Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:02:44 (2828144): wrapper (7.7.26015): starting
19:02:44 (2828144): wrapper: running run_atlas (--nthreads 4)
[2025-03-31 19:02:44] Arguments: --nthreads 4
[2025-03-31 19:02:44] Threads: 4
[2025-03-31 19:02:44] Checking for CVMFS
[2025-03-31 19:02:44] No cvmfs_config command found, will try listing directly
[2025-03-31 19:02:44] CVMFS is ok
[2025-03-31 19:02:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-03-31 19:02:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-03-31 19:02:44] Further information can be found at the LHC@home message board.
[2025-03-31 19:02:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-03-31 19:02:44] Checking for apptainer binary...
[2025-03-31 19:02:44] which: no apptainer in ((null))
[2025-03-31 19:02:44] apptainer is not installed, using version from CVMFS
[2025-03-31 19:02:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-03-31 19:02:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-03-31 19:02:44] apptainer works
[2025-03-31 19:02:45] Set ATHENA_PROC_NUMBER=4
[2025-03-31 19:02:45] Set ATHENA_CORE_NUMBER=4
[2025-03-31 19:02:45] Starting ATLAS job with PandaID=6581219856
[2025-03-31 19:02:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-03-31 23:31:22]  *** The last 200 lines of the pilot log: ***
[2025-03-31 23:31:22] 2025-03-31 21:31:02,293 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-03-31 23:31:22] 2025-03-31 21:31:02,294 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-03-31 23:31:22] 2025-03-31 21:31:02,298 | INFO     | fitting pss+swap vs Time
[2025-03-31 23:31:22] 2025-03-31 21:31:02,298 | INFO     | model: linear, x: [1743440601.0, 1743440662.0, 1743440723.0, 1743440784.0, 1743440845.0, 1743440906.0, 1743440967.0, 1743441028.0, 1743441089.0, 1743441150.0, 1743
[2025-03-31 23:31:22] 2025-03-31 21:31:02,299 | INFO     | sum of square deviations: 5705372090.0
[2025-03-31 23:31:22] 2025-03-31 21:31:02,301 | INFO     | sum of deviations: 105991835239.50002
[2025-03-31 23:31:22] 2025-03-31 21:31:02,302 | INFO     | mean x: 1743448622.5
[2025-03-31 23:31:22] 2025-03-31 21:31:02,302 | INFO     | mean y: 2305715.390151515
[2025-03-31 23:31:22] 2025-03-31 21:31:02,302 | INFO     | -- intersect: -32386698232.037453
[2025-03-31 23:31:22] 2025-03-31 21:31:02,302 | INFO     | intersect: -32386698232.037453
[2025-03-31 23:31:22] 2025-03-31 21:31:02,302 | INFO     | chi2: 4.99158947880277
[2025-03-31 23:31:22] 2025-03-31 21:31:02,303 | INFO     | model: linear, x: [1743440601.0, 1743440662.0, 1743440723.0, 1743440784.0, 1743440845.0, 1743440906.0, 1743440967.0, 1743441028.0, 1743441089.0, 1743441150.0, 1743
[2025-03-31 23:31:22] 2025-03-31 21:31:02,303 | INFO     | sum of square deviations: 5387301010.0
[2025-03-31 23:31:22] 2025-03-31 21:31:02,305 | INFO     | sum of deviations: 120551938079.99998
[2025-03-31 23:31:22] 2025-03-31 21:31:02,305 | INFO     | mean x: 1743448470.0
[2025-03-31 23:31:22] 2025-03-31 21:31:02,305 | INFO     | mean y: 2312573.003861004
[2025-03-31 23:31:22] 2025-03-31 21:31:02,305 | INFO     | -- intersect: -39010932020.342285
[2025-03-31 23:31:22] 2025-03-31 21:31:02,305 | INFO     | intersect: -39010932020.342285
[2025-03-31 23:31:22] 2025-03-31 21:31:02,306 | INFO     | chi2: 4.218879494960286
