Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:07:55 (1531755): wrapper (7.7.26015): starting
11:07:55 (1531755): wrapper: running run_atlas (--nthreads 2)
[2025-04-01 11:07:55] Arguments: --nthreads 2
[2025-04-01 11:07:55] Threads: 2
[2025-04-01 11:07:55] Checking for CVMFS
[2025-04-01 11:08:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-01 11:08:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-01 11:08:12] Running cvmfs_config stat atlas.cern.ch
[2025-04-01 11:08:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-01 11:08:14] 2.11.0.0 1531955 0 23872 144361 3 1 3293294 4194305 0 130560 0 0 0.000 1170 448 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-04-01 11:08:14] CVMFS is ok
[2025-04-01 11:08:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-01 11:08:14] Small home clusters do not require a local http proxy but it is suggested if
[2025-04-01 11:08:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-04-01 11:08:14] Further information can be found at the LHC@home message board.
[2025-04-01 11:08:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-01 11:08:14] Checking for apptainer binary...
[2025-04-01 11:08:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-01 11:08:14] Running /usr/bin/apptainer --version
[2025-04-01 11:08:17] apptainer version 1.2.2-1.el8
[2025-04-01 11:08:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-01 11:08:19] bottom
[2025-04-01 11:08:19] apptainer works
[2025-04-01 11:08:19] Set ATHENA_PROC_NUMBER=2
[2025-04-01 11:08:19] Set ATHENA_CORE_NUMBER=2
[2025-04-01 11:08:20] Starting ATLAS job with PandaID=6582422298
[2025-04-01 11:08:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-01 11:19:33]  *** The last 200 lines of the pilot log: ***
[2025-04-01 11:19:33] 2025-04-01 09:19:15,405 | INFO     | monitor loop #173: job 0:6582422298 is in state 'failed'
[2025-04-01 11:19:33] 2025-04-01 09:19:15,405 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-01 11:19:33] 2025-04-01 09:19:17,909 | INFO     | monitor loop #174: job 0:6582422298 is in state 'failed'
[2025-04-01 11:19:33] 2025-04-01 09:19:17,909 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-01 11:19:33] 2025-04-01 09:19:19,716 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-01 11:19:33] 2025-04-01 09:19:19,717 | WARNING  | file does not exist either: /var/lib/boinc/slots/2/PanDA_Pilot-6582422298/memory_monitor_output.txt
[2025-04-01 11:19:33] 2025-04-01 09:19:19,717 | INFO     | memory summary dictionary not yet available
[2025-04-01 11:19:33] 2025-04-01 09:19:19,718 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-01 11:19:33] 2025-04-01 09:19:19,718 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-01 11:19:33] 2025-04-01 09:19:19,720 | INFO     | ..............................
[2025-04-01 11:19:33] 2025-04-01 09:19:19,720 | INFO     | . Timing measurements:
[2025-04-01 11:19:33] 2025-04-01 09:19:19,720 | INFO     | . get job = 0 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,721 | INFO     | . initial setup = 4 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,721 | INFO     | . payload setup = 18 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,721 | INFO     | . stage-in = 0 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,721 | INFO     | . payload execution = 326 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,722 | INFO     | . stage-out = 1 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,722 | INFO     | . log creation = 0 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,722 | INFO     | ..............................
[2025-04-01 11:19:33] 2025-04-01 09:19:19,723 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-01 11:19:33] 2025-04-01 09:19:19,723 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/2/PanDA_Pilot-6582422298/pilotlog.txt
[2025-04-01 11:19:33] 2025-04-01 09:19:19,750 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-04-01 11:19:33] - Log from pilotlog.txt -
[2025-04-01 11:19:33] 2025-04-01 09:19:15,405 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-01 11:19:33] 2025-04-01 09:19:17,909 | INFO     | monitor loop #174: job 0:6582422298 is in state 'failed'
[2025-04-01 11:19:33] 2025-04-01 09:19:17,909 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-01 11:19:33] 2025-04-01 09:19:19,716 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-01 11:19:33] 2025-04-01 09:19:19,717 | WARNING  | file does not exist either: /var/lib/boinc/slots/2/PanDA_Pilot-6582422298/memory_monitor_output.txt
[2025-04-01 11:19:33] 2025-04-01 09:19:19,717 | INFO     | memory summary dictionary not yet available
[2025-04-01 11:19:33] 2025-04-01 09:19:19,718 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-01 11:19:33] 2025-04-01 09:19:19,718 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-01 11:19:33] 2025-04-01 09:19:19,720 | INFO     | ..............................
