Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-03-31 15:35:23 (21276): Detected: vboxwrapper 26206
2025-03-31 15:35:23 (21276): Detected: BOINC client v8.0.2
2025-03-31 15:35:24 (21276): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-03-31 15:35:24 (21276): Successfully copied 'init_data.xml' to the shared directory.
2025-03-31 15:35:25 (21276): Create VM. (boinc_602cfc0c409a545e, slot#0)
2025-03-31 15:35:26 (21276): Setting Memory Size for VM. (4800MB)
2025-03-31 15:35:26 (21276): Setting CPU Count for VM. (8)
2025-03-31 15:35:26 (21276): Setting Chipset Options for VM.
2025-03-31 15:35:26 (21276): Setting Graphics Controller Options for VM.
2025-03-31 15:35:27 (21276): Setting Boot Options for VM.
2025-03-31 15:35:27 (21276): Setting Network Configuration for NAT.
2025-03-31 15:35:27 (21276): Enabling VM Network Access.
2025-03-31 15:35:27 (21276): Disabling USB Support for VM.
2025-03-31 15:35:28 (21276): Disabling COM Port Support for VM.
2025-03-31 15:35:28 (21276): Disabling LPT Port Support for VM.
2025-03-31 15:35:28 (21276): Disabling Audio Support for VM.
2025-03-31 15:35:28 (21276): Disabling Clipboard Support for VM.
2025-03-31 15:35:29 (21276): Disabling Drag and Drop Support for VM.
2025-03-31 15:35:29 (21276): Adding storage controller(s) to VM.
2025-03-31 15:35:29 (21276): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-03-31 15:35:32 (21276): Adding VirtualBox Guest Additions to VM.
2025-03-31 15:35:32 (21276): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-03-31 15:35:33 (21276): forwarding host port 60326 to guest port 80
2025-03-31 15:35:33 (21276): Enabling remote desktop for VM.
2025-03-31 15:35:33 (21276): Enabling shared directory for VM.
2025-03-31 15:35:34 (21276): Starting VM using VBoxManage interface. (boinc_602cfc0c409a545e, slot#0)
2025-03-31 15:35:39 (21276): Successfully started VM. (PID = '11844')
2025-03-31 15:35:39 (21276): Reporting VM Process ID to BOINC.
2025-03-31 15:35:39 (21276): Guest Log: BIOS: VirtualBox 7.1.6
2025-03-31 15:35:39 (21276): Guest Log: CPUID EDX: 0x178bfbff
2025-03-31 15:35:39 (21276): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-03-31 15:35:39 (21276): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-03-31 15:35:39 (21276): VM state change detected. (old = 'poweredoff', new = 'running')
2025-03-31 15:35:39 (21276): Detected: Web Application Enabled (http://localhost:60326)
2025-03-31 15:35:39 (21276): Detected: Remote Desktop Enabled (localhost:60327)
2025-03-31 15:35:39 (21276): Preference change detected
2025-03-31 15:35:39 (21276): Setting CPU throttle for VM. (100%)
2025-03-31 15:35:40 (21276): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-03-31 15:35:41 (21276): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-03-31 15:35:41 (21276): Guest Log: BIOS: Booting from Hard Disk...
2025-03-31 15:35:44 (21276): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-03-31 15:35:44 (21276): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-03-31 15:35:44 (21276): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-03-31 15:35:49 (21276): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-03-31 15:35:49 (21276): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-03-31 15:35:54 (21276): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-03-31 15:35:54 (21276): Guest Log: 00:00:00.000124 main     Log opened 2025-03-31T15:35:52.111639000Z
2025-03-31 15:35:54 (21276): Guest Log: 00:00:00.000196 main     OS Product: Linux
2025-03-31 15:35:54 (21276): Guest Log: 00:00:00.000229 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-03-31 15:35:54 (21276): Guest Log: 00:00:00.000252 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-03-31 15:35:54 (21276): Guest Log: 00:00:00.000275 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-03-31 15:35:54 (21276): Guest Log: 00:00:00.000275 main     Process ID: 1373
2025-03-31 15:35:54 (21276): Guest Log: 00:00:00.000276 main     Package type: LINUX_64BITS_GENERIC
2025-03-31 15:35:54 (21276): Guest Log: 00:00:00.001561 main     5.2.32 r132073 started. Verbose level = 0
2025-03-31 15:35:54 (21276): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-03-31 15:35:54 (21276): Guest Log: [INFO] Mounting shared directory
2025-03-31 15:35:54 (21276): Guest Log: [INFO] Checking for init_data.xml
2025-03-31 15:36:04 (21276): Guest Log: 00:00:10.012324 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 604 461 000ns (GuestNow=1 743 428 164 510 162 000 ns GuestLast=1 743 435 352 114 623 000 ns fSetTimeLastLoop=true )
2025-03-31 15:36:53 (21276): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-03-31 15:36:53 (21276): Guest Log: [INFO] Detected branch: prod
2025-03-31 15:36:53 (21276): Guest Log: This is the prod version of the ATLAS job wrapper
2025-03-31 15:36:53 (21276): Guest Log: Copying input files
2025-03-31 15:36:55 (21276): Guest Log: Copied input files into RunAtlas.
