Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:35:27 (7517): wrapper (7.7.26015): starting
09:35:27 (7517): wrapper: running run_atlas (--nthreads 8)
[2025-04-01 09:35:27] Arguments: --nthreads 8
[2025-04-01 09:35:27] Threads: 8
[2025-04-01 09:35:27] Checking for CVMFS
[2025-04-01 09:35:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-01 09:35:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-01 09:35:28] Running cvmfs_config stat atlas.cern.ch
[2025-04-01 09:35:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-01 09:35:29] 2.11.2.0 16121 66923 76716 144360 1 257 16425394 25165824 1815 130560 0 24618828 99.931 16129202 5214 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-04-01 09:35:29] CVMFS is ok
[2025-04-01 09:35:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-01 09:35:29] Checking for apptainer binary...
[2025-04-01 09:35:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-01 09:35:29] Running /usr/bin/apptainer --version
[2025-04-01 09:35:29] apptainer version 1.3.2-1.el7
[2025-04-01 09:35:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-01 09:35:32] cg-vwn268.simple-grid.lan
[2025-04-01 09:35:32] apptainer works
[2025-04-01 09:35:32] Set ATHENA_PROC_NUMBER=8
[2025-04-01 09:35:32] Set ATHENA_CORE_NUMBER=8
[2025-04-01 09:35:32] Starting ATLAS job with PandaID=6581185061
[2025-04-01 09:35:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-01 16:38:02]  *** The last 200 lines of the pilot log: ***
[2025-04-01 16:38:02] 2025-04-01 14:34:50,419 | INFO     | intersect: -19408120920.47039
[2025-04-01 16:38:02] 2025-04-01 14:34:50,420 | INFO     | chi2: 7.597626824669332
[2025-04-01 16:38:02] 2025-04-01 14:34:50,420 | INFO     | model: linear, x: [1743493581.0, 1743493642.0, 1743493703.0, 1743493764.0, 1743493825.0, 1743493886.0, 1743493947.0, 1743494008.0, 1743494069.0, 1743494130.0, 1743
[2025-04-01 16:38:02] 2025-04-01 14:34:50,421 | INFO     | sum of square deviations: 19255784295.0
[2025-04-01 16:38:02] 2025-04-01 14:34:50,425 | INFO     | sum of deviations: 275664402495.50006
[2025-04-01 16:38:02] 2025-04-01 14:34:50,425 | INFO     | mean x: 1743505628.5
[2025-04-01 16:38:02] 2025-04-01 14:34:50,426 | INFO     | mean y: 2511185.6085858587
[2025-04-01 16:38:02] 2025-04-01 14:34:50,426 | INFO     | -- intersect: -24957388134.24375
[2025-04-01 16:38:02] 2025-04-01 14:34:50,426 | INFO     | intersect: -24957388134.24375
[2025-04-01 16:38:02] 2025-04-01 14:34:50,426 | INFO     | chi2: 5.990677581280321
[2025-04-01 16:38:02] 2025-04-01 14:34:50,426 | INFO     | current chi2=5.990677581280321 (change=21.15067349940486 %)
[2025-04-01 16:38:02] 2025-04-01 14:34:50,427 | INFO     | right removable region: 395
[2025-04-01 16:38:02] 2025-04-01 14:34:50,427 | INFO     | model: linear, x: [1743493886.0, 1743493947.0, 1743494008.0, 1743494069.0, 1743494130.0, 1743494191.0, 1743494252.0, 1743494313.0, 1743494374.0, 1743494435.0, 1743