[2025-04-01 11:19:33] 2025-04-01 09:19:19,720 | INFO     | . Timing measurements:
[2025-04-01 11:19:33] 2025-04-01 09:19:19,720 | INFO     | . get job = 0 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,721 | INFO     | . initial setup = 4 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,721 | INFO     | . payload setup = 18 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,721 | INFO     | . stage-in = 0 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,721 | INFO     | . payload execution = 326 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,722 | INFO     | . stage-out = 1 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,722 | INFO     | . log creation = 0 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,722 | INFO     | ..............................
[2025-04-01 11:19:33] 2025-04-01 09:19:19,723 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-01 11:19:33] 2025-04-01 09:19:19,723 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/2/PanDA_Pilot-6582422298/pilotlog.txt
[2025-04-01 11:19:33] 2025-04-01 09:19:19,751 | WARNING  | 
[2025-04-01 11:19:33] [begin log extracts]
[2025-04-01 11:19:33] - Log from pilotlog.txt -
[2025-04-01 11:19:33] 2025-04-01 09:19:15,405 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-01 11:19:33] 2025-04-01 09:19:17,909 | INFO     | monitor loop #174: job 0:6582422298 is in state 'failed'
[2025-04-01 11:19:33] 2025-04-01 09:19:17,909 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-04-01 11:19:33] 2025-04-01 09:19:19,716 | INFO     | CPU arch script returned: x86-64-v1
[2025-04-01 11:19:33] 2025-04-01 09:19:19,717 | WARNING  | file does not exist either: /var/lib/boinc/slots/2/PanDA_Pilot-6582422298/memory_monitor_output.txt
[2025-04-01 11:19:33] 2025-04-01 09:19:19,717 | INFO     | memory summary dictionary not yet available
[2025-04-01 11:19:33] 2025-04-01 09:19:19,718 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-01 11:19:33] 2025-04-01 09:19:19,718 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-01 11:19:33] 2025-04-01 09:19:19,720 | INFO     | ..............................
[2025-04-01 11:19:33] 2025-04-01 09:19:19,720 | INFO     | . Timing measurements:
[2025-04-01 11:19:33] 2025-04-01 09:19:19,720 | INFO     | . get job = 0 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,721 | INFO     | . initial setup = 4 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,721 | INFO     | . payload setup = 18 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,721 | INFO     | . stage-in = 0 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,721 | INFO     | . payload execution = 326 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,722 | INFO     | . stage-out = 1 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,722 | INFO     | . log creation = 0 s
[2025-04-01 11:19:33] 2025-04-01 09:19:19,722 | INFO     | ..............................