2025-03-31 15:36:55 (21276): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-03-31 15:36:55 (21276): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-03-31 15:36:55 (21276): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-03-31 15:36:55 (21276): Guest Log: Further information can be found at the LHC@home message board.
2025-03-31 15:38:59 (21276): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-03-31 15:38:59 (21276): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-03-31 15:38:59 (21276): Guest Log: 2.6.3.0 1677 2 32264 144328 4 1 3117321 4096000 0 65024 0 0 n/a 1 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-03-31 15:39:00 (21276): Guest Log: copied the webapp to /var/www
2025-03-31 15:39:00 (21276): Guest Log: ATHENA_PROC_NUMBER=8
2025-03-31 15:39:00 (21276): Guest Log: ATHENA_CORE_NUMBER=8
2025-03-31 15:39:00 (21276): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-03-31 15:39:00 (21276): Guest Log:  *** Starting ATLAS job. (PandaID=6581215467 taskID=43634882) ***
2025-03-31 15:48:10 (21276): Guest Log:  *** Job finished ***
2025-03-31 15:48:10 (21276): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:00,181 | INFO     | [job] control thread has finished
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:00,190 | INFO     | [data] copytool_out thread has finished
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:04,007 | INFO     | [data] queue_monitor thread has finished
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:04,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139713504417600)>', '<ExcThread(monitor, started 139712903755520)>']
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:05,009 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:05,009 | INFO     | [monitor] control thread has ended
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:09,026 | INFO     | all workflow threads have been joined
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:09,026 | INFO     | end of generic workflow (traces error code: 0)
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:09,026 | INFO     | traces error code: 0
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:09,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:09,097 [wrapper] ==== pilot stdout END ====
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:09,101 [wrapper] ==== wrapper stdout RESUME ====
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:09,105 [wrapper] pilotpid: 6104
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:09,108 [wrapper] Pilot exit status: 0
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:09,194 [wrapper] pandaids: 6581215467
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:09,222 [wrapper] cleanup supervisor_pilot  6110 6105
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:09,228 [wrapper] Test setup, not cleaning
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:09,233 [wrapper] apfmon messages muted
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:09,237 [wrapper] ==== wrapper stdout END ====
2025-03-31 15:48:10 (21276): Guest Log: 2025-03-31 13:48:09,241 [wrapper] ==== wrapper stderr END ====
2025-03-31 15:48:10 (21276): Guest Log:  *** Error codes and diagnostics ***
2025-03-31 15:48:10 (21276): Guest Log:     "exeErrorCode": 65,
2025-03-31 15:48:10 (21276): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
2025-03-31 15:48:10 (21276): Guest Log:     "pilotErrorCode": 1305,
2025-03-31 15:48:10 (21276): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
2025-03-31 15:48:10 (21276): Guest Log:  *** Listing of results directory ***
2025-03-31 15:48:10 (21276): Guest Log: total 3880
2025-03-31 15:48:10 (21276): Guest Log: -rw-r--r--. 1 atlas atlas  494584 Mar 31 10:49 pilot3.tar.gz
2025-03-31 15:48:10 (21276): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Mar 31 11:23 queuedata.json
