Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2025-03-30 17:30:34 (10200): Detected: vboxwrapper 26206
2025-03-30 17:30:34 (10200): Detected: BOINC client v7.16.20
2025-03-30 17:30:35 (10200): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2025-03-30 17:30:35 (10200): Successfully copied 'init_data.xml' to the shared directory.
2025-03-30 17:30:36 (10200): Create VM. (boinc_2ca2db6b06eefe45, slot#6)
2025-03-30 17:30:36 (10200): Setting Memory Size for VM. (4700MB)
2025-03-30 17:30:36 (10200): Setting CPU Count for VM. (7)
2025-03-30 17:30:37 (10200): Setting Chipset Options for VM.
2025-03-30 17:30:37 (10200): Setting Graphics Controller Options for VM.
2025-03-30 17:30:37 (10200): Setting Boot Options for VM.
2025-03-30 17:30:37 (10200): Setting Network Configuration for NAT.
2025-03-30 17:30:38 (10200): Enabling VM Network Access.
2025-03-30 17:30:38 (10200): Disabling USB Support for VM.
2025-03-30 17:30:38 (10200): Disabling COM Port Support for VM.
2025-03-30 17:30:38 (10200): Disabling LPT Port Support for VM.
2025-03-30 17:30:39 (10200): Disabling Audio Support for VM.
2025-03-30 17:30:39 (10200): Disabling Clipboard Support for VM.
2025-03-30 17:30:39 (10200): Disabling Drag and Drop Support for VM.
2025-03-30 17:30:39 (10200): Adding storage controller(s) to VM.
2025-03-30 17:30:40 (10200): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-03-30 17:30:40 (10200): Adding VirtualBox Guest Additions to VM.
2025-03-30 17:30:40 (10200): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-03-30 17:30:41 (10200): forwarding host port 51356 to guest port 80
2025-03-30 17:30:41 (10200): Enabling remote desktop for VM.
2025-03-30 17:30:41 (10200): Required extension pack not installed, remote desktop not enabled.
2025-03-30 17:30:41 (10200): Enabling shared directory for VM.
2025-03-30 17:30:42 (10200): Starting VM using VBoxManage interface. (boinc_2ca2db6b06eefe45, slot#6)
2025-03-30 17:30:46 (10200): Successfully started VM. (PID = '9124')
2025-03-30 17:30:46 (10200): Reporting VM Process ID to BOINC.
2025-03-30 17:30:46 (10200): Guest Log: BIOS: VirtualBox 6.1.50
2025-03-30 17:30:46 (10200): Guest Log: CPUID EDX: 0x178bfbff
2025-03-30 17:30:46 (10200): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-03-30 17:30:46 (10200): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-03-30 17:30:46 (10200): VM state change detected. (old = 'poweredoff', new = 'running')
2025-03-30 17:30:46 (10200): Detected: Web Application Enabled (http://localhost:51356)
2025-03-30 17:30:46 (10200): Preference change detected
2025-03-30 17:30:46 (10200): Setting CPU throttle for VM. (100%)
2025-03-30 17:30:47 (10200): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-03-30 17:30:48 (10200): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-03-30 17:30:48 (10200): Guest Log: BIOS: Booting from Hard Disk...
2025-03-30 17:30:51 (10200): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-03-30 17:30:51 (10200): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-03-30 17:30:51 (10200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-03-30 17:30:56 (10200): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-03-30 17:30:56 (10200): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-03-30 17:31:01 (10200): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-03-30 17:31:01 (10200): Guest Log: 00:00:00.000119 main     Log opened 2025-03-30T17:31:00.189759000Z
2025-03-30 17:31:01 (10200): Guest Log: 00:00:00.000195 main     OS Product: Linux
2025-03-30 17:31:01 (10200): Guest Log: 00:00:00.000214 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-03-30 17:31:01 (10200): Guest Log: 00:00:00.000230 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-03-30 17:31:01 (10200): Guest Log: 00:00:00.000251 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-03-30 17:31:01 (10200): Guest Log: 00:00:00.000252 main     Process ID: 1348
2025-03-30 17:31:01 (10200): Guest Log: 00:00:00.000252 main     Package type: LINUX_64BITS_GENERIC
2025-03-30 17:31:01 (10200): Guest Log: 00:00:00.000863 main     5.2.32 r132073 started. Verbose level = 0
2025-03-30 17:31:02 (10200): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-03-30 17:31:02 (10200): Guest Log: [INFO] Mounting shared directory
2025-03-30 17:31:02 (10200): Guest Log: [INFO] Checking for init_data.xml
2025-03-30 17:31:04 (10200): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-03-30 17:31:04 (10200): Guest Log: [INFO] Detected branch: prod
2025-03-30 17:31:04 (10200): Guest Log: This is the prod version of the ATLAS job wrapper
2025-03-30 17:31:04 (10200): Guest Log: Copying input files
2025-03-30 17:31:06 (10200): Guest Log: Copied input files into RunAtlas.