[2025-04-01 11:19:33] 2025-04-01 09:19:19,723 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-04-01 11:19:33] 2025-04-01 09:19:19,723 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/2/PanDA_Pilot-6582422298/pilotlog.txt
[2025-04-01 11:19:33] [end log extracts]
[2025-04-01 11:19:33] 2025-04-01 09:19:19,752 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-04-01 11:19:33] 2025-04-01 09:19:19,756 | WARNING  | pilotErrorDiags = ["Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-04-01 11:19:33] 2025-04-01 09:19:19,997 | INFO     | 
[2025-04-01 11:19:33] 2025-04-01 09:19:19,998 | INFO     | job summary report
[2025-04-01 11:19:33] 2025-04-01 09:19:19,998 | INFO     | --------------------------------------------------
[2025-04-01 11:19:33] 2025-04-01 09:19:19,998 | INFO     | PanDA job id: 6582422298
[2025-04-01 11:19:33] 2025-04-01 09:19:19,998 | INFO     | task id: 43634898
[2025-04-01 11:19:33] 2025-04-01 09:19:19,999 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-04-01 11:15:33,828 CRITICAL Transform executor raised TransformValidationExceptio
[2025-04-01 11:19:33] 2025-04-01 09:19:19,999 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-01 11:19:33] 2025-04-01 09:19:19,999 | INFO     | pilot state: failed 
[2025-04-01 11:19:33] 2025-04-01 09:19:20,000 | INFO     | transexitcode: 65
[2025-04-01 11:19:33] 2025-04-01 09:19:20,000 | INFO     | exeerrorcode: 65
[2025-04-01 11:19:33] 2025-04-01 09:19:20,000 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 6589.54 KB/s
[2025-04-01 11:19:33] 2025-04-01 09:19:20,000 | INFO     | exitcode: 65
[2025-04-01 11:19:33] 2025-04-01 09:19:20,001 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 6589.54 KB/s
[2025-04-01 11:19:33] 2025-04-01 09:19:20,001 | INFO     | cpuconsumptiontime: 273 s
[2025-04-01 11:19:33] 2025-04-01 09:19:20,001 | INFO     | nevents: 0
[2025-04-01 11:19:33] 2025-04-01 09:19:20,001 | INFO     | neventsw: 0
[2025-04-01 11:19:33] 2025-04-01 09:19:20,002 | INFO     | pid: 1542215
[2025-04-01 11:19:33] 2025-04-01 09:19:20,002 | INFO     | pgrp: 1542215
[2025-04-01 11:19:33] 2025-04-01 09:19:20,002 | INFO     | corecount: 2
[2025-04-01 11:19:33] 2025-04-01 09:19:20,002 | INFO     | event service: False
[2025-04-01 11:19:33] 2025-04-01 09:19:20,003 | INFO     | sizes: {0: 2410868, 1: 2410896, 2: 2411067, 11: 2411301, 12: 2411329, 426: 2435324, 427: 2435456, 429: 2439750, 431: 2439806, 566: 2439976}
[2025-04-01 11:19:33] 2025-04-01 09:19:20,003 | INFO     | --------------------------------------------------
[2025-04-01 11:19:33] 2025-04-01 09:19:20,003 | INFO     | 
[2025-04-01 11:19:33] 2025-04-01 09:19:20,004 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-04-01 11:19:33] 2025-04-01 09:19:20,043 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,044 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,044 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,044 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,045 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,045 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,045 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,045 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,046 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,046 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,046 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,047 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,047 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,047 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,048 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,048 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,048 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,049 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-01 11:19:33] 2025-04-01 09:19:20,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,049 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-01 11:19:33] 2025-04-01 09:19:20,050 | INFO     | job 6582422298 has completed (purged errors)
