Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-03-31 23:20:56 (12152): Detected: vboxwrapper 26206
2025-03-31 23:20:56 (12152): Detected: BOINC client v8.0.4
2025-03-31 23:20:56 (12152): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-03-31 23:20:57 (12152): Successfully copied 'init_data.xml' to the shared directory.
2025-03-31 23:20:57 (12152): Create VM. (boinc_7e35c65a9006d987, slot#2)
2025-03-31 23:20:58 (12152): Setting Memory Size for VM. (4400MB)
2025-03-31 23:20:58 (12152): Setting CPU Count for VM. (4)
2025-03-31 23:20:58 (12152): Setting Chipset Options for VM.
2025-03-31 23:20:58 (12152): Setting Graphics Controller Options for VM.
2025-03-31 23:20:59 (12152): Setting Boot Options for VM.
2025-03-31 23:20:59 (12152): Setting Network Configuration for NAT.
2025-03-31 23:20:59 (12152): Enabling VM Network Access.
2025-03-31 23:20:59 (12152): Disabling USB Support for VM.
2025-03-31 23:21:00 (12152): Disabling COM Port Support for VM.
2025-03-31 23:21:00 (12152): Disabling LPT Port Support for VM.
2025-03-31 23:21:00 (12152): Disabling Audio Support for VM.
2025-03-31 23:21:00 (12152): Disabling Clipboard Support for VM.
2025-03-31 23:21:01 (12152): Disabling Drag and Drop Support for VM.
2025-03-31 23:21:01 (12152): Adding storage controller(s) to VM.
2025-03-31 23:21:01 (12152): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-03-31 23:21:02 (12152): Adding VirtualBox Guest Additions to VM.
2025-03-31 23:21:02 (12152): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-03-31 23:21:02 (12152): forwarding host port 51626 to guest port 80
2025-03-31 23:21:03 (12152): Enabling remote desktop for VM.
2025-03-31 23:21:03 (12152): Required extension pack not installed, remote desktop not enabled.
2025-03-31 23:21:03 (12152): Enabling shared directory for VM.
2025-03-31 23:21:04 (12152): Starting VM using VBoxManage interface. (boinc_7e35c65a9006d987, slot#2)
2025-03-31 23:21:11 (12152): Successfully started VM. (PID = '16192')
2025-03-31 23:21:11 (12152): Reporting VM Process ID to BOINC.
2025-03-31 23:21:11 (12152): Guest Log: BIOS: VirtualBox 7.1.6
2025-03-31 23:21:11 (12152): Guest Log: CPUID EDX: 0x178bfbff
2025-03-31 23:21:11 (12152): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-03-31 23:21:11 (12152): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-03-31 23:21:11 (12152): VM state change detected. (old = 'poweredoff', new = 'running')
2025-03-31 23:21:11 (12152): Detected: Web Application Enabled (http://localhost:51626)
2025-03-31 23:21:11 (12152): Preference change detected
2025-03-31 23:21:11 (12152): Setting CPU throttle for VM. (80%)
2025-03-31 23:21:13 (12152): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-03-31 23:21:13 (12152): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-03-31 23:21:13 (12152): Guest Log: BIOS: Booting from Hard Disk...
2025-03-31 23:21:21 (12152): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-03-31 23:21:21 (12152): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-03-31 23:21:21 (12152): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-03-31 23:21:25 (12152): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-03-31 23:21:25 (12152): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-03-31 23:21:31 (12152): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-03-31 23:21:31 (12152): Guest Log: 00:00:00.000169 main     Log opened 2025-03-31T23:21:29.180328000Z
2025-03-31 23:21:31 (12152): Guest Log: 00:00:00.000319 main     OS Product: Linux
2025-03-31 23:21:31 (12152): Guest Log: 00:00:00.000362 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-03-31 23:21:31 (12152): Guest Log: 00:00:00.000398 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-03-31 23:21:31 (12152): Guest Log: 00:00:00.000432 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-03-31 23:21:31 (12152): Guest Log: 00:00:00.000433 main     Process ID: 1311
2025-03-31 23:21:31 (12152): Guest Log: 00:00:00.000433 main     Package type: LINUX_64BITS_GENERIC
2025-03-31 23:21:31 (12152): Guest Log: 00:00:00.001687 main     5.2.32 r132073 started. Verbose level = 0
2025-03-31 23:21:31 (12152): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-03-31 23:21:31 (12152): Guest Log: [INFO] Mounting shared directory
2025-03-31 23:21:31 (12152): Guest Log: [INFO] Checking for init_data.xml
2025-03-31 23:21:39 (12152): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-03-31 23:21:39 (12152): Guest Log: [INFO] Detected branch: prod
2025-03-31 23:21:39 (12152): Guest Log: This is the prod version of the ATLAS job wrapper
2025-03-31 23:21:39 (12152): Guest Log: Copying input files
2025-03-31 23:21:41 (12152): Guest Log: 00:00:10.004743 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 411 481 778 000ns (GuestNow=1 743 477 700 665 322 000 ns GuestLast=1 743 463 289 183 544 000 ns fSetTimeLastLoop=true )
2025-03-31 23:21:50 (12152): Guest Log: Copied input files into RunAtlas.
