Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:38:16 (2124012): wrapper (7.7.26015): starting
02:38:16 (2124012): wrapper: running run_atlas (--nthreads 4)
[2025-04-02 02:38:16] Arguments: --nthreads 4
[2025-04-02 02:38:16] Threads: 4
[2025-04-02 02:38:16] Checking for CVMFS
[2025-04-02 02:38:16] No cvmfs_config command found, will try listing directly
[2025-04-02 02:38:16] CVMFS is ok
[2025-04-02 02:38:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-02 02:38:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-02 02:38:16] Further information can be found at the LHC@home message board.
[2025-04-02 02:38:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-02 02:38:16] Checking for apptainer binary...
[2025-04-02 02:38:16] which: no apptainer in ((null))
[2025-04-02 02:38:16] apptainer is not installed, using version from CVMFS
[2025-04-02 02:38:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-02 02:38:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2025-04-02 02:38:16] apptainer works
[2025-04-02 02:38:16] Set ATHENA_PROC_NUMBER=4
[2025-04-02 02:38:16] Set ATHENA_CORE_NUMBER=4
[2025-04-02 02:38:16] Starting ATLAS job with PandaID=6582364913
[2025-04-02 02:38:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-02 08:06:01]  *** The last 200 lines of the pilot log: ***
[2025-04-02 08:06:01] 2025-04-02 06:05:16,426 | INFO     | model: linear, x: [1743554329.0, 1743554390.0, 1743554451.0, 1743554512.0, 1743554573.0, 1743554634.0, 1743554695.0, 1743554756.0, 1743554817.0, 1743554878.0, 1743
[2025-04-02 08:06:01] 2025-04-02 06:05:16,427 | INFO     | sum of square deviations: 9784425315.0
[2025-04-02 08:06:01] 2025-04-02 06:05:16,428 | INFO     | sum of deviations: -24539265043.50001
[2025-04-02 08:06:01] 2025-04-02 06:05:16,428 | INFO     | mean x: 1743563936.5
[2025-04-02 08:06:01] 2025-04-02 06:05:16,428 | INFO     | mean y: 2456050.079113924
[2025-04-02 08:06:01] 2025-04-02 06:05:16,428 | INFO     | -- intersect: 4375301279.166718
[2025-04-02 08:06:01] 2025-04-02 06:05:16,429 | INFO     | intersect: 4375301279.166718
[2025-04-02 08:06:01] 2025-04-02 06:05:16,429 | INFO     | chi2: 4.180851751879725
[2025-04-02 08:06:01] 2025-04-02 06:05:16,429 | INFO     | current chi2=4.180851751879725 (change=-0.034382494322131835 %)
[2025-04-02 08:06:01] 2025-04-02 06:05:16,429 | INFO     | right removable region: 315
[2025-04-02 08:06:01] 2025-04-02 06:05:16,429 | INFO     | model: linear, x: [1743554634.0, 1743554695.0, 1743554756.0, 1743554817.0, 1743554878.0, 1743554939.0, 1743555000.0, 1743555061.0, 1743555122.0, 1743555183.0, 1743
[2025-04-02 08:06:01] 2025-04-02 06:05:16,429 | INFO     | sum of square deviations: 9784425315.0
[2025-04-02 08:06:01] 2025-04-02 06:05:16,431 | INFO     | sum of deviations: -98946239073.0
[2025-04-02 08:06:01] 2025-04-02 06:05:16,431 | INFO     | mean x: 1743564241.5
[2025-04-02 08:06:01] 2025-04-02 06:05:16,431 | INFO     | mean y: 2478657.9620253164
[2025-04-02 08:06:01] 2025-04-02 06:05:16,431 | INFO     | -- intersect: 17634492672.531967
[2025-04-02 08:06:01] 2025-04-02 06:05:16,431 | INFO     | intersect: 17634492672.531967
[2025-04-02 08:06:01] 2025-04-02 06:05:16,432 | INFO     | chi2: 1.8913277113990643