[2025-03-31 23:31:22] 2025-03-31 21:31:02,306 | INFO     | current chi2=4.218879494960286 (change=15.480239052587672 %)
[2025-03-31 23:31:22] 2025-03-31 21:31:02,306 | INFO     | right removable region: 258
[2025-03-31 23:31:22] 2025-03-31 21:31:02,306 | INFO     | model: linear, x: [1743440906.0, 1743440967.0, 1743441028.0, 1743441089.0, 1743441150.0, 1743441211.0, 1743441272.0, 1743441333.0, 1743441394.0, 1743441455.0, 1743
[2025-03-31 23:31:22] 2025-03-31 21:31:02,307 | INFO     | sum of square deviations: 5387301010.0
[2025-03-31 23:31:22] 2025-03-31 21:31:02,309 | INFO     | sum of deviations: 43130607783.999985
[2025-03-31 23:31:22] 2025-03-31 21:31:02,309 | INFO     | mean x: 1743448775.0
[2025-03-31 23:31:22] 2025-03-31 21:31:02,309 | INFO     | mean y: 2335792.305019305
[2025-03-31 23:31:22] 2025-03-31 21:31:02,309 | INFO     | -- intersect: -13955674938.196234
[2025-03-31 23:31:22] 2025-03-31 21:31:02,309 | INFO     | intersect: -13955674938.196234
[2025-03-31 23:31:22] 2025-03-31 21:31:02,309 | INFO     | chi2: 2.435549626413839
[2025-03-31 23:31:22] 2025-03-31 21:31:02,310 | INFO     | current chi2=2.435549626413839 (change=51.20693244593495 %)
[2025-03-31 23:31:22] 2025-03-31 21:31:02,310 | INFO     | model: linear, x: [1743441211.0, 1743441272.0, 1743441333.0, 1743441394.0, 1743441455.0, 1743441516.0, 1743441577.0, 1743441638.0, 1743441699.0, 1743441760.0, 1743
[2025-03-31 23:31:22] 2025-03-31 21:31:02,312 | INFO     | sum of square deviations: 5081276667.5
[2025-03-31 23:31:22] 2025-03-31 21:31:02,314 | INFO     | sum of deviations: -8101452669.5
[2025-03-31 23:31:22] 2025-03-31 21:31:02,314 | INFO     | mean x: 1743448927.5
[2025-03-31 23:31:22] 2025-03-31 21:31:02,314 | INFO     | mean y: 2361324.397637795
[2025-03-31 23:31:22] 2025-03-31 21:31:02,314 | INFO     | -- intersect: 2782070025.986811
[2025-03-31 23:31:22] 2025-03-31 21:31:02,314 | INFO     | intersect: 2782070025.986811
[2025-03-31 23:31:22] 2025-03-31 21:31:02,315 | INFO     | chi2: 0.8737079720561123
[2025-03-31 23:31:22] 2025-03-31 21:31:02,315 | INFO     | current chi2=0.8737079720561123 (change=64.12686637214695 %)
[2025-03-31 23:31:22] 2025-03-31 21:31:02,315 | INFO     | model: linear, x: [1743441516.0, 1743441577.0, 1743441638.0, 1743441699.0, 1743441760.0, 1743441821.0, 1743441882.0, 1743441943.0, 1743442004.0, 1743442065.0, 1743
[2025-03-31 23:31:22] 2025-03-31 21:31:02,315 | INFO     | sum of square deviations: 4787066500.0
[2025-03-31 23:31:22] 2025-03-31 21:31:02,317 | INFO     | sum of deviations: -14941844348.0
[2025-03-31 23:31:22] 2025-03-31 21:31:02,317 | INFO     | mean x: 1743449080.0
[2025-03-31 23:31:22] 2025-03-31 21:31:02,318 | INFO     | mean y: 2364829.4738955824
[2025-03-31 23:31:22] 2025-03-31 21:31:02,318 | INFO     | -- intersect: 5444182857.701371
[2025-03-31 23:31:22] 2025-03-31 21:31:02,318 | INFO     | intersect: 5444182857.701371
[2025-03-31 23:31:22] 2025-03-31 21:31:02,318 | INFO     | chi2: 0.8082268981624238
[2025-03-31 23:31:22] 2025-03-31 21:31:02,318 | INFO     | current chi2=0.8082268981624238 (change=7.494617880112821 %)
[2025-03-31 23:31:22] 2025-03-31 21:31:02,318 | INFO     | left removable region: 30
[2025-03-31 23:31:22] 2025-03-31 21:31:02,319 | INFO     | model: linear, x: [1743442431.0, 1743442492.0, 1743442553.0, 1743442614.0, 1743442675.0, 1743442736.0, 1743442797.0, 1743442858.0, 1743442919.0, 1743442980.0, 1743