2025-03-31 23:21:51 (12152): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-03-31 23:21:51 (12152): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-03-31 23:21:51 (12152): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-03-31 23:21:51 (12152): Guest Log: Further information can be found at the LHC@home message board.
2025-03-31 23:22:03 (12152): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-03-31 23:22:03 (12152): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-03-31 23:22:03 (12152): Guest Log: 2.6.3.0 1592 0 30180 144354 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-03-31 23:22:04 (12152): Guest Log: copied the webapp to /var/www
2025-03-31 23:22:04 (12152): Guest Log: ATHENA_PROC_NUMBER=4
2025-03-31 23:22:04 (12152): Guest Log: ATHENA_CORE_NUMBER=4
2025-03-31 23:22:04 (12152): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-03-31 23:22:04 (12152): Guest Log:  *** Starting ATLAS job. (PandaID=6581363842 taskID=43634882) ***
2025-04-01 01:01:16 (12152): Status Report: Elapsed Time: '6000.008165'
2025-04-01 01:01:16 (12152): Status Report: CPU Time: '17933.218750'
2025-04-01 02:41:21 (12152): Status Report: Elapsed Time: '12000.008165'
2025-04-01 02:41:21 (12152): Status Report: CPU Time: '39298.718750'
2025-04-01 04:21:26 (12152): Status Report: Elapsed Time: '18000.008165'
2025-04-01 04:21:26 (12152): Status Report: CPU Time: '60681.437500'
2025-04-01 04:24:33 (12152): Guest Log:  *** Job finished ***
2025-04-01 04:24:33 (12152): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:22,354 | INFO     | [payload] validate_pre thread has finished
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:25,996 | INFO     | [data] queue_monitor thread has finished
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:27,619 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140692222613312)>', '<ExcThread(monitor, started 140690898016000)>']
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:27,880 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:27,880 | INFO     | [monitor] control thread has ended
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:28,294 [wrapper] supervise_pilot (15 min periods counter: 21)
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:32,627 | INFO     | all workflow threads have been joined
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:32,627 | INFO     | end of generic workflow (traces error code: 0)
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:32,627 | INFO     | traces error code: 0
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:32,627 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:32,682 [wrapper] ==== pilot stdout END ====
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:32,686 [wrapper] ==== wrapper stdout RESUME ====
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:32,689 [wrapper] pilotpid: 5954
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:32,692 [wrapper] Pilot exit status: 0
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:32,749 [wrapper] pandaids: 6581363842
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:32,775 [wrapper] cleanup supervisor_pilot 24301 5955
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:32,780 [wrapper] Test setup, not cleaning
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:32,784 [wrapper] apfmon messages muted
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:32,787 [wrapper] ==== wrapper stdout END ====
2025-04-01 04:24:33 (12152): Guest Log: 2025-04-01 08:24:32,791 [wrapper] ==== wrapper stderr END ====
2025-04-01 04:24:33 (12152): Guest Log:  *** Error codes and diagnostics ***
2025-04-01 04:24:33 (12152): Guest Log:     "exeErrorCode": 0,
2025-04-01 04:24:33 (12152): Guest Log:     "exeErrorDiag": "",
2025-04-01 04:24:33 (12152): Guest Log:     "pilotErrorCode": 0,
2025-04-01 04:24:33 (12152): Guest Log:     "pilotErrorDiag": "",
2025-04-01 04:24:33 (12152): Guest Log:  *** Listing of results directory ***
2025-04-01 04:24:33 (12152): Guest Log: total 293520
2025-04-01 04:24:33 (12152): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Mar 31 22:42 pilot3.tar.gz
2025-04-01 04:24:33 (12152): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Mar 31 22:48 queuedata.json
