Name N1uMDmpVSJ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmpppKDmtgZxJm_0
Workunit 231250302
Created 31 Mar 2025, 11:35:55 UTC
Sent 31 Mar 2025, 13:11:26 UTC
Report deadline 8 Apr 2025, 13:11:26 UTC
Received 1 Apr 2025, 11:07:22 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10852154
Run time 7 hours 2 min 4 sec
CPU time 1 days 2 hours 15 min 40 sec
Validate state Valid
Credit 2,619.95
Device peak FLOPS 20.99 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 2.36 GB
Peak swap size 3.08 GB
Peak disk usage 948.56 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:01:53 (5329): wrapper (7.7.26015): starting
05:01:53 (5329): wrapper: running run_atlas (--nthreads 8)
[2025-04-01 05:01:53] Arguments: --nthreads 8
[2025-04-01 05:01:53] Threads: 8
[2025-04-01 05:01:53] Checking for CVMFS
[2025-04-01 05:01:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-01 05:01:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-01 05:01:54] Running cvmfs_config stat atlas.cern.ch
[2025-04-01 05:01:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-01 05:01:55] 2.11.2.0 22880 97348 82028 144352 3 257 18055795 25165825 1840 130560 0 26256663 99.864 24607771 5735 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-04-01 05:01:55] CVMFS is ok
[2025-04-01 05:01:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-01 05:01:55] Checking for apptainer binary...
[2025-04-01 05:01:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-01 05:01:55] Running /usr/bin/apptainer --version
[2025-04-01 05:01:56] apptainer version 1.3.2-1.el7
[2025-04-01 05:01:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-01 05:02:00] cg-vwn348.simple-grid.lan
[2025-04-01 05:02:00] apptainer works
[2025-04-01 05:02:00] Set ATHENA_PROC_NUMBER=8
[2025-04-01 05:02:00] Set ATHENA_CORE_NUMBER=8
[2025-04-01 05:02:01] Starting ATLAS job with PandaID=6581218852
[2025-04-01 05:02:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-01 12:05:45]  *** The last 200 lines of the pilot log: ***
[2025-04-01 12:05:45] 2025-04-01 10:05:24,402 | INFO     | sum of square deviations: 20446541505.0
[2025-04-01 12:05:45] 2025-04-01 10:05:24,407 | INFO     | sum of deviations: 271612286291.0
[2025-04-01 12:05:45] 2025-04-01 10:05:24,407 | INFO     | mean x: 1743489217.5
[2025-04-01 12:05:45] 2025-04-01 10:05:24,407 | INFO     | mean y: 2520979.3960396037
[2025-04-01 12:05:45] 2025-04-01 10:05:24,407 | INFO     | -- intersect: -23158026361.7315
[2025-04-01 12:05:45] 2025-04-01 10:05:24,407 | INFO     | intersect: -23158026361.7315
[2025-04-01 12:05:45] 2025-04-01 10:05:24,408 | INFO     | chi2: 5.3696669889373165
[2025-04-01 12:05:45] 2025-04-01 10:05:24,408 | INFO     | current chi2=5.3696669889373165 (change=12.351968323496166 %)
[2025-04-01 12:05:45] 2025-04-01 10:05:24,408 | INFO     | right removable region: 403