[2025-04-01 16:38:02] 2025-04-01 14:34:50,427 | INFO     | sum of square deviations: 19255784295.0
[2025-04-01 16:38:02] 2025-04-01 14:34:50,442 | INFO     | sum of deviations: 97460082012.49998
[2025-04-01 16:38:02] 2025-04-01 14:34:50,443 | INFO     | mean x: 1743505933.5
[2025-04-01 16:38:02] 2025-04-01 14:34:50,443 | INFO     | mean y: 2526119.553030303
[2025-04-01 16:38:02] 2025-04-01 14:34:50,443 | INFO     | -- intersect: -8821951173.346058
[2025-04-01 16:38:02] 2025-04-01 14:34:50,443 | INFO     | intersect: -8821951173.346058
[2025-04-01 16:38:02] 2025-04-01 14:34:50,444 | INFO     | chi2: 3.9410676975051038
[2025-04-01 16:38:02] 2025-04-01 14:34:50,444 | INFO     | current chi2=3.9410676975051038 (change=48.12764842952616 %)
[2025-04-01 16:38:02] 2025-04-01 14:34:50,444 | INFO     | model: linear, x: [1743494191.0, 1743494252.0, 1743494313.0, 1743494374.0, 1743494435.0, 1743494496.0, 1743494557.0, 1743494618.0, 1743494679.0, 1743494740.0, 1743
[2025-04-01 16:38:02] 2025-04-01 14:34:50,445 | INFO     | sum of square deviations: 18535566140.0
[2025-04-01 16:38:02] 2025-04-01 14:34:50,449 | INFO     | sum of deviations: 18438640494.99999
[2025-04-01 16:38:02] 2025-04-01 14:34:50,449 | INFO     | mean x: 1743506086.0
[2025-04-01 16:38:02] 2025-04-01 14:34:50,449 | INFO     | mean y: 2542847.023017903
[2025-04-01 16:38:02] 2025-04-01 14:34:50,449 | INFO     | -- intersect: -1731846147.5069616
[2025-04-01 16:38:02] 2025-04-01 14:34:50,449 | INFO     | intersect: -1731846147.5069616
[2025-04-01 16:38:02] 2025-04-01 14:34:50,450 | INFO     | chi2: 2.588531760025435
[2025-04-01 16:38:02] 2025-04-01 14:34:50,450 | INFO     | current chi2=2.588531760025435 (change=34.31902320114655 %)
[2025-04-01 16:38:02] 2025-04-01 14:34:50,451 | INFO     | model: linear, x: [1743494496.0, 1743494557.0, 1743494618.0, 1743494679.0, 1743494740.0, 1743494801.0, 1743494862.0, 1743494923.0, 1743494984.0, 1743495045.0, 1743
[2025-04-01 16:38:02] 2025-04-01 14:34:50,451 | INFO     | sum of square deviations: 17833534372.5
[2025-04-01 16:38:02] 2025-04-01 14:34:50,481 | INFO     | sum of deviations: -38710730814.5
[2025-04-01 16:38:02] 2025-04-01 14:34:50,482 | INFO     | mean x: 1743506238.5
[2025-04-01 16:38:02] 2025-04-01 14:34:50,482 | INFO     | mean y: 2555230.2098445594
[2025-04-01 16:38:02] 2025-04-01 14:34:50,482 | INFO     | -- intersect: 3787133164.242418
[2025-04-01 16:38:02] 2025-04-01 14:34:50,482 | INFO     | intersect: 3787133164.242418
[2025-04-01 16:38:02] 2025-04-01 14:34:50,482 | INFO     | chi2: 1.7721573540312936
[2025-04-01 16:38:02] 2025-04-01 14:34:50,483 | INFO     | current chi2=1.7721573540312936 (change=31.538125921472943 %)