2025-04-01 04:24:33 (12152): Guest Log: -rwx------. 1 atlas atlas     37140 Mar 31 22:48 runpilot2-wrapper.sh
2025-04-01 04:24:33 (12152): Guest Log: -rwxr-xr-x. 1 atlas atlas      9192 Apr  1 03:21 init_data.xml
2025-04-01 04:24:33 (12152): Guest Log: -rwxr-xr-x. 1 atlas atlas    507264 Apr  1 03:21 input.tar.gz
2025-04-01 04:24:33 (12152): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Apr  1 03:21 start_atlas.sh
2025-04-01 04:24:33 (12152): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr  1 03:21 EVNT.43634880._000965.pool.root.1 -> /data/./ATLAS.root_0
2025-04-01 04:24:33 (12152): Guest Log: -rw-r--r--. 1 atlas atlas      2619 Apr  1 03:22 pandaJob.out
2025-04-01 04:24:33 (12152): Guest Log: -rw-------. 1 atlas atlas       424 Apr  1 03:22 setup.sh.local
2025-04-01 04:24:33 (12152): Guest Log: -rw-------. 1 atlas atlas    987845 Apr  1 03:24 agis_schedconf.cvmfs.json
2025-04-01 04:24:33 (12152): Guest Log: drwx------. 4 atlas atlas      4096 Apr  1 03:24 pilot3
2025-04-01 04:24:33 (12152): Guest Log: -rw-------. 1 atlas atlas 293073285 Apr  1 08:22 HITS.43634882._012203.pool.root.1
2025-04-01 04:24:33 (12152): Guest Log: -rw-------. 1 atlas atlas      1035 Apr  1 08:23 memory_monitor_summary.json
2025-04-01 04:24:33 (12152): Guest Log: -rw-------. 1 atlas atlas   1599134 Apr  1 08:23 agis_ddmendpoints.agis.ALL.json
2025-04-01 04:24:33 (12152): Guest Log: -rw-------. 1 atlas atlas    362329 Apr  1 08:23 log.43634882._012203.job.log.tgz.1
2025-04-01 04:24:33 (12152): Guest Log: -rw-------. 1 atlas atlas        95 Apr  1 08:23 pilot_heartbeat.json
2025-04-01 04:24:33 (12152): Guest Log: -rw-------. 1 atlas atlas      7694 Apr  1 08:24 heartbeat.json
2025-04-01 04:24:33 (12152): Guest Log: -rw-------. 1 atlas atlas      4402 Apr  1 08:24 pilotlog.txt
2025-04-01 04:24:33 (12152): Guest Log: -rw-------. 1 atlas atlas   1498089 Apr  1 08:24 log.43634882._012203.job.log.1
2025-04-01 04:24:33 (12152): Guest Log: -rw-------. 1 atlas atlas       357 Apr  1 08:24 output.list
2025-04-01 04:24:33 (12152): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr  1 08:24 runtime_log
2025-04-01 04:24:33 (12152): Guest Log: -rw-------. 1 atlas atlas   1884160 Apr  1 08:24 result.tar.gz
2025-04-01 04:24:33 (12152): Guest Log: -rw-r--r--. 1 atlas atlas     10900 Apr  1 08:24 runtime_log.err
2025-04-01 04:24:33 (12152): Guest Log: -rw-------. 1 atlas atlas       647 Apr  1 08:24 6VxLDmK7cJ7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmIrCLDmmG10un.diag
2025-04-01 04:24:33 (12152): Guest Log: Looking for outputfile HITS.43634882._012203.pool.root.1
2025-04-01 04:24:33 (12152): Guest Log: HITS file was successfully produced
2025-04-01 04:24:33 (12152): Guest Log: -rw-------. 1 atlas atlas 293073285 Apr  1 08:22 /home/atlas/RunAtlas/HITS.43634882._012203.pool.root.1
2025-04-01 04:24:35 (12152): Guest Log: Successfully finished the ATLAS job!
2025-04-01 04:24:35 (12152): Guest Log: Copying the results back to the shared directory!
2025-04-01 04:24:35 (12152): Guest Log:  *** Contents of shared directory: ***
2025-04-01 04:24:35 (12152): Guest Log: total 622300
2025-04-01 04:24:35 (12152): Guest Log: -rwxrwxrwx. 1 root root 341731477 Apr  1 03:20 ATLAS.root_0
2025-04-01 04:24:35 (12152): Guest Log: -rwxrwxrwx. 1 root root 293073285 Apr  1 08:24 HITS.pool.root.1
2025-04-01 04:24:35 (12152): Guest Log: -rwxrwxrwx. 1 root root      9192 Apr  1 03:20 init_data.xml
2025-04-01 04:24:35 (12152): Guest Log: -rwxrwxrwx. 1 root root    507264 Apr  1 03:20 input.tar.gz
2025-04-01 04:24:35 (12152): Guest Log: -rwxrwxrwx. 1 root root   1884160 Apr  1  2025 result.tar.gz
2025-04-01 04:24:35 (12152): Guest Log: -rwxrwxrwx. 1 root root     17571 Apr  1 03:20 start_atlas.sh
2025-04-01 04:24:35 (12152): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-01 04:24:35 (12152): VM Completion File Detected.
2025-04-01 04:24:35 (12152): Powering off VM.
2025-04-01 04:24:36 (12152): Successfully stopped VM.
2025-04-01 04:24:36 (12152): Deregistering VM. (boinc_7e35c65a9006d987, slot#2)
2025-04-01 04:24:36 (12152): Removing network bandwidth throttle group from VM.
2025-04-01 04:24:36 (12152): Removing VM from VirtualBox.
04:24:42 (12152): called boinc_finish(0)

</stderr_txt>
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