[2025-04-01 11:19:33] 2025-04-01 09:19:20,050 | INFO     | overall cleanup function is called
[2025-04-01 11:19:33] 2025-04-01 09:19:21,059 | INFO     | --- collectZombieJob: --- 10, [1542215]
[2025-04-01 11:19:33] 2025-04-01 09:19:21,060 | INFO     | zombie collector waiting for pid 1542215
[2025-04-01 11:19:33] 2025-04-01 09:19:21,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-01 11:19:33] 2025-04-01 09:19:21,060 | INFO     | collected zombie processes
[2025-04-01 11:19:33] 2025-04-01 09:19:21,060 | INFO     | will attempt to kill all subprocesses of pid=1542215
[2025-04-01 11:19:33] 2025-04-01 09:19:21,163 | INFO     | process IDs to be killed: [1542215] (in reverse order)
[2025-04-01 11:19:33] 2025-04-01 09:19:21,243 | WARNING  | found no corresponding commands to process id(s)
[2025-04-01 11:19:33] 2025-04-01 09:19:21,244 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-01 11:19:33] 2025-04-01 09:19:21,250 | INFO     | did not find any defunct processes belonging to 1542215
[2025-04-01 11:19:33] 2025-04-01 09:19:21,256 | INFO     | did not find any defunct processes belonging to 1542215
[2025-04-01 11:19:33] 2025-04-01 09:19:21,257 | INFO     | ready for new job
[2025-04-01 11:19:33] 2025-04-01 09:19:21,257 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-01 11:19:33] 2025-04-01 09:19:21,260 | INFO     | ***************************************
[2025-04-01 11:19:33] 2025-04-01 09:19:21,260 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-01 11:19:33] 2025-04-01 09:19:21,261 | INFO     | ***************************************
[2025-04-01 11:19:33] 2025-04-01 09:19:21,261 | INFO     | 
[2025-04-01 11:19:33] 2025-04-01 09:19:21,273 | INFO     | architecture information:
[2025-04-01 11:19:33] 2025-04-01 09:19:21,274 | INFO     | executing command: cat /etc/os-release
[2025-04-01 11:19:33] 2025-04-01 09:19:21,344 | INFO     | cat /etc/os-release:
[2025-04-01 11:19:33] NAME="CentOS Linux"
[2025-04-01 11:19:33] VERSION="7 (Core)"
[2025-04-01 11:19:33] ID="centos"
[2025-04-01 11:19:33] ID_LIKE="rhel fedora"
[2025-04-01 11:19:33] VERSION_ID="7"
[2025-04-01 11:19:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-01 11:19:33] ANSI_COLOR="0;31"
[2025-04-01 11:19:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-01 11:19:33] HOME_URL="https://www.centos.org/"
[2025-04-01 11:19:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-01 11:19:33] 
[2025-04-01 11:19:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-01 11:19:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-01 11:19:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-01 11:19:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-01 11:19:33] 
[2025-04-01 11:19:33] 2025-04-01 09:19:21,345 | INFO     | ***************************************
[2025-04-01 11:19:33] 2025-04-01 09:19:21,848 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-04-01 11:19:33] 2025-04-01 09:19:21,923 | INFO     | sufficient remaining disk space (209565253632 B)
[2025-04-01 11:19:33] 2025-04-01 09:19:21,924 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-01 11:19:33] 2025-04-01 09:19:21,924 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-01 11:19:33] 2025-04-01 09:19:21,925 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-01 11:19:33] 2025-04-01 09:19:21,926 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-01 11:19:33] 2025-04-01 09:19:21,926 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-01 11:19:33] 2025-04-01 09:19:21,927 | INFO     | found 0 job(s) in 20 queues