[2025-04-02 08:06:01] 2025-04-02 06:05:16,432 | INFO     | current chi2=1.8913277113990643 (change=54.74658970647764 %)
[2025-04-02 08:06:01] 2025-04-02 06:05:16,432 | INFO     | model: linear, x: [1743554939.0, 1743555000.0, 1743555061.0, 1743555122.0, 1743555183.0, 1743555244.0, 1743555305.0, 1743555366.0, 1743555427.0, 1743555488.0, 1743
[2025-04-02 08:06:01] 2025-04-02 06:05:16,432 | INFO     | sum of square deviations: 9327281860.0
[2025-04-02 08:06:01] 2025-04-02 06:05:16,434 | INFO     | sum of deviations: -148591477764.99997
[2025-04-02 08:06:01] 2025-04-02 06:05:16,434 | INFO     | mean x: 1743564394.0
[2025-04-02 08:06:01] 2025-04-02 06:05:16,434 | INFO     | mean y: 2495218.8392282957
[2025-04-02 08:06:01] 2025-04-02 06:05:16,434 | INFO     | -- intersect: 27778948613.47232
[2025-04-02 08:06:01] 2025-04-02 06:05:16,434 | INFO     | intersect: 27778948613.47232
[2025-04-02 08:06:01] 2025-04-02 06:05:16,434 | INFO     | chi2: 0.8401405195552583
[2025-04-02 08:06:01] 2025-04-02 06:05:16,434 | INFO     | current chi2=0.8401405195552583 (change=55.57932586237081 %)
[2025-04-02 08:06:01] 2025-04-02 06:05:16,435 | INFO     | model: linear, x: [1743555244.0, 1743555305.0, 1743555366.0, 1743555427.0, 1743555488.0, 1743555549.0, 1743555610.0, 1743555671.0, 1743555732.0, 1743555793.0, 1743
[2025-04-02 08:06:01] 2025-04-02 06:05:16,435 | INFO     | sum of square deviations: 8884603792.5
[2025-04-02 08:06:01] 2025-04-02 06:05:16,437 | INFO     | sum of deviations: -164694620654.00027
[2025-04-02 08:06:01] 2025-04-02 06:05:16,437 | INFO     | mean x: 1743564546.5
[2025-04-02 08:06:01] 2025-04-02 06:05:16,437 | INFO     | mean y: 2500734.5359477126
[2025-04-02 08:06:01] 2025-04-02 06:05:16,437 | INFO     | -- intersect: 32323098059.763435
[2025-04-02 08:06:01] 2025-04-02 06:05:16,437 | INFO     | intersect: 32323098059.763435
[2025-04-02 08:06:01] 2025-04-02 06:05:16,437 | INFO     | chi2: 0.6186890632276767
[2025-04-02 08:06:01] 2025-04-02 06:05:16,437 | INFO     | current chi2=0.6186890632276767 (change=26.35885916379922 %)
[2025-04-02 08:06:01] 2025-04-02 06:05:16,437 | INFO     | model: linear, x: [1743555549.0, 1743555610.0, 1743555671.0, 1743555732.0, 1743555793.0, 1743555854.0, 1743555915.0, 1743555976.0, 1743556037.0, 1743556098.0, 1743
[2025-04-02 08:06:01] 2025-04-02 06:05:16,438 | INFO     | sum of square deviations: 8456158550.0
[2025-04-02 08:06:01] 2025-04-02 06:05:16,439 | INFO     | sum of deviations: -156562691316.99994
[2025-04-02 08:06:01] 2025-04-02 06:05:16,439 | INFO     | mean x: 1743564699.0
[2025-04-02 08:06:01] 2025-04-02 06:05:16,439 | INFO     | mean y: 2497821.8704318935
[2025-04-02 08:06:01] 2025-04-02 06:05:16,439 | INFO     | -- intersect: 32283962289.061024
[2025-04-02 08:06:01] 2025-04-02 06:05:16,439 | INFO     | intersect: 32283962289.061024
[2025-04-02 08:06:01] 2025-04-02 06:05:16,440 | INFO     | chi2: 0.6065441004389089
[2025-04-02 08:06:01] 2025-04-02 06:05:16,440 | INFO     | current chi2=0.6065441004389089 (change=1.9630155938765037 %)
[2025-04-02 08:06:01] 2025-04-02 06:05:16,440 | INFO     | left removable region: 40
[2025-04-02 08:06:01] 2025-04-02 06:05:16,440 | INFO     | model: linear, x: [1743556769.0, 1743556830.0, 1743556891.0, 1743556952.0, 1743557013.0, 1743557074.0, 1743557135.0, 1743557196.0, 1743557257.0, 1743557318.0, 1743