[2025-04-01 12:05:45] 2025-04-01 10:05:24,409 | INFO     | model: linear, x: [1743477231.0, 1743477292.0, 1743477353.0, 1743477414.0, 1743477475.0, 1743477536.0, 1743477597.0, 1743477658.0, 1743477719.0, 1743477780.0, 1743
[2025-04-01 12:05:45] 2025-04-01 10:05:24,409 | INFO     | sum of square deviations: 20446541505.0
[2025-04-01 12:05:45] 2025-04-01 10:05:24,414 | INFO     | sum of deviations: 136602795490.00003
[2025-04-01 12:05:45] 2025-04-01 10:05:24,414 | INFO     | mean x: 1743489522.5
[2025-04-01 12:05:45] 2025-04-01 10:05:24,414 | INFO     | mean y: 2538059.663366337
[2025-04-01 12:05:45] 2025-04-01 10:05:24,414 | INFO     | -- intersect: -11645668685.853193
[2025-04-01 12:05:45] 2025-04-01 10:05:24,414 | INFO     | intersect: -11645668685.853193
[2025-04-01 12:05:45] 2025-04-01 10:05:24,415 | INFO     | chi2: 3.365631787082778
[2025-04-01 12:05:45] 2025-04-01 10:05:24,415 | INFO     | current chi2=3.365631787082778 (change=45.06344581639322 %)
[2025-04-01 12:05:45] 2025-04-01 10:05:24,416 | INFO     | model: linear, x: [1743477536.0, 1743477597.0, 1743477658.0, 1743477719.0, 1743477780.0, 1743477841.0, 1743477902.0, 1743477963.0, 1743478024.0, 1743478085.0, 1743
[2025-04-01 12:05:45] 2025-04-01 10:05:24,416 | INFO     | sum of square deviations: 19696741400.0
[2025-04-01 12:05:45] 2025-04-01 10:05:24,421 | INFO     | sum of deviations: 42623131094.0
[2025-04-01 12:05:45] 2025-04-01 10:05:24,421 | INFO     | mean x: 1743489675.0
[2025-04-01 12:05:45] 2025-04-01 10:05:24,421 | INFO     | mean y: 2557173.812030075
[2025-04-01 12:05:45] 2025-04-01 10:05:24,422 | INFO     | -- intersect: -3770299841.9459395
[2025-04-01 12:05:45] 2025-04-01 10:05:24,422 | INFO     | intersect: -3770299841.9459395
[2025-04-01 12:05:45] 2025-04-01 10:05:24,422 | INFO     | chi2: 1.5343651794707376
[2025-04-01 12:05:45] 2025-04-01 10:05:24,423 | INFO     | current chi2=1.5343651794707376 (change=54.41078298108552 %)
[2025-04-01 12:05:45] 2025-04-01 10:05:24,423 | INFO     | model: linear, x: [1743477841.0, 1743477902.0, 1743477963.0, 1743478024.0, 1743478085.0, 1743478146.0, 1743478207.0, 1743478268.0, 1743478329.0, 1743478390.0, 1743
[2025-04-01 12:05:45] 2025-04-01 10:05:24,423 | INFO     | sum of square deviations: 18965499782.5
[2025-04-01 12:05:45] 2025-04-01 10:05:24,428 | INFO     | sum of deviations: -10760271106.999996
[2025-04-01 12:05:45] 2025-04-01 10:05:24,428 | INFO     | mean x: 1743489827.5
[2025-04-01 12:05:45] 2025-04-01 10:05:24,428 | INFO     | mean y: 2568271.8578680204
[2025-04-01 12:05:45] 2025-04-01 10:05:24,428 | INFO     | -- intersect: 991755133.8622867
[2025-04-01 12:05:45] 2025-04-01 10:05:24,428 | INFO     | intersect: 991755133.8622867
[2025-04-01 12:05:45] 2025-04-01 10:05:24,429 | INFO     | chi2: 0.8287512541539471
[2025-04-01 12:05:45] 2025-04-01 10:05:24,429 | INFO     | current chi2=0.8287512541539471 (change=45.98735260403812 %)