2025-03-30 17:31:06 (10200): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-03-30 17:31:06 (10200): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-03-30 17:31:06 (10200): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-03-30 17:31:06 (10200): Guest Log: Further information can be found at the LHC@home message board.
2025-03-30 17:31:11 (10200): Guest Log: 00:00:10.003722 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 449 497 000ns (GuestNow=1 743 348 671 741 908 000 ns GuestLast=1 743 355 860 191 405 000 ns fSetTimeLastLoop=true )
2025-03-30 17:31:13 (10200): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-03-30 17:31:14 (10200): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-03-30 17:31:14 (10200): Guest Log: 2.6.3.0 1627 0 32180 144301 4 1 3117321 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-03-30 17:31:15 (10200): Guest Log: copied the webapp to /var/www
2025-03-30 17:31:15 (10200): Guest Log: ATHENA_PROC_NUMBER=7
2025-03-30 17:31:15 (10200): Guest Log: ATHENA_CORE_NUMBER=7
2025-03-30 17:31:15 (10200): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-03-30 17:31:15 (10200): Guest Log:  *** Starting ATLAS job. (PandaID=6564765670 taskID=43634914) ***
2025-03-30 19:10:52 (10200): Status Report: Elapsed Time: '6000.000000'
2025-03-30 19:10:52 (10200): Status Report: CPU Time: '35463.390625'
2025-03-30 19:50:04 (10200): Guest Log:  *** Job finished ***
2025-03-30 19:50:04 (10200): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:45,914 | INFO     | [data] queue_monitor thread has finished
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:50,402 | INFO     | job.realtimelogging is not enabled
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:51,420 | INFO     | [payload] run_realtimelog thread has finished
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:53,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140711748671296)>', '<ExcThread(monitor, started 140710560913152)>']
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:54,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:54,470 | INFO     | [monitor] control thread has ended
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:58,311 | INFO     | all workflow threads have been joined
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:58,312 | INFO     | end of generic workflow (traces error code: 0)
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:58,312 | INFO     | traces error code: 0
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:58,312 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:58,384 [wrapper] ==== pilot stdout END ====
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:58,389 [wrapper] ==== wrapper stdout RESUME ====
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:58,404 [wrapper] pilotpid: 5983
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:58,408 [wrapper] Pilot exit status: 0
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:58,518 [wrapper] pandaids: 6564765670
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:58,545 [wrapper] cleanup supervisor_pilot  7284 5984
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:58,550 [wrapper] Test setup, not cleaning
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:58,554 [wrapper] apfmon messages muted
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:58,558 [wrapper] ==== wrapper stdout END ====
2025-03-30 19:50:04 (10200): Guest Log: 2025-03-30 17:49:58,565 [wrapper] ==== wrapper stderr END ====
2025-03-30 19:50:04 (10200): Guest Log:  *** Error codes and diagnostics ***
2025-03-30 19:50:04 (10200): Guest Log:     "exeErrorCode": 0,
2025-03-30 19:50:04 (10200): Guest Log:     "exeErrorDiag": "",
2025-03-30 19:50:04 (10200): Guest Log:     "pilotErrorCode": 0,
2025-03-30 19:50:04 (10200): Guest Log:     "pilotErrorDiag": "",
2025-03-30 19:50:04 (10200): Guest Log:  *** Listing of results directory ***
2025-03-30 19:50:04 (10200): Guest Log: total 320356
2025-03-30 19:50:04 (10200): Guest Log: -rw-r--r--. 1 atlas atlas    494584 Mar 21 13:53 pilot3.tar.gz
2025-03-30 19:50:04 (10200): Guest Log: -rwx------. 1 atlas atlas     37140 Mar 21 14:15 runpilot2-wrapper.sh
2025-03-30 19:50:04 (10200): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Mar 21 14:15 queuedata.json