[2025-04-02 08:06:01] 2025-04-02 06:05:16,440 | INFO     | sum of square deviations: 6448679050.0
[2025-04-02 08:06:01] 2025-04-02 06:05:16,441 | INFO     | sum of deviations: -94601819195.00002
[2025-04-02 08:06:01] 2025-04-02 06:05:16,442 | INFO     | mean x: 1743565126.0
[2025-04-02 08:06:01] 2025-04-02 06:05:16,442 | INFO     | mean y: 2476382.3563636364
[2025-04-02 08:06:01] 2025-04-02 06:05:16,442 | INFO     | -- intersect: 25580495000.690212
[2025-04-02 08:06:01] 2025-04-02 06:05:16,442 | INFO     | intersect: 25580495000.690212
[2025-04-02 08:06:01] 2025-04-02 06:05:16,442 | INFO     | chi2: 0.5082390310100001
[2025-04-02 08:06:01] 2025-04-02 06:05:16,442 | INFO     | -- intersect: 25580495000.690212
[2025-04-02 08:06:01] 2025-04-02 06:05:16,442 | INFO     | current memory leak: -14.67 B/s (using 275 data points, chi2=0.51)
[2025-04-02 08:06:01] 2025-04-02 06:05:16,443 | INFO     | ..............................
[2025-04-02 08:06:01] 2025-04-02 06:05:16,443 | INFO     | . Timing measurements:
[2025-04-02 08:06:01] 2025-04-02 06:05:16,443 | INFO     | . get job = 0 s
[2025-04-02 08:06:01] 2025-04-02 06:05:16,443 | INFO     | . initial setup = 1 s
[2025-04-02 08:06:01] 2025-04-02 06:05:16,443 | INFO     | . payload setup = 5 s
[2025-04-02 08:06:01] 2025-04-02 06:05:16,443 | INFO     | . stage-in = 0 s
[2025-04-02 08:06:01] 2025-04-02 06:05:16,443 | INFO     | . payload execution = 19581 s
[2025-04-02 08:06:01] 2025-04-02 06:05:16,443 | INFO     | . stage-out = 0 s
[2025-04-02 08:06:01] 2025-04-02 06:05:16,443 | INFO     | . log creation = 0 s
[2025-04-02 08:06:01] 2025-04-02 06:05:16,443 | INFO     | ..............................
[2025-04-02 08:06:01] 2025-04-02 06:05:16,569 | INFO     | 
[2025-04-02 08:06:01] 2025-04-02 06:05:16,570 | INFO     | job summary report
[2025-04-02 08:06:01] 2025-04-02 06:05:16,570 | INFO     | --------------------------------------------------
[2025-04-02 08:06:01] 2025-04-02 06:05:16,570 | INFO     | PanDA job id: 6582364913
[2025-04-02 08:06:01] 2025-04-02 06:05:16,570 | INFO     | task id: 43634898
[2025-04-02 08:06:01] 2025-04-02 06:05:16,570 | INFO     | errors: (none)
[2025-04-02 08:06:01] 2025-04-02 06:05:16,570 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-02 08:06:01] 2025-04-02 06:05:16,570 | INFO     | pilot state: finished 
[2025-04-02 08:06:01] 2025-04-02 06:05:16,570 | INFO     | transexitcode: 0
[2025-04-02 08:06:01] 2025-04-02 06:05:16,570 | INFO     | exeerrorcode: 0
[2025-04-02 08:06:01] 2025-04-02 06:05:16,570 | INFO     | exeerrordiag: 
[2025-04-02 08:06:01] 2025-04-02 06:05:16,570 | INFO     | exitcode: 0
[2025-04-02 08:06:01] 2025-04-02 06:05:16,570 | INFO     | exitmsg: OK
[2025-04-02 08:06:01] 2025-04-02 06:05:16,570 | INFO     | cpuconsumptiontime: 74540 s
[2025-04-02 08:06:01] 2025-04-02 06:05:16,570 | INFO     | nevents: 400
[2025-04-02 08:06:01] 2025-04-02 06:05:16,570 | INFO     | neventsw: 0
[2025-04-02 08:06:01] 2025-04-02 06:05:16,571 | INFO     | pid: 2134710
[2025-04-02 08:06:01] 2025-04-02 06:05:16,571 | INFO     | pgrp: 2134710
[2025-04-02 08:06:01] 2025-04-02 06:05:16,571 | INFO     | corecount: 4