[2025-04-01 12:05:45] 2025-04-01 10:05:24,429 | INFO     | model: linear, x: [1743478146.0, 1743478207.0, 1743478268.0, 1743478329.0, 1743478390.0, 1743478451.0, 1743478512.0, 1743478573.0, 1743478634.0, 1743478695.0, 1743
[2025-04-01 12:05:45] 2025-04-01 10:05:24,430 | INFO     | sum of square deviations: 18252584090.0
[2025-04-01 12:05:45] 2025-04-01 10:05:24,434 | INFO     | sum of deviations: -17562443631.999996
[2025-04-01 12:05:45] 2025-04-01 10:05:24,434 | INFO     | mean x: 1743489980.0
[2025-04-01 12:05:45] 2025-04-01 10:05:24,434 | INFO     | mean y: 2569717.473007712
[2025-04-01 12:05:45] 2025-04-01 10:05:24,434 | INFO     | -- intersect: 1680137361.9076648
[2025-04-01 12:05:45] 2025-04-01 10:05:24,434 | INFO     | intersect: 1680137361.9076648
[2025-04-01 12:05:45] 2025-04-01 10:05:24,435 | INFO     | chi2: 0.8061492617394908
[2025-04-01 12:05:45] 2025-04-01 10:05:24,435 | INFO     | current chi2=0.8061492617394908 (change=2.7272347765591283 %)
[2025-04-01 12:05:45] 2025-04-01 10:05:24,435 | INFO     | left removable region: 40
[2025-04-01 12:05:45] 2025-04-01 10:05:24,436 | INFO     | model: linear, x: [1743479366.0, 1743479427.0, 1743479488.0, 1743479549.0, 1743479610.0, 1743479671.0, 1743479732.0, 1743479793.0, 1743479854.0, 1743479915.0, 1743
[2025-04-01 12:05:45] 2025-04-01 10:05:24,436 | INFO     | sum of square deviations: 14831839022.0
[2025-04-01 12:05:45] 2025-04-01 10:05:24,440 | INFO     | sum of deviations: 12971986903.000004
[2025-04-01 12:05:45] 2025-04-01 10:05:24,440 | INFO     | mean x: 1743490407.0
[2025-04-01 12:05:45] 2025-04-01 10:05:24,440 | INFO     | mean y: 2574444.628099174
[2025-04-01 12:05:45] 2025-04-01 10:05:24,440 | INFO     | -- intersect: -1522289376.4775062
[2025-04-01 12:05:45] 2025-04-01 10:05:24,440 | INFO     | intersect: -1522289376.4775062
[2025-04-01 12:05:45] 2025-04-01 10:05:24,441 | INFO     | chi2: 0.015421373336932895
[2025-04-01 12:05:45] 2025-04-01 10:05:24,441 | INFO     | -- intersect: -1522289376.4775062
[2025-04-01 12:05:45] 2025-04-01 10:05:24,441 | INFO     | current memory leak: 0.87 B/s (using 363 data points, chi2=0.02)
[2025-04-01 12:05:45] 2025-04-01 10:05:24,442 | INFO     | ..............................
[2025-04-01 12:05:45] 2025-04-01 10:05:24,442 | INFO     | . Timing measurements:
[2025-04-01 12:05:45] 2025-04-01 10:05:24,443 | INFO     | . get job = 0 s
[2025-04-01 12:05:45] 2025-04-01 10:05:24,443 | INFO     | . initial setup = 2 s
[2025-04-01 12:05:45] 2025-04-01 10:05:24,443 | INFO     | . payload setup = 54 s
[2025-04-01 12:05:45] 2025-04-01 10:05:24,443 | INFO     | . stage-in = 0 s
[2025-04-01 12:05:45] 2025-04-01 10:05:24,443 | INFO     | . payload execution = 25032 s
[2025-04-01 12:05:45] 2025-04-01 10:05:24,443 | INFO     | . stage-out = 4 s
[2025-04-01 12:05:45] 2025-04-01 10:05:24,443 | INFO     | . log creation = 2 s
[2025-04-01 12:05:45] 2025-04-01 10:05:24,443 | INFO     | ..............................