2025-03-31 15:48:10 (21276): Guest Log: -rwx------. 1 atlas atlas   37140 Mar 31 11:24 runpilot2-wrapper.sh
2025-03-31 15:48:10 (21276): Guest Log: -rwxr-xr-x. 1 atlas atlas    9128 Mar 31 13:36 init_data.xml
2025-03-31 15:48:10 (21276): Guest Log: -rwxr-xr-x. 1 atlas atlas  507267 Mar 31 13:36 input.tar.gz
2025-03-31 15:48:10 (21276): Guest Log: -rwxr-xr-x. 1 atlas atlas   17571 Mar 31 13:36 start_atlas.sh
2025-03-31 15:48:10 (21276): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Mar 31 13:36 EVNT.43634880._000535.pool.root.1 -> /data/./ATLAS.root_0
2025-03-31 15:48:10 (21276): Guest Log: -rw-r--r--. 1 atlas atlas    2615 Mar 31 13:38 pandaJob.out
2025-03-31 15:48:10 (21276): Guest Log: -rw-------. 1 atlas atlas     424 Mar 31 13:39 setup.sh.local
2025-03-31 15:48:10 (21276): Guest Log: -rw-------. 1 atlas atlas  987184 Mar 31 13:43 agis_schedconf.cvmfs.json
2025-03-31 15:48:10 (21276): Guest Log: -rw-------. 1 atlas atlas 1599134 Mar 31 13:43 agis_ddmendpoints.agis.ALL.json
2025-03-31 15:48:10 (21276): Guest Log: drwx------. 4 atlas atlas    4096 Mar 31 13:43 pilot3
2025-03-31 15:48:10 (21276): Guest Log: -rw-------. 1 atlas atlas    1004 Mar 31 13:45 memory_monitor_summary.json
2025-03-31 15:48:10 (21276): Guest Log: -rw-------. 1 atlas atlas   20477 Mar 31 13:45 log.43634882._001431.job.log.tgz.1
2025-03-31 15:48:10 (21276): Guest Log: -rw-------. 1 atlas atlas      95 Mar 31 13:47 pilot_heartbeat.json
2025-03-31 15:48:10 (21276): Guest Log: -rw-------. 1 atlas atlas    8360 Mar 31 13:47 heartbeat.json
2025-03-31 15:48:10 (21276): Guest Log: -rw-------. 1 atlas atlas    4279 Mar 31 13:48 pilotlog.txt
2025-03-31 15:48:10 (21276): Guest Log: -rw-------. 1 atlas atlas   82579 Mar 31 13:48 log.43634882._001431.job.log.1
2025-03-31 15:48:10 (21276): Guest Log: -rw-------. 1 atlas atlas     188 Mar 31 13:48 output.list
2025-03-31 15:48:10 (21276): Guest Log: -rw-r--r--. 1 atlas atlas     620 Mar 31 13:48 runtime_log
2025-03-31 15:48:10 (21276): Guest Log: -rw-------. 1 atlas atlas  122880 Mar 31 13:48 result.tar.gz
2025-03-31 15:48:10 (21276): Guest Log: -rw-r--r--. 1 atlas atlas   10821 Mar 31 13:48 runtime_log.err
2025-03-31 15:48:10 (21276): Guest Log: -rw-------. 1 atlas atlas     655 Mar 31 13:48 AV4MDmTQSJ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmyZpKDmr6qNBo.diag
2025-03-31 15:48:10 (21276): Guest Log: Looking for outputfile HITS.43634882._001431.pool.root.1
2025-03-31 15:48:10 (21276): Guest Log: No HITS file was produced
2025-03-31 15:48:10 (21276): Guest Log: Successfully finished the ATLAS job!
2025-03-31 15:48:10 (21276): Guest Log: Copying the results back to the shared directory!
2025-03-31 15:48:10 (21276): Guest Log:  *** Contents of shared directory: ***
2025-03-31 15:48:10 (21276): Guest Log: total 334924
2025-03-31 15:48:10 (21276): Guest Log: -rwxrwxrwx. 1 root root 342297655 Mar 31 13:35 ATLAS.root_0
2025-03-31 15:48:10 (21276): Guest Log: -rwxrwxrwx. 1 root root      9128 Mar 31 13:35 init_data.xml
2025-03-31 15:48:10 (21276): Guest Log: -rwxrwxrwx. 1 root root    507267 Mar 31 11:26 input.tar.gz
2025-03-31 15:48:10 (21276): Guest Log: -rwxrwxrwx. 1 root root    122880 Mar 31 13:48 result.tar.gz
2025-03-31 15:48:10 (21276): Guest Log: -rwxrwxrwx. 1 root root     17571 Mar 31 11:26 start_atlas.sh
2025-03-31 15:48:10 (21276): Guest Log:  *** Success! Shutting down the machine. ***
2025-03-31 15:48:10 (21276): VM Completion File Detected.
2025-03-31 15:48:10 (21276): Powering off VM.
2025-03-31 15:48:11 (21276): Successfully stopped VM.
2025-03-31 15:48:11 (21276): Deregistering VM. (boinc_602cfc0c409a545e, slot#0)
2025-03-31 15:48:11 (21276): Removing network bandwidth throttle group from VM.
2025-03-31 15:48:11 (21276): Removing VM from VirtualBox.
15:48:16 (21276): called boinc_finish(0)

</stderr_txt>
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