[2025-04-02 08:06:01] 2025-04-02 06:05:16,571 | INFO     | event service: False
[2025-04-02 08:06:01] 2025-04-02 06:05:16,571 | INFO     | sizes: {0: 2410872, 1: 2411071, 5: 2411277, 11: 2411333, 19590: 2444369, 19591: 2444368, 19592: 2453571, 19596: 2453685}
[2025-04-02 08:06:01] 2025-04-02 06:05:16,571 | INFO     | --------------------------------------------------
[2025-04-02 08:06:01] 2025-04-02 06:05:16,571 | INFO     | 
[2025-04-02 08:06:01] 2025-04-02 06:05:16,571 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-04-02 08:06:01] 2025-04-02 06:05:16,583 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,583 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,583 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,583 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,584 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-02 08:06:01] 2025-04-02 06:05:16,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,584 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-02 08:06:01] 2025-04-02 06:05:16,585 | INFO     | job 6582364913 has completed (purged errors)
[2025-04-02 08:06:01] 2025-04-02 06:05:16,585 | INFO     | overall cleanup function is called
[2025-04-02 08:06:01] 2025-04-02 06:05:17,591 | INFO     | --- collectZombieJob: --- 10, [2134710]
[2025-04-02 08:06:01] 2025-04-02 06:05:17,591 | INFO     | zombie collector waiting for pid 2134710
[2025-04-02 08:06:01] 2025-04-02 06:05:17,591 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-02 08:06:01] 2025-04-02 06:05:17,591 | INFO     | collected zombie processes
[2025-04-02 08:06:01] 2025-04-02 06:05:17,591 | INFO     | will attempt to kill all subprocesses of pid=2134710
[2025-04-02 08:06:01] 2025-04-02 06:05:17,652 | INFO     | process IDs to be killed: [2134710] (in reverse order)
[2025-04-02 08:06:01] 2025-04-02 06:05:17,698 | WARNING  | found no corresponding commands to process id(s)
[2025-04-02 08:06:01] 2025-04-02 06:05:17,698 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-02 08:06:01] 2025-04-02 06:05:17,710 | INFO     | did not find any defunct processes belonging to 2134710
[2025-04-02 08:06:01] 2025-04-02 06:05:17,721 | INFO     | did not find any defunct processes belonging to 2134710
[2025-04-02 08:06:01] 2025-04-02 06:05:17,721 | INFO     | ready for new job
[2025-04-02 08:06:01] 2025-04-02 06:05:17,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-02 08:06:01] 2025-04-02 06:05:17,723 | INFO     | ***************************************
[2025-04-02 08:06:01] 2025-04-02 06:05:17,723 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-02 08:06:01] 2025-04-02 06:05:17,723 | INFO     | ***************************************
[2025-04-02 08:06:01] 2025-04-02 06:05:17,723 | INFO     | 
[2025-04-02 08:06:01] 2025-04-02 06:05:17,725 | INFO     | architecture information:
[2025-04-02 08:06:01] 2025-04-02 06:05:17,725 | INFO     | executing command: cat /etc/os-release
[2025-04-02 08:06:01] 2025-04-02 06:05:17,735 | INFO     | cat /etc/os-release:
[2025-04-02 08:06:01] NAME="CentOS Linux"
[2025-04-02 08:06:01] VERSION="7 (Core)"
[2025-04-02 08:06:01] ID="centos"
[2025-04-02 08:06:01] ID_LIKE="rhel fedora"
[2025-04-02 08:06:01] VERSION_ID="7"