[2025-04-01 12:05:45] 2025-04-01 10:05:24,801 | INFO     | 
[2025-04-01 12:05:45] 2025-04-01 10:05:24,801 | INFO     | job summary report
[2025-04-01 12:05:45] 2025-04-01 10:05:24,801 | INFO     | --------------------------------------------------
[2025-04-01 12:05:45] 2025-04-01 10:05:24,801 | INFO     | PanDA job id: 6581218852
[2025-04-01 12:05:45] 2025-04-01 10:05:24,801 | INFO     | task id: 43634882
[2025-04-01 12:05:45] 2025-04-01 10:05:24,801 | INFO     | errors: (none)
[2025-04-01 12:05:45] 2025-04-01 10:05:24,801 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-01 12:05:45] 2025-04-01 10:05:24,801 | INFO     | pilot state: finished 
[2025-04-01 12:05:45] 2025-04-01 10:05:24,802 | INFO     | transexitcode: 0
[2025-04-01 12:05:45] 2025-04-01 10:05:24,802 | INFO     | exeerrorcode: 0
[2025-04-01 12:05:45] 2025-04-01 10:05:24,802 | INFO     | exeerrordiag: 
[2025-04-01 12:05:45] 2025-04-01 10:05:24,802 | INFO     | exitcode: 0
[2025-04-01 12:05:45] 2025-04-01 10:05:24,802 | INFO     | exitmsg: OK
[2025-04-01 12:05:45] 2025-04-01 10:05:24,802 | INFO     | cpuconsumptiontime: 94411 s
[2025-04-01 12:05:45] 2025-04-01 10:05:24,802 | INFO     | nevents: 400
[2025-04-01 12:05:45] 2025-04-01 10:05:24,802 | INFO     | neventsw: 0
[2025-04-01 12:05:45] 2025-04-01 10:05:24,802 | INFO     | pid: 20526
[2025-04-01 12:05:45] 2025-04-01 10:05:24,802 | INFO     | pgrp: 20526
[2025-04-01 12:05:45] 2025-04-01 10:05:24,802 | INFO     | corecount: 8
[2025-04-01 12:05:45] 2025-04-01 10:05:24,802 | INFO     | event service: False
[2025-04-01 12:05:45] 2025-04-01 10:05:24,803 | INFO     | sizes: {0: 2410841, 1: 2411096, 12: 2411096, 23: 2411124, 34: 2411152, 44: 2411180, 55: 2411336, 59: 2411570, 66: 2411598, 25091: 2447152, 25096: 2456095, 25098: 2
[2025-04-01 12:05:45] 2025-04-01 10:05:24,803 | INFO     | --------------------------------------------------
[2025-04-01 12:05:45] 2025-04-01 10:05:24,803 | INFO     | 
[2025-04-01 12:05:45] 2025-04-01 10:05:24,803 | INFO     | executing command: ls -lF /var/lib/boinc/slots/28
[2025-04-01 12:05:45] 2025-04-01 10:05:25,086 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,087 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,087 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,087 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,087 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,087 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,087 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,087 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,087 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,087 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,088 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,088 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,088 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,088 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,088 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,088 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,088 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,088 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-01 12:05:45] 2025-04-01 10:05:25,088 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,088 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-01 12:05:45] 2025-04-01 10:05:25,088 | INFO     | job 6581218852 has completed (purged errors)
[2025-04-01 12:05:45] 2025-04-01 10:05:25,089 | INFO     | overall cleanup function is called
[2025-04-01 12:05:45] 2025-04-01 10:05:26,097 | INFO     | --- collectZombieJob: --- 10, [20526]
[2025-04-01 12:05:45] 2025-04-01 10:05:26,097 | INFO     | zombie collector waiting for pid 20526
[2025-04-01 12:05:45] 2025-04-01 10:05:26,097 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-01 12:05:45] 2025-04-01 10:05:26,097 | INFO     | collected zombie processes