[2025-03-31 23:31:22] 2025-03-31 21:31:02,319 | INFO     | sum of square deviations: 3675146117.0
[2025-03-31 23:31:22] 2025-03-31 21:31:02,320 | INFO     | sum of deviations: 948112935.0000001
[2025-03-31 23:31:22] 2025-03-31 21:31:02,321 | INFO     | mean x: 1743449354.5
[2025-03-31 23:31:22] 2025-03-31 21:31:02,321 | INFO     | mean y: 2373353.8157894737
[2025-03-31 23:31:22] 2025-03-31 21:31:02,321 | INFO     | -- intersect: -447401112.8027444
[2025-03-31 23:31:22] 2025-03-31 21:31:02,321 | INFO     | intersect: -447401112.8027444
[2025-03-31 23:31:22] 2025-03-31 21:31:02,321 | INFO     | chi2: 0.00015705237988306015
[2025-03-31 23:31:22] 2025-03-31 21:31:02,321 | INFO     | -- intersect: -447401112.8027444
[2025-03-31 23:31:22] 2025-03-31 21:31:02,322 | INFO     | current memory leak: 0.26 B/s (using 228 data points, chi2=0.00)
[2025-03-31 23:31:22] 2025-03-31 21:31:02,323 | INFO     | ..............................
[2025-03-31 23:31:22] 2025-03-31 21:31:02,323 | INFO     | . Timing measurements:
[2025-03-31 23:31:22] 2025-03-31 21:31:02,323 | INFO     | . get job = 0 s
[2025-03-31 23:31:22] 2025-03-31 21:31:02,323 | INFO     | . initial setup = 1 s
[2025-03-31 23:31:22] 2025-03-31 21:31:02,323 | INFO     | . payload setup = 6 s
[2025-03-31 23:31:22] 2025-03-31 21:31:02,323 | INFO     | . stage-in = 0 s
[2025-03-31 23:31:22] 2025-03-31 21:31:02,323 | INFO     | . payload execution = 16049 s
[2025-03-31 23:31:22] 2025-03-31 21:31:02,323 | INFO     | . stage-out = 1 s
[2025-03-31 23:31:22] 2025-03-31 21:31:02,323 | INFO     | . log creation = 0 s
[2025-03-31 23:31:22] 2025-03-31 21:31:02,323 | INFO     | ..............................
[2025-03-31 23:31:22] 2025-03-31 21:31:02,872 | INFO     | 
[2025-03-31 23:31:22] 2025-03-31 21:31:02,872 | INFO     | job summary report
[2025-03-31 23:31:22] 2025-03-31 21:31:02,873 | INFO     | --------------------------------------------------
[2025-03-31 23:31:22] 2025-03-31 21:31:02,873 | INFO     | PanDA job id: 6581219856
[2025-03-31 23:31:22] 2025-03-31 21:31:02,873 | INFO     | task id: 43634882
[2025-03-31 23:31:22] 2025-03-31 21:31:02,873 | INFO     | errors: (none)
[2025-03-31 23:31:22] 2025-03-31 21:31:02,873 | INFO     | status: LOG_TRANSFER = DONE 
[2025-03-31 23:31:22] 2025-03-31 21:31:02,873 | INFO     | pilot state: finished 
[2025-03-31 23:31:22] 2025-03-31 21:31:02,873 | INFO     | transexitcode: 0
[2025-03-31 23:31:22] 2025-03-31 21:31:02,873 | INFO     | exeerrorcode: 0
[2025-03-31 23:31:22] 2025-03-31 21:31:02,873 | INFO     | exeerrordiag: 
[2025-03-31 23:31:22] 2025-03-31 21:31:02,873 | INFO     | exitcode: 0
[2025-03-31 23:31:22] 2025-03-31 21:31:02,874 | INFO     | exitmsg: OK
[2025-03-31 23:31:22] 2025-03-31 21:31:02,874 | INFO     | cpuconsumptiontime: 60363 s
[2025-03-31 23:31:22] 2025-03-31 21:31:02,874 | INFO     | nevents: 400
[2025-03-31 23:31:22] 2025-03-31 21:31:02,874 | INFO     | neventsw: 0
[2025-03-31 23:31:22] 2025-03-31 21:31:02,874 | INFO     | pid: 2839591
[2025-03-31 23:31:22] 2025-03-31 21:31:02,874 | INFO     | pgrp: 2839591
[2025-03-31 23:31:22] 2025-03-31 21:31:02,874 | INFO     | corecount: 4
[2025-03-31 23:31:22] 2025-03-31 21:31:02,874 | INFO     | event service: False