[2025-04-02 08:06:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-02 08:06:01] ANSI_COLOR="0;31"
[2025-04-02 08:06:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-02 08:06:01] HOME_URL="https://www.centos.org/"
[2025-04-02 08:06:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-02 08:06:01] 
[2025-04-02 08:06:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-02 08:06:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-02 08:06:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-02 08:06:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-02 08:06:01] 
[2025-04-02 08:06:01] 2025-04-02 06:05:17,735 | INFO     | ***************************************
[2025-04-02 08:06:01] 2025-04-02 06:05:17,961 | INFO     | PID=2127629 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-02 08:06:01] 2025-04-02 06:05:17,962 | INFO     | .. there are 2 such processes running
[2025-04-02 08:06:01] 2025-04-02 06:05:18,238 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-04-02 08:06:01] 2025-04-02 06:05:18,247 | INFO     | sufficient remaining disk space (1666071920640 B)
[2025-04-02 08:06:01] 2025-04-02 06:05:18,248 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-02 08:06:01] 2025-04-02 06:05:18,248 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-02 08:06:01] 2025-04-02 06:05:18,248 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-02 08:06:01] 2025-04-02 06:05:18,248 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-02 08:06:01] 2025-04-02 06:05:18,248 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-02 08:06:01] 2025-04-02 06:05:18,249 | INFO     | aborting loop
[2025-04-02 08:06:01] 2025-04-02 06:05:18,249 | INFO     | found 0 job(s) in 20 queues
[2025-04-02 08:06:01] 2025-04-02 06:05:18,249 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-02 08:06:01] 2025-04-02 06:05:18,249 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-02 08:06:01] 2025-04-02 06:05:18,401 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-02 08:06:01] 2025-04-02 06:05:19,053 | INFO     | all data control threads have been joined
[2025-04-02 08:06:01] 2025-04-02 06:05:19,220 | INFO     | all payload control threads have been joined
[2025-04-02 08:06:01] 2025-04-02 06:05:19,253 | INFO     | [job] retrieve thread has finished
[2025-04-02 08:06:01] 2025-04-02 06:05:19,254 | INFO     | [job] queue monitor thread has finished
[2025-04-02 08:06:01] 2025-04-02 06:05:19,254 | INFO     | [job] job monitor thread has finished
[2025-04-02 08:06:01] 2025-04-02 06:05:19,373 | INFO     | [job] validate thread has finished
[2025-04-02 08:06:01] 2025-04-02 06:05:19,382 | INFO     | [data] copytool_in thread has finished
[2025-04-02 08:06:01] 2025-04-02 06:05:19,457 | INFO     | [job] create_data_payload thread has finished
[2025-04-02 08:06:01] 2025-04-02 06:05:19,694 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-02 08:06:01] 2025-04-02 06:05:19,727 | INFO     | [payload] validate_post thread has finished
[2025-04-02 08:06:01] 2025-04-02 06:05:19,821 | INFO     | [payload] validate_pre thread has finished
[2025-04-02 08:06:01] 2025-04-02 06:05:19,931 | INFO     | all job control threads have been joined