[2025-04-01 16:38:02] 2025-04-01 14:34:50,483 | INFO     | model: linear, x: [1743494801.0, 1743494862.0, 1743494923.0, 1743494984.0, 1743495045.0, 1743495106.0, 1743495167.0, 1743495228.0, 1743495289.0, 1743495350.0, 1743
[2025-04-01 16:38:02] 2025-04-01 14:34:50,483 | INFO     | sum of square deviations: 17149456430.0
[2025-04-01 16:38:02] 2025-04-01 14:34:50,488 | INFO     | sum of deviations: -47901572968.0
[2025-04-01 16:38:02] 2025-04-01 14:34:50,488 | INFO     | mean x: 1743506391.0
[2025-04-01 16:38:02] 2025-04-01 14:34:50,489 | INFO     | mean y: 2557276.125984252
[2025-04-01 16:38:02] 2025-04-01 14:34:50,489 | INFO     | -- intersect: 4872489973.384124
[2025-04-01 16:38:02] 2025-04-01 14:34:50,489 | INFO     | intersect: 4872489973.384124
[2025-04-01 16:38:02] 2025-04-01 14:34:50,489 | INFO     | chi2: 1.7505101493472246
[2025-04-01 16:38:02] 2025-04-01 14:34:50,490 | INFO     | current chi2=1.7505101493472246 (change=1.2215170754914093 %)
[2025-04-01 16:38:02] 2025-04-01 14:34:50,490 | INFO     | left removable region: 40
[2025-04-01 16:38:02] 2025-04-01 14:34:50,490 | INFO     | model: linear, x: [1743496021.0, 1743496082.0, 1743496143.0, 1743496204.0, 1743496265.0, 1743496326.0, 1743496387.0, 1743496448.0, 1743496509.0, 1743496570.0, 1743
[2025-04-01 16:38:02] 2025-04-01 14:34:50,490 | INFO     | sum of square deviations: 13872669410.0
[2025-04-01 16:38:02] 2025-04-01 14:34:50,494 | INFO     | sum of deviations: 19086102181.0
[2025-04-01 16:38:02] 2025-04-01 14:34:50,494 | INFO     | mean x: 1743506818.0
[2025-04-01 16:38:02] 2025-04-01 14:34:50,494 | INFO     | mean y: 2566308.61971831
[2025-04-01 16:38:02] 2025-04-01 14:34:50,495 | INFO     | -- intersect: -2396160879.2155876
[2025-04-01 16:38:02] 2025-04-01 14:34:50,495 | INFO     | intersect: -2396160879.2155876
[2025-04-01 16:38:02] 2025-04-01 14:34:50,504 | INFO     | chi2: 0.0014113442675105195
[2025-04-01 16:38:02] 2025-04-01 14:34:50,505 | INFO     | -- intersect: -2396160879.2155876
[2025-04-01 16:38:02] 2025-04-01 14:34:50,505 | INFO     | current memory leak: 1.38 B/s (using 355 data points, chi2=0.00)
[2025-04-01 16:38:02] 2025-04-01 14:34:50,506 | INFO     | ..............................
[2025-04-01 16:38:02] 2025-04-01 14:34:50,506 | INFO     | . Timing measurements:
[2025-04-01 16:38:02] 2025-04-01 14:34:50,506 | INFO     | . get job = 0 s
[2025-04-01 16:38:02] 2025-04-01 14:34:50,506 | INFO     | . initial setup = 4 s
[2025-04-01 16:38:02] 2025-04-01 14:34:50,506 | INFO     | . payload setup = 146 s
[2025-04-01 16:38:02] 2025-04-01 14:34:50,506 | INFO     | . stage-in = 0 s
[2025-04-01 16:38:02] 2025-04-01 14:34:50,507 | INFO     | . payload execution = 24552 s
[2025-04-01 16:38:02] 2025-04-01 14:34:50,507 | INFO     | . stage-out = 3 s
[2025-04-01 16:38:02] 2025-04-01 14:34:50,507 | INFO     | . log creation = 1 s
[2025-04-01 16:38:02] 2025-04-01 14:34:50,507 | INFO     | ..............................