[2025-03-31 23:31:22] 2025-03-31 21:31:02,874 | INFO     | sizes: {0: 2411077, 5: 2411283, 11: 2411339, 16059: 2442439, 16061: 2451402, 16064: 2451486, 16073: 2451784}
[2025-03-31 23:31:22] 2025-03-31 21:31:02,874 | INFO     | --------------------------------------------------
[2025-03-31 23:31:22] 2025-03-31 21:31:02,875 | INFO     | 
[2025-03-31 23:31:22] 2025-03-31 21:31:02,875 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-03-31 23:31:22] 2025-03-31 21:31:02,904 | INFO     | queue jobs had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,905 | INFO     | queue payloads had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,905 | INFO     | queue data_in had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,905 | INFO     | queue data_out had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,905 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,906 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,906 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,906 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,906 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,906 | INFO     | queue completed_jobids has 1 job(s)
[2025-03-31 23:31:22] 2025-03-31 21:31:02,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,907 | INFO     | queue messages had 0 job(s) [purged]
[2025-03-31 23:31:22] 2025-03-31 21:31:02,907 | INFO     | job 6581219856 has completed (purged errors)
[2025-03-31 23:31:22] 2025-03-31 21:31:02,907 | INFO     | overall cleanup function is called
[2025-03-31 23:31:22] 2025-03-31 21:31:03,916 | INFO     | --- collectZombieJob: --- 10, [2839591]
[2025-03-31 23:31:22] 2025-03-31 21:31:03,917 | INFO     | zombie collector waiting for pid 2839591
[2025-03-31 23:31:22] 2025-03-31 21:31:03,917 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-03-31 23:31:22] 2025-03-31 21:31:03,917 | INFO     | collected zombie processes
[2025-03-31 23:31:22] 2025-03-31 21:31:03,917 | INFO     | will attempt to kill all subprocesses of pid=2839591
[2025-03-31 23:31:22] 2025-03-31 21:31:04,257 | INFO     | process IDs to be killed: [2839591] (in reverse order)
[2025-03-31 23:31:22] 2025-03-31 21:31:04,522 | WARNING  | found no corresponding commands to process id(s)
[2025-03-31 23:31:22] 2025-03-31 21:31:04,522 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-03-31 23:31:22] 2025-03-31 21:31:04,547 | INFO     | did not find any defunct processes belonging to 2839591
[2025-03-31 23:31:22] 2025-03-31 21:31:04,566 | INFO     | did not find any defunct processes belonging to 2839591
[2025-03-31 23:31:22] 2025-03-31 21:31:04,567 | INFO     | ready for new job
[2025-03-31 23:31:22] 2025-03-31 21:31:04,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-03-31 23:31:22] 2025-03-31 21:31:04,569 | INFO     | ***************************************
[2025-03-31 23:31:22] 2025-03-31 21:31:04,570 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-03-31 23:31:22] 2025-03-31 21:31:04,570 | INFO     | ***************************************
[2025-03-31 23:31:22] 2025-03-31 21:31:04,570 | INFO     | 
[2025-03-31 23:31:22] 2025-03-31 21:31:04,578 | INFO     | architecture information:
[2025-03-31 23:31:22] 2025-03-31 21:31:04,579 | INFO     | executing command: cat /etc/os-release
[2025-03-31 23:31:22] 2025-03-31 21:31:04,604 | INFO     | cat /etc/os-release:
[2025-03-31 23:31:22] NAME="CentOS Linux"
[2025-03-31 23:31:22] VERSION="7 (Core)"