[2025-04-02 08:06:01] 2025-04-02 06:05:20,043 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-02 08:06:01] 2025-04-02 06:05:20,058 | INFO     | [data] control thread has finished
[2025-04-02 08:06:01] 2025-04-02 06:05:20,226 | INFO     | [payload] control thread has finished
[2025-04-02 08:06:01] 2025-04-02 06:05:20,285 | INFO     | [payload] execute_payloads thread has finished
[2025-04-02 08:06:01] 2025-04-02 06:05:20,807 | INFO     | [payload] failed_post thread has finished
[2025-04-02 08:06:01] 2025-04-02 06:05:20,937 | INFO     | [job] control thread has finished
[2025-04-02 08:06:01] 2025-04-02 06:05:21,699 | INFO     | [data] copytool_out thread has finished
[2025-04-02 08:06:01] 2025-04-02 06:05:22,407 | INFO     | [data] queue_monitor thread has finished
[2025-04-02 08:06:01] 2025-04-02 06:05:24,348 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22701738805056)>', '<ExcThread(monitor, started 22701502588672)>']
[2025-04-02 08:06:01] 2025-04-02 06:05:25,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-02 08:06:01] 2025-04-02 06:05:25,281 | INFO     | [monitor] control thread has ended
[2025-04-02 08:06:01] 2025-04-02 06:05:29,374 | INFO     | all workflow threads have been joined
[2025-04-02 08:06:01] 2025-04-02 06:05:29,374 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-02 08:06:01] 2025-04-02 06:05:29,374 | INFO     | traces error code: 0
[2025-04-02 08:06:01] 2025-04-02 06:05:29,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-02 08:06:01] 2025-04-02 06:05:29,456 [wrapper] ==== pilot stdout END ====
[2025-04-02 08:06:01] 2025-04-02 06:05:29,458 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-02 08:06:01] 2025-04-02 06:05:29,460 [wrapper] pilotpid: 2127629
[2025-04-02 08:06:01] 2025-04-02 06:05:29,462 [wrapper] Pilot exit status: 0
[2025-04-02 08:06:01] 2025-04-02 06:05:29,468 [wrapper] pandaids: 6582364913
[2025-04-02 08:06:01] 2025-04-02 06:05:29,496 [wrapper] cleanup supervisor_pilot 2400603 2127630
[2025-04-02 08:06:01] 2025-04-02 06:05:29,498 [wrapper] Test setup, not cleaning
[2025-04-02 08:06:01] 2025-04-02 06:05:29,500 [wrapper] apfmon messages muted
[2025-04-02 08:06:01] 2025-04-02 06:05:29,502 [wrapper] ==== wrapper stdout END ====
[2025-04-02 08:06:01] 2025-04-02 06:05:29,503 [wrapper] ==== wrapper stderr END ====
[2025-04-02 08:06:01]  *** Error codes and diagnostics ***
[2025-04-02 08:06:01]     "exeErrorCode": 0,
[2025-04-02 08:06:01]     "exeErrorDiag": "",
[2025-04-02 08:06:01]     "pilotErrorCode": 0,
[2025-04-02 08:06:01]     "pilotErrorDiag": "",
[2025-04-02 08:06:01]  *** Listing of results directory ***
[2025-04-02 08:06:01] total 666296
[2025-04-02 08:06:01] -rw-r--r-- 1 boinc boinc      5112 Apr  1 08:11 queuedata.json
[2025-04-02 08:06:01] -rw-r--r-- 1 boinc boinc    494584 Apr  1 08:11 pilot3.tar.gz
[2025-04-02 08:06:01] -rwx------ 1 boinc boinc     37140 Apr  1 08:11 runpilot2-wrapper.sh
[2025-04-02 08:06:01] -rw-r--r-- 1 boinc boinc       100 Apr  2 02:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-02 08:06:01] -rwxr-xr-x 1 boinc boinc      7986 Apr  2 02:38 run_atlas
[2025-04-02 08:06:01] -rw-r--r-- 1 boinc boinc       105 Apr  2 02:38 job.xml
[2025-04-02 08:06:01] -rw-r--r-- 2 boinc boinc 355876313 Apr  2 02:38 EVNT.43634896._000006.pool.root.1