2025-03-30 19:50:04 (10200): Guest Log: -rwxr-xr-x. 1 atlas atlas      8817 Mar 30 15:31 init_data.xml
2025-03-30 19:50:04 (10200): Guest Log: -rwxr-xr-x. 1 atlas atlas     17571 Mar 30 15:31 start_atlas.sh
2025-03-30 19:50:04 (10200): Guest Log: -rwxr-xr-x. 1 atlas atlas    507263 Mar 30 15:31 input.tar.gz
2025-03-30 19:50:04 (10200): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar 30 15:31 EVNT.43634912._000133.pool.root.1 -> /data/./ATLAS.root_0
2025-03-30 19:50:04 (10200): Guest Log: -rw-r--r--. 1 atlas atlas      2618 Mar 30 15:31 pandaJob.out
2025-03-30 19:50:04 (10200): Guest Log: -rw-------. 1 atlas atlas       424 Mar 30 15:31 setup.sh.local
2025-03-30 19:50:04 (10200): Guest Log: -rw-------. 1 atlas atlas    990829 Mar 30 15:32 agis_schedconf.cvmfs.json
2025-03-30 19:50:04 (10200): Guest Log: -rw-------. 1 atlas atlas   1599134 Mar 30 15:32 agis_ddmendpoints.agis.ALL.json
2025-03-30 19:50:04 (10200): Guest Log: drwx------. 4 atlas atlas      4096 Mar 30 15:32 pilot3
2025-03-30 19:50:04 (10200): Guest Log: -rw-------. 1 atlas atlas 322227417 Mar 30 17:48 HITS.43634914._015829.pool.root.1
2025-03-30 19:50:04 (10200): Guest Log: -rw-------. 1 atlas atlas        95 Mar 30 17:49 pilot_heartbeat.json
2025-03-30 19:50:04 (10200): Guest Log: -rw-------. 1 atlas atlas      1026 Mar 30 17:49 memory_monitor_summary.json
2025-03-30 19:50:04 (10200): Guest Log: -rw-------. 1 atlas atlas    328710 Mar 30 17:49 log.43634914._015829.job.log.tgz.1
2025-03-30 19:50:04 (10200): Guest Log: -rw-------. 1 atlas atlas      7704 Mar 30 17:49 heartbeat.json
2025-03-30 19:50:04 (10200): Guest Log: -rw-------. 1 atlas atlas      4474 Mar 30 17:49 pilotlog.txt
2025-03-30 19:50:04 (10200): Guest Log: -rw-------. 1 atlas atlas    698849 Mar 30 17:49 log.43634914._015829.job.log.1
2025-03-30 19:50:04 (10200): Guest Log: -rw-------. 1 atlas atlas       357 Mar 30 17:49 output.list
2025-03-30 19:50:04 (10200): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar 30 17:49 runtime_log
2025-03-30 19:50:04 (10200): Guest Log: -rw-------. 1 atlas atlas   1044480 Mar 30 17:49 result.tar.gz
2025-03-30 19:50:04 (10200): Guest Log: -rw-r--r--. 1 atlas atlas     10936 Mar 30 17:49 runtime_log.err
2025-03-30 19:50:04 (10200): Guest Log: -rw-------. 1 atlas atlas       654 Mar 30 17:49 lAvLDm0KsF7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmz67KDmyqJiKn.diag
2025-03-30 19:50:04 (10200): Guest Log: Looking for outputfile HITS.43634914._015829.pool.root.1
2025-03-30 19:50:04 (10200): Guest Log: HITS file was successfully produced
2025-03-30 19:50:04 (10200): Guest Log: -rw-------. 1 atlas atlas 322227417 Mar 30 17:48 /home/atlas/RunAtlas/HITS.43634914._015829.pool.root.1
2025-03-30 19:50:05 (10200): Guest Log: Successfully finished the ATLAS job!
2025-03-30 19:50:05 (10200): Guest Log: Copying the results back to the shared directory!
2025-03-30 19:50:05 (10200): Guest Log:  *** Contents of shared directory: ***
2025-03-30 19:50:05 (10200): Guest Log: total 667460
2025-03-30 19:50:05 (10200): Guest Log: -rwxrwxrwx. 1 root root 359665639 Mar 30 15:30 ATLAS.root_0
2025-03-30 19:50:05 (10200): Guest Log: -rwxrwxrwx. 1 root root 322227417 Mar 30  2025 HITS.pool.root.1
2025-03-30 19:50:05 (10200): Guest Log: -rwxrwxrwx. 1 root root      8817 Mar 30 15:30 init_data.xml
2025-03-30 19:50:05 (10200): Guest Log: -rwxrwxrwx. 1 root root    507263 Mar 30 08:44 input.tar.gz
2025-03-30 19:50:05 (10200): Guest Log: -rwxrwxrwx. 1 root root   1044480 Mar 30  2025 result.tar.gz
2025-03-30 19:50:05 (10200): Guest Log: -rwxrwxrwx. 1 root root     17571 Mar 30 08:44 start_atlas.sh
2025-03-30 19:50:05 (10200): Guest Log:  *** Success! Shutting down the machine. ***
2025-03-30 19:50:05 (10200): VM Completion File Detected.
2025-03-30 19:50:05 (10200): Powering off VM.
2025-03-30 19:50:06 (10200): Successfully stopped VM.
2025-03-30 19:50:06 (10200): Deregistering VM. (boinc_2ca2db6b06eefe45, slot#6)
2025-03-30 19:50:06 (10200): Removing network bandwidth throttle group from VM.
2025-03-30 19:50:06 (10200): Removing VM from VirtualBox.
19:50:11 (10200): called boinc_finish(0)

</stderr_txt>
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