[2025-04-01 12:05:45] 2025-04-01 10:05:26,097 | INFO     | will attempt to kill all subprocesses of pid=20526
[2025-04-01 12:05:45] 2025-04-01 10:05:26,783 | INFO     | process IDs to be killed: [20526] (in reverse order)
[2025-04-01 12:05:45] 2025-04-01 10:05:27,597 | WARNING  | found no corresponding commands to process id(s)
[2025-04-01 12:05:45] 2025-04-01 10:05:27,598 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-01 12:05:45] 2025-04-01 10:05:27,601 | INFO     | did not find any defunct processes belonging to 20526
[2025-04-01 12:05:45] 2025-04-01 10:05:27,604 | INFO     | did not find any defunct processes belonging to 20526
[2025-04-01 12:05:45] 2025-04-01 10:05:27,604 | INFO     | ready for new job
[2025-04-01 12:05:45] 2025-04-01 10:05:27,604 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-01 12:05:45] 2025-04-01 10:05:27,606 | INFO     | ***************************************
[2025-04-01 12:05:45] 2025-04-01 10:05:27,606 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-01 12:05:45] 2025-04-01 10:05:27,606 | INFO     | ***************************************
[2025-04-01 12:05:45] 2025-04-01 10:05:27,606 | INFO     | 
[2025-04-01 12:05:45] 2025-04-01 10:05:27,607 | INFO     | pilot is running in a VM
[2025-04-01 12:05:45] 2025-04-01 10:05:27,607 | INFO     | architecture information:
[2025-04-01 12:05:45] 2025-04-01 10:05:27,607 | INFO     | executing command: cat /etc/os-release
[2025-04-01 12:05:45] 2025-04-01 10:05:27,932 | INFO     | cat /etc/os-release:
[2025-04-01 12:05:45] NAME="CentOS Linux"
[2025-04-01 12:05:45] VERSION="7 (Core)"
[2025-04-01 12:05:45] ID="centos"
[2025-04-01 12:05:45] ID_LIKE="rhel fedora"
[2025-04-01 12:05:45] VERSION_ID="7"
[2025-04-01 12:05:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-01 12:05:45] ANSI_COLOR="0;31"
[2025-04-01 12:05:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-01 12:05:45] HOME_URL="https://www.centos.org/"
[2025-04-01 12:05:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-01 12:05:45] 
[2025-04-01 12:05:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-01 12:05:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-01 12:05:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-01 12:05:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-01 12:05:45] 
[2025-04-01 12:05:45] 2025-04-01 10:05:27,932 | INFO     | ***************************************
[2025-04-01 12:05:45] 2025-04-01 10:05:28,436 | INFO     | executing command: df -mP /var/lib/boinc/slots/28
[2025-04-01 12:05:45] 2025-04-01 10:05:28,664 | INFO     | PID=11334 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-01 12:05:45] 2025-04-01 10:05:28,665 | INFO     | .. there are 9 such processes running
[2025-04-01 12:05:45] 2025-04-01 10:05:28,689 | INFO     | sufficient remaining disk space (386877358080 B)
[2025-04-01 12:05:45] 2025-04-01 10:05:28,689 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-01 12:05:45] 2025-04-01 10:05:28,690 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-01 12:05:45] 2025-04-01 10:05:28,692 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-01 12:05:45] 2025-04-01 10:05:28,692 | INFO     | found 0 job(s) in 20 queues
[2025-04-01 12:05:45] 2025-04-01 10:05:28,692 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-01 12:05:45] 2025-04-01 10:05:28,692 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-01 12:05:45] 2025-04-01 10:05:28,736 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-01 12:05:45] 2025-04-01 10:05:29,093 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-01 12:05:45] 2025-04-01 10:05:29,093 | INFO     | aborting loop
[2025-04-01 12:05:45] 2025-04-01 10:05:29,580 | INFO     | all job control threads have been joined
[2025-04-01 12:05:45] 2025-04-01 10:05:29,695 | INFO     | [job] retrieve thread has finished