[2025-04-02 08:06:01] -rw-r--r-- 1 boinc boinc      6421 Apr  2 02:38 init_data.xml
[2025-04-02 08:06:01] -rw-r--r-- 2 boinc boinc     17571 Apr  2 02:38 start_atlas.sh
[2025-04-02 08:06:01] drwxrwx--x 2 boinc boinc      4096 Apr  2 02:38 shared
[2025-04-02 08:06:01] -rw-r--r-- 2 boinc boinc    507242 Apr  2 02:38 input.tar.gz
[2025-04-02 08:06:01] -rw-r--r-- 1 boinc boinc         0 Apr  2 02:38 boinc_lockfile
[2025-04-02 08:06:01] -rw-r--r-- 1 boinc boinc      2590 Apr  2 02:38 pandaJob.out
[2025-04-02 08:06:01] -rw------- 1 boinc boinc       424 Apr  2 02:38 setup.sh.local
[2025-04-02 08:06:01] -rw------- 1 boinc boinc    989902 Apr  2 02:38 agis_schedconf.cvmfs.json
[2025-04-02 08:06:01] drwx------ 4 boinc boinc      4096 Apr  2 02:38 pilot3
[2025-04-02 08:06:01] -rw------- 1 boinc boinc 317637116 Apr  2 08:04 HITS.43634898._000030.pool.root.1
[2025-04-02 08:06:01] -rw-r--r-- 1 boinc boinc       530 Apr  2 08:04 boinc_task_state.xml
[2025-04-02 08:06:01] -rw------- 1 boinc boinc        95 Apr  2 08:04 pilot_heartbeat.json
[2025-04-02 08:06:01] -rw------- 1 boinc boinc      1038 Apr  2 08:05 memory_monitor_summary.json
[2025-04-02 08:06:01] -rw------- 1 boinc boinc   1599134 Apr  2 08:05 agis_ddmendpoints.agis.ALL.json
[2025-04-02 08:06:01] -rw------- 1 boinc boinc    397377 Apr  2 08:05 log.43634898._000030.job.log.tgz.1
[2025-04-02 08:06:01] -rw------- 1 boinc boinc      7726 Apr  2 08:05 heartbeat.json
[2025-04-02 08:06:01] -rw------- 1 boinc boinc      4747 Apr  2 08:05 pilotlog.txt
[2025-04-02 08:06:01] -rw------- 1 boinc boinc   2069999 Apr  2 08:05 log.43634898._000030.job.log.1
[2025-04-02 08:06:01] -rw------- 1 boinc boinc       357 Apr  2 08:05 output.list
[2025-04-02 08:06:01] -rw-r--r-- 1 boinc boinc       620 Apr  2 08:05 runtime_log
[2025-04-02 08:06:01] -rw------- 1 boinc boinc   2488320 Apr  2 08:05 result.tar.gz
[2025-04-02 08:06:01] -rw-r--r-- 1 boinc boinc     11425 Apr  2 08:05 runtime_log.err
[2025-04-02 08:06:01] -rw------- 1 boinc boinc       665 Apr  2 08:05 cXsLDmf1jJ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmRfqKDmHwJ0Xm.diag
[2025-04-02 08:06:01] -rw-r--r-- 1 boinc boinc        27 Apr  2 08:06 wrapper_checkpoint.txt
[2025-04-02 08:06:01] -rw-r--r-- 1 boinc boinc      8192 Apr  2 08:06 boinc_mmap_file
[2025-04-02 08:06:01] -rw-r--r-- 1 boinc boinc     21504 Apr  2 08:06 stderr.txt
[2025-04-02 08:06:01] HITS file was successfully produced:
[2025-04-02 08:06:01] -rw------- 1 boinc boinc 317637116 Apr  2 08:04 shared/HITS.pool.root.1
[2025-04-02 08:06:01]  *** Contents of shared directory: ***
[2025-04-02 08:06:01] total 660684
[2025-04-02 08:06:01] -rw-r--r-- 2 boinc boinc 355876313 Apr  2 02:38 ATLAS.root_0
[2025-04-02 08:06:01] -rw-r--r-- 2 boinc boinc     17571 Apr  2 02:38 start_atlas.sh
[2025-04-02 08:06:01] -rw-r--r-- 2 boinc boinc    507242 Apr  2 02:38 input.tar.gz
[2025-04-02 08:06:01] -rw------- 1 boinc boinc 317637116 Apr  2 08:04 HITS.pool.root.1
[2025-04-02 08:06:01] -rw------- 1 boinc boinc   2488320 Apr  2 08:05 result.tar.gz
08:06:03 (2124012): run_atlas exited; CPU time 74600.216277
08:06:03 (2124012): called boinc_finish(0)

</stderr_txt>
]]>

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