[2025-04-01 16:38:02] 2025-04-01 14:34:50,974 | INFO     | 
[2025-04-01 16:38:02] 2025-04-01 14:34:50,974 | INFO     | job summary report
[2025-04-01 16:38:02] 2025-04-01 14:34:50,975 | INFO     | --------------------------------------------------
[2025-04-01 16:38:02] 2025-04-01 14:34:50,975 | INFO     | PanDA job id: 6581185061
[2025-04-01 16:38:02] 2025-04-01 14:34:50,975 | INFO     | task id: 43634882
[2025-04-01 16:38:02] 2025-04-01 14:34:50,975 | INFO     | errors: (none)
[2025-04-01 16:38:02] 2025-04-01 14:34:50,975 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-01 16:38:02] 2025-04-01 14:34:50,975 | INFO     | pilot state: finished 
[2025-04-01 16:38:02] 2025-04-01 14:34:50,975 | INFO     | transexitcode: 0
[2025-04-01 16:38:02] 2025-04-01 14:34:50,975 | INFO     | exeerrorcode: 0
[2025-04-01 16:38:02] 2025-04-01 14:34:50,975 | INFO     | exeerrordiag: 
[2025-04-01 16:38:02] 2025-04-01 14:34:50,976 | INFO     | exitcode: 0
[2025-04-01 16:38:02] 2025-04-01 14:34:50,976 | INFO     | exitmsg: OK
[2025-04-01 16:38:02] 2025-04-01 14:34:50,976 | INFO     | cpuconsumptiontime: 87969 s
[2025-04-01 16:38:02] 2025-04-01 14:34:50,976 | INFO     | nevents: 400
[2025-04-01 16:38:02] 2025-04-01 14:34:50,976 | INFO     | neventsw: 0
[2025-04-01 16:38:02] 2025-04-01 14:34:50,976 | INFO     | pid: 22510
[2025-04-01 16:38:02] 2025-04-01 14:34:50,976 | INFO     | pgrp: 22510
[2025-04-01 16:38:02] 2025-04-01 14:34:50,976 | INFO     | corecount: 8
[2025-04-01 16:38:02] 2025-04-01 14:34:50,976 | INFO     | event service: False
[2025-04-01 16:38:02] 2025-04-01 14:34:50,977 | INFO     | sizes: {0: 2410890, 1: 2411089, 12: 2411089, 22: 2411117, 33: 2411145, 44: 2411201, 55: 2411357, 65: 2411385, 76: 2411413, 87: 2411469, 98: 2411497, 99: 2412011, 1
[2025-04-01 16:38:02] 2025-04-01 14:34:50,977 | INFO     | --------------------------------------------------
[2025-04-01 16:38:02] 2025-04-01 14:34:50,977 | INFO     | 
[2025-04-01 16:38:02] 2025-04-01 14:34:50,977 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-04-01 16:38:02] 2025-04-01 14:34:51,447 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,447 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,447 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,447 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,447 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,447 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,448 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,448 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,449 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,449 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,449 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,449 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-01 16:38:02] 2025-04-01 14:34:51,449 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,449 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-01 16:38:02] 2025-04-01 14:34:51,449 | INFO     | job 6581185061 has completed (purged errors)
[2025-04-01 16:38:02] 2025-04-01 14:34:51,449 | INFO     | overall cleanup function is called
[2025-04-01 16:38:02] 2025-04-01 14:34:52,458 | INFO     | --- collectZombieJob: --- 10, [22510]
[2025-04-01 16:38:02] 2025-04-01 14:34:52,458 | INFO     | zombie collector waiting for pid 22510
[2025-04-01 16:38:02] 2025-04-01 14:34:52,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-01 16:38:02] 2025-04-01 14:34:52,459 | INFO     | collected zombie processes
[2025-04-01 16:38:02] 2025-04-01 14:34:52,459 | INFO     | will attempt to kill all subprocesses of pid=22510
[2025-04-01 16:38:02] 2025-04-01 14:34:53,339 | INFO     | process IDs to be killed: [22510] (in reverse order)