[2025-04-01 12:05:45] 2025-04-01 10:05:29,697 | INFO     | all data control threads have been joined
[2025-04-01 12:05:45] 2025-04-01 10:05:29,754 | INFO     | [payload] validate_pre thread has finished
[2025-04-01 12:05:45] 2025-04-01 10:05:29,815 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-01 12:05:45] 2025-04-01 10:05:29,902 | INFO     | all payload control threads have been joined
[2025-04-01 12:05:45] 2025-04-01 10:05:30,099 | INFO     | [job] job monitor thread has finished
[2025-04-01 12:05:45] 2025-04-01 10:05:30,153 | INFO     | [payload] execute_payloads thread has finished
[2025-04-01 12:05:45] 2025-04-01 10:05:30,477 | INFO     | [data] copytool_in thread has finished
[2025-04-01 12:05:45] 2025-04-01 10:05:30,551 | INFO     | [job] validate thread has finished
[2025-04-01 12:05:45] 2025-04-01 10:05:30,553 | INFO     | [job] create_data_payload thread has finished
[2025-04-01 12:05:45] 2025-04-01 10:05:30,561 | INFO     | [payload] validate_post thread has finished
[2025-04-01 12:05:45] 2025-04-01 10:05:30,586 | INFO     | [job] control thread has finished
[2025-04-01 12:05:45] 2025-04-01 10:05:30,704 | INFO     | [data] control thread has finished
[2025-04-01 12:05:45] 2025-04-01 10:05:30,743 | INFO     | [data] copytool_out thread has finished
[2025-04-01 12:05:45] 2025-04-01 10:05:30,821 | INFO     | [job] queue monitor thread has finished
[2025-04-01 12:05:45] 2025-04-01 10:05:30,865 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-01 12:05:45] 2025-04-01 10:05:30,908 | INFO     | [payload] control thread has finished
[2025-04-01 12:05:45] 2025-04-01 10:05:30,919 | INFO     | [payload] failed_post thread has finished
[2025-04-01 12:05:45] 2025-04-01 10:05:31,744 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-01 12:05:45] 2025-04-01 10:05:35,753 | INFO     | [data] queue_monitor thread has finished
[2025-04-01 12:05:45] 2025-04-01 10:05:37,224 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140263133681472)>', '<ExcThread(monitor, started 140262550529792)>']
[2025-04-01 12:05:45] 2025-04-01 10:05:37,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-01 12:05:45] 2025-04-01 10:05:37,749 | INFO     | [monitor] control thread has ended
[2025-04-01 12:05:45] 2025-04-01 10:05:42,250 | INFO     | all workflow threads have been joined
[2025-04-01 12:05:45] 2025-04-01 10:05:42,250 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-01 12:05:45] 2025-04-01 10:05:42,250 | INFO     | traces error code: 0
[2025-04-01 12:05:45] 2025-04-01 10:05:42,250 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-01 12:05:45] 2025-04-01 10:05:42,416 [wrapper] ==== pilot stdout END ====
[2025-04-01 12:05:45] 2025-04-01 10:05:42,503 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-01 12:05:45] 2025-04-01 10:05:42,594 [wrapper] pilotpid: 11334
[2025-04-01 12:05:45] 2025-04-01 10:05:42,702 [wrapper] Pilot exit status: 0
[2025-04-01 12:05:45] 2025-04-01 10:05:43,245 [wrapper] pandaids: 6581218852
[2025-04-01 12:05:45] 2025-04-01 10:05:43,900 [wrapper] cleanup supervisor_pilot 29326 11335
[2025-04-01 12:05:45] 2025-04-01 10:05:43,983 [wrapper] Test setup, not cleaning
[2025-04-01 12:05:45] 2025-04-01 10:05:43,994 [wrapper] apfmon messages muted
[2025-04-01 12:05:45] 2025-04-01 10:05:43,998 [wrapper] ==== wrapper stdout END ====
[2025-04-01 12:05:45] 2025-04-01 10:05:44,001 [wrapper] ==== wrapper stderr END ====
[2025-04-01 12:05:45]  *** Error codes and diagnostics ***
[2025-04-01 12:05:45]     "exeErrorCode": 0,
[2025-04-01 12:05:45]     "exeErrorDiag": "",
[2025-04-01 12:05:45]     "pilotErrorCode": 0,
[2025-04-01 12:05:45]     "pilotErrorDiag": "",
[2025-04-01 12:05:45]  *** Listing of results directory ***
[2025-04-01 12:05:45] total 639196
[2025-04-01 12:05:45] -rwx------. 1 boinc boinc     37140 Mar 31 13:29 runpilot2-wrapper.sh