[2025-04-01 11:19:33] 2025-04-01 09:19:21,927 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-01 11:19:33] 2025-04-01 09:19:21,927 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-01 11:19:33] 2025-04-01 09:19:21,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-01 11:19:33] 2025-04-01 09:19:21,928 | INFO     | aborting loop
[2025-04-01 11:19:33] 2025-04-01 09:19:22,138 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-01 11:19:33] 2025-04-01 09:19:22,257 | INFO     | all data control threads have been joined
[2025-04-01 11:19:33] 2025-04-01 09:19:22,929 | INFO     | [job] queue monitor thread has finished
[2025-04-01 11:19:33] 2025-04-01 09:19:22,930 | INFO     | all job control threads have been joined
[2025-04-01 11:19:33] 2025-04-01 09:19:22,930 | INFO     | [job] retrieve thread has finished
[2025-04-01 11:19:33] 2025-04-01 09:19:22,933 | INFO     | [job] job monitor thread has finished
[2025-04-01 11:19:33] 2025-04-01 09:19:23,013 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-01 11:19:33] 2025-04-01 09:19:23,185 | INFO     | [payload] failed_post thread has finished
[2025-04-01 11:19:33] 2025-04-01 09:19:23,189 | INFO     | all payload control threads have been joined
[2025-04-01 11:19:33] 2025-04-01 09:19:23,263 | INFO     | [data] control thread has finished
[2025-04-01 11:19:33] 2025-04-01 09:19:23,781 | INFO     | [payload] validate_post thread has finished
[2025-04-01 11:19:33] 2025-04-01 09:19:23,932 | INFO     | [data] copytool_out thread has finished
[2025-04-01 11:19:33] 2025-04-01 09:19:23,936 | INFO     | [job] control thread has finished
[2025-04-01 11:19:33] 2025-04-01 09:19:23,968 | INFO     | [payload] validate_pre thread has finished
[2025-04-01 11:19:33] 2025-04-01 09:19:23,969 | INFO     | [payload] execute_payloads thread has finished
[2025-04-01 11:19:33] 2025-04-01 09:19:24,008 | INFO     | [job] validate thread has finished
[2025-04-01 11:19:33] 2025-04-01 09:19:24,160 | INFO     | [data] copytool_in thread has finished
[2025-04-01 11:19:33] 2025-04-01 09:19:24,164 | INFO     | [job] create_data_payload thread has finished
[2025-04-01 11:19:33] 2025-04-01 09:19:24,194 | INFO     | [payload] control thread has finished
[2025-04-01 11:19:33] 2025-04-01 09:19:26,144 | INFO     | [data] queue_monitor thread has finished
[2025-04-01 11:19:33] 2025-04-01 09:19:27,049 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518326069056)>', '<ExcThread(monitor, started 140517874579200)>']
[2025-04-01 11:19:33] 2025-04-01 09:19:27,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-01 11:19:33] 2025-04-01 09:19:27,956 | INFO     | [monitor] control thread has ended
[2025-04-01 11:19:33] 2025-04-01 09:19:32,058 | INFO     | all workflow threads have been joined
[2025-04-01 11:19:33] 2025-04-01 09:19:32,058 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-01 11:19:33] 2025-04-01 09:19:32,059 | INFO     | traces error code: 0
[2025-04-01 11:19:33] 2025-04-01 09:19:32,059 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-01 11:19:33] 2025-04-01 09:19:33,008 [wrapper] ==== pilot stdout END ====
[2025-04-01 11:19:33] 2025-04-01 09:19:33,015 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-01 11:19:33] 2025-04-01 09:19:33,020 [wrapper] pilotpid: 1535869
[2025-04-01 11:19:33] 2025-04-01 09:19:33,026 [wrapper] Pilot exit status: 0
[2025-04-01 11:19:33] 2025-04-01 09:19:33,115 [wrapper] pandaids: 6582422298
[2025-04-01 11:19:33] 2025-04-01 09:19:33,162 [wrapper] cleanup supervisor_pilot 1535875 1535870
[2025-04-01 11:19:33] 2025-04-01 09:19:33,169 [wrapper] Test setup, not cleaning
[2025-04-01 11:19:33] 2025-04-01 09:19:33,175 [wrapper] apfmon messages muted
[2025-04-01 11:19:33] 2025-04-01 09:19:33,180 [wrapper] ==== wrapper stdout END ====
[2025-04-01 11:19:33] 2025-04-01 09:19:33,186 [wrapper] ==== wrapper stderr END ====
[2025-04-01 11:19:33]  *** Error codes and diagnostics ***
[2025-04-01 11:19:33]     "exeErrorCode": 65,