[2025-04-01 16:38:02] 2025-04-01 14:34:54,256 | WARNING  | found no corresponding commands to process id(s)
[2025-04-01 16:38:02] 2025-04-01 14:34:54,256 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-01 16:38:02] 2025-04-01 14:34:54,259 | INFO     | did not find any defunct processes belonging to 22510
[2025-04-01 16:38:02] 2025-04-01 14:34:54,262 | INFO     | did not find any defunct processes belonging to 22510
[2025-04-01 16:38:02] 2025-04-01 14:34:54,262 | INFO     | ready for new job
[2025-04-01 16:38:02] 2025-04-01 14:34:54,262 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-01 16:38:02] 2025-04-01 14:34:54,264 | INFO     | ***************************************
[2025-04-01 16:38:02] 2025-04-01 14:34:54,265 | INFO     | ***  PanDA Pilot version 3.10.0.24  ***
[2025-04-01 16:38:02] 2025-04-01 14:34:54,265 | INFO     | ***************************************
[2025-04-01 16:38:02] 2025-04-01 14:34:54,265 | INFO     | 
[2025-04-01 16:38:02] 2025-04-01 14:34:54,265 | INFO     | pilot is running in a VM
[2025-04-01 16:38:02] 2025-04-01 14:34:54,265 | INFO     | architecture information:
[2025-04-01 16:38:02] 2025-04-01 14:34:54,274 | INFO     | executing command: cat /etc/os-release
[2025-04-01 16:38:02] 2025-04-01 14:34:54,555 | INFO     | cat /etc/os-release:
[2025-04-01 16:38:02] NAME="CentOS Linux"
[2025-04-01 16:38:02] VERSION="7 (Core)"
[2025-04-01 16:38:02] ID="centos"
[2025-04-01 16:38:02] ID_LIKE="rhel fedora"
[2025-04-01 16:38:02] VERSION_ID="7"
[2025-04-01 16:38:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-01 16:38:02] ANSI_COLOR="0;31"
[2025-04-01 16:38:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-01 16:38:02] HOME_URL="https://www.centos.org/"
[2025-04-01 16:38:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-01 16:38:02] 
[2025-04-01 16:38:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-01 16:38:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-01 16:38:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-01 16:38:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-01 16:38:02] 
[2025-04-01 16:38:02] 2025-04-01 14:34:54,555 | INFO     | ***************************************
[2025-04-01 16:38:02] 2025-04-01 14:34:55,058 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-04-01 16:38:02] 2025-04-01 14:34:55,244 | INFO     | sufficient remaining disk space (387046178816 B)
[2025-04-01 16:38:02] 2025-04-01 14:34:55,244 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-01 16:38:02] 2025-04-01 14:34:55,244 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-01 16:38:02] 2025-04-01 14:34:55,297 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-01 16:38:02] 2025-04-01 14:34:55,426 | INFO     | all job control threads have been joined
[2025-04-01 16:38:02] 2025-04-01 14:34:55,656 | INFO     | found 0 job(s) in 20 queues
[2025-04-01 16:38:02] 2025-04-01 14:34:55,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-01 16:38:02] 2025-04-01 14:34:55,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-01 16:38:02] 2025-04-01 14:34:55,681 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-01 16:38:02] 2025-04-01 14:34:55,850 | INFO     | all data control threads have been joined
[2025-04-01 16:38:02] 2025-04-01 14:34:56,056 | INFO     | all payload control threads have been joined
[2025-04-01 16:38:02] 2025-04-01 14:34:56,238 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-01 16:38:02] 2025-04-01 14:34:56,238 | INFO     | aborting loop
[2025-04-01 16:38:02] 2025-04-01 14:34:56,250 | INFO     | [job] retrieve thread has finished