[2025-04-01 12:05:45] -rw-r--r--. 1 boinc boinc    494584 Mar 31 13:31 pilot3.tar.gz
[2025-04-01 12:05:45] -rw-r--r--. 1 boinc boinc      5112 Mar 31 13:31 queuedata.json
[2025-04-01 12:05:45] -rw-r--r--. 1 boinc boinc       100 Apr  1 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-01 12:05:45] -rwxr-xr-x. 1 boinc boinc      7986 Apr  1 05:01 run_atlas
[2025-04-01 12:05:45] -rw-r--r--. 1 boinc boinc       105 Apr  1 05:01 job.xml
[2025-04-01 12:05:45] -rw-r--r--. 2 boinc boinc 342057456 Apr  1 05:01 EVNT.43634880._000611.pool.root.1
[2025-04-01 12:05:45] -rw-r--r--. 2 boinc boinc     17571 Apr  1 05:01 start_atlas.sh
[2025-04-01 12:05:45] drwxrwx--x. 2 boinc boinc        68 Apr  1 05:01 shared
[2025-04-01 12:05:45] -rw-r--r--. 2 boinc boinc    507269 Apr  1 05:01 input.tar.gz
[2025-04-01 12:05:45] -rw-r--r--. 1 boinc boinc      6315 Apr  1 05:01 init_data.xml
[2025-04-01 12:05:45] -rw-r--r--. 1 boinc boinc         0 Apr  1 05:01 boinc_lockfile
[2025-04-01 12:05:45] -rw-r--r--. 1 boinc boinc      2619 Apr  1 05:02 pandaJob.out
[2025-04-01 12:05:45] -rw-------. 1 boinc boinc       424 Apr  1 05:02 setup.sh.local
[2025-04-01 12:05:45] -rw-------. 1 boinc boinc    987829 Apr  1 05:04 agis_schedconf.cvmfs.json
[2025-04-01 12:05:45] drwx------. 4 boinc boinc      4096 Apr  1 05:04 pilot3
[2025-04-01 12:05:45] -rw-------. 1 boinc boinc 302286463 Apr  1 12:02 HITS.43634882._003345.pool.root.1
[2025-04-01 12:05:45] -rw-r--r--. 1 boinc boinc       530 Apr  1 12:03 boinc_task_state.xml
[2025-04-01 12:05:45] -rw-------. 1 boinc boinc      1018 Apr  1 12:04 memory_monitor_summary.json
[2025-04-01 12:05:45] -rw-------. 1 boinc boinc   1599134 Apr  1 12:04 agis_ddmendpoints.agis.ALL.json
[2025-04-01 12:05:45] -rw-------. 1 boinc boinc    519679 Apr  1 12:04 log.43634882._003345.job.log.tgz.1
[2025-04-01 12:05:45] -rw-------. 1 boinc boinc        95 Apr  1 12:05 pilot_heartbeat.json
[2025-04-01 12:05:45] -rw-------. 1 boinc boinc      7681 Apr  1 12:05 heartbeat.json
[2025-04-01 12:05:45] -rw-r--r--. 1 boinc boinc      8192 Apr  1 12:05 boinc_mmap_file
[2025-04-01 12:05:45] -rw-r--r--. 1 boinc boinc        28 Apr  1 12:05 wrapper_checkpoint.txt
[2025-04-01 12:05:45] -rw-------. 1 boinc boinc      4798 Apr  1 12:05 pilotlog.txt
[2025-04-01 12:05:45] -rw-------. 1 boinc boinc   2663468 Apr  1 12:05 log.43634882._003345.job.log.1
[2025-04-01 12:05:45] -rw-------. 1 boinc boinc       357 Apr  1 12:05 output.list
[2025-04-01 12:05:45] -rw-r--r--. 1 boinc boinc       620 Apr  1 12:05 runtime_log
[2025-04-01 12:05:45] -rw-------. 1 boinc boinc   3205120 Apr  1 12:05 result.tar.gz
[2025-04-01 12:05:45] -rw-r--r--. 1 boinc boinc     11032 Apr  1 12:05 runtime_log.err
[2025-04-01 12:05:45] -rw-------. 1 boinc boinc       658 Apr  1 12:05 N1uMDmpVSJ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmpppKDmtgZxJm.diag
[2025-04-01 12:05:45] -rw-r--r--. 1 boinc boinc     21313 Apr  1 12:05 stderr.txt
[2025-04-01 12:05:45] HITS file was successfully produced:
[2025-04-01 12:05:45] -rw-------. 1 boinc boinc 302286463 Apr  1 12:02 shared/HITS.pool.root.1
[2025-04-01 12:05:45]  *** Contents of shared directory: ***
[2025-04-01 12:05:45] total 632896
[2025-04-01 12:05:45] -rw-r--r--. 2 boinc boinc 342057456 Apr  1 05:01 ATLAS.root_0
[2025-04-01 12:05:45] -rw-r--r--. 2 boinc boinc     17571 Apr  1 05:01 start_atlas.sh
[2025-04-01 12:05:45] -rw-r--r--. 2 boinc boinc    507269 Apr  1 05:01 input.tar.gz
[2025-04-01 12:05:45] -rw-------. 1 boinc boinc 302286463 Apr  1 12:02 HITS.pool.root.1
[2025-04-01 12:05:45] -rw-------. 1 boinc boinc   3205120 Apr  1 12:05 result.tar.gz
12:05:47 (5329): run_atlas exited; CPU time 94426.824353
12:05:47 (5329): called boinc_finish(0)

</stderr_txt>
]]>


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