00 input.tar.gz
2025-04-01 22:26:37 (3240): Guest Log: -rwxr-xr-x. 1 atlas atlas      8817 Apr  1 18:00 init_data.xml
2025-04-01 22:26:37 (3240): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  1 18:00 EVNT.43634896._000011.pool.root.1 -> /data/./ATLAS.root_0
2025-04-01 22:26:37 (3240): Guest Log: -rw-r--r--. 1 atlas atlas      2593 Apr  1 18:00 pandaJob.out
2025-04-01 22:26:37 (3240): Guest Log: -rw-------. 1 atlas atlas       424 Apr  1 18:01 setup.sh.local
2025-04-01 22:26:37 (3240): Guest Log: -rw-------. 1 atlas atlas    989894 Apr  1 18:01 agis_schedconf.cvmfs.json
2025-04-01 22:26:37 (3240): Guest Log: -rw-------. 1 atlas atlas   1599134 Apr  1 18:01 agis_ddmendpoints.agis.ALL.json
2025-04-01 22:26:37 (3240): Guest Log: drwx------. 4 atlas atlas      4096 Apr  1 18:02 pilot3
2025-04-01 22:26:37 (3240): Guest Log: -rw-------. 1 atlas atlas        95 Apr  1 20:25 pilot_heartbeat.json
2025-04-01 22:26:37 (3240): Guest Log: -rw-------. 1 atlas atlas 319911490 Apr  1 20:25 HITS.43634898._000163.pool.root.1
2025-04-01 22:26:37 (3240): Guest Log: -rw-------. 1 atlas atlas      1026 Apr  1 20:25 memory_monitor_summary.json
2025-04-01 22:26:37 (3240): Guest Log: -rw-------. 1 atlas atlas    318722 Apr  1 20:26 log.43634898._000163.job.log.tgz.1
2025-04-01 22:26:37 (3240): Guest Log: -rw-------. 1 atlas atlas      7700 Apr  1 20:26 heartbeat.json
2025-04-01 22:26:37 (3240): Guest Log: -rw-------. 1 atlas atlas      4351 Apr  1 20:26 pilotlog.txt
2025-04-01 22:26:37 (3240): Guest Log: -rw-------. 1 atlas atlas    731124 Apr  1 20:26 log.43634898._000163.job.log.1
2025-04-01 22:26:37 (3240): Guest Log: -rw-------. 1 atlas atlas       357 Apr  1 20:26 output.list
2025-04-01 22:26:37 (3240): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  1 20:26 runtime_log
2025-04-01 22:26:37 (3240): Guest Log: -rw-------. 1 atlas atlas   1064960 Apr  1 20:26 result.tar.gz
2025-04-01 22:26:37 (3240): Guest Log: -rw-------. 1 atlas atlas       654 Apr  1 20:26 ymZKDmZykJ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmEjqKDmwDB0pn.diag
2025-04-01 22:26:37 (3240): Guest Log: -rw-r--r--. 1 atlas atlas     10936 Apr  1 20:26 runtime_log.err
2025-04-01 22:26:37 (3240): Guest Log: Looking for outputfile HITS.43634898._000163.pool.root.1
2025-04-01 22:26:37 (3240): Guest Log: HITS file was successfully produced
2025-04-01 22:26:37 (3240): Guest Log: -rw-------. 1 atlas atlas 319911490 Apr  1 20:25 /home/atlas/RunAtlas/HITS.43634898._000163.pool.root.1
2025-04-01 22:26:38 (3240): Guest Log: Successfully finished the ATLAS job!
2025-04-01 22:26:38 (3240): Guest Log: Copying the results back to the shared directory!
2025-04-01 22:26:38 (3240): Guest Log:  *** Contents of shared directory: ***
2025-04-01 22:26:39 (3240): Guest Log: total 669520
2025-04-01 22:26:39 (3240): Guest Log: -rwxrwxrwx. 1 root root 364067255 Apr  1 18:00 ATLAS.root_0
2025-04-01 22:26:39 (3240): Guest Log: -rwxrwxrwx. 1 root root 319911490 Apr  1  2025 HITS.pool.root.1
2025-04-01 22:26:39 (3240): Guest Log: -rwxrwxrwx. 1 root root      8817 Apr  1 18:00 init_data.xml
2025-04-01 22:26:39 (3240): Guest Log: -rwxrwxrwx. 1 root root    507242 Apr  1 17:58 input.tar.gz
2025-04-01 22:26:39 (3240): Guest Log: -rwxrwxrwx. 1 root root   1064960 Apr  1  2025 result.tar.gz
2025-04-01 22:26:39 (3240): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  1 17:58 start_atlas.sh
2025-04-01 22:26:39 (3240): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-01 22:26:39 (3240): VM Completion File Detected.
2025-04-01 22:26:39 (3240): Powering off VM.
2025-04-01 22:26:40 (3240): Successfully stopped VM.
2025-04-01 22:26:40 (3240): Deregistering VM. (boinc_cab374e8a560a6bd, slot#8)
2025-04-01 22:26:40 (3240): Removing network bandwidth throttle group from VM.
2025-04-01 22:26:40 (3240): Removing VM from VirtualBox.
22:26:46 (3240): called boinc_finish(0)

</stderr_txt>
]]>

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