[2025-03-31 23:31:22] ID="centos"
[2025-03-31 23:31:22] ID_LIKE="rhel fedora"
[2025-03-31 23:31:22] VERSION_ID="7"
[2025-03-31 23:31:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-03-31 23:31:22] ANSI_COLOR="0;31"
[2025-03-31 23:31:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-03-31 23:31:22] HOME_URL="https://www.centos.org/"
[2025-03-31 23:31:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-03-31 23:31:22] 
[2025-03-31 23:31:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-03-31 23:31:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-03-31 23:31:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-03-31 23:31:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-03-31 23:31:22] 
[2025-03-31 23:31:22] 2025-03-31 21:31:04,605 | INFO     | ***************************************
[2025-03-31 23:31:22] 2025-03-31 21:31:05,107 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-03-31 23:31:22] 2025-03-31 21:31:05,133 | INFO     | sufficient remaining disk space (3324943269888 B)
[2025-03-31 23:31:22] 2025-03-31 21:31:05,133 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-03-31 23:31:22] 2025-03-31 21:31:05,133 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-03-31 23:31:22] 2025-03-31 21:31:05,134 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-03-31 23:31:22] 2025-03-31 21:31:05,134 | INFO     | aborting loop
[2025-03-31 23:31:22] 2025-03-31 21:31:05,197 | INFO     | found 0 job(s) in 20 queues
[2025-03-31 23:31:22] 2025-03-31 21:31:05,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-03-31 23:31:22] 2025-03-31 21:31:05,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-03-31 23:31:22] 2025-03-31 21:31:05,753 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-03-31 23:31:22] 2025-03-31 21:31:05,955 | INFO     | all data control threads have been joined
[2025-03-31 23:31:22] 2025-03-31 21:31:06,138 | INFO     | [job] retrieve thread has finished
[2025-03-31 23:31:22] 2025-03-31 21:31:06,139 | INFO     | [job] job monitor thread has finished
[2025-03-31 23:31:22] 2025-03-31 21:31:06,242 | INFO     | [payload] execute_payloads thread has finished
[2025-03-31 23:31:22] 2025-03-31 21:31:06,466 | INFO     | all job control threads have been joined
[2025-03-31 23:31:22] 2025-03-31 21:31:06,555 | INFO     | [payload] validate_pre thread has finished
[2025-03-31 23:31:22] 2025-03-31 21:31:06,625 | INFO     | all payload control threads have been joined
[2025-03-31 23:31:22] 2025-03-31 21:31:06,893 | INFO     | [job] create_data_payload thread has finished
[2025-03-31 23:31:22] 2025-03-31 21:31:06,894 | INFO     | [job] validate thread has finished
[2025-03-31 23:31:22] 2025-03-31 21:31:06,960 | INFO     | [data] control thread has finished
[2025-03-31 23:31:22] 2025-03-31 21:31:07,077 | INFO     | [data] copytool_in thread has finished
[2025-03-31 23:31:22] 2025-03-31 21:31:07,115 | INFO     | [payload] failed_post thread has finished
[2025-03-31 23:31:22] 2025-03-31 21:31:07,439 | INFO     | [payload] validate_post thread has finished
[2025-03-31 23:31:22] 2025-03-31 21:31:07,443 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-03-31 23:31:22] 2025-03-31 21:31:07,474 | INFO     | [job] control thread has finished
[2025-03-31 23:31:22] 2025-03-31 21:31:07,631 | INFO     | [payload] control thread has finished