[2025-04-01 16:38:02] 2025-04-01 14:34:56,432 | INFO     | [job] control thread has finished
[2025-04-01 16:38:02] 2025-04-01 14:34:56,511 | INFO     | [payload] failed_post thread has finished
[2025-04-01 16:38:02] 2025-04-01 14:34:56,627 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-01 16:38:02] 2025-04-01 14:34:56,687 | INFO     | [job] queue monitor thread has finished
[2025-04-01 16:38:02] 2025-04-01 14:34:56,856 | INFO     | [data] control thread has finished
[2025-04-01 16:38:02] 2025-04-01 14:34:57,044 | INFO     | [payload] execute_payloads thread has finished
[2025-04-01 16:38:02] 2025-04-01 14:34:57,062 | INFO     | [payload] control thread has finished
[2025-04-01 16:38:02] 2025-04-01 14:34:57,069 | INFO     | [payload] validate_pre thread has finished
[2025-04-01 16:38:02] 2025-04-01 14:34:57,144 | INFO     | [data] copytool_in thread has finished
[2025-04-01 16:38:02] 2025-04-01 14:34:57,148 | INFO     | [job] validate thread has finished
[2025-04-01 16:38:02] 2025-04-01 14:34:57,243 | INFO     | [job] job monitor thread has finished
[2025-04-01 16:38:02] 2025-04-01 14:34:57,449 | INFO     | [payload] validate_post thread has finished
[2025-04-01 16:38:02] 2025-04-01 14:34:57,542 | INFO     | [job] create_data_payload thread has finished
[2025-04-01 16:38:02] 2025-04-01 14:34:57,699 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-01 16:38:02] 2025-04-01 14:34:58,634 | INFO     | [data] copytool_out thread has finished
[2025-04-01 16:38:02] 2025-04-01 14:34:59,306 | INFO     | [data] queue_monitor thread has finished
[2025-04-01 16:38:02] 2025-04-01 14:35:00,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140004157036352)>', '<ExcThread(monitor, started 140003434813184)>']
[2025-04-01 16:38:02] 2025-04-01 14:35:00,686 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-01 16:38:02] 2025-04-01 14:35:00,686 | INFO     | [monitor] control thread has ended
[2025-04-01 16:38:02] 2025-04-01 14:35:05,205 | INFO     | all workflow threads have been joined
[2025-04-01 16:38:02] 2025-04-01 14:35:05,205 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-01 16:38:02] 2025-04-01 14:35:05,206 | INFO     | traces error code: 0
[2025-04-01 16:38:02] 2025-04-01 14:35:05,206 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-01 16:38:02] 2025-04-01 14:35:05,466 [wrapper] ==== pilot stdout END ====
[2025-04-01 16:38:02] 2025-04-01 14:35:05,516 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-01 16:38:02] 2025-04-01 14:35:05,558 [wrapper] pilotpid: 11530
[2025-04-01 16:38:02] 2025-04-01 14:35:05,596 [wrapper] Pilot exit status: 0
[2025-04-01 16:38:02] 2025-04-01 14:35:05,897 [wrapper] pandaids: 6581185061
[2025-04-01 16:38:02] 2025-04-01 14:35:06,381 [wrapper] cleanup supervisor_pilot 27972 11531
[2025-04-01 16:38:02] 2025-04-01 14:35:06,501 [wrapper] Test setup, not cleaning
[2025-04-01 16:38:02] 2025-04-01 14:35:06,615 [wrapper] apfmon messages muted
[2025-04-01 16:38:02] 2025-04-01 14:35:06,723 [wrapper] ==== wrapper stdout END ====
[2025-04-01 16:38:02] 2025-04-01 14:35:06,826 [wrapper] ==== wrapper stderr END ====
[2025-04-01 16:38:02]  *** Error codes and diagnostics ***
[2025-04-01 16:38:02]     "exeErrorCode": 0,
[2025-04-01 16:38:02]     "exeErrorDiag": "",
[2025-04-01 16:38:02]     "pilotErrorCode": 0,
[2025-04-01 16:38:02]     "pilotErrorDiag": "",
[2025-04-01 16:38:02]  *** Listing of results directory ***
[2025-04-01 16:38:02] total 634020
[2025-04-01 16:38:02] -rw-r--r--. 1 boinc boinc    494584 Mar 31 12:49 pilot3.tar.gz
[2025-04-01 16:38:02] -rw-r--r--. 1 boinc boinc      5112 Mar 31 12:54 queuedata.json
[2025-04-01 16:38:02] -rwx------. 1 boinc boinc     37140 Mar 31 12:54 runpilot2-wrapper.sh