[2025-04-01 11:19:33]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 6589.54 KB/s",
[2025-04-01 11:19:33]     "pilotErrorCode": 1305,
[2025-04-01 11:19:33]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132); Possible memory leak: 'pss' slope: 6589.54 KB/s",
[2025-04-01 11:19:33]  *** Listing of results directory ***
[2025-04-01 11:19:33] total 357244
[2025-04-01 11:19:33] -rw-r--r-- 1 boinc boinc    494584 Apr  1 09:10 pilot3.tar.gz
[2025-04-01 11:19:33] -rwx------ 1 boinc boinc     37140 Apr  1 09:13 runpilot2-wrapper.sh
[2025-04-01 11:19:33] -rw-r--r-- 1 boinc boinc      5112 Apr  1 09:14 queuedata.json
[2025-04-01 11:19:33] -rw-r--r-- 1 boinc boinc       100 Apr  1 11:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-01 11:19:33] -rwxr-xr-x 1 boinc boinc      7986 Apr  1 11:07 run_atlas
[2025-04-01 11:19:33] -rw-r--r-- 1 boinc boinc       105 Apr  1 11:07 job.xml
[2025-04-01 11:19:33] -rw-r--r-- 2 boinc boinc 361524935 Apr  1 11:07 EVNT.43634896._000039.pool.root.1
[2025-04-01 11:19:33] -rw-r--r-- 1 boinc boinc      6037 Apr  1 11:07 init_data.xml
[2025-04-01 11:19:33] -rw-r--r-- 2 boinc boinc     17571 Apr  1 11:07 start_atlas.sh
[2025-04-01 11:19:33] drwxrwx--x 2 boinc boinc        68 Apr  1 11:07 shared
[2025-04-01 11:19:33] -rw-r--r-- 2 boinc boinc    507247 Apr  1 11:07 input.tar.gz
[2025-04-01 11:19:33] -rw-r--r-- 1 boinc boinc         0 Apr  1 11:07 boinc_lockfile
[2025-04-01 11:19:33] -rw-r--r-- 1 boinc boinc      2594 Apr  1 11:08 pandaJob.out
[2025-04-01 11:19:33] -rw------- 1 boinc boinc       424 Apr  1 11:08 setup.sh.local
[2025-04-01 11:19:33] -rw------- 1 boinc boinc    987837 Apr  1 11:09 agis_schedconf.cvmfs.json
[2025-04-01 11:19:33] -rw------- 1 boinc boinc   1599134 Apr  1 11:09 agis_ddmendpoints.agis.ALL.json
[2025-04-01 11:19:33] drwx------ 4 boinc boinc       334 Apr  1 11:09 pilot3
[2025-04-01 11:19:33] -rw-r--r-- 1 boinc boinc       525 Apr  1 11:15 boinc_task_state.xml
[2025-04-01 11:19:33] -rw------- 1 boinc boinc     49966 Apr  1 11:17 log.43634898._000869.job.log.tgz.1
[2025-04-01 11:19:33] -rw------- 1 boinc boinc        95 Apr  1 11:18 pilot_heartbeat.json
[2025-04-01 11:19:33] -rw------- 1 boinc boinc      8250 Apr  1 11:19 heartbeat.json
[2025-04-01 11:19:33] -rw-r--r-- 1 boinc boinc      8192 Apr  1 11:19 boinc_mmap_file
[2025-04-01 11:19:33] -rw-r--r-- 1 boinc boinc        24 Apr  1 11:19 wrapper_checkpoint.txt
[2025-04-01 11:19:33] -rw------- 1 boinc boinc      4343 Apr  1 11:19 pilotlog.txt
[2025-04-01 11:19:33] -rw------- 1 boinc boinc    189752 Apr  1 11:19 log.43634898._000869.job.log.1
[2025-04-01 11:19:33] -rw------- 1 boinc boinc       188 Apr  1 11:19 output.list
[2025-04-01 11:19:33] -rw-r--r-- 1 boinc boinc       620 Apr  1 11:19 runtime_log
[2025-04-01 11:19:33] -rw------- 1 boinc boinc    256000 Apr  1 11:19 result.tar.gz
[2025-04-01 11:19:33] -rw------- 1 boinc boinc       640 Apr  1 11:19 W7jKDmizkJ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmboqKDmcDN3Xo.diag
[2025-04-01 11:19:33] -rw-r--r-- 1 boinc boinc     10816 Apr  1 11:19 runtime_log.err
[2025-04-01 11:19:33] -rw-r--r-- 1 boinc boinc     22145 Apr  1 11:19 stderr.txt
[2025-04-01 11:19:33] No HITS result produced
[2025-04-01 11:19:33]  *** Contents of shared directory: ***
[2025-04-01 11:19:33] total 353820
[2025-04-01 11:19:33] -rw-r--r-- 2 boinc boinc 361524935 Apr  1 11:07 ATLAS.root_0
[2025-04-01 11:19:33] -rw-r--r-- 2 boinc boinc     17571 Apr  1 11:07 start_atlas.sh
[2025-04-01 11:19:33] -rw-r--r-- 2 boinc boinc    507247 Apr  1 11:07 input.tar.gz
[2025-04-01 11:19:33] -rw------- 1 boinc boinc    256000 Apr  1 11:19 result.tar.gz
11:19:35 (1531755): run_atlas exited; CPU time 245.239911
11:19:35 (1531755): called boinc_finish(0)

</stderr_txt>
]]>

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