[2025-03-31 23:31:22] 2025-03-31 21:31:07,757 | INFO     | [data] copytool_out thread has finished
[2025-03-31 23:31:22] 2025-03-31 21:31:08,384 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-03-31 23:31:22] 2025-03-31 21:31:08,448 | INFO     | [job] queue monitor thread has finished
[2025-03-31 23:31:22] 2025-03-31 21:31:12,390 | INFO     | [data] queue_monitor thread has finished
[2025-03-31 23:31:22] 2025-03-31 21:31:15,864 | INFO     | job.realtimelogging is not enabled
[2025-03-31 23:31:22] 2025-03-31 21:31:16,865 | INFO     | [payload] run_realtimelog thread has finished
[2025-03-31 23:31:22] 2025-03-31 21:31:17,383 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22866765412160)>', '<ExcThread(monitor, started 22866458281728)>']
[2025-03-31 23:31:22] 2025-03-31 21:31:18,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-03-31 23:31:22] 2025-03-31 21:31:18,262 | INFO     | [monitor] control thread has ended
[2025-03-31 23:31:22] 2025-03-31 21:31:22,398 | INFO     | all workflow threads have been joined
[2025-03-31 23:31:22] 2025-03-31 21:31:22,399 | INFO     | end of generic workflow (traces error code: 0)
[2025-03-31 23:31:22] 2025-03-31 21:31:22,399 | INFO     | traces error code: 0
[2025-03-31 23:31:22] 2025-03-31 21:31:22,399 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-03-31 23:31:22] 2025-03-31 21:31:22,595 [wrapper] ==== pilot stdout END ====
[2025-03-31 23:31:22] 2025-03-31 21:31:22,599 [wrapper] ==== wrapper stdout RESUME ====
[2025-03-31 23:31:22] 2025-03-31 21:31:22,603 [wrapper] pilotpid: 2832117
[2025-03-31 23:31:22] 2025-03-31 21:31:22,607 [wrapper] Pilot exit status: 0
[2025-03-31 23:31:22] 2025-03-31 21:31:22,623 [wrapper] pandaids: 6581219856
[2025-03-31 23:31:22] 2025-03-31 21:31:22,778 [wrapper] cleanup supervisor_pilot 4102626 2832118
[2025-03-31 23:31:22] 2025-03-31 21:31:22,782 [wrapper] Test setup, not cleaning
[2025-03-31 23:31:22] 2025-03-31 21:31:22,786 [wrapper] apfmon messages muted
[2025-03-31 23:31:22] 2025-03-31 21:31:22,790 [wrapper] ==== wrapper stdout END ====
[2025-03-31 23:31:22] 2025-03-31 21:31:22,794 [wrapper] ==== wrapper stderr END ====
[2025-03-31 23:31:22]  *** Error codes and diagnostics ***
[2025-03-31 23:31:22]     "exeErrorCode": 0,
[2025-03-31 23:31:22]     "exeErrorDiag": "",
[2025-03-31 23:31:22]     "pilotErrorCode": 0,
[2025-03-31 23:31:22]     "pilotErrorDiag": "",
[2025-03-31 23:31:22]  *** Listing of results directory ***
[2025-03-31 23:31:22] total 786624
[2025-03-31 23:31:22] -rw-r--r-- 1 boinc boinc    494584 Mar 31 13:45 pilot3.tar.gz
[2025-03-31 23:31:22] -rwx------ 1 boinc boinc     37140 Mar 31 14:01 runpilot2-wrapper.sh
[2025-03-31 23:31:22] -rw-r--r-- 1 boinc boinc      5112 Mar 31 14:01 queuedata.json
[2025-03-31 23:31:22] -rw-r--r-- 1 boinc boinc       100 Mar 31 15:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-03-31 23:31:22] -rwxr-xr-x 1 boinc boinc      7986 Mar 31 15:44 run_atlas
[2025-03-31 23:31:22] -rw-r--r-- 1 boinc boinc       105 Mar 31 15:44 job.xml
[2025-03-31 23:31:22] -rw------- 2 boinc boinc  31391744 Mar 31 15:52 copy_Mk4Rpt
[2025-03-31 23:31:22] -rw------- 2 boinc boinc 120979456 Mar 31 17:04 copy_TLL9U5
[2025-03-31 23:31:22] -rw-r--r-- 2 boinc boinc 344197436 Mar 31 19:02 EVNT.43634880._000630.pool.root.1