[2025-04-01 16:38:02] -rw-r--r--. 1 boinc boinc       100 Apr  1 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-01 16:38:02] -rwxr-xr-x. 1 boinc boinc      7986 Apr  1 09:35 run_atlas
[2025-04-01 16:38:02] -rw-r--r--. 1 boinc boinc       105 Apr  1 09:35 job.xml
[2025-04-01 16:38:02] -rw-r--r--. 1 boinc boinc      6315 Apr  1 09:35 init_data.xml
[2025-04-01 16:38:02] -rw-r--r--. 2 boinc boinc 345202065 Apr  1 09:35 EVNT.43634880._000513.pool.root.1
[2025-04-01 16:38:02] drwxrwx--x. 2 boinc boinc        68 Apr  1 09:35 shared
[2025-04-01 16:38:02] -rw-r--r--. 2 boinc boinc    507263 Apr  1 09:35 input.tar.gz
[2025-04-01 16:38:02] -rw-r--r--. 2 boinc boinc     17571 Apr  1 09:35 start_atlas.sh
[2025-04-01 16:38:02] -rw-r--r--. 1 boinc boinc         0 Apr  1 09:35 boinc_lockfile
[2025-04-01 16:38:02] -rw-r--r--. 1 boinc boinc      2616 Apr  1 09:35 pandaJob.out
[2025-04-01 16:38:02] -rw-------. 1 boinc boinc       424 Apr  1 09:35 setup.sh.local
[2025-04-01 16:38:02] -rw-------. 1 boinc boinc    987837 Apr  1 09:38 agis_schedconf.cvmfs.json
[2025-04-01 16:38:02] drwx------. 4 boinc boinc      4096 Apr  1 09:38 pilot3
[2025-04-01 16:38:02] -rw-------. 1 boinc boinc 294006725 Apr  1 16:31 HITS.43634882._000888.pool.root.1
[2025-04-01 16:38:02] -rw-r--r--. 1 boinc boinc       530 Apr  1 16:31 boinc_task_state.xml
[2025-04-01 16:38:02] -rw-------. 1 boinc boinc      1016 Apr  1 16:33 memory_monitor_summary.json
[2025-04-01 16:38:02] -rw-------. 1 boinc boinc   1599134 Apr  1 16:33 agis_ddmendpoints.agis.ALL.json
[2025-04-01 16:38:02] -rw-------. 1 boinc boinc    503905 Apr  1 16:33 log.43634882._000888.job.log.tgz.1
[2025-04-01 16:38:02] -rw-------. 1 boinc boinc        95 Apr  1 16:34 pilot_heartbeat.json
[2025-04-01 16:38:02] -rw-------. 1 boinc boinc      7694 Apr  1 16:34 heartbeat.json
[2025-04-01 16:38:02] -rw-------. 1 boinc boinc      4282 Apr  1 16:35 pilotlog.txt
[2025-04-01 16:38:02] -rw-------. 1 boinc boinc   2599365 Apr  1 16:35 log.43634882._000888.job.log.1
[2025-04-01 16:38:02] -rw-------. 1 boinc boinc       357 Apr  1 16:35 output.list
[2025-04-01 16:38:02] -rw-r--r--. 1 boinc boinc       620 Apr  1 16:35 runtime_log
[2025-04-01 16:38:02] -rw-------. 1 boinc boinc   3123200 Apr  1 16:35 result.tar.gz
[2025-04-01 16:38:02] -rw-------. 1 boinc boinc       658 Apr  1 16:35 zU0NDmYxRJ7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmyVpKDmKF9pqn.diag
[2025-04-01 16:38:02] -rw-r--r--. 1 boinc boinc     11014 Apr  1 16:35 runtime_log.err
[2025-04-01 16:38:02] -rw-r--r--. 1 boinc boinc      8192 Apr  1 16:38 boinc_mmap_file
[2025-04-01 16:38:02] -rw-r--r--. 1 boinc boinc        28 Apr  1 16:38 wrapper_checkpoint.txt
[2025-04-01 16:38:02] -rw-r--r--. 1 boinc boinc     21229 Apr  1 16:38 stderr.txt
[2025-04-01 16:38:02] HITS file was successfully produced:
[2025-04-01 16:38:02] -rw-------. 1 boinc boinc 294006725 Apr  1 16:31 shared/HITS.pool.root.1
[2025-04-01 16:38:02]  *** Contents of shared directory: ***
[2025-04-01 16:38:02] total 627796
[2025-04-01 16:38:02] -rw-r--r--. 2 boinc boinc 345202065 Apr  1 09:35 ATLAS.root_0
[2025-04-01 16:38:02] -rw-r--r--. 2 boinc boinc    507263 Apr  1 09:35 input.tar.gz
[2025-04-01 16:38:02] -rw-r--r--. 2 boinc boinc     17571 Apr  1 09:35 start_atlas.sh
[2025-04-01 16:38:02] -rw-------. 1 boinc boinc 294006725 Apr  1 16:31 HITS.pool.root.1
[2025-04-01 16:38:02] -rw-------. 1 boinc boinc   3123200 Apr  1 16:35 result.tar.gz
16:38:04 (7517): run_atlas exited; CPU time 87995.926479
16:38:04 (7517): called boinc_finish(0)

</stderr_txt>
]]>

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