[2025-03-31 23:31:22] -rw-r--r-- 2 boinc boinc     17571 Mar 31 19:02 start_atlas.sh
[2025-03-31 23:31:22] drwxrwx--x 2 boinc boinc      4096 Mar 31 19:02 shared
[2025-03-31 23:31:22] -rw-r--r-- 2 boinc boinc    507261 Mar 31 19:02 input.tar.gz
[2025-03-31 23:31:22] -rw-r--r-- 1 boinc boinc         0 Mar 31 19:02 boinc_lockfile
[2025-03-31 23:31:22] -rw-r--r-- 1 boinc boinc      2618 Mar 31 19:02 pandaJob.out
[2025-03-31 23:31:22] -rw------- 1 boinc boinc       424 Mar 31 19:02 setup.sh.local
[2025-03-31 23:31:22] -rw------- 1 boinc boinc    987192 Mar 31 19:02 agis_schedconf.cvmfs.json
[2025-03-31 23:31:22] drwx------ 4 boinc boinc      4096 Mar 31 19:02 pilot3
[2025-03-31 23:31:22] -rw-r--r-- 1 boinc boinc      6682 Mar 31 20:37 init_data.xml
[2025-03-31 23:31:22] -rw-r--r-- 1 boinc boinc       531 Mar 31 23:30 boinc_task_state.xml
[2025-03-31 23:31:22] -rw------- 1 boinc boinc 300952328 Mar 31 23:30 HITS.43634882._003819.pool.root.1
[2025-03-31 23:31:22] -rw------- 1 boinc boinc      1030 Mar 31 23:30 memory_monitor_summary.json
[2025-03-31 23:31:22] -rw------- 1 boinc boinc   1599134 Mar 31 23:30 agis_ddmendpoints.agis.ALL.json
[2025-03-31 23:31:22] -rw------- 1 boinc boinc    373981 Mar 31 23:30 log.43634882._003819.job.log.tgz.1
[2025-03-31 23:31:22] -rw------- 1 boinc boinc        95 Mar 31 23:30 pilot_heartbeat.json
[2025-03-31 23:31:22] -rw-r--r-- 1 boinc boinc      8192 Mar 31 23:31 boinc_mmap_file
[2025-03-31 23:31:22] -rw-r--r-- 1 boinc boinc        28 Mar 31 23:31 wrapper_checkpoint.txt
[2025-03-31 23:31:22] -rw------- 1 boinc boinc      7696 Mar 31 23:31 heartbeat.json
[2025-03-31 23:31:22] -rw------- 1 boinc boinc      4302 Mar 31 23:31 pilotlog.txt
[2025-03-31 23:31:22] -rw------- 1 boinc boinc   1693314 Mar 31 23:31 log.43634882._003819.job.log.1
[2025-03-31 23:31:22] -rw------- 1 boinc boinc       357 Mar 31 23:31 output.list
[2025-03-31 23:31:22] -rw-r--r-- 1 boinc boinc       620 Mar 31 23:31 runtime_log
[2025-03-31 23:31:22] -rw------- 1 boinc boinc   2088960 Mar 31 23:31 result.tar.gz
[2025-03-31 23:31:22] -rw-r--r-- 1 boinc boinc     11425 Mar 31 23:31 runtime_log.err
[2025-03-31 23:31:22] -rw------- 1 boinc boinc       666 Mar 31 23:31 c6hNDme0SJ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmcrpKDm8xUpJn.diag
[2025-03-31 23:31:22] -rw-r--r-- 1 boinc boinc     21275 Mar 31 23:31 stderr.txt
[2025-03-31 23:31:22] HITS file was successfully produced:
[2025-03-31 23:31:22] -rw------- 1 boinc boinc 300952328 Mar 31 23:30 shared/HITS.pool.root.1
[2025-03-31 23:31:22]  *** Contents of shared directory: ***
[2025-03-31 23:31:22] total 781404
[2025-03-31 23:31:22] -rw------- 2 boinc boinc  31391744 Mar 31 15:52 copy_Mk4Rpt
[2025-03-31 23:31:22] -rw------- 2 boinc boinc 120979456 Mar 31 17:04 copy_TLL9U5
[2025-03-31 23:31:22] -rw-r--r-- 2 boinc boinc 344197436 Mar 31 19:02 ATLAS.root_0
[2025-03-31 23:31:22] -rw-r--r-- 2 boinc boinc     17571 Mar 31 19:02 start_atlas.sh
[2025-03-31 23:31:22] -rw-r--r-- 2 boinc boinc    507261 Mar 31 19:02 input.tar.gz
[2025-03-31 23:31:22] -rw------- 1 boinc boinc 300952328 Mar 31 23:30 HITS.pool.root.1
[2025-03-31 23:31:22] -rw------- 1 boinc boinc   2088960 Mar 31 23:31 result.tar.gz
23:31:24 (2828144): run_atlas exited; CPU time 60134.605119
23:31:24 (2828144): called boinc_finish(0)

</stderr_txt